View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0545_low_54 (Length: 250)

Name: NF0545_low_54
Description: NF0545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0545_low_54
NF0545_low_54
[»] chr1 (80 HSPs)
chr1 (1-240)||(50269054-50269304)
chr1 (63-175)||(45203297-45203409)
chr1 (58-181)||(41453768-41453891)
chr1 (63-182)||(5845507-5845626)
chr1 (62-182)||(41459230-41459350)
chr1 (57-181)||(36183825-36183949)
chr1 (66-182)||(44470030-44470146)
chr1 (63-182)||(1167496-1167616)
chr1 (63-182)||(23603428-23603547)
chr1 (60-182)||(30910022-30910145)
chr1 (88-182)||(26606758-26606852)
chr1 (77-181)||(23604252-23604356)
chr1 (67-177)||(47661492-47661602)
chr1 (9-62)||(29148940-29148993)
chr1 (59-182)||(13147426-13147550)
chr1 (67-142)||(12627178-12627253)
chr1 (67-140)||(13761105-13761178)
chr1 (63-182)||(27115842-27115962)
chr1 (63-126)||(5844611-5844674)
chr1 (121-180)||(6562182-6562241)
chr1 (62-109)||(20360406-20360453)
chr1 (62-109)||(20550517-20550564)
chr1 (66-108)||(21140963-21141005)
chr1 (124-182)||(52802126-52802184)
chr1 (9-58)||(1403040-1403089)
chr1 (63-108)||(4208331-4208376)
chr1 (9-58)||(11031431-11031480)
chr1 (9-58)||(11032218-11032267)
chr1 (122-179)||(15047276-15047333)
chr1 (121-182)||(23359368-23359429)
chr1 (21-58)||(42839713-42839750)
chr1 (77-182)||(47585547-47585651)
chr1 (63-108)||(49502912-49502957)
chr1 (9-58)||(49534433-49534482)
chr1 (66-182)||(4883171-4883287)
chr1 (64-148)||(5750280-5750364)
chr1 (121-181)||(6557908-6557968)
chr1 (66-182)||(19914404-19914520)
chr1 (66-181)||(29356685-29356807)
chr1 (64-108)||(49395539-49395583)
chr1 (121-197)||(52805538-52805613)
chr1 (3-54)||(8560150-8560201)
chr1 (61-182)||(16270044-16270164)
chr1 (67-142)||(28456777-28456852)
chr1 (23-58)||(42839585-42839620)
chr1 (61-148)||(43011760-43011847)
chr1 (9-56)||(43350968-43351015)
chr1 (61-108)||(45780999-45781046)
chr1 (60-182)||(50037289-50037412)
chr1 (9-56)||(50267562-50267609)
chr1 (121-180)||(51288880-51288939)
chr1 (84-182)||(586624-586722)
chr1 (116-181)||(20349444-20349510)
chr1 (84-134)||(38878529-38878579)
chr1 (25-58)||(1403724-1403757)
chr1 (67-104)||(5329062-5329099)
chr1 (9-58)||(7782728-7782777)
chr1 (21-58)||(8560779-8560816)
chr1 (149-182)||(9710599-9710632)
chr1 (149-182)||(19161913-19161946)
chr1 (157-197)||(22346023-22346061)
chr1 (121-182)||(23276127-23276188)
chr1 (9-62)||(35616770-35616823)
chr1 (21-58)||(42838949-42838986)
chr1 (21-58)||(43368872-43368909)
chr1 (21-58)||(52859825-52859862)
chr1 (157-185)||(4518405-4518433)
chr1 (130-182)||(9711670-9711722)
chr1 (130-182)||(11183188-11183240)
chr1 (63-135)||(13535686-13535758)
chr1 (121-181)||(27485052-27485112)
chr1 (121-177)||(30905764-30905820)
chr1 (67-123)||(40152810-40152866)
chr1 (22-54)||(43368203-43368235)
chr1 (130-182)||(44336251-44336303)
chr1 (60-108)||(45780165-45780213)
chr1 (21-49)||(48620369-48620397)
chr1 (66-142)||(50036785-50036861)
chr1 (60-108)||(51461943-51461991)
chr1 (121-185)||(51666655-51666718)
[»] chr4 (92 HSPs)
chr4 (61-182)||(41933641-41933762)
chr4 (62-182)||(14297080-14297199)
chr4 (62-182)||(14315329-14315448)
chr4 (63-184)||(40335153-40335274)
chr4 (66-182)||(48578175-48578291)
chr4 (62-181)||(35075899-35076018)
chr4 (58-180)||(10753436-10753558)
chr4 (58-180)||(10967205-10967327)
chr4 (58-182)||(15995651-15995776)
chr4 (66-182)||(19069124-19069241)
chr4 (63-181)||(33051673-33051791)
chr4 (61-177)||(72529-72645)
chr4 (62-182)||(20208444-20208564)
chr4 (86-181)||(3403805-3403900)
chr4 (66-182)||(15999818-15999935)
chr4 (63-182)||(11084026-11084145)
chr4 (66-177)||(46439586-46439697)
chr4 (63-109)||(18411133-18411179)
chr4 (90-182)||(26791610-26791703)
chr4 (66-170)||(6790202-6790306)
chr4 (66-142)||(18884563-18884639)
chr4 (121-180)||(50274753-50274812)
chr4 (7-62)||(52870149-52870204)
chr4 (8-58)||(199263-199313)
chr4 (4-58)||(25370429-25370483)
chr4 (63-149)||(36003581-36003667)
chr4 (9-58)||(388753-388802)
chr4 (121-182)||(9889987-9890048)
chr4 (21-58)||(52869459-52869496)
chr4 (149-197)||(50278803-50278850)
chr4 (7-58)||(2713880-2713931)
chr4 (7-58)||(12639963-12640014)
chr4 (21-59)||(3221423-3221461)
chr4 (66-108)||(8111508-8111550)
chr4 (67-109)||(11565805-11565847)
chr4 (67-182)||(33409466-33409577)
chr4 (55-182)||(33410248-33410376)
chr4 (8-58)||(33569719-33569769)
chr4 (63-109)||(43210317-43210363)
chr4 (9-62)||(198153-198206)
chr4 (21-58)||(199011-199048)
chr4 (9-62)||(7988278-7988331)
chr4 (21-58)||(20075537-20075574)
chr4 (67-108)||(43176721-43176762)
chr4 (67-108)||(48806424-48806465)
chr4 (60-109)||(52469135-52469184)
chr4 (9-58)||(55815825-55815874)
chr4 (21-58)||(55816487-55816524)
chr4 (78-182)||(21022907-21023011)
chr4 (66-142)||(28322176-28322252)
chr4 (9-57)||(35428238-35428286)
chr4 (150-181)||(1044539-1044570)
chr4 (121-176)||(4768671-4768726)
chr4 (62-109)||(10729337-10729384)
chr4 (62-109)||(10943106-10943153)
chr4 (21-56)||(20422143-20422178)
chr4 (67-142)||(27872318-27872393)
chr4 (125-180)||(30042474-30042529)
chr4 (9-56)||(39844896-39844943)
chr4 (99-182)||(40833629-40833712)
chr4 (9-51)||(18501739-18501781)
chr4 (66-108)||(28157519-28157561)
chr4 (8-58)||(31876787-31876837)
chr4 (21-55)||(36111256-36111290)
chr4 (66-108)||(40061254-40061296)
chr4 (66-108)||(40962892-40962934)
chr4 (4-58)||(48091132-48091186)
chr4 (21-58)||(389442-389479)
chr4 (22-59)||(3220530-3220567)
chr4 (90-182)||(8109352-8109445)
chr4 (25-62)||(11334338-11334375)
chr4 (15-56)||(11367151-11367192)
chr4 (21-58)||(12640623-12640660)
chr4 (149-182)||(16984180-16984213)
chr4 (63-108)||(30703953-30703998)
chr4 (21-62)||(33758120-33758161)
chr4 (149-178)||(34530792-34530821)
chr4 (21-58)||(36945260-36945297)
chr4 (67-108)||(37856837-37856878)
chr4 (121-178)||(39588085-39588142)
chr4 (9-58)||(40847677-40847726)
chr4 (63-180)||(44010499-44010616)
chr4 (21-58)||(48090478-48090515)
chr4 (149-182)||(49889704-49889737)
chr4 (21-58)||(52597502-52597539)
chr4 (60-109)||(55407873-55407922)
chr4 (125-181)||(1041932-1041988)
chr4 (90-134)||(31242818-31242862)
chr4 (22-62)||(34371475-34371515)
chr4 (57-109)||(43175663-43175715)
chr4 (61-101)||(46562490-46562530)
chr4 (137-181)||(55407813-55407857)
[»] chr6 (45 HSPs)
chr6 (63-182)||(31496169-31496288)
chr6 (63-182)||(31501555-31501674)
chr6 (63-182)||(31516909-31517028)
chr6 (67-181)||(17596879-17596994)
chr6 (61-108)||(3385095-3385142)
chr6 (63-182)||(31480297-31480416)
chr6 (63-182)||(31516057-31516176)
chr6 (67-148)||(35096610-35096691)
chr6 (121-197)||(29286222-29286296)
chr6 (63-182)||(8193228-8193348)
chr6 (121-181)||(18347034-18347094)
chr6 (8-58)||(13936677-13936727)
chr6 (63-109)||(14124810-14124856)
chr6 (65-102)||(3177493-3177530)
chr6 (121-182)||(31768746-31768807)
chr6 (64-109)||(32643459-32643504)
chr6 (9-58)||(33668221-33668270)
chr6 (86-182)||(13388727-13388818)
chr6 (63-183)||(26184624-26184744)
chr6 (130-182)||(28362750-28362802)
chr6 (62-102)||(31791420-31791460)
chr6 (61-108)||(455402-455449)
chr6 (57-108)||(9391230-9391281)
chr6 (9-56)||(11119579-11119626)
chr6 (9-59)||(5523882-5523932)
chr6 (66-108)||(15888892-15888934)
chr6 (150-196)||(31151044-31151089)
chr6 (61-142)||(456100-456181)
chr6 (21-58)||(6032170-6032207)
chr6 (67-108)||(11157649-11157690)
chr6 (60-141)||(21603969-21604050)
chr6 (121-178)||(29061289-29061346)
chr6 (121-170)||(29065733-29065782)
chr6 (121-170)||(29074746-29074795)
chr6 (121-170)||(29079510-29079559)
chr6 (121-170)||(29107319-29107368)
chr6 (9-58)||(30611382-30611431)
chr6 (130-183)||(31146375-31146428)
chr6 (63-108)||(32034459-32034504)
chr6 (9-50)||(32079019-32079060)
chr6 (86-182)||(2109475-2109571)
chr6 (63-119)||(3178132-3178188)
chr6 (78-182)||(6760891-6760995)
chr6 (58-178)||(24085159-24085279)
chr6 (149-181)||(31771761-31771793)
[»] chr2 (69 HSPs)
chr2 (63-168)||(37893121-37893226)
chr2 (63-149)||(25515861-25515947)
chr2 (77-182)||(31568601-31568706)
chr2 (63-135)||(7780400-7780472)
chr2 (67-182)||(14456440-14456556)
chr2 (63-170)||(40539125-40539233)
chr2 (9-63)||(32471939-32471993)
chr2 (60-142)||(38779699-38779781)
chr2 (66-142)||(4286032-4286108)
chr2 (64-148)||(37893423-37893507)
chr2 (58-142)||(40220569-40220653)
chr2 (78-180)||(3803564-3803667)
chr2 (78-182)||(3795286-3795391)
chr2 (66-142)||(26544048-26544124)
chr2 (68-182)||(7779584-7779695)
chr2 (63-181)||(19694172-19694291)
chr2 (63-182)||(40055312-40055431)
chr2 (8-58)||(9224265-9224315)
chr2 (9-58)||(4386997-4387046)
chr2 (21-62)||(43743835-43743876)
chr2 (66-142)||(4286760-4286836)
chr2 (9-61)||(4769048-4769100)
chr2 (61-181)||(19848140-19848260)
chr2 (86-170)||(31567899-31567983)
chr2 (63-182)||(36255732-36255852)
chr2 (66-182)||(36510875-36510991)
chr2 (121-181)||(38945755-38945815)
chr2 (16-55)||(14565214-14565253)
chr2 (63-182)||(30803037-30803156)
chr2 (63-181)||(31974267-31974384)
chr2 (67-109)||(14002458-14002500)
chr2 (8-58)||(20244208-20244258)
chr2 (121-182)||(1096588-1096649)
chr2 (21-58)||(6849300-6849337)
chr2 (9-58)||(6849579-6849628)
chr2 (9-58)||(7716671-7716720)
chr2 (21-58)||(10883299-10883336)
chr2 (21-58)||(16571130-16571167)
chr2 (121-182)||(27276393-27276454)
chr2 (9-58)||(28223788-28223837)
chr2 (21-58)||(28224425-28224462)
chr2 (63-108)||(29905396-29905441)
chr2 (90-182)||(30271035-30271128)
chr2 (56-108)||(33001915-33001967)
chr2 (66-142)||(40221189-40221265)
chr2 (61-174)||(36254949-36255063)
chr2 (61-108)||(37294274-37294321)
chr2 (9-56)||(42946913-42946960)
chr2 (66-109)||(43313451-43313494)
chr2 (8-58)||(7583830-7583880)
chr2 (12-58)||(8113337-8113383)
chr2 (8-58)||(9958740-9958790)
chr2 (116-178)||(20951069-20951131)
chr2 (124-182)||(23409520-23409578)
chr2 (62-108)||(43978260-43978306)
chr2 (8-58)||(44829315-44829365)
chr2 (21-58)||(3595258-3595295)
chr2 (9-62)||(5276465-5276518)
chr2 (149-182)||(7189970-7190003)
chr2 (21-58)||(7717321-7717358)
chr2 (21-58)||(12206800-12206837)
chr2 (67-108)||(16544310-16544351)
chr2 (21-58)||(16887595-16887632)
chr2 (67-108)||(28139650-28139691)
chr2 (90-182)||(43618534-43618627)
chr2 (8-56)||(18950534-18950582)
chr2 (17-49)||(28491883-28491915)
chr2 (22-58)||(39477362-39477398)
chr2 (66-142)||(40156337-40156413)
[»] chr8 (67 HSPs)
chr8 (57-147)||(35555226-35555316)
chr8 (63-181)||(33483512-33483630)
chr8 (57-175)||(35555458-35555576)
chr8 (63-182)||(45133292-45133411)
chr8 (66-149)||(27411609-27411692)
chr8 (63-181)||(33482698-33482816)
chr8 (63-142)||(39277520-39277599)
chr8 (63-148)||(5680469-5680554)
chr8 (66-142)||(39831094-39831170)
chr8 (68-135)||(4174027-4174094)
chr8 (67-150)||(37326897-37326980)
chr8 (4-58)||(33114225-33114279)
chr8 (67-109)||(37651755-37651797)
chr8 (58-119)||(4395060-4395121)
chr8 (9-58)||(7818474-7818523)
chr8 (59-108)||(31948103-31948152)
chr8 (9-58)||(43433811-43433860)
chr8 (9-58)||(43434701-43434750)
chr8 (67-135)||(39513253-39513321)
chr8 (121-197)||(41743883-41743958)
chr8 (62-109)||(6013837-6013884)
chr8 (7-58)||(16889193-16889244)
chr8 (7-58)||(35237257-35237308)
chr8 (4-59)||(39852149-39852204)
chr8 (60-182)||(2335167-2335289)
chr8 (67-109)||(6013903-6013945)
chr8 (67-109)||(13782174-13782216)
chr8 (63-108)||(7120835-7120880)
chr8 (9-58)||(11999117-11999166)
chr8 (9-58)||(41761799-41761848)
chr8 (21-58)||(43591019-43591056)
chr8 (130-182)||(30755691-30755743)
chr8 (66-142)||(31745120-31745196)
chr8 (121-180)||(1114736-1114795)
chr8 (16-51)||(10199097-10199132)
chr8 (66-105)||(20859700-20859739)
chr8 (63-142)||(23508532-23508611)
chr8 (61-148)||(31185498-31185585)
chr8 (99-182)||(32584023-32584106)
chr8 (16-51)||(38573094-38573129)
chr8 (9-56)||(40646192-40646239)
chr8 (61-108)||(42731764-42731811)
chr8 (63-140)||(52636-52714)
chr8 (66-108)||(3695308-3695350)
chr8 (84-182)||(28617524-28617622)
chr8 (16-58)||(38572229-38572271)
chr8 (66-108)||(40075070-40075112)
chr8 (59-109)||(41858214-41858264)
chr8 (8-62)||(42345393-42345447)
chr8 (21-58)||(11998468-11998505)
chr8 (121-182)||(20549251-20549312)
chr8 (149-182)||(22550884-22550917)
chr8 (21-58)||(30116033-30116070)
chr8 (9-50)||(37532576-37532617)
chr8 (149-182)||(39601725-39601758)
chr8 (67-108)||(40740845-40740886)
chr8 (21-58)||(40907611-40907648)
chr8 (67-108)||(41472107-41472148)
chr8 (121-182)||(44052245-44052306)
chr8 (150-182)||(39505-39537)
chr8 (66-182)||(5533044-5533160)
chr8 (7-55)||(15824228-15824276)
chr8 (58-182)||(38604267-38604391)
chr8 (66-146)||(40039064-40039144)
chr8 (57-109)||(41471022-41471074)
chr8 (6-58)||(44062633-44062685)
chr8 (123-179)||(45454401-45454457)
[»] chr7 (63 HSPs)
chr7 (63-178)||(47669542-47669658)
chr7 (62-142)||(7953816-7953896)
chr7 (66-142)||(7974877-7974953)
chr7 (61-148)||(34139722-34139809)
chr7 (8-63)||(38914115-38914170)
chr7 (63-173)||(42808731-42808841)
chr7 (9-62)||(85082-85135)
chr7 (61-182)||(20353949-20354069)
chr7 (66-182)||(40140676-40140793)
chr7 (60-109)||(48589737-48589786)
chr7 (66-109)||(31324897-31324940)
chr7 (92-177)||(45350870-45350956)
chr7 (121-181)||(618745-618805)
chr7 (66-142)||(19804548-19804624)
chr7 (61-109)||(31322982-31323030)
chr7 (122-182)||(34742414-34742474)
chr7 (16-55)||(4270183-4270222)
chr7 (21-60)||(24044078-24044117)
chr7 (121-180)||(27453615-27453674)
chr7 (61-108)||(47521350-47521397)
chr7 (67-109)||(11885898-11885940)
chr7 (62-108)||(28115566-28115612)
chr7 (21-58)||(84389-84426)
chr7 (124-197)||(5537868-5537940)
chr7 (67-108)||(5541636-5541677)
chr7 (121-182)||(9494825-9494886)
chr7 (21-58)||(19816276-19816313)
