View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0545_low_36 (Length: 323)
Name: NF0545_low_36
Description: NF0545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0545_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 29 - 313
Target Start/End: Original strand, 43536905 - 43537189
Alignment:
| Q |
29 |
aagagtttttcatatattggaacataagattaat---tgttgatatagagaaaattaattaatgaacttacggatatcttcatcactgaagggtttggag |
125 |
Q |
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| T |
43536905 |
aagagtttttcatatattggaacataagattaataattgttgatatagagaaaattaattaatcaacttacggatatcttcatcactgaagggtttggag |
43537004 |
T |
|
| Q |
126 |
ttagagatttcatcaagaggaacagagaatccagtaaaggaaaatgagagtcccaaacttgaagctctactaagagcagcaccactattaacctcatgat |
225 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
43537005 |
ttagagatttcatcaagaggaacagagaatccagtaaaggaaaatgagagtcccaaacttgaagctctactaagagcagcaccactattaacctc---at |
43537101 |
T |
|
| Q |
226 |
ccaaatcaaccttcaaagaagtctggacactcctcgccttccttatgtgtgtatttcttccaccgggggatgccctccttgatattct |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43537102 |
ccaaatcaaccttcaaagaagtctggacactcctcgccttccttatgtgtgtatttcttccaccgggggatgccctccttgattttct |
43537189 |
T |
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