View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0543-Insertion-7 (Length: 318)
Name: NF0543-Insertion-7
Description: NF0543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0543-Insertion-7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 6 - 318
Target Start/End: Original strand, 48454904 - 48455216
Alignment:
| Q |
6 |
caattgcatcccgctactcaagtattttctacgtaaatgtattccctacgtcagatagtggcctgcaagaagatttcaatcatctgatcgtgattgctgt |
105 |
Q |
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| T |
48454904 |
caattgcatcccgctactcaagtattttctacgtaaatgtattccctacgtcagatagtggcctgcaagaagatttcaatcatctgatcgtgattgctgt |
48455003 |
T |
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| Q |
106 |
tctacaatgttctaaattctttgttgagcatcaaatctagaccatttgatttcaatcaaatggctccaacgcattgacgatagaattccctgaccgtaga |
205 |
Q |
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| T |
48455004 |
tctacaatgttctaaattctttgttgagcatcaaatctagaccatttgatttcaatcaaatggctccaatgcattgacgatagaattccctgaccgtaga |
48455103 |
T |
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| Q |
206 |
gaatctgggtccctctctaatagcatccaacctacaatccaacaccttccattggaattccctggccttaagtatggaacttatgtgtatatatcactca |
305 |
Q |
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| T |
48455104 |
gaatctgggtccctctctaatagcatccaacctacaatccaacaccttccattggaattccctggccttaagtatggaacttatgtgtatatatcactca |
48455203 |
T |
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| Q |
306 |
ttttgaccctttt |
318 |
Q |
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| T |
48455204 |
ttttgaccctttt |
48455216 |
T |
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