chr7 (21-58)||(22276113-22276150)
chr7 (21-62)||(23283875-23283916)
chr7 (21-58)||(34853403-34853440)
chr7 (9-58)||(36682835-36682884)
chr7 (21-58)||(36683501-36683538)
chr7 (64-181)||(36805473-36805590)
chr7 (21-58)||(42456553-42456590)
chr7 (21-58)||(46814417-46814454)
chr7 (121-182)||(47776325-47776386)
chr7 (67-182)||(30846814-30846929)
chr7 (57-108)||(12081286-12081337)
chr7 (67-142)||(14102407-14102482)
chr7 (67-142)||(14412424-14412499)
chr7 (8-55)||(42455920-42455967)
chr7 (66-101)||(48590439-48590474)
chr7 (66-108)||(556738-556780)
chr7 (16-58)||(4271234-4271276)
chr7 (62-148)||(20353303-20353389)
chr7 (16-62)||(29060734-29060780)
chr7 (12-58)||(33806604-33806650)
chr7 (8-62)||(39318364-39318418)
chr7 (66-108)||(48901532-48901574)
chr7 (25-58)||(4894515-4894548)
chr7 (67-108)||(13644360-13644401)
chr7 (9-58)||(27855566-27855615)
chr7 (125-178)||(34139894-34139947)
chr7 (149-182)||(34738385-34738418)
chr7 (21-58)||(34854033-34854070)
chr7 (63-108)||(36781542-36781587)
chr7 (21-58)||(47814672-47814709)
chr7 (78-182)||(7019-7123)
chr7 (115-178)||(9491394-9491458)
chr7 (22-58)||(19816929-19816965)
chr7 (8-56)||(30422782-30422829)
chr7 (121-185)||(36186489-36186552)
chr7 (130-182)||(42499411-42499463)
[»] chr3 (77 HSPs)
chr3 (66-182)||(2743335-2743452)
chr3 (78-182)||(45507416-45507520)
chr3 (80-182)||(13743245-13743347)
chr3 (66-177)||(6928751-6928862)
chr3 (71-142)||(40872017-40872088)
chr3 (66-142)||(1294136-1294212)
chr3 (61-181)||(45506576-45506696)
chr3 (123-182)||(49219810-49219869)
chr3 (86-182)||(9429868-9429965)
chr3 (66-178)||(11380378-11380491)
chr3 (7-58)||(3944893-3944944)
chr3 (57-120)||(15294485-15294548)
chr3 (67-109)||(32592156-32592198)
chr3 (58-108)||(42760302-42760352)
chr3 (57-182)||(13747737-13747862)
chr3 (121-182)||(19341613-19341674)
chr3 (21-58)||(38279421-38279458)
chr3 (66-175)||(40871843-40871952)
chr3 (78-182)||(50957685-50957790)
chr3 (62-170)||(2831020-2831128)
chr3 (66-182)||(14043917-14044033)
chr3 (67-142)||(7941049-7941124)
chr3 (66-109)||(26494588-26494631)
chr3 (59-182)||(27739586-27739709)
chr3 (123-182)||(34691620-34691679)
chr3 (9-59)||(25025174-25025224)
chr3 (21-59)||(25025800-25025838)
chr3 (4-58)||(32672161-32672215)
chr3 (130-184)||(41137720-41137774)
chr3 (57-182)||(12897753-12897878)
chr3 (9-58)||(23584920-23584969)
chr3 (9-58)||(23599743-23599792)
chr3 (121-182)||(30256022-30256083)
chr3 (9-58)||(37373965-37374014)
chr3 (9-62)||(41040571-41040624)
chr3 (56-180)||(50953229-50953354)
chr3 (9-49)||(8424007-8424047)
chr3 (63-119)||(14016787-14016843)
chr3 (88-180)||(24700681-24700773)
chr3 (4-48)||(42356228-42356272)
chr3 (66-142)||(52514229-52514305)
chr3 (61-108)||(34645495-34645542)
chr3 (9-56)||(41553348-41553395)
chr3 (66-109)||(50330550-50330593)
chr3 (83-170)||(51325935-51326022)
chr3 (22-56)||(8427156-8427190)
chr3 (67-109)||(10658762-10658804)
chr3 (66-108)||(16861067-16861109)
chr3 (66-108)||(17561697-17561739)
chr3 (66-108)||(31977597-31977639)
chr3 (66-108)||(41615881-41615923)
chr3 (8-62)||(43768025-43768079)
chr3 (21-55)||(44868658-44868692)
chr3 (21-59)||(46187032-46187070)
chr3 (63-109)||(48892216-48892262)
chr3 (16-62)||(49161803-49161849)
chr3 (21-59)||(50687744-50687782)
chr3 (21-55)||(55281847-55281881)
chr3 (121-182)||(4002524-4002585)
chr3 (68-181)||(4002680-4002793)
chr3 (149-182)||(4004822-4004855)
chr3 (121-182)||(7841114-7841175)
chr3 (21-58)||(8427780-8427817)
chr3 (149-182)||(11249543-11249576)
chr3 (121-182)||(14402989-14403050)
chr3 (21-58)||(23584249-23584286)
chr3 (21-58)||(23599072-23599109)
chr3 (21-58)||(29342353-29342390)
chr3 (21-58)||(41459142-41459179)
chr3 (149-182)||(43478849-43478882)
chr3 (121-182)||(48250888-48250949)
chr3 (149-182)||(55385158-55385191)
chr3 (66-182)||(34543155-34543271)
chr3 (66-110)||(41802895-41802939)
chr3 (22-58)||(43104531-43104567)
chr3 (137-181)||(48888749-48888793)
chr3 (63-119)||(51326726-51326782)
[»] chr5 (51 HSPs)
chr5 (62-182)||(27532636-27532756)
chr5 (60-181)||(7021878-7021999)
chr5 (66-181)||(8539536-8539651)
chr5 (7-62)||(39149464-39149519)
chr5 (58-182)||(42098232-42098357)
chr5 (78-178)||(13563617-13563717)
chr5 (66-142)||(13838483-13838559)
chr5 (61-182)||(39742507-39742629)
chr5 (8-58)||(3957499-3957549)
chr5 (62-183)||(13707949-13708071)
chr5 (67-109)||(35651354-35651396)
chr5 (66-170)||(7017449-7017554)
chr5 (125-182)||(38968092-38968149)
chr5 (125-181)||(13568095-13568151)
chr5 (62-182)||(27531856-27531976)
chr5 (8-58)||(4929543-4929593)
chr5 (93-182)||(13665380-13665470)
chr5 (97-182)||(29430597-29430683)
chr5 (66-148)||(34080125-34080207)
chr5 (66-108)||(38408560-38408602)
chr5 (62-147)||(40622412-40622495)
chr5 (125-197)||(4196579-4196648)
chr5 (21-58)||(25075034-25075071)
chr5 (21-58)||(25133003-25133040)
chr5 (121-182)||(29430015-29430076)
chr5 (125-181)||(34122521-34122577)
chr5 (6-58)||(38064139-38064191)
chr5 (121-180)||(1397371-1397430)
chr5 (7-62)||(1970509-1970564)
chr5 (99-182)||(3891454-3891537)
chr5 (62-176)||(19228671-19228786)
chr5 (17-56)||(21612142-21612181)
chr5 (6-56)||(3958324-3958374)
chr5 (67-109)||(18512743-18512785)
chr5 (67-149)||(40624968-40625049)
chr5 (67-109)||(41622112-41622154)
chr5 (149-182)||(7757346-7757379)
chr5 (121-182)||(28388538-28388599)
chr5 (90-182)||(30966053-30966144)
chr5 (121-197)||(31094556-31094629)
chr5 (71-108)||(35564204-35564241)
chr5 (121-182)||(41799786-41799847)
chr5 (67-107)||(8698837-8698877)
chr5 (130-182)||(8702217-8702269)
chr5 (22-58)||(8813090-8813126)
chr5 (22-58)||(21770007-21770043)
chr5 (121-181)||(27867840-27867900)
chr5 (137-181)||(37820874-37820918)
chr5 (22-58)||(39148781-39148817)
chr5 (115-182)||(41065871-41065938)
chr5 (149-181)||(43094596-43094628)
[»] scaffold0143 (2 HSPs)
scaffold0143 (63-185)||(3048-3170)
scaffold0143 (63-181)||(3860-3978)
[»] scaffold0188 (1 HSPs)
scaffold0188 (61-142)||(27975-28056)
[»] scaffold0176 (2 HSPs)
scaffold0176 (61-148)||(647-734)
scaffold0176 (125-178)||(819-872)
[»] scaffold0155 (2 HSPs)
scaffold0155 (57-182)||(12963-13088)
scaffold0155 (64-144)||(8197-8277)
[»] scaffold0341 (1 HSPs)
scaffold0341 (121-180)||(17372-17431)
[»] scaffold0229 (1 HSPs)
scaffold0229 (9-58)||(15270-15319)
[»] scaffold0116 (1 HSPs)
scaffold0116 (122-182)||(15974-16034)
[»] scaffold0039 (2 HSPs)
scaffold0039 (8-59)||(90614-90665)
scaffold0039 (16-58)||(32898-32940)
[»] scaffold0513 (1 HSPs)
scaffold0513 (80-182)||(8151-8253)
[»] scaffold0260 (1 HSPs)
scaffold0260 (116-181)||(11767-11833)
[»] scaffold0068 (1 HSPs)
scaffold0068 (63-109)||(46670-46716)
[»] scaffold0368 (1 HSPs)
scaffold0368 (21-58)||(11821-11858)
[»] scaffold0158 (1 HSPs)
scaffold0158 (61-138)||(27575-27652)
[»] scaffold0201 (1 HSPs)
scaffold0201 (121-181)||(22396-22456)


Alignment Details
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 50269304 - 50269054
Alignment:
Q  1 tactttttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagttttttgaaaattgttgttgacacatgtggtttggctgagaaac 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50269304 tactttttggtggcatttaccatgggaaatgtgaatcctttcccaccatgggaaagttttttgaaaattgttgttgacacatgtggtttggctgagaaac 50269205  T
Q  101 acgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgc-----------cgaggaaaacaatatta 189  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||| | | ||||||||||||||           |||||||||||||||||    
T  50269204 acgagtaaaagatgaaaatacccctcggtagttaagtgtcgaggaaaaagaaaaccgactgcagttaactgccgagaaaaacccgaggaaaacaatatta 50269105  T
Q  190 tgcagacaatggtactttttctgaacaaaaacatgcgtaaccctcttctct 240  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  50269104 tgctgacaatggtactttttctgaacaaaaacatgcgtaacactcttctct 50269054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 45203297 - 45203409
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    |||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||| | | | ||||||    
T  45203297 gaaaattgctgttgacatatgtggtttgattgagaaacacgagtaaaggacgaaaatacccctcaatagttaagtgtcgaggaaaaatagaaccggctgc 45203396  T
Q  163 agttaactgccga 175  Q
    |||||||||||||    
T  45203397 agttaactgccga 45203409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 41453768 - 41453891
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctg 157  Q
    ||||||| ||||||||||  ||| ||| ||||||||||||||||| ||||||  ||| ||| |||||||||||||||| ||||||||||   |||||| |    
T  41453768 tttttgagaattgttgttcccacttgttgtttggctgagaaacactagtaaattacgcaaacacccctcggtagttaactgccgaggaatttgaaatccg 41453867  T
Q  158 gctgcagttaactgccgaggaaaa 181  Q
    ||||||||||||||||||||||||    
T  41453868 gctgcagttaactgccgaggaaaa 41453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 5845626 - 5845507
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    |||||||| |||  ||||||||| ||||||| ||||||||  ||||| |||||||||||| |||| ||||||| ||||||||||||| ||| | ||||||    
T  5845626 gaaaattgatgtatacacatgtgatttggctaagaaacacatgtaaaagacgaaaatacctctcgatagttaactgccgaggaaaaataaaaccggctgc 5845527  T
Q  163 agttaactgccgaggaaaac 182  Q
    |||||||| |||||||||||    
T  5845526 agttaactaccgaggaaaac 5845507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 41459350 - 41459230
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    |||||||||||| | |||||||| |||||||||||||||||  |||||  || |||||||||||||  |||||| ||||||||||||| ||| |  ||||    
T  41459350 tgaaaattgttgataacacatgttgtttggctgagaaacacatgtaaaataccaaaatacccctcgacagttaactgccgaggaaaaataaaaccagctg 41459251  T
Q  162 cagttaactgccgaggaaaac 182  Q
    ||||||||| |||||||||||    
T  41459250 cagttaactaccgaggaaaac 41459230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 36183825 - 36183949
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatct 156  Q
    |||||| | |||||||||  |||||||| | |||||||||||||||  |||||  |||||||||||  ||||||||||||| ||||||||||| ||| |     
T  36183825 tttttttagaattgttgtacacacatgttgattggctgagaaacacatgtaaaaaacgaaaatacctttcggtagttaagtaccgaggaaaaataaaacc 36183924  T
Q  157 ggctgcagttaactgccgaggaaaa 181  Q
    ||| ||||||||||||||| |||||    
T  36183925 ggcagcagttaactgccgaagaaaa 36183949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 44470146 - 44470030
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||| ||||||||||||| |||||||||||||||||   ||||  |   ||||||||||||| |||||| ||||||||||   |||||| |||||||||    
T  44470146 aattgctgttgacacatgttgtttggctgagaaacacatttaaattatccaaatacccctcggcagttaactgccgaggaatttgaaatccggctgcagt 44470047  T
Q  166 taactgccgaggaaaac 182  Q
    |||||||||||||||||    
T  44470046 taactgccgaggaaaac 44470030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 1167496 - 1167616
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaata-cccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||  || |||||| |||||| | |||||| ||||||||||||  ||| | | |||    
T  1167496 gaaaattgccgttgacacatgtggtttggctgagaaacacaagtaaaataccaaaataccccctctgcagttaactgccgaggaaaagtaaaaccgactg 1167595  T
Q  162 cagttaactgccgaggaaaac 182  Q
    |||||||||  ||||||||||    
T  1167596 cagttaactatcgaggaaaac 1167616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 23603428 - 23603547
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    |||||||| |||  |||||||  |||||||||||||||||   |||| |||||||||||||||| |||||||| ||||| ||||||| ||| | | ||||    
T  23603428 gaaaattgctgtgtacacatgctgtttggctgagaaacacatataaaagacgaaaatacccctcagtagttaactgccggggaaaaataaaacagactgc 23603527  T
Q  163 agttaactgccgaggaaaac 182  Q
    ||||||||  ||||||||||    
T  23603528 agttaactatcgaggaaaac 23603547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 30910145 - 30910022
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctgg 158  Q
    ||||| ||||| ||||  ||||||| ||||||||||||||||| ||||||  ||  ||||||||| |||| |||||| || |||||||   |||||| ||    
T  30910145 tttgagaattgctgttcccacatgttgtttggctgagaaacacaagtaaattacccaaataccccctcggcagttaactgtcgaggaatttgaaatccgg 30910046  T
Q  159 ctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||||||    
T  30910045 ctgcagttaactgccgaggaaaac 30910022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 26606758 - 26606852
Alignment:
Q  88 ttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||||  || |||||||||||||||| |||| ||||||||||| |  || ||| || ||||||||| |||||||||||    
T  26606758 ttggctgagaaacacgagtaaaataccaaaatacccctcggtaattaactgccgaggaaatacgaaactgactacagttaactaccgaggaaaac 26606852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 23604356 - 23604252
Alignment:
Q  77 acacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgag 176  Q
    |||||||| |||||||| | ||||||  ||||| ||||||||||| ||||  ||||||| ||||||||||||| ||| | || ||||||||||| |||||    
T  23604356 acacatgttgtttggctcaaaaacacatgtaaaagacgaaaatactcctcaatagttaactgccgaggaaaaataaaaccggttgcagttaactaccgag 23604257  T
Q  177 gaaaa 181  Q
    |||||    
T  23604256 gaaaa 23604252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 47661602 - 47661492
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagtt 166  Q
    |||| ||||||||||| | ||| ||||||||||||||||||||  || |||||| |||||||||||||| || |||||||| |  || ||||||||| ||    
T  47661602 attgatgttgacacatcttgttaggctgagaaacacgagtaaaataccaaaatatccctcggtagttaactgtcgaggaaacacgaaactggctgcaatt 47661503  T
Q  167 aactgccgagg 177  Q
    || | ||||||    
T  47661502 aattaccgagg 47661492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 29148940 - 29148993
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||||||||||    
