View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0544_high_14 (Length: 371)

Name: NF0544_high_14
Description: NF0544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0544_high_14
NF0544_high_14
[»] chr6 (17 HSPs)
chr6 (94-300)||(33285416-33285622)
chr6 (95-259)||(33262449-33262610)
chr6 (95-259)||(33304307-33304468)
chr6 (95-259)||(33644564-33644725)
chr6 (94-254)||(28870198-28870355)
chr6 (179-259)||(33398958-33399038)
chr6 (172-259)||(9166649-9166736)
chr6 (179-259)||(33271690-33271776)
chr6 (164-259)||(33409861-33409956)
chr6 (95-251)||(33387977-33388130)
chr6 (179-259)||(33057470-33057550)
chr6 (179-225)||(33358800-33358846)
chr6 (95-134)||(33271618-33271657)
chr6 (95-134)||(33409801-33409840)
chr6 (95-137)||(9166584-9166626)
chr6 (95-129)||(33398895-33398929)
chr6 (95-136)||(33057401-33057442)
[»] scaffold1408 (1 HSPs)
scaffold1408 (95-259)||(467-628)
[»] scaffold0428 (1 HSPs)
scaffold0428 (95-259)||(6213-6374)
[»] chr4 (8 HSPs)
chr4 (97-259)||(31479032-31479191)
chr4 (172-259)||(31157123-31157210)
chr4 (179-255)||(31148192-31148268)
chr4 (172-259)||(31472571-31472661)
chr4 (97-136)||(31499199-31499238)
chr4 (97-135)||(31472695-31472733)
chr4 (179-252)||(31504224-31504297)
chr4 (97-136)||(31148122-31148161)
[»] chr2 (2 HSPs)
chr2 (179-259)||(17440904-17440984)
chr2 (95-137)||(17441011-17441053)
[»] chr7 (1 HSPs)
chr7 (97-129)||(6785526-6785558)


Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 94 - 300
Target Start/End: Original strand, 33285416 - 33285622
Alignment:
Q  94 aatccaacttggtatttcacttcctggagtaacaatatgaatcccttcaaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatc 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33285416 aatccaacttggtatttcacttcctggagtaacaatatgaatcccttcaaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatc 33285515  T
Q  194 catgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaattgtgtaacttttctaggaaaaaggtcatgaaact 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33285516 catgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaattgtgtaacttttctagtaaaaaggtcatgaaact 33285615  T
Q  294 tgttgtt 300  Q
    |||||||    
T  33285616 tgttgtt 33285622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 95 - 259
Target Start/End: Original strand, 33262449 - 33262610
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatcccttc-aaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatc 193  Q
    |||||||||||||||||| |||||||| ||||||| |||| | | || ||||||| |    |||||  | ||||||||||| || ||||||||| || ||    
T  33262449 atccaacttggtatttcatttcctggactaacaatttgaaactcatccaaataagta----gggtaggattgttggtatgcttgaatgaattgtgtcgtc 33262544  T
Q  194 catgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  33262545 catgaaaatgtcatgctactgcaacgttccctctcacccaattttggacagttgaaaatgaccaat 33262610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 95 - 259
Target Start/End: Original strand, 33304307 - 33304468
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatcccttcaaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatcc 194  Q
    |||||| ||||||||||| |||||||||||||||| |||||||  |||||   ||||| ||||||  | |||  || |||||  ||||||||| ||| ||    
T  33304307 atccaaattggtatttcatttcctggagtaacaatttgaatccaatcaaa---ggacgtagggtaggattgtgagtttgcctcaatgaattgtgtcaacc 33304403  T
Q  195 atgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  33304404 atgaaaatgtcatgctactgcaacgttccctctcacccaattttggacagttgaaaatgaacaat 33304468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 95 - 259
Target Start/End: Complemental strand, 33644725 - 33644564
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatcccttcaaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatcc 194  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||  |||||  |||  |   ||||  | ||| ||| |||||| ||||||||||||||||    
T  33644725 atccaacttggtatttcacttcctggagttacaatttgagtcctatcaaagtaggttg---ggtaggattgtaggtttgcctgaatgaattgtatcatcc 33644629  T
Q  195 atgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    ||||||||| |||||| |||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  33644628 atgaaaatgtcatgctcctgcaacgttccctctcacccaattttgaacagttgaaaatgaccaat 33644564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 94 - 254
Target Start/End: Complemental strand, 28870355 - 28870198
Alignment:
Q  94 aatccaacttggtatttcacttcctggagtaacaatatgaatcccttc-aaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcat 192  Q
    |||||||||||||||||||||||||||||||||||||| || | | || |||||  |||  | ||||  | ||| |||||||| | ||||||||| ||||    
T  28870355 aatccaacttggtatttcacttcctggagtaacaatattaaacgcatccaaata--gac--aaggtaggattgtcggtatgcccgaatgaattgtttcat 28870260  T
Q  193 ccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatga 254  Q
    ||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||||    
T  28870259 ccatgaaaatgccatgctacaacaacgttccctctcacctaaatttggacagttgaaaatga 28870198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 33398958 - 33399038
Alignment:
Q  179 atgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  33398958 atgaattgtatcatccatgaaaatgtcatgctactgcaacgttccctctcacccaattttgaacagttgaaaatgaccaat 33399038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 9166649 - 9166736
Alignment:
Q  172 tgcctggatgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    |||||| || ||||| |||||||||||||||| ||||||||||||| ||||| | ||||  |||| ||||||||||||||||||||||    
T  9166649 tgcctgaataaattgcatcatccatgaaaatgtcatgctactgcaatgttccttatcactcaattctggacagttgaaaatgaccaat 9166736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 33271690 - 33271776
Alignment:
Q  179 atgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcac------ctaattttggacagttgaaaatgaccaat 259  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| ||||      | |||||||||||||||||||||||||||    
T  33271690 atgaattgtatcatccatgaaaatgtcaagctactgcaacgttccctctcacagtcagccaattttggacagttgaaaatgaccaat 33271776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 33409861 - 33409956
Alignment:
Q  164 tgttggtatgcctggatgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    ||||||| |||||| ||||| |||  ||||||||||| ||  |||||||||||||||||||| ||| | |||||||||||||||||||||| ||||    
T  33409861 tgttggtttgcctgaatgaaatgtgccatccatgaaattgtgatgctactgcaacgttccctctcaaccaattttggacagttgaaaatgaacaat 33409956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 95 - 251
Target Start/End: Original strand, 33387977 - 33388130
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatcccttcaaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatcc 194  Q
    |||||||| |||||||||||||||| ||||||||| ||||||   |||||  |||   |||||||    ||| ||| |||||  || |||||| ||||||    
T  33387977 atccaactcggtatttcacttcctgtagtaacaatttgaatcgtatcaaaatagg---cagggtaggtttgtcggtttgccttaataaattgtgtcatcc 33388073  T
Q  195 atgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaa 251  Q
    ||||||||| ||||||||||||||  ||||| ||||| | |||||||||||||||||    
T  33388074 atgaaaatgtcatgctactgcaacactccctatcacccagttttggacagttgaaaa 33388130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 33057470 - 33057550
Alignment:
Q  179 atgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    ||||||||| |||||||| ||| || |||||| |||||| ||||||| ||||| |||||||||||||||||||||| ||||    
T  33057470 atgaattgtttcatccataaaagtgtcatgctcctgcaatgttccctctcacccaattttggacagttgaaaatgagcaat 33057550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 33358800 - 33358846
Alignment:
Q  179 atgaattgtatcatccatgaaaatgccatgctactgcaacgttccct 225  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||    
T  33358800 atgaattgtttcatccatgaaagtgtcatgctactgcaacgttccct 33358846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 33271618 - 33271657
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaa 134  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  33271618 atccaacttggtatttcacttcctggagttataatatgaa 33271657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 33409801 - 33409840
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaa 134  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  33409801 atccaacttggtatttcacttcctggagttacaatttgaa 33409840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 9166584 - 9166626
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatcc 137  Q
    |||||||||||||||||| ||||||| |||||||| |||||||    
T  9166584 atccaacttggtatttcaattcctggcgtaacaatttgaatcc 9166626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 129
Target Start/End: Original strand, 33398895 - 33398929
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaat 129  Q
    ||||||||||||||||||||||||||| |||||||    
T  33398895 atccaacttggtatttcacttcctggaataacaat 33398929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 33057401 - 33057442
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatc 136  Q
    ||||||||||||||||||||||||||| |||| || ||||||    
T  33057401 atccaacttggtatttcacttcctggattaactatttgaatc 33057442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1408 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1408
Description:

