View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0542_low_32 (Length: 280)
Name: NF0542_low_32
Description: NF0542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0542_low_32 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 26088331 - 26088558
Alignment:
Q |
1 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26088331 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
26088430 |
T |
 |
Q |
101 |
ctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcgactcactgtggttggaactcgattcttgaaagc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
26088431 |
ctatatcatatggaattgggcaccacaacttctgatattggatcatcctgcaacaggagggattgtgactcactgtggttggaactcgattcttgaaagc |
26088530 |
T |
 |
Q |
201 |
ttgaatgctggtttgccaatgatcgcat |
228 |
Q |
|
|
|||||||||||||||||||||||||||| |
|
|
T |
26088531 |
ttgaatgctggtttgccaatgatcgcat |
26088558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 26112119 - 26112346
Alignment:
Q |
1 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
100 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26112119 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
26112218 |
T |
 |
Q |
101 |
ctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcgactcactgtggttggaactcgattcttgaaagc |
200 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
26112219 |
ctatatcatatggaattgggcaccacaacttctgatattggatcatcctgcaacaggagggattgtgactcactgtggttggaactcgattcttgaaagc |
26112318 |
T |
 |
Q |
201 |
ttgaatgctggtttgccaatgatcgcat |
228 |
Q |
|
|
|||||||||||||||||||||||||||| |
|
|
T |
26112319 |
ttgaatgctggtttgccaatgatcgcat |
26112346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 26155737 - 26155959
Alignment:
Q |
1 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
100 |
Q |
|
|
||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
26155737 |
gtcataattttatctgggttgtaaggaaaaaggagagcgatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
26155836 |
T |
 |
Q |
101 |
ctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcgactcactgtggttggaactcgattcttgaaagc |
200 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||| |
|
|
T |
26155837 |
atatatcatatggaattgggcaccacagcttctgatattggatcaccctgcaacaggagggattgtgactcactgtggttggaactcaactctcgaaagc |
26155936 |
T |
 |
Q |
201 |
ttgaatgctggtttgccaatgat |
223 |
Q |
|
|
|||||| |||||||||||||||| |
|
|
T |
26155937 |
ttgaattctggtttgccaatgat |
26155959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 26191814 - 26192039
Alignment:
Q |
1 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
100 |
Q |
|
|
||||||||||||||||||||||||||||| |||| | ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
T |
26191814 |
gtcataattttatctgggttgtaaggaaaaatgatatggatgagagtgaaaacagtttcctacaagattttgagggaaggatgaaagaaagcaaaaaggg |
26191913 |
T |
 |
Q |
101 |
ctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcgactcactgtggttggaactcgattcttgaaagc |
200 |
Q |
|
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| |
|
|
T |
26191914 |
ctatatcatatggaattgggcaccacagcttcagatattggatcaccctgcaacaggtggaattgtgactcactgtggttggaactcgattcttgaaagc |
26192013 |
T |
 |
Q |
201 |
ttgaatgctggtttgccaatgatcgc |
226 |
Q |
|
|
|||||||||||||||||||||||||| |
|
|
T |
26192014 |
ttgaatgctggtttgccaatgatcgc |
26192039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 19103145 - 19102922
Alignment:
Q |
1 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
100 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| || ||||||||||||| |||||||||||||||||||||||| |
|
|
T |
19103145 |
gtcataattttatctgggttgtaaggaaaaatgagagagatgagagtgaaaacagttttctacaagattttgaggcaaggatgaaagaaagcaaaaaggg |
19103046 |
T |
 |
Q |
101 |
ctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcgactcactgtggttggaactcgattcttgaaagc |
200 |
Q |
|
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |
|
|
T |
19103045 |
atatatcatatggaattgggcaccgcaacttctgatattggatcaccctgcaacaggagggattgtgactcactgtggttggaactcaattctcgaaagc |
19102946 |
T |
 |
Q |
201 |
ttgaatgctggtttgccaatgatc |
224 |
Q |
|
|
|||||| | ||||||||||||||| |
|
|
T |
19102945 |
ttgaattcgggtttgccaatgatc |
19102922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 26129116 - 26129338
Alignment:
Q |
1 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
100 |
Q |
|
|
||||||||||||| ||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
|
|
T |
26129116 |
gtcataattttatatgggttgtaaggaaaaaggagagcgatgagagtgaaaacaatttccttcaagattttgaggaaaggatgaaagaaagaaaaaaggg |
26129215 |
T |
 |
Q |
101 |
ctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcgactcactgtggttggaactcgattcttgaaagc |
200 |
Q |
|
|