T  29148940 ggtggcatttaacacgggaaaggttaatcctttcccaccatgggaaagtttttt 29148993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 13147426 - 13147550
Alignment:
Q  59 ttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaa-atctg 157  Q
    ||||||||| || |||||| |||| | |||||||||| |||||| |||||| |||| ||||| | |||||||||||| ||| |||||||||  | | | |    
T  13147426 ttttgaaaactgctgttgatacatcttgtttggctgaaaaacacaagtaaaagacggaaatatcactcggtagttaactgctgaggaaaaaatagaaccg 13147525  T
Q  158 gctgcagttaactgccgaggaaaac 182  Q
     |||||||||||| |||||||||||    
T  13147526 actgcagttaactaccgaggaaaac 13147550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 12627178 - 12627253
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||| |||||| |||||||||||||||||||||||||   ||  |||||||| ||||||||||| ||||||    
T  12627178 attgttgttcacacatttggtttggctgagaaacacgagtaatttacccaaatacccttcggtagttaattgccga 12627253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 13761178 - 13761105
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgcc 140  Q
    |||||||||||||||| |||||||| |||||||||||||||||  ||  |||| |||||||| |||||| ||||    
T  13761178 attgttgttgacacatttggtttggatgagaaacacgagtaaattactcaaatgcccctcggcagttaactgcc 13761105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 27115962 - 27115842
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccct-cggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    |||||||||||||||||||| ||    ||||||||||||| |||||| |||| ||||| || | ||| |||||| ||||||||||    ||| | |||||    
T  27115962 gaaaattgttgttgacacatatgagaaggctgagaaacaccagtaaaagacgtaaatatccatgcggcagttaattgccgaggaatttaaaaaccggctg 27115863  T
Q  162 cagttaactgccgaggaaaac 182  Q
    |||||||||||||| ||||||    
T  27115862 cagttaactgccgaagaaaac 27115842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 5844611 - 5844674
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctc 126  Q
    ||||||||||||  |||||||| |||||||||||||||||  ||||| | ||||||||||||||    
T  5844611 gaaaattgttgtatacacatgttgtttggctgagaaacacatgtaaaagtcgaaaatacccctc 5844674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 6562241 - 6562182
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    |||||||| |||||| ||||||||||   |||||| ||||||||||||||||||||||||    
T  6562241 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaa 6562182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 20360406 - 20360453
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||    
T  20360406 tgaaaattgttgttgacacatgtgatttggcagaaaaacacgagtaaa 20360453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 20550564 - 20550517
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||||||||||| |||||| || |||||||||||||    
T  20550564 tgaaaattgttgttgacacatgtgatttggcagaaaaacacgagtaaa 20550517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 21140963 - 21141005
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  21140963 aattgttgttgacacatttggtttggctgagacacacgagtaa 21141005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 52802126 - 52802184
Alignment:
Q  124 ctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||| |||||| ||||||||||   |||||| ||||||||||||||||||||||||||    
T  52802126 ctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 52802184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 1403040 - 1403089
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  ||||| |||||| |||||||||||||||||||||||||    
T  1403040 ggtggcatttcacatggaaaaggttaatcctttcccaccatgggaaagtt 1403089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 4208331 - 4208376
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||    
T  4208331 gaaaattgttgttgacacatttggtttgattgagaaacacgagtaa 4208376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 11031431 - 11031480
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| ||||||||||| ||||  ||||||||||||||||||||    
T  11031431 ggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagtt 11031480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 11032267 - 11032218
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| ||||||||||| ||||  ||||||||||||||||||||    
T  11032267 ggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagtt 11032218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 15047276 - 15047333
Alignment:
Q  122 ccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaa 179  Q
    ||||||| |||||| ||||||||||   |||||| |||||||||||||||||||||||    
T  15047276 ccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaa 15047333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 23359429 - 23359368
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||||||||||   |||||| |||||||||||||| |||||||||||    
T  23359429 cccctcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaac 23359368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 42839713 - 42839750
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  42839713 catgggaaaggttaatcctttcccaccatgggaaagtt 42839750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 47585547 - 47585651
Alignment:
Q  77 acacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgag 176  Q
    |||||||| |||||| ||||||||||  |||||  || ||||||||||| || |||| | || |||||||||| |||   |||||||||||||| |||||    
T  47585547 acacatgttgtttgg-tgagaaacacatgtaaaataccaaaatacccctaggcagttgactgtcgaggaaaaataaaatcggctgcagttaactaccgag 47585645  T
Q  177 gaaaac 182  Q
    ||||||    
T  47585646 gaaaac 47585651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 49502957 - 49502912
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||    
T  49502957 gaaaattgttgttgacacatatgcattggctgagaaacacgagtaa 49502912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 49534482 - 49534433
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||||||||||||||||| ||||||    
T  49534482 ggtggcatttcacatgggaaaggttaatcctttcccaccatggaaaagtt 49534433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 4883171 - 4883287
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||||||||  ||||| ||||||||||| |  |||||||||||  ||  |||||||||||   |||||| |||||| |    ||||||  |||||||||    
T  4883171 aattgttgttcccacatttggtttggctgtgtcacacgagtaaattactcaaatacccctcaacagttaactgccgaagttttagaaatacggctgcagt 4883270  T
Q  166 taactgccgaggaaaac 182  Q
    |||||||||||||||||    
T  4883271 taactgccgaggaaaac 4883287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 5750280 - 5750364
Alignment:
Q  64 aaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    ||||||| ||||||||||| | ||| |||| |||||||  |||||| |||| |||| ||||||||||||||| | ||||| ||||    
T  5750280 aaaattgctgttgacacatcttgttaggcttagaaacataagtaaaagacgtaaatgcccctcggtagttaactaccgagaaaaa 5750364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 6557908 - 6557968
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| |||||| ||||||||||   |||||  |||||||||||||||||||||||||    
T  6557908 cccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgccgaggaaaa 6557968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 19914404 - 19914520
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||||||||  ||||||| ||||||||| |  |||||||||||  ||  |||| |||||||| |||||| | |||| |    ||||||  |||||||||    
T  19914404 aattgttgttcccacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaacttccgaagttttagaaatacggctgcagt 19914503  T
Q  166 taactgccgaggaaaac 182  Q
    |||||||||||||||||    
T  19914504 taactgccgaggaaaac 19914520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 29356807 - 29356685
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagtt-------aagtgccgaggaaaaagaaatctgg 158  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||  |   ||||||||||||| ||||       || ||||||||||   ||||||  |    
T  29356807 aattgttgttcccacatgttgtttggctgagaaacacaagtaaattatccaaatacccctcggcagttaactgccaactgccgaggaatttgaaatccag 29356708  T
Q  159 ctgcagttaactgccgaggaaaa 181  Q
    |||||||||||||||||||||||    
T  29356707 ctgcagttaactgccgaggaaaa 29356685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 49395539 - 49395583
Alignment:
Q  64 aaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||    
T  49395539 aaaattgttgttgacacatttgatttggctgaaaaacacgagtaa 49395583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 52805613 - 52805538
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaacaatattatgcagaca 197  Q
    |||||||| |||||| |||||| |||   |||||| ||||| |||||| ||||||||||||||| ||||||||||||    
T  52805613 cccctcggcagttaactgccgacgaatttgaaatccggctgtagttaattgccgaggaaaacaa-attatgcagaca 52805538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 8560150 - 8560201
Alignment:
Q  3 ctttttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaa 54  Q
    ||||| ||||||||||  |||||||||||| |||||||| ||||||||||||    
T  8560150 cttttgggtggcatttcacatgggaaaggttaatccttttccaccatgggaa 8560201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 16270164 - 16270044
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa-agaaatctggc 159  Q
    ||||||||||||||  |||||| || || |||||| |||||  ||||||  || ||||||||| ||| | ||||| | |||||||||| |||||   |||    
T  16270164 ttgaaaattgttgtatacacatttgtttaggctgaaaaacataagtaaaataccaaaatacccttcgatggttaactaccgaggaaaatagaaa--cggc 16270067  T
Q  160 tgcagttaactgccgaggaaaac 182  Q
    |||||||||||||||| ||||||    
T  16270066 tgcagttaactgccgaagaaaac 16270044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 28456852 - 28456777
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||||||||||||||| ||  |||||||| ||||||||||||   ||  ||||||||||||| |||||| ||||||    
T  28456852 attgttgttgacacatatgcattggctgacaaacacgagtaatctacccaaatacccctcggcagttaactgccga 28456777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 42839620 - 42839585
Alignment:
Q  23 tgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||| |||||||||||||||||||||||||    
T  42839620 tgggaaaggttaatcctttcccaccatgggaaagtt 42839585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 43011760 - 43011847
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    |||| ||||||||||  ||| | ||||||||||| |  |||||||||||  ||  ||||||||||||| |||||| ||||||||||||    
T  43011760 ttgagaattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagttaactgccgaggaaaa 43011847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 43350968 - 43351015
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    |||| |||||| ||||| ||||||||||||||||||| ||||||||||    
T  43350968 ggtgtcatttaacatggaaaaggtgaatcctttcccatcatgggaaag 43351015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 45781046 - 45780999
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||| ||||||||||||||||| ||  |||||||||||||||||||||    
T  45781046 ttgagaattgttgttgacacatatgcattggctgagaaacacgagtaa 45780999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 50037412 - 50037289
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaaga-aatctgg 158  Q
    ||||| ||||| |||  |||||||| |||||||||||||||||  ||||| ||  ||||||||| ||||| ||||| |||||| |      | |||||||    
T  50037412 tttgagaattgctgtatacacatgttgtttggctgagaaacacatgtaaaagataaaaatacccttcggtggttaactgccgaagttttctagaatctgg 50037313  T
Q  159 ctgcagttaactgccgaggaaaac 182  Q
    |||||||||||| |||||||||||    
T  50037312 ctgcagttaactaccgaggaaaac 50037289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 50267562 - 50267609
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    |||| ||||||||||||| |||||||||||||| ||||||||| ||||    
T  50267562 ggtgacatttaccatggggaaggtgaatccttttccaccatggaaaag 50267609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 51288880 - 51288939
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    |||||||| |||||| | ||||||||  ||||||| |||||||||||||||| |||||||    
T  51288880 cccctcggcagttaactaccgaggaattagaaatccggctgcagttaactgcggaggaaa 51288939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 586722 - 586624
Alignment:
Q  84 tggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||| |  |||||||||||  ||  |||||||| |||| |||||| |||||| |    ||||||  ||||||||||||||||||||||||||    
T  586722 tggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 586624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 20349444 - 20349510
Alignment:
Q  116 aaataccc-ctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| ||||| |||||| | ||||||||   |||||| |||||||||||||||||||||||||    
T  20349444 aaataccctctcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 20349510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 38878529 - 38878579
Alignment:
Q  84 tggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagtta 134  Q
    |||||||||||||||||||  ||||| |||||||||||| ||||| |||||    
T  38878529 tggtttggctgagaaacacatgtaaaagacgaaaatacctctcggcagtta 38878579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 1403757 - 1403724
Alignment:
Q  25 ggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||| |||||||||||||||||||||||||    
T  1403757 ggaaaggttaatcctttcccaccatgggaaagtt 1403724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 5329062 - 5329099
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacga 104  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  5329062 attgttgttcacacatttggtttggctgagaaacacga 5329099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 7782777 - 7782728
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||  |||||||||| ||||||||||||||    
T  7782777 ggtggcatttcacatgggaaaggccaatcctttcctaccatgggaaagtt 7782728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 8560816 - 8560779
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  8560816 catgggaaaggttaatcctttcccaccatggaaaagtt 8560779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 9710599 - 9710632