Target: scaffold1408; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 259
Target Start/End: Original strand, 467 - 628
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatccctt-caaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatc 193  Q
    ||||| ||||||||||||||||||||||||||||| |||| | | | |||||| ||||     |||  | ||||||| |||||| ||||||||| |||||    
T  467 atccagcttggtatttcacttcctggagtaacaatttgaagctcatacaaatacggacc----gtaggattgttggtttgcctgaatgaattgtttcatc 562  T
Q  194 catgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    ||||||||||  |||||||| |||| |||||| ||||| |||||||||||||||||||||||||||    
T  563 catgaaaatgttatgctactacaacattccctctcacccaattttggacagttgaaaatgaccaat 628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 259
Target Start/End: Original strand, 6213 - 6374
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatccctt-caaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatc 193  Q
    ||||| ||||||||||||||||||||||||||||| |||| | | | |||||| ||||     |||  | ||||||| |||||| ||||||||| |||||    
T  6213 atccagcttggtatttcacttcctggagtaacaatttgaagctcatacaaatacggacc----gtaggattgttggtttgcctgaatgaattgtttcatc 6308  T
Q  194 catgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    ||||||||||  |||||||| |||| |||||| ||||| |||||||||||||||||||||||||||    
T  6309 catgaaaatgttatgctactacaacattccctctcacccaattttggacagttgaaaatgaccaat 6374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 97 - 259
Target Start/End: Complemental strand, 31479191 - 31479032
Alignment:
Q  97 ccaacttggtatttcacttcctggagtaacaatatgaatcccttcaaataaggacgcagggtaaaagtgttggtatgcctggatgaattgtatcatccat 196  Q
    ||||||||| |||||||| |||||||||||||| |||| ||  ||| |   |||  || || | || ||| ||| |||||| ||||||||||||||||||    
T  31479191 ccaacttggcatttcactacctggagtaacaatttgaaccctatcaga---ggagtcatgggagaattgtcggtttgcctgaatgaattgtatcatccat 31479095  T
Q  197 gaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    ||||||| ||||||||| ||||||||| ||||||| ||||| |||||||||||||||| ||||    
T  31479094 gaaaatgtcatgctactccaacgttccgtttcacccaatttaggacagttgaaaatgaacaat 31479032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 31157123 - 31157210
Alignment:
Q  172 tgcctggatgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    |||||| || |||||||||||||||||||||||||||||| |||||  ||| || ||||| ||||| |||||||||||||||||||||    
T  31157123 tgcctgaatcaattgtatcatccatgaaaatgccatgctattgcaatcttcactctcacccaatttaggacagttgaaaatgaccaat 31157210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 31148192 - 31148268
Alignment:
Q  179 atgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgac 255  Q
    |||| |||||||||||||||||||  ||||||| | |||| |||||| ||||| ||||| |||||||||||||||||    
T  31148192 atgagttgtatcatccatgaaaatatcatgctattccaacattccctctcacccaatttaggacagttgaaaatgac 31148268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 31472661 - 31472571
Alignment:
Q  172 tgcctggatgaattgtatcatccatgaaaatgccatgctactgcaac---gttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    |||||| |||| |||||||||||||||||||| |||| || ||||||   ||||||| ||||| || || |||||||||||||||| ||||    
T  31472661 tgcctgaatgagttgtatcatccatgaaaatgtcatgttagtgcaacaatgttccctctcacccaaattaggacagttgaaaatgagcaat 31472571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 31499238 - 31499199
Alignment:
Q  97 ccaacttggtatttcacttcctggagtaacaatatgaatc 136  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31499238 ccaacttgatatttcacttcctggagtaacaatatgaatc 31499199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 31472733 - 31472695
Alignment:
Q  97 ccaacttggtatttcacttcctggagtaacaatatgaat 135  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  31472733 ccaacttggtatttcacttcctggagtaacaatctgaat 31472695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 31504297 - 31504224
Alignment:
Q  179 atgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaat 252  Q
    ||||||||||||||||||||||||| ||| ||| || | | |||||| ||| | ||||| ||||||||||||||    
T  31504297 atgaattgtatcatccatgaaaatgtcattctaatgtagcattccctctcatccaatttaggacagttgaaaat 31504224  T

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Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 31148122 - 31148161
Alignment:
Q  97 ccaacttggtatttcacttcctggagtaacaatatgaatc 136  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  31148122 ccaacttggtatttcacttcccggagtaacaatttgaatc 31148161  T

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Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 17440984 - 17440904
Alignment:
Q  179 atgaattgtatcatccatgaaaatgccatgctactgcaacgttccctttcacctaattttggacagttgaaaatgaccaat 259  Q
    |||||||| |||||||||||||||| |||||||||| ||| |||||| ||||| ||||||||||||||||| |||| ||||    
T  17440984 atgaattgcatcatccatgaaaatgtcatgctactgtaacattccctctcacccaattttggacagttgaagatgaacaat 17440904  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 17441053 - 17441011
Alignment:
Q  95 atccaacttggtatttcacttcctggagtaacaatatgaatcc 137  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  17441053 atccaacttggtatttcgcttcctggactaacaatatgaatcc 17441011  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 6785558 - 6785526
Alignment:
Q  97 ccaacttggtatttcacttcctggagtaacaat 129  Q
    ||||||||||||||||||||||||| |||||||    
T  6785558 ccaacttggtatttcacttcctggaataacaat 6785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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