||||||||||||||||||||||||||| || || ||||||||||||||||| | |||||| |||| |||||| |||||||||||||| | ||| |||||| |
|
|
T |
26129216 |
ctatatcatatggaattgggcaccacagctccttatattggatcaccctgccataggaggaattgtgactcattgtggttggaactcaactctcgaaagc |
26129315 |
T |
 |
Q |
201 |
ttgaatgctggtttgccaatgat |
223 |
Q |
|
|
|| |||||||||||||||||||| |
|
|
T |
26129316 |
ttaaatgctggtttgccaatgat |
26129338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 26186792 - 26187020
Alignment:
Q |
2 |
tcataattttatctgggttgtaa-------ggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaa |
94 |
Q |
|
|
||||||||||||||||||||||| ||||| | || || ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||| |
|
|
T |
26186792 |
tcataattttatctgggttgtaacttataaggaaaaaggaaagagatgagagtgaaaacactttcctacaagattttgag-aaagaatgaaagaaagcaa |
26186890 |
T |
 |
Q |
95 |
aaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcgactcactgtggttggaactcgattctt |
194 |
Q |
|
|
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |
|
|
T |
26186891 |
aaagggatatatcatatggaattgggcaccacagcttctgatattggatcaccctgcaacaggagggattgtgactcactgttgttggaactcaattctg |
26186990 |
T |
 |
Q |
195 |
gaaagcttgaatgctggtttgccaatgatc |
224 |
Q |
|
|
|||||| |||| | ||||||||||||||| |
|
|
T |
26186991 |
gaaagcgtgaactcgggtttgccaatgatc |
26187020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 65 - 223
Target Start/End: Original strand, 26204498 - 26204656
Alignment:
Q |
65 |
agattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggatt |
164 |
Q |
|
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| |
|
|
T |
26204498 |
agattttgagaaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggccccacagcttctgatattggatcaccctgcaacaggaggaatt |
26204597 |
T |
 |
Q |
165 |
gcgactcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgat |
223 |
Q |
|
|
| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
T |
26204598 |
gtgactcactgtggttggaactcaattcttgaaagcttgaattctggtttgccaatgat |
26204656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 26224139 - 26224293
Alignment:
Q |
69 |
tttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcga |
168 |
Q |
|
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| || |
|
|
T |
26224139 |
tttgagaaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggccccacagcttctgatattggatcaccctgcaacaggaggaattgtga |
26224238 |
T |
 |
Q |
169 |
ctcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgat |
223 |
Q |
|
|
||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
T |
26224239 |
ctcactgtggttggaactcaattcttgaaagcttgaattctggtttgccaatgat |
26224293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 26302413 - 26302581
Alignment:
Q |
56 |
tttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaaca |
155 |
Q |
|
|
|||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |
|
|
T |
26302413 |
tttcctgcaagtatttgaggaaaggatgaaagaaagcaaaaaaggctatatcatatggaattgggcaccgcagcttctaatattggatcaccctgcaaca |
26302512 |
T |
 |
Q |
156 |
ggagggattgcgactcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgatc |
224 |
Q |
|
|
|||||||||| |||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
26302513 |
ggagggattgtgactcactgttgttggaactcaattctcgaaagcttgaatgctggtttgccaatgatc |
26302581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 26251465 - 26251620
Alignment:
Q |
69 |
tttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcga |
168 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |
|
|
T |
26251465 |
tttgaggaaaggatgaaagaaagcaacaagggctatatcatctggaattgggcaccacaacttctgatattggatcaccctgcaacaggaggaattgtga |
26251564 |
T |
 |
Q |
169 |
ctcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgatc |
224 |
Q |
|
|
|||| |||||||||||||| | |||||||||||| ||||||||||||||||||||| |
|
|
T |
26251565 |
ctcattgtggttggaactcaactcttgaaagcttaaatgctggtttgccaatgatc |
26251620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 26179687 - 26179855
Alignment:
Q |
56 |
tttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaaca |
155 |
Q |
|
|
|||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
T |
26179687 |
tttcctgcaagaatttgaggaaaggttgaaagaaagcaaaaagggctatatcatatggaattgggcatcacaacttctgatattagatcaccctgcaaca |
26179786 |
T |
 |
Q |
156 |
ggagggattgcgactcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgatc |
224 |
Q |
|
|
|||||||||| ||||||||||||||||||||| ||||||||||| |||| | ||||||||||||||| |
|
|
T |
26179787 |
ggagggattgtgactcactgtggttggaactcaattcttgaaagtgtgaactcgggtttgccaatgatc |
26179855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 26260480 - 26260648
Alignment:
Q |
60 |
cttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggag |
159 |
Q |
|
|