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  9710599 agaaatccggctgcagttaactgccgaggaaaac 9710632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 19161913 - 19161946
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  19161913 agaaatccggctgcagttaactgccgaggaaaac 19161946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 22346061 - 22346023
Alignment:
Q  157 ggctgcagttaactgccgaggaaaacaatattatgcagaca 197  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  22346061 ggctgcagttaactgccgaggaaaaca--attatgcagaca 22346023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 23276188 - 23276127
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||| ||||||  | ||||| |||| |||||||||||||||||||||    
T  23276188 cccctcggcagttaactgctgaggaattaaaaatccggctacagttaactgccgaggaaaac 23276127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 35616823 - 35616770
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||| | ||||||||| || | |||||||||||||||||||| ||||    
T  35616823 ggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagtctttt 35616770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 42838949 - 42838986
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  42838949 catggtaaaggttaatcctttcccaccatgggaaagtt 42838986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 43368909 - 43368872
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  43368909 catgggaaaggttaattctttcccaccatgggaaagtt 43368872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 52859862 - 52859825
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  52859862 catgggaaaggttaatcctttccaaccatgggaaagtt 52859825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 185
Target Start/End: Complemental strand, 4518433 - 4518405
Alignment:
Q  157 ggctgcagttaactgccgaggaaaacaat 185  Q
    |||||||||||||||||||||||||||||    
T  4518433 ggctgcagttaactgccgaggaaaacaat 4518405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 9711722 - 9711670
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| ||||||||||  ||||||| ||  ||||||||||||||||||||||    
T  9711722 agttaactgccgaggaattagaaatccggtcgcagttaactgccgaggaaaac 9711670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 11183188 - 11183240
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| ||| ||||||  | ||||| ||||||||||||||||||||||||||    
T  11183188 agttaactgctgaggaattaaaaatccggctgcagttaactgccgaggaaaac 11183240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 13535758 - 13535686
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaa 135  Q
    ||||||||  ||||||||||||||| | ||||||||| |||||||||  || |||||| || |||| ||||||    
T  13535758 gaaaattgacgttgacacatgtggtatcgctgagaaatacgagtaaaatactaaaatatccttcggcagttaa 13535686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 27485052 - 27485112
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| |||||| |||| |||||  | ||||| |||||||||||||||||||| ||||    
T  27485052 cccctcggcagttaactgcctaggaattaaaaatccggctgcagttaactgccgagaaaaa 27485112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 30905764 - 30905820
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagg 177  Q
    |||||||| |||||| ||||||| ||   |||||| |||||||||||||||||||||    
T  30905764 cccctcggcagttaactgccgagaaatttgaaatccggctgcagttaactgccgagg 30905820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 40152866 - 40152810
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaataccc 123  Q
    |||||||||||||| |  ||||||||||| |||||| |||||| || ||||||||||    
T  40152866 attgttgttgacactttaggtttggctgaaaaacacaagtaaaagaagaaaataccc 40152810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 43368203 - 43368235
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaa 54  Q
    ||||||||||| |||||||||||||||||||||    
T  43368203 atgggaaaggttaatcctttcccaccatgggaa 43368235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 44336251 - 44336303
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| || |||||||  ||||||  ||||||||||||||||||||||||||    
T  44336251 agttaactgtcgaggaattagaaattcggctgcagttaactgccgaggaaaac 44336303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 45780165 - 45780213
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||| ||||||||||||||||| ||  |||||||||||||| ||||||    
T  45780165 tttgagaattgttgttgacacatatgcattggctgagaaacatgagtaa 45780213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 49
Target Start/End: Complemental strand, 48620397 - 48620369
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccat 49  Q
    |||||||||||||||||||||||||||||    
T  48620397 catgggaaaggtgaatcctttcccaccat 48620369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 50036785 - 50036861
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||| ||||||||||| || |||||||||||||||| ||||||  ||  ||||  ||||||| |||||| ||||||    
T  50036785 aattgctgttgacacatttgatttggctgagaaacacaagtaaattactcaaatgtccctcggcagttaactgccga 50036861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 51461991 - 51461943
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||| ||||||| ||||||||| ||  |||||||||||||||||||||    
T  51461991 tttgagaattgttattgacacatatgcattggctgagaaacacgagtaa 51461943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 51666718 - 51666655
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaacaat 185  Q
    |||||||| |||||| ||||||| ||   |||||| |||||||||||||||| ||||||||||||    
T  51666718 cccctcggcagttaaatgccgagtaattcgaaatc-ggctgcagttaactgctgaggaaaacaat 51666655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 41933762 - 41933641
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggct 160  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||  |||| ||||||||||| |||||||||||||||||||||  || | ||||    
T  41933762 ttgaaaactgttgttgacacatcttgtttggctgagaaacacgagtaaaaaacgacaatacccctcgatagttaagtgccgaggaaaaatgaaaccggct 41933663  T
Q  161 gcagttaactgccgaggaaaac 182  Q
    |||||||||| ||||| |||||    
T  41933662 gcagttaactaccgagaaaaac 41933641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 14297080 - 14297199
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    ||||||||||||||||||||| | ||| |||| |||||||| |||||| |||| |||| | ||||||||||||||||||||| |||| |||| |||||||    
T  14297080 tgaaaattgttgttgacacatcttgttaggcttagaaacacaagtaaaagacgtaaatgctcctcggtagttaagtgccgagaaaaatgaaa-ctggctg 14297178  T
Q  162 cagttaactgccgaggaaaac 182  Q
    ||||||||| |||||||||||    
T  14297179 cagttaactaccgaggaaaac 14297199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 14315329 - 14315448
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    ||||||||||||||||||||| | ||| |||| |||||||| |||||| |||| |||| | ||||||||||||||||||||| |||| |||| |||||||    
T  14315329 tgaaaattgttgttgacacatcttgttaggcttagaaacacaagtaaaagacgtaaatgctcctcggtagttaagtgccgagaaaaatgaaa-ctggctg 14315427  T
Q  162 cagttaactgccgaggaaaac 182  Q
    ||||||||| |||||||||||    
T  14315428 cagttaactaccgaggaaaac 14315448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 40335274 - 40335153
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||||| |||||||||||||||||  ||||| ||||||||||||| ||  ||||||| ||| ||||||||| ||| | |||||     
T  40335274 gaaaattgttgtatacacatgttgtttggctgagaaacacatgtaaaagacgaaaatacccttcaatagttaactgctgaggaaaaataaaaccggctgt 40335175  T
Q  163 agttaactgccgaggaaaacaa 184  Q
    ||||||||||||||||||||||    
T  40335174 agttaactgccgaggaaaacaa 40335153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 48578291 - 48578175
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    |||||||||  |||||||| |||||| ||||||||||  ||||| |||||||||||| |||||||||||||||||||| ||||| ||| | |||||||||    
T  48578291 aattgttgtatacacatgttgtttggatgagaaacacatgtaaaagacgaaaatacctctcggtagttaagtgccgagaaaaaataaaaccggctgcagt 48578192  T
Q  166 taactgccgaggaaaac 182  Q
    ||||| |||| ||||||    
T  48578191 taactaccgaagaaaac 48578175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 181
Target Start/End: Original strand, 35075899 - 35076018
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    ||||||||| |||  |||||||| |||||||||||||||||  ||||| ||||||||||||||||| |||||||||| ||| |||||| ||| |  ||||    
T  35075899 tgaaaattgctgtatacacatgttgtttggctgagaaacacatgtaaaagacgaaaatacccctcgatagttaagtgtcgaagaaaaataaaaccagctg 35075998  T
Q  162 cagttaactgccgaggaaaa 181  Q
    ||||||||| ||||||||||    
T  35075999 cagttaactaccgaggaaaa 35076018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 10753558 - 10753436
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctg 157  Q
    ||||| ||||||||||||||||||| | ||| ||||||||||||||| ||||  || ||||||||||||| ||| |||||||||| |||||||||| |      
T  10753558 tttttaaaaattgttgttgacacatcttgttaggctgagaaacacgaataaaatactaaaatacccctcgatagataagtgccgatgaaaaagaaaacca 10753459  T
Q  158 gctgcagttaactgccgaggaaa 180  Q
     ||||||| |||| |||||||||    
T  10753458 actgcagtcaactaccgaggaaa 10753436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 10967327 - 10967205
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctg 157  Q
    ||||| ||||||||||||||||||| | ||| ||||||||||||||| ||||  || ||||||||||||| ||| |||||||||| |||||||||| |      
T  10967327 tttttaaaaattgttgttgacacatcttgttaggctgagaaacacgaataaaatactaaaatacccctcgatagataagtgccgatgaaaaagaaaacca 10967228  T
Q  158 gctgcagttaactgccgaggaaa 180  Q
     ||||||| |||| |||||||||    
T  10967227 actgcagtcaactaccgaggaaa 10967205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 15995651 - 15995776
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatct 156  Q
    ||||||| ||||| ||||  ||||||| ||||||||||||||||| ||||||  ||  ||||||||| |||| |||||| ||||||||||   ||||||     
T  15995651 tttttgagaattgctgttcccacatgttgtttggctgagaaacacaagtaaattacccaaataccccctcggcagttaaatgccgaggaatttgaaatcc 15995750  T
Q  157 ggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||||||||    
T  15995751 ggctgcagttaactgccgaggaaaac 15995776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 19069124 - 19069241
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcag 164  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||  ||  ||||||||| |||| |||||| ||||||||||   |||||| ||||||||    
T  19069124 aattgttgttcccacatgttgtttggctgagaaacacaagtaaattacccaaataccccctcggcagttaaatgccgaggaatttgaaatccggctgcag 19069223  T
Q  165 ttaactgccgaggaaaac 182  Q
    ||||||||||||||||||    
T  19069224 ttaactgccgaggaaaac 19069241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 33051791 - 33051673
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  | |||||| ||||||||||||||||| ||||||  |   ||||||| ||||||| ||||||| |||||||| ||||| | ||||||    
T  33051791 gaaaattgttgtatatacatgttgtttggctgagaaacacaagtaaattattcaaataccactcggtaattaagtgtcgaggaaatagaaaaccggctgc 33051692  T
Q  163 agttaactgccgaggaaaa 181  Q
    ||||||||||||| |||||    
T  33051691 agttaactgccgaagaaaa 33051673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 177
Target Start/End: Complemental strand, 72645 - 72529
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggct 160  Q
    |||||||||||||||||||||| |  || ||||||||||||||||||||  || ||||||||  ||||||||||| ||||||||||| |  || | | ||    
T  72645 ttgaaaattgttgttgacacatctttttaggctgagaaacacgagtaaaataccaaaataccattcggtagttaactgccgaggaaatatgaaaccgtct 72546  T
Q  161 gcagttaactgccgagg 177  Q
    |||||||||| ||||||    
T  72545 gcagttaactaccgagg 72529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 20208444 - 20208564
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  ||  ||||  ||||||| |||||| |||||| |   |  | | | |||||    
T  20208444 tgaaaattgttgttgacacatttggtttggctgagaaacacgagtaaattactcaaatgtccctcggcagttaactgccgaagtttactagaaccggctg 20208543  T
Q  162 cagttaactgccgaggaaaac 182  Q
    |||||||||||||||||||||    
T  20208544 cagttaactgccgaggaaaac 20208564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 3403805 - 3403900
Alignment:
Q  86 gtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||||||||| || ||||||  ||| |||||||| |||| |||||| ||||||||||   |||||| |||||||||||||||||||||||||    
T  3403805 gtttggctgagaaatacaagtaaattacgcaaatacccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 3403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 15999935 - 15999818
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcag 164  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||  ||  ||||||||| |||| |||||| ||||||| ||   |||||| |||||||     
T  15999935 aattgttgttcccacatgttgtttggctgagaaacacaagtaaattacccaaataccccctcggcagttaactgccgagaaatttgaaatccggctgcaa 15999836  T
Q  165 ttaactgccgaggaaaac 182  Q
    ||||||||||||||||||    
T  15999835 ttaactgccgaggaaaac 15999818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 11084145 - 11084026
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||||| ||||||||   ||||||   |||| ||||||||||||||||||||| ||||||||||||||||| |||     | ||    
T  11084145 gaaaattgttgtatacacatgttgtttggcttgaaaacacatttaaaagacgaaaatacccctcggtaggtaagtgccgaggaaaaataaaatccacggc 11084046  T
Q  163 agttaactgccgaggaaaac 182  Q
    |||||||| |||||||||||    
T  11084045 agttaactcccgaggaaaac 11084026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 46439697 - 46439586
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||  || |||||| || ||||||||||| ||| ||||||| | ||| |   |||||||    
T  46439697 aattgttgttgacacatcttgttaggctgagaaacacgagtaaaataccaaaatatccatcggtagttaactgcagaggaaacacaaaaccaactgcagt 46439598  T
Q  166 taactgccgagg 177  Q
    ||||| ||||||    