||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||| |
|
|
T |
26260480 |
cttcatgattttgagcaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacagctccttatattggatcaccctgcaacaggag |
26260579 |
T |
 |
Q |
160 |
ggattgcgactcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgatcgcat |
228 |
Q |
|
|
|||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| |||| |
|
|
T |
26260580 |
ggattgtgactcactgtggatggaactcaattcttgaaagcttgaactcgggtttgccaatgattgcat |
26260648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 26243004 - 26243171
Alignment:
Q |
56 |
tttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaaca |
155 |
Q |
|
|
|||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||| |
|
|
T |
26243004 |
tttcctgcaagaatttgaggaaaggatgaaagaaagcaacaagggctatatcatatgggactgggcaccgcaacttctgatattggatcacccagcaaca |
26243103 |
T |
 |
Q |
156 |
ggagggattgcgactcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgat |
223 |
Q |
|
|
|||| |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
T |
26243104 |
agaggaattgtgactcactgtggttggaactcaattcttgaaagcttgaattctggtttgccaatgat |
26243171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 26298059 - 26298220
Alignment:
Q |
63 |
caagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggaggga |
162 |
Q |
|
|
||||| |||||||||||||| |||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||||||| | |
|
|
T |
26298059 |
caagaatttgaggaaaggattaaagaaagcagcaagggctatatcatatgggactgggcaccgcaacttctgatattggaccaccctgcaacaggaggaa |
26298158 |
T |
 |
Q |
163 |
ttgcgactcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgatc |
224 |
Q |
|
|
||| |||||| |||||||||||||| | ||| |||||||||||||||||||||||||||||| |
|
|
T |
26298159 |
ttgtgactcattgtggttggaactcaactctcgaaagcttgaatgctggtttgccaatgatc |
26298220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 26278300 - 26278468
Alignment:
Q |
56 |
tttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaaca |
155 |
Q |
|
|
|||||| ||||| |||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||| |
|
|
T |
26278300 |
tttcctgcaagaatttgagaaaaggatgaaagaaagcaacaagggctacatcatatgggattgggcaccacaactgctgatattggaataccctgcaatc |
26278399 |
T |
 |
Q |
156 |
ggagggattgcgactcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaatgatc |
224 |
Q |
|
|
|||||||||| |||||| |||||||||||||| | |||||||||| | ||||||||||||||||||||| |
|
|
T |
26278400 |
ggagggattgtgactcattgtggttggaactcaactcttgaaagcgtaaatgctggtttgccaatgatc |
26278468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 26227586 - 26227740
Alignment:
Q |
66 |
gattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattg |
165 |
Q |
|
|
|||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||||| |||| | | |
|
|
T |
26227586 |
gattttaagcaaaggatgaaagaaaacaaaaagggatatatcatatggaattgggcaccacaacttctcatattaggtcaccctgcaacagcaggggtag |
26227685 |
T |
 |
Q |
166 |
cgactcactgtggttggaactcgattcttgaaagcttgaatgctggtttgccaat |
220 |
Q |
|
|
|||||| |||||||||||||| |||||||||||||||| || | |||||||||| |
|
|
T |
26227686 |
tgactcattgtggttggaactcaattcttgaaagcttgagtgttagtttgccaat |
26227740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 26208023 - 26208159
Alignment:
Q |
64 |
aagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggat |
163 |
Q |
|
|
|||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||| |
|
|
T |
26208023 |
aagattttaagcaaaggatgaaagaaaacaaaaagggatatatcatatggaattgggcaccacagcttctcatattaggccaccctgcaacaggagggat |
26208122 |
T |
 |
Q |
164 |
tgcgactcactgtggttggaactcgattcttgaaagc |
200 |
Q |
|
|
| |||||| ||||||||||| || |||||||||||| |
|
|
T |
26208123 |
agtgactcattgtggttggaattcaattcttgaaagc |
26208159 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 44903802 - 44904025
Alignment:
Q |
1 |
gtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaaggg |
100 |
Q |
|
|
||||||||||||||||||||||||||||| |||| || || |||| || | |||||| |||||||||||||||||| ||||||||||||| ||||| |
|
|
T |
44903802 |
gtcataattttatctgggttgtaaggaaaaatgatagagacgagaacgaggaaggtttcctgcaagattttgaggaaagggtgaaagaaagcaacaaggg |
44903901 |
T |
 |
Q |
101 |
ctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacaggagggattgcgactcactgtggttggaactcgattcttgaaagc |
200 |
Q |
|
|
|||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| | |||||||||| |
|
|
T |
44903902 |
ctatatcatatggaattgggcaccgcagcttctcatattggatcaccctgcaacaggaggaattgtgactcactgtggttggaactcaactcttgaaagc |
44904001 |
T |
 |
Q |
201 |
ttgaatgctggtttgccaatgatc |
224 |
Q |
|
|
| | || |||||||||||||||| |
|
|
T |
44904002 |
attagtgttggtttgccaatgatc |
44904025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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