T  46439597 taactaccgagg 46439586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 18411133 - 18411179
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  18411133 gaaaattgttgttgacacatttggtttggctgagaaacacgagtaaa 18411179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 26791610 - 26791703
Alignment:
Q  90 ggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaa-gaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||||||||  ||||| ||||||||||||| ||||||||||| |||||| |||||| | || | |||||||||||||| ||||| |||||    
T  26791610 ggctgagaaacacatgtaaaagacgaaaatacccttcggtagttaactgccgaagaaaaagggaaaccggctgcagttaactaccgagaaaaac 26791703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 6790202 - 6790306
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||| || |||||||||  ||||||||| |||||||  |||||  || ||||||||| |||| |||||| ||||||||||||| ||| | |||||||||    
T  6790202 aattgctgatgacacatggtgtttggctgtgaaacacatgtaaaatactaaaatacccttcggcagttaactgccgaggaaaaataaaaccggctgcagt 6790301  T
Q  166 taact 170  Q
    |||||    
T  6790302 taact 6790306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 18884639 - 18884563
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||  ||  |||| |||||||| |||||| ||||||    
T  18884639 aattgatgttgacacatttggtttggctgagaaacacgagtaaattactcaaatgcccctcggcagttaactgccga 18884563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 50274753 - 50274812
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    |||||||| |||||| ||||||||||  ||||||| ||||||||||||||||||||||||    
T  50274753 cccctcggcagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaa 50274812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 52870204 - 52870149
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||||  ||||||||||||||||||||| ||| ||||||||||||||||    
T  52870204 ttggtggcatttcacatgggaaaggtgaatccttttccatcatgggaaagtttttt 52870149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 199313 - 199263
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  199313 tggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 199263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 25370483 - 25370429
Alignment:
Q  4 tttttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||| ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  25370483 ttttaggtggcattttacatgggaaaggttaatcctttcccaccatgggaaagtt 25370429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 36003581 - 36003667
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaa 149  Q
    ||||||||||||  | |||||| |||||||||| ||||||  ||||| ||||||||||| ||||| |||||||||| |||| |||||    
T  36003581 gaaaattgttgtatatacatgttgtttggctgaaaaacacatgtaaaagacgaaaatactcctcgatagttaagtgtcgagaaaaaa 36003667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 388753 - 388802
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  388753 ggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 388802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 9889987 - 9890048
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||||||||||   |||||| ||||||||||||||||||||||||||    
T  9889987 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 9890048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 52869459 - 52869496
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52869459 catgggaaaggtgaatcctttcccaccatgggaaagtt 52869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 50278850 - 50278803
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaacaatattatgcagaca 197  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  50278850 agaaatccggctgcagttaactgccgaggaaaacaa-attatgcagaca 50278803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 2713931 - 2713880
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||||  |||||||||||| |||||||||||||||||| ||||||    
T  2713931 ttggtggcatttcacatgggaaaggttaatcctttcccaccatggaaaagtt 2713880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 12639963 - 12640014
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||||  |||||||||||| |||||||| ||||||||||||||||    
T  12639963 ttggtggcatttcacatgggaaaggttaatccttttccaccatgggaaagtt 12640014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 3221461 - 3221423
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  3221461 catgggaaaggtgaatcctttcccacgatgggaaagttt 3221423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 8111550 - 8111508
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  8111550 aattgttgttgacacatttggtttggctgagatacacgagtaa 8111508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 11565805 - 11565847
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  11565805 attgttgttgacacatttggtttggcttagaaacacgagtaaa 11565847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 182
Target Start/End: Original strand, 33409466 - 33409577
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagtt 166  Q
    ||||||| | |||| ||| |||||||||||||||||  |||||  || |||||||||||||| |||    || |||||||||| |||   ||||||||||    
T  33409466 attgttgattacacgtgttgtttggctgagaaacacatgtaaaataccaaaatacccctcggcagt----tgtcgaggaaaaataaaatcggctgcagtt 33409561  T
Q  167 aactgccgaggaaaac 182  Q
    |||| |||||||||||    
T  33409562 aactcccgaggaaaac 33409577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 33410376 - 33410248
Alignment:
Q  55 agttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaa--gaa 152  Q
    |||| ||||| ||||| || | |||||||| |||||||||||||||||  |||||  || |||||||||||||  | |||| |  ||||||||||   ||    
T  33410376 agttgtttgagaattgctgattacacatgttgtttggctgagaaacacatgtaaaataccaaaatacccctcgacaattaactatcgaggaaaaaataaa 33410277  T
Q  153 atctggctgcagttaactgccgaggaaaac 182  Q
    ||| |||||||||||||| |||||||||||    
T  33410276 atc-ggctgcagttaactcccgaggaaaac 33410248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 33569719 - 33569769
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||||||| |||||||||||||||||| ||||||    
T  33569719 tggtggcatttcacatgggaaaggtcaatcctttcccaccatggaaaagtt 33569769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 43210317 - 43210363
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  43210317 gaaagttgttgttgacacatgtagtttggccgagaaacacgagtaaa 43210363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 198153 - 198206
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||| ||||| ||||||||||| ||| |||||||| |||||||||||    
T  198153 ggtggcatttaacatggaaaaggtgaatctttttccaccatgagaaagtttttt 198206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 199011 - 199048
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  199011 catgggaaaggttaatcctttcccaccatgggaaagtt 199048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 7988331 - 7988278
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||| |||||||||||  ||||||||| |||||| ||||||||||||    
T  7988331 ggtggcatttaacatgggaaagggaaatcctttctcaccataggaaagtttttt 7988278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 20075537 - 20075574
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  20075537 catgggaaaggttaatcctttcccaccatgggaaagtt 20075574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 43176762 - 43176721
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  43176762 attgttgttcacacatttggtttggctgagaaacacgagtaa 43176721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 48806424 - 48806465
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  48806424 attgttgttcacacatttggtttggctgagaaacacgagtaa 48806465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 52469184 - 52469135
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||||| |||||||| || || |||||||||||||||||||||||    
T  52469184 tttgaaaattgatgttgacatatttgatttggctgagaaacacgagtaaa 52469135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 55815825 - 55815874
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||||||||    
T  55815825 ggtggcatttcacatgggaaaggttaatcctttcccactatgggaaagtt 55815874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 55816524 - 55816487
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  55816524 catgggaaaggttaatcctttcccaccatgggaaagtt 55816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 21023011 - 21022907
Alignment:
Q  78 cacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagg 177  Q
    ||||| ||||||||||| |  |||||||||||  ||  |||| |||||||| |||||| |||||| |    ||||||  |||||||||||||||||||||    
T  21023011 cacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgagg 21022912  T
Q  178 aaaac 182  Q
    |||||    
T  21022911 aaaac 21022907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 28322252 - 28322176
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||||||||| ||  |||||||||||||||||||||   ||  ||||  |||||||||||||| ||||||    
T  28322252 aattgttgttgacacatatgcattggctgagaaacacgagtaatttactcaaatgtccctcggtagttaactgccga 28322176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 35428286 - 35428238
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagt 57  Q
    ||||||||||   ||||||||||| ||||||||||||||||||||||||    
T  35428286 ggtggcatttcagatgggaaaggttaatcctttcccaccatgggaaagt 35428238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 181
Target Start/End: Complemental strand, 1044570 - 1044539
Alignment:
Q  150 gaaatctggctgcagttaactgccgaggaaaa 181  Q
    ||||||||||||||||||||||||||||||||    
T  1044570 gaaatctggctgcagttaactgccgaggaaaa 1044539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 4768671 - 4768726
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgag 176  Q
    |||||||| |||||| ||||||||||    ||||||||||||||||||||||||||    
T  4768671 cccctcggcagttaactgccgaggaattcaaaatctggctgcagttaactgccgag 4768726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 10729337 - 10729384
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||    
T  10729337 tgaaaattgttgttgacacatcttgttaggttgagaaacacgagtaaa 10729384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 10943106 - 10943153
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||    
T  10943106 tgaaaattgttgttgacacatcttgttaggttgagaaacacgagtaaa 10943153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 20422143 - 20422178
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    |||||||||||| |||||||||||||||||||||||    
T  20422143 catgggaaaggttaatcctttcccaccatgggaaag 20422178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 27872318 - 27872393
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||| |||||||| || ||||||||||||||||||||||||||  ||  ||||| || |||| |||||| ||||||    
T  27872318 attgatgttgacatatttggtttggctgagaaacacgagtaaattactcaaatatccatcggcagttaactgccga 27872393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 30042474 - 30042529
Alignment:
Q  125 tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    |||| |||||||||||||||||| | |||  |||||||||||||||||||| ||||    
T  30042474 tcggcagttaagtgccgaggaaataaaaaattggctgcagttaactgccgaagaaa 30042529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 39844896 - 39844943
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    ||||||||||  ||||||||||| ||||||||||||||||| ||||||    
T  39844896 ggtggcatttcacatgggaaaggggaatcctttcccaccataggaaag 39844943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 40833712 - 40833629
Alignment:
Q  99 acacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||||||  ||  ||||||||||||| |||||| |||||| |    ||||||  ||||||||||||||||||||||||||    
T  40833712 acacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 40833629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 18501739 - 18501781
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgg 51  Q
    ||||||||||  |||||||||||| ||||||||||||||||||    
T  18501739 ggtggcatttcacatgggaaaggttaatcctttcccaccatgg 18501781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 28157519 - 28157561
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| ||  |||||||||||||||||||||    
T  28157519 aattgttgttgacacatatgtattggctgagaaacacgagtaa 28157561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 31876787 - 31876837
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||||||| |||||||| ||||||||| ||||||    
T  31876787 tggtggcatttcacatgggaaaggttaatccttttccaccatggaaaagtt 31876837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 36111290 - 36111256
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaa 55  Q
    |||||||||||| ||||||||||||||||||||||    
T  36111290 catgggaaaggttaatcctttcccaccatgggaaa 36111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 40061296 - 40061254
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||| || |||||||||||||| ||||||||||    
T  40061296 aattgttgttgacatatttggtttggctgagacacacgagtaa 40061254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 40962892 - 40962934
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| ||  |||||||||||||||||||||    
T  40962892 aattgttgttgacacatatgcattggctgagaaacacgagtaa 40962934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 48091186 - 48091132
Alignment:
Q  4 tttttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||| ||||||||||   ||||||||||| |||| ||||||||||||||||||||    
T  48091186 ttttaggtggcatttcatatgggaaaggttaatcttttcccaccatgggaaagtt 48091132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 389479 - 389442
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  389479 catgggaaaggttaatcctttcccaccatggaaaagtt 389442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 3220530 - 3220567
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  3220530 atgggaaaggtgaatcctttcccatcataggaaagttt 3220567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 8109352 - 8109445
Alignment:
Q  90 ggctgagaaacacgagtaaaggacgaaaata-cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||  ||||   || ||||| ||||||||| || |||||||  | | ||| |||| |||||||||||||||||||||    
T  8109352 ggctgagaaacacgagtaaaatacgattttacccccttggtagttaactgtcgaggaattaaatatccggctacagttaactgccgaggaaaac 8109445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 11334338 - 11334375
Alignment:
Q  25 ggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  11334338 ggaaaggtgaatcctttcccactatgggaaactttttt 11334375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 11367192 - 11367151
Alignment:
Q  15 atttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||    
T  11367192 atttaccatgggaaacgtgaatccttttccaccgtgggaaag 11367151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 12640660 - 12640623
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||| | |||||||||||||||||||||||||    
T  12640660 catgggaaagcttaatcctttcccaccatgggaaagtt 12640623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 16984213 - 16984180
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  16984213 agaaatccggctgcagttaactgccgaggaaaac 16984180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 30703953 - 30703998
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||| ||||||||||| ||||| |||||||| ||||||||||    
T  30703953 gaaaattgatgttgacacatttggttaggctgagacacacgagtaa 30703998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 33758161 - 33758120
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    |||||||||||| |||||||||||||||||| || |||||||    
T  33758161 catgggaaaggtcaatcctttcccaccatggaaatgtttttt 33758120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 34530821 - 34530792
Alignment:
Q  149 agaaatctggctgcagttaactgccgagga 178  Q
    ||||||||||||||||||||||||||||||    
T  34530821 agaaatctggctgcagttaactgccgagga 34530792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 36945297 - 36945260
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  36945297 catgggaaaggttaatccttttccaccatgggaaagtt 36945260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 37856878 - 37856837
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||| |||||| |||||||||| ||||||||||||||    
T  37856878 attgttgttcacacatttggtttggctaagaaacacgagtaa 37856837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 39588085 - 39588142
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagga 178  Q
    |||||||| |||||| ||||||||||  ||||||  | ||||||||||||||||||||    
T  39588085 cccctcggcagttaactgccgaggaattagaaattcgactgcagttaactgccgagga 39588142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 40847677 - 40847726
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  ||||| |||||| ||||||||||||||||| |||||||    
T  40847677 ggtggcatttcacatggaaaaggttaatcctttcccaccatgagaaagtt 40847726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 180
Target Start/End: Original strand, 44010499 - 44010616
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||||| |||||||||||||| ||  |||||  |||||||||   |||||||||||| || || ||||    ||| | | ||||    
T  44010499 gaaaattgttgtatacacatgttgtttggctgagaaatacatgtaaaatacgaaaatatttctcggtagttaactgtcgtggaagtttaaaaccgactgc 44010598  T
Q  163 agttaactgccgaggaaa 180  Q
    |||||||| |||||||||    
T  44010599 agttaactaccgaggaaa 44010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 48090478 - 48090515
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  48090478 catgggaaaggttaatccattcccaccatgggaaagtt 48090515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 49889704 - 49889737
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||||| |||||||||||||||||||||||    
T  49889704 agaaatctggttgcagttaactgccgaggaaaac 49889737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 52597502 - 52597539
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  52597502 catgggaaaggttaatcttttcccaccatgggaaagtt 52597539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 55407922 - 55407873
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||| ||||| | ||||||||| ||||| ||||||||||||||||||||    
T  55407922 tttgagaattgctattgacacatttggttaggctgagaaacacgagtaaa 55407873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 1041932 - 1041988
Alignment:
Q  125 tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||| |||||| ||||||||||  ||||||| | |||||||||||||||||| ||||    
T  1041932 tcggcagttaactgccgaggaattagaaatccgactgcagttaactgccgagaaaaa 1041988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 31242862 - 31242818
Alignment:
Q  90 ggctgagaaacacgagtaaaggacgaaaatacccctcggtagtta 134  Q
    |||||||||||||  ||||| ||||||||||||| ||||||||||    
T  31242862 ggctgagaaacacatgtaaaagacgaaaatacccttcggtagtta 31242818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 34371475 - 34371515
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    |||||||||| ||||  ||||||||||||||||||||||||    
T  34371475 atgggaaaggggaattgtttcccaccatgggaaagtttttt 34371515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 43175663 - 43175715
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||  |||| ||||||||||| ||||||||||||||| || |||||||    
T  43175663 ttttttgagtattgctgttgacacatttggtttggctgagaagcatgagtaaa 43175715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 46562530 - 46562490
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaaca 101  Q
    ||||| |||||||||||||||| |||||||||| |||||||    
T  46562530 ttgaacattgttgttgacacatttggtttggctaagaaaca 46562490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 55407857 - 55407813
Alignment:
Q  137 tgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    ||||||||||  | ||||| |||||||||||||||||||||||||    
T  55407857 tgccgaggaattaaaaatccggctgcagttaactgccgaggaaaa 55407813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 31496169 - 31496288
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||||| |||||||||||||||||  ||||| ||| ||||||||| ||||||||||| || |||||||||| ||| | ||||||    
T  31496169 gaaaattgttgtatacacatgttgtttggctgagaaacacatgtaaaagacaaaaatacccttcggtagttaactgtcgaggaaaaataaaaccggctgc 31496268  T
Q  163 agttaactgccgaggaaaac 182  Q
    ||||| || |||||||||||    
T  31496269 agttatctaccgaggaaaac 31496288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 31501555 - 31501674
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||||| |||||||||||||||||  ||||| ||| ||||||||| ||||||||||| || |||||||||  ||| | ||||||    
T  31501555 gaaaattgttgtatacacatgttgtttggctgagaaacacatgtaaaagacaaaaatacccttcggtagttaactgtcgaggaaaattaaaaccggctgc 31501654  T
Q  163 agttaactgccgaggaaaac 182  Q
    ||||| || |||||||||||    
T  31501655 agttatctaccgaggaaaac 31501674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 31517028 - 31516909
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    |||||||| |||  |||||||| |||||||| ||||||||  ||||| || |||||||||||||||||||||| ||||||||||||| |||    |||||    
T  31517028 gaaaattgatgtatacacatgttgtttggctaagaaacacatgtaaaagatgaaaatacccctcggtagttaactgccgaggaaaaataaaagcagctgc 31516929  T
Q  163 agttaactgccgaggaaaac 182  Q
    |||||||| |||||||||||    
T  31516928 agttaactcccgaggaaaac 31516909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 17596879 - 17596994
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    |||| |||||||||||   ||||||||||||||||| ||||||  || |||||||||| || | |||||| || |||||||||| ||| | |||||||||    
T  17596879 attgctgttgacacatcatgtttggctgagaaacaccagtaaaataccaaaataccccctctgcagttaactgtcgaggaaaaataaaaccggctgcagt 17596978  T
Q  166 taactgccgaggaaaa 181  Q
    ||||||||||||||||    
T  17596979 taactgccgaggaaaa 17596994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 3385142 - 3385095
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  3385142 ttgaaaattgttgttgacacgtgtggtttggctgagaaacacgagtaa 3385095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 31480297 - 31480416
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||||| ||||||| |||||||||  ||||| | | ||||||||| ||||||||||| || |||||||||| ||| |  |||||    
T  31480297 gaaaattgttgtatacacatgttgtttggccgagaaacacatgtaaaagtcaaaaatacccttcggtagttaactgtcgaggaaaaataaaaccagctgc 31480396  T
Q  163 agttaactgccgaggaaaac 182  Q
    ||||| || || ||||||||    
T  31480397 agttatctacccaggaaaac 31480416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 31516057 - 31516176
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  ||| |||| |||||||||||||||||  ||||| ||  |||||||||||||||||| || || |||||||||| ||| | || | |    
T  31516057 gaaaattgttgtatacatatgttgtttggctgagaaacacatgtaaaagataaaaatacccctcggtagtcaactgtcgaggaaaaataaaaccggttac 31516156  T
Q  163 agttaactgccgaggaaaac 182  Q
    ||||||||  ||||||||||    
T  31516157 agttaactttcgaggaaaac 31516176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 35096610 - 35096691
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    ||||||||| |||||| |||||||| |||||||||||||||||  ||  |||| ||| ||||||||||| ||||||||||||    
T  35096610 attgttgtttacacatttggtttggttgagaaacacgagtaaattactcaaatgcccttcggtagttaactgccgaggaaaa 35096691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 29286222 - 29286296
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaa-aagaaatctggctgcagttaactgccgaggaaaacaatattatgcagaca 197  Q
    ||||||||||||||| ||||||||||| |||||| | || ||||||||||||||||||||||||  ||||||||||||    
T  29286222 cccctcggtagttaactgccgaggaaataagaaacc-ggttgcagttaactgccgaggaaaaca--attatgcagaca 29286296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 8193348 - 8193228
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccct-cggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    |||||||||||||||||||| ||    || |||||||||| |||||| |||| |||| ||||| | | |||||| ||||||||||  | |||   |||||    
T  8193348 gaaaattgttgttgacacatatgagaaggttgagaaacaccagtaaaagacgtaaatgcccctgcagcagttaactgccgaggaattaaaaacacggctg 8193249  T
Q  162 cagttaactgccgaggaaaac 182  Q
    |||||||||||||||||||||    
T  8193248 cagttaactgccgaggaaaac 8193228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 18347034 - 18347094
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| |||||| ||||||||||   |||||| |||||||||||||||||||||||||    
T  18347034 cccctcggcagttaactgccgaggaatctgaaatccggctgcagttaactgccgaggaaaa 18347094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 13936727 - 13936677
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||| |||||  |||||||||||| |||||||||||||||||||||||||    
T  13936727 tggtgccatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 13936677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 14124856 - 14124810
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||    
T  14124856 gaaaattgttgttgacacatttgatttggctaagaaacacgagtaaa 14124810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 3177493 - 3177530
Alignment:
Q  65 aaattgttgttgacacatgtggtttggctgagaaacac 102  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3177493 aaattgttgttgacacatttggtttggctgagaaacac 3177530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 31768746 - 31768807
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||||||||||  | ||||| |||||||||||| |||||||||||||    
T  31768746 cccctcggcagttaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaac 31768807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 109
Target Start/End: Complemental strand, 32643504 - 32643459
Alignment:
Q  64 aaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  32643504 aaaattgttgttgacacatcttgttaggctgagaaacacgagtaaa 32643459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 33668221 - 33668270
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  33668221 ggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagtt 33668270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 13388818 - 13388727
Alignment:
Q  86 gtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||| ||||||      |||||||||||||||||||| ||||||| ||    ||||  ||||||||||||||| ||||||||||    
T  13388818 gtttggctgagaaacacaagtaaac-----aaatacccctcggtagttaactgccgagaaatttcaaattcggctgcagttaactgtcgaggaaaac 13388727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 26184744 - 26184624
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||| ||||||||  |  |||||| ||| |  ||||||  || |||||||||||  | |||||| || |||||||||| ||| | ||||||    
T  26184744 gaaaattgttgttcacacatgttatagggctgaaaaatatcagtaaaataccaaaatacccctttgcagttaactgtcgaggaaaaataaaaccggctgc 26184645  T
Q  163 agttaactgccgaggaaaaca 183  Q
    |||||||| |||| |||||||    
T  26184644 agttaactaccgatgaaaaca 26184624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 28362802 - 28362750
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| ||||||||||   |||||| ||||||||||||||||||||||||||    
T  28362802 agttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 28362750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 31791420 - 31791460
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacac 102  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  31791420 tgaaaattgttgttgacatatgtggtttgactgagaaacac 31791460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 455402 - 455449
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||| ||||||||||||||||| ||  |||||||||||||||||||||    
T  455402 ttgagaattgttgttgacacatatgcattggctgagaaacacgagtaa 455449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 9391281 - 9391230
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||  ||||||| | ||||||||||||||||| |||||    
T  9391281 ttttttgaaaattgttgaagacacatttagtttggctgagaaacactagtaa 9391230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 11119579 - 11119626
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    |||||||||||||||||||||| | |||| ||| ||||||||||||||    
T  11119579 ggtggcatttaccatgggaaagtttaatctttttccaccatgggaaag 11119626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 5523932 - 5523882
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    ||||||||||  |||||||||||| |||| ||||||||||| |||||||||    
T  5523932 ggtggcatttcacatgggaaaggttaatcttttcccaccattggaaagttt 5523882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 15888934 - 15888892
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||| |||| |||||| |||||||||||||||||||||||||    
T  15888934 aattgatgtttacacatttggtttggctgagaaacacgagtaa 15888892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 31151089 - 31151044
Alignment:
Q  150 gaaatctggctgcagttaactgccgaggaaaacaatattatgcagac 196  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||||    
T  31151089 gaaatccggctgcagttaactgccaaggaaaacaa-attatgcagac 31151044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 456181 - 456100
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||| ||||| ||||||||||| ||  |||||||||||||||||||||   ||  |||| |||||||| |||||| ||||||    
T  456181 ttgagaattgctgttgacacatatgcattggctgagaaacacgagtaatttacccaaatgcccctcggcagttaactgccga 456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 6032170 - 6032207
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  6032170 catgggaaaggttaatcctttcccactatgggaaagtt 6032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 11157649 - 11157690
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||| |||||| |||||||||||||||| ||||||||    
T  11157649 attgttgttcacacatttggtttggctgagaaatacgagtaa 11157690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 21604050 - 21603969
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccg 141  Q
    |||||||||||||||| ||||||||| ||  ||||| | |||  |||||| ||| |||||||||||| | |||||| |||||    
T  21604050 tttgaaaattgttgttcacacatgtgtttaagctgaaacacattagtaaaagaccaaaatacccctctgcagttaactgccg 21603969  T

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Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 29061289 - 29061346
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagga 178  Q
    |||||||| |||||| ||||||||||  ||||||  |||||||||||||| |||||||    
T  29061289 cccctcggcagttaactgccgaggaattagaaattcggctgcagttaacttccgagga 29061346  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 29065733 - 29065782
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaact 170  Q
    |||||||| |||||| ||||||||||  ||||||| ||||||||||||||    
T  29065733 cccctcggcagttaactgccgaggaattagaaatccggctgcagttaact 29065782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 29074746 - 29074795
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaact 170  Q
    |||||||| |||||| ||||||||||  ||||||| ||||||||||||||    
T  29074746 cccctcggcagttaactgccgaggaattagaaatccggctgcagttaact 29074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 29079510 - 29079559
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaact 170  Q
    |||||||| |||||| ||||||||||  ||||||| ||||||||||||||    
T  29079510 cccctcggcagttaactgccgaggaattagaaatccggctgcagttaact 29079559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 29107319 - 29107368
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaact 170  Q
    |||||||| |||||| ||||||||||  ||||||| ||||||||||||||    
T  29107319 cccctcggcagttaactgccgaggaattagaaatccggctgcagttaact 29107368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 30611431 - 30611382
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||| |||| || |||||||||||||||||||||||||    
T  30611431 ggtggcatttcacatgagaaatgttaatcctttcccaccatgggaaagtt 30611382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 31146375 - 31146428
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaaca 183  Q
    |||||| ||||||||||   |||||| ||||||||||||||| |||||||||||    
T  31146375 agttaactgccgaggaatttgaaatccggctgcagttaactgtcgaggaaaaca 31146428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 32034504 - 32034459
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||| ||||||||||| |||||||||  ||||||||||||||    
T  32034504 gaaaattgatgttgacacatttggtttggccaagaaacacgagtaa 32034459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 32079019 - 32079060
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatg 50  Q
    ||||||||||  ||||||||||||||||||||| ||||||||    
T  32079019 ggtggcatttcacatgggaaaggtgaatccttttccaccatg 32079060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 2109475 - 2109571
Alignment:
Q  86 gtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||| |  |||||||||||  ||  ||||||| ||||| |||||| |||||| |    ||||||  ||||||||||||||||||||||||||    
T  2109475 gtttggctgtgccacacgagtaaattactcaaatacctctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 2109571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 3178188 - 3178132
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaat 119  Q
    |||||||||||||||||||| | |||||| ||||||||||  ||||| ||| |||||    
T  3178188 gaaaattgttgttgacacatttagtttggttgagaaacacatgtaaaagacaaaaat 3178132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 6760995 - 6760891
Alignment:
Q  78 cacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagg 177  Q
    ||||| ||||||||||| |  |||||||||||  ||  |||| ||||| ||||||||| |||||| |    ||||||  |||||||||||| ||||||||    
T  6760995 cacatttggtttggctgtgccacacgagtaaattactcaaatgccccttggtagttaactgccgaagttttagaaatacggctgcagttaattgccgagg 6760896  T
Q  178 aaaac 182  Q
    |||||    
T  6760895 aaaac 6760891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 24085159 - 24085279
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctg 157  Q
    |||| |||||||||||||||||||| | |||  || ||||||||| | ||||   | |||  |||||||| ||||||| ||||||||||| |  || | |    
T  24085159 ttttagaaaattgttgttgacacatcttgttacgcggagaaacacaaataaatatcaaaataacccctcgttagttaactgccgaggaaatacgaaaccg 24085258  T
Q  158 gctgcagttaactgccgagga 178  Q
     |||||||||||| |||||||    
T  24085259 actgcagttaactaccgagga 24085279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 31771793 - 31771761
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaa 181  Q
    ||||||| |||||||||||||||||||||||||    
T  31771793 agaaatccggctgcagttaactgccgaggaaaa 31771761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 37893121 - 37893226
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||||| |||||||| ||||||||  ||||| ||||||||||||||||||||||||| ||||||||||||| ||| | |||||     
T  37893121 gaaaattgttgtatacacatgttgtttggctaagaaacacatgtaaatgacgaaaatacccctcggtagttaactgccgaggaaaaataaaaccggctgt 37893220  T
Q  163 agttaa 168  Q
    ||||||    
T  37893221 agttaa 37893226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 25515947 - 25515861
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaa 149  Q
    ||||| |||||||||||||| | |||||||||||||||| ||||||| ||||| |||||||||||||||||||||| | ||||||||    
T  25515947 gaaaactgttgttgacacattttgtttggctgagaaacatgagtaaaagacgacaatacccctcggtagttaagtgacaaggaaaaa 25515861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 182
Target Start/End: Complemental strand, 31568706 - 31568601
Alignment:
Q  77 acacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgag 176  Q
    |||||||| |||||||||||||||||  |||||  || |||||||||||||| |||||| |  |||||||||| ||||| |||||||||||||| ||||     
T  31568706 acacatgttgtttggctgagaaacacatgtaaaatactaaaatacccctcggcagttaattatcgaggaaaaataaatccggctgcagttaactaccgaa 31568607  T
Q  177 gaaaac 182  Q
    ||||||    
T  31568606 gaaaac 31568601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 7780472 - 7780400
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaa 135  Q
    |||||||||||||| ||||| |||||||||||||||||||  ||||| ||||||||| |||||||||||||||    
T  7780472 gaaaattgttgttggcacatttggtttggctgagaaacacatgtaaaagacgaaaatgcccctcggtagttaa 7780400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 182
Target Start/End: Original strand, 14456440 - 14456556
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    |||| |||||||||||   ||||||||||||||||| ||||||  || |||||||||| || | |||||| ||||||| ||||| ||| | |||||||||    
T  14456440 attgctgttgacacattatgtttggctgagaaacaccagtaaaataccaaaataccccctctgcagttaactgccgagcaaaaataaaaccggctgcagt 14456539  T
Q  166 taactgccgaggaaaac 182  Q
    |||||||||||||||||    
T  14456540 taactgccgaggaaaac 14456556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 40539233 - 40539125
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaata-cccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||  || |||||| ||||||| ||||||| ||||||||||| |  || ||| |||    
T  40539233 gaaaattgttgttgacacatcttgttaggctgagaaacacgagtaaaataccaaaatatcccctcgatagttaactgccgaggaaatatgaaactgactg 40539134  T
Q  162 cagttaact 170  Q
    |||||||||    
T  40539133 cagttaact 40539125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 32471939 - 32471993
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagttttttg 63  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  32471939 ggtggcatttaacatgggaaaggtggatcctttcccaccatgggaaagttttttg 32471993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 142
Target Start/End: Complemental strand, 38779781 - 38779699
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||||||| |||||||||||||| |||||||||||||||||||  || || |||||||||| ||||||| |||||| ||||||    
T  38779781 tttgaaaactgttgttgacacatttggtttggctgagaaacacatgtgaaagacgaaaatatccctcggcagttaactgccga 38779699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 4286032 - 4286108
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  ||  |||||||| |||| |||||| ||||||    
T  4286032 aattgttgttgacacatgttgtttggctgagaaacacgagtaaattactcaaatacccatcggcagttaactgccga 4286108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 37893507 - 37893423
Alignment:
Q  64 aaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    |||||||||||  |||||||| |||||||| ||||||||  ||||| || ||||||||| |||||||||||| ||||||||||||    
T  37893507 aaaattgttgtatacacatgttgtttggctaagaaacacatgtaaaagatgaaaataccactcggtagttaactgccgaggaaaa 37893423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 40220569 - 40220653
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||||  ||  |||||| |||||| |||||| ||||||    
T  40220569 tttttgagaattgttgttgacacatgttgtttggctgagaaacactagtaaattacccaaatactcctcggcagttaactgccga 40220653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 3803667 - 3803564
Alignment:
Q  78 cacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgag 176  Q
    ||||||| ||||||||||||||||| ||||||  ||  ||||| ||| |||| |||||| ||||||||||   |||||| ||||||||||||||||||||    
T  3803667 cacatgttgtttggctgagaaacacaagtaaattacccaaatatcccatcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgag 3803568  T
Q  177 gaaa 180  Q
    ||||    
T  3803567 gaaa 3803564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 3795286 - 3795391
Alignment:
Q  78 cacatgtggtttggctgagaaacacgagtaaaggacgaaaata-cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgag 176  Q
    ||||||| ||||||||||||||||| ||||||  ||   |||| |||||||| |||||| || |||||||   |||||| ||||||||||||||||||||    
T  3795286 cacatgttgtttggctgagaaacacaagtaaattacttgaatatcccctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgag 3795385  T
Q  177 gaaaac 182  Q
    ||||||    
T  3795386 gaaaac 3795391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 26544124 - 26544048
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  |   ||||||| ||||| |||||| ||||||    
T  26544124 aattgttgttgacacatgttgtttggctgagaaacacgagtaaattatccaaatacctctcggcagttaactgccga 26544048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 7779584 - 7779695
Alignment:
Q  68 ttgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagtta 167  Q
    ||||||||||||||| |||||||||||||||||||  ||||| || ||||||| || |||| |||||| ||||||  |  | | |||| |||||||||||    
T  7779584 ttgttgttgacacatttggtttggctgagaaacacatgtaaaagatgaaaatatccttcggcagttaactgccga--attatggaatc-ggctgcagtta 7779680  T
Q  168 actgccgaggaaaac 182  Q
    ||| |||||||||||    
T  7779681 actaccgaggaaaac 7779695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 19694172 - 19694291
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    |||||||| |||| ||||||||  |  ||||||||||||| ||||||  || |||||||||| || |||||||| || |||| ||||| ||| | |||||    
T  19694172 gaaaattgctgttcacacatgttatagggctgagaaacaccagtaaaataccaaaataccccctctgtagttaactgtcgagaaaaaacaaaaccggctg 19694271  T
Q  162 cagttaactgccgaggaaaa 181  Q
    ||||||||| ||||||||||    
T  19694272 cagttaactaccgaggaaaa 19694291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 40055312 - 40055431
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    |||||||||||||||||||| ||    |||||| ||||||  ||||| ||||||| |||||||||  |||||| |  |||||||||  ||| | ||||||    
T  40055312 gaaaattgttgttgacacatatgcaaaggctgataaacacatgtaaaagacgaaattacccctcgacagttaactatcgaggaaaactaaaaccggctgc 40055411  T
Q  163 agttaactgccgaggaaaac 182  Q
    |||||||| |||||||||||    
T  40055412 agttaactaccgaggaaaac 40055431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 9224265 - 9224315
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  9224265 tggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 9224315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 4387046 - 4386997
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  4387046 ggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 4386997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 43743876 - 43743835
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  43743876 catgggaaaggtgaatcctttcccaccatgggaaactttttt 43743835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 4286836 - 4286760
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||||||||||||||||||  |||||||||||||||| ||||||  ||  ||||||||||||  |||||| ||||||    
T  4286836 aattgttgttgacacatgttctttggctgagaaacactagtaaattactcaaatacccctcgacagttaactgccga 4286760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 4769100 - 4769048
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagttttt 61  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||    
T  4769100 ggtggcatttaacatggaaaaggggaatcctttcccaccataggaaagttttt 4769048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 19848260 - 19848140
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggct 160  Q
    |||||||||||||   ||| |||| |||||| ||||||||||  ||||| ||| ||||||  | ||| ||||||| ||||||||||||| ||| | || |    
T  19848260 ttgaaaattgttgcatacatatgttgtttggttgagaaacacatgtaaaagacaaaaatattcttcgatagttaactgccgaggaaaaataaaaccggtt 19848161  T
Q  161 gcagttaactgccgaggaaaa 181  Q
    |||||||||| ||||| ||||    
T  19848160 gcagttaactaccgagaaaaa 19848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 31567899 - 31567983
Alignment:
Q  86 gtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaact 170  Q
    |||||||||||||||||| |||||  || |||||| ||||||| |||||| || |||| ||||| ||||| | ||||||||||||    
T  31567899 gtttggctgagaaacacgtgtaaaataccaaaatatccctcggcagttaactgtcgagaaaaaataaatccgactgcagttaact 31567983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 36255852 - 36255732
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccct-cggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    |||||||||||||||||||| ||    ||||||||||||| |||||| |||| |||| ||||| ||| |||||| || |||||||  | |||   || ||    
T  36255852 gaaaattgttgttgacacatatgagaaggctgagaaacaccagtaaaagacgtaaattcccctgcggcagttaactgtcgaggaattaaaaacacggttg 36255753  T
Q  162 cagttaactgccgaggaaaac 182  Q
    |||||||||||||||||||||    
T  36255752 cagttaactgccgaggaaaac 36255732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 36510991 - 36510875
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||||||||  ||| | ||||||||||| |  |||||||||||  ||  ||||||||||||| |||||| |||||| |    ||||||  |||||||||    
T  36510991 aattgttgttcccacttttggtttggctgtgtcacacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatacggctgcagt 36510892  T
Q  166 taactgccgaggaaaac 182  Q
    |||||||||||||||||    
T  36510891 taactgccgaggaaaac 36510875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 38945755 - 38945815
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| |||||| ||||||||||   |||||| |||||||||||||||||||||||||    
T  38945755 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 38945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 14565253 - 14565214
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgggaaa 55  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  14565253 tttaacatgggaaaggtgaatcctttcccaccatgggaaa 14565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 30803156 - 30803037
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    |||||||||||||  ||||| ||||||||||| |  |||||||||||  ||  ||||  ||||||| |||||| |||||| |    ||||||  ||||||    
T  30803156 gaaaattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaagttttagaaatacggctgc 30803057  T
Q  163 agttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||    
T  30803056 agttaactgccgaggaaaac 30803037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 31974384 - 31974267
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaa-gaaatctggctg 161  Q
    |||||||| ||||||||||| | ||| | || |||||||| |||||| ||   |||| | ||||||||||||  ||||||||||||| |||||| |||||    
T  31974384 gaaaattgctgttgacacatcttgttag-cttagaaacacaagtaaaagatataaatgctcctcggtagttacctgccgaggaaaaatgaaatc-ggctg 31974287  T
Q  162 cagttaactgccgaggaaaa 181  Q
    ||||||||| ||||||||||    
T  31974286 cagttaactaccgaggaaaa 31974267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 14002458 - 14002500
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  14002458 attgctgttgacacatttggtttggctgagaaacacgagtaaa 14002500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 20244258 - 20244208
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||||||| |||||||||||||||||| ||||||    
T  20244258 tggtggcatttcacatgggaaaggttaatcctttcccaccatggaaaagtt 20244208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 1096588 - 1096649
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||  ||||| ||||||||||   |||||| ||||||||||||||||||||||||||    
T  1096588 cccctcggctgttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 1096649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 6849300 - 6849337
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  6849300 catgggaaaggttaatcctttcccaccatgggaaagtt 6849337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 6849628 - 6849579
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  ||||| |||||| |||||||||||||||||||||||||    
T  6849628 ggtggcattttacatggaaaaggttaatcctttcccaccatgggaaagtt 6849579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 7716671 - 7716720
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  ||||||||| || |||||||||||||||||||||||||    
T  7716671 ggtggcatttcacatgggaaatgttaatcctttcccaccatgggaaagtt 7716720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 10883299 - 10883336
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  10883299 catgggaaaggttaatcctttcccaccatgggaaagtt 10883336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 16571130 - 16571167
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  16571130 catgggaaaggttaatcctttcccaccatgggaaagtt 16571167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 27276454 - 27276393
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||| ||||||   |||||| ||||||||||||||||||||||||||    
T  27276454 cccctcggcagttaactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaac 27276393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 28223788 - 28223837
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||||||||||||||| ||||||||    
T  28223788 ggtggcatttcacatgggaaaggttaatcctttcccaccataggaaagtt 28223837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 28224462 - 28224425
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  28224462 catgggaaaggttaatcctttcccaccatgggaaagtt 28224425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 29905396 - 29905441
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||    
T  29905396 gaaaattgttgttgacacatatgcattggctgagaaacacgagtaa 29905441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 30271035 - 30271128
Alignment:
Q  90 ggctgagaaacacgagtaaaggacgaaaatacccct-cggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||| |||||| |||  |||||||||| ||||||||||  |  ||||||  | ||||| |||||||||||||||| |||||||||    
T  30271035 ggctgagaaacactagtaaaagaccgaaataccccttcggtagttaaaggttgaggaattaaaaatccggctgcagttaactgctgaggaaaac 30271128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 33001915 - 33001967
Alignment:
Q  56 gttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||| ||||||||||| ||||||| ||  |||||||||||||||||||||    
T  33001915 gttttttaaaaattgttgtcgacacatatgcattggctgagaaacacgagtaa 33001967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 40221265 - 40221189
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||| |||||||||||||  ||||||||||| |||||||||||  ||  ||||| ||||||| |||||| ||||||    
T  40221265 aattgctgttgacacatgttctttggctgagatacacgagtaaattacttaaatatccctcggcagttaactgccga 40221189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 174
Target Start/End: Original strand, 36254949 - 36255063
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccct-cggtagttaagtgccgaggaa-aaagaaatctgg 158  Q
    |||||||||| ||||||||||| ||    ||||||||||||| |||||| |||| |||| ||||| ||| |||||| ||||||||||   | ||||| ||    
T  36254949 ttgaaaattgatgttgacacatatgagaaggctgagaaacaccagtaaaagacgtaaatgcccctgcggaagttaattgccgaggaatttaaaaatc-gg 36255047  T
Q  159 ctgcagttaactgccg 174  Q
    ||||||||||||||||    
T  36255048 ctgcagttaactgccg 36255063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 37294274 - 37294321
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||||| | | |||||||||| ||||||||||||    
T  37294274 ttgaaaattgttgttgacacgtttagtttggctgataaacacgagtaa 37294321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 42946913 - 42946960
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    ||||||||||| |||||||| | ||| |||||||||||||||||||||    
T  42946913 ggtggcatttaacatgggaaggatgattcctttcccaccatgggaaag 42946960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 43313494 - 43313451
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  43313494 aattgctgttggcacatgttgtttggctgagaaacacgagtaaa 43313451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 7583880 - 7583830
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||||||| |||| |||||||| |||||||||||    
T  7583880 tggtggcatttcacatgggaaaggttaatcttttcccactatgggaaagtt 7583830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 8113383 - 8113337
Alignment:
Q  12 ggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||  |||||||||||| |||||||| ||||||||||||||||    
T  8113383 ggcatttcacatgggaaaggttaatccttttccaccatgggaaagtt 8113337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 9958790 - 9958740
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||| | ||||||||||||||||  |||||||    
T  9958790 tggtggcatttaacatgggaaagatcaatcctttcccaccataagaaagtt 9958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 20951131 - 20951069
Alignment:
Q  116 aaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagga 178  Q
    |||| ||| |||| |||||| ||||||||||   |||||| ||||||||||||||||||||||    
T  20951131 aaatgcccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgagga 20951069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 23409578 - 23409520
Alignment:
Q  124 ctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||| |||||| ||||||||||    ||| ||||||||||||||||||||||||||||    
T  23409578 ctcggcagttaattgccgaggaattcaaaaactggctgcagttaactgccgaggaaaac 23409520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 43978306 - 43978260
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||||||  |||||| |||||| ||||||||||    
T  43978306 tgaaaattgttgttgacacattaggtttgactgagacacacgagtaa 43978260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 44829365 - 44829315
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||| |||||||||||| ||||||| ||||||||    
T  44829365 tggtggcatttcacatgggaatggtgaatccttttccaccataggaaagtt 44829315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 3595258 - 3595295
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  3595258 catgggaaaggttaattctttcccaccatgggaaagtt 3595295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 5276465 - 5276518
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||| | ||||||||| || | |||||||||||||||||||| ||||    
T  5276465 ggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagtctttt 5276518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 7190003 - 7189970
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  7190003 agaaatccggctgcagttaactgccgaggaaaac 7189970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 7717358 - 7717321
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  7717358 catgggaaaggttaatcctttctcaccatgggaaagtt 7717321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 12206800 - 12206837
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  12206800 catgggaaaggttaatcctttcccaccatgagaaagtt 12206837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 16544310 - 16544351
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||| |||||| ||||||||| |||||||||||||||    
T  16544310 attgttgttcacacatttggtttggccgagaaacacgagtaa 16544351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 16887595 - 16887632
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  16887595 catgggaaaggttaatcctttcccaccatgggatagtt 16887632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 28139691 - 28139650
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||| |||||| || ||||||||||||||||||||||    
T  28139691 attgttgttcacacatttgatttggctgagaaacacgagtaa 28139650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 43618534 - 43618627
Alignment:
Q  90 ggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaaga-aatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||   | ||| |||||||||| || ||||||||||| |||| | |||||||  || | |||||||||||||| |||||||||||    
T  43618534 ggctgagaaacatatgcaaaagacgaaaatatccttcggtagttaactgccaaagaaaaagggaaaccggctgcagttaactaccgaggaaaac 43618627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 18950582 - 18950534
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    |||||||||||   |||| |||||| |||||||||||||||||||||||    
T  18950582 tggtggcatttcatatggaaaaggttaatcctttcccaccatgggaaag 18950534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 28491915 - 28491883
Alignment:
Q  17 ttaccatgggaaaggtgaatcctttcccaccat 49  Q
    ||||||||||||||||||||||||| |||||||    
T  28491915 ttaccatgggaaaggtgaatccttttccaccat 28491883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 39477398 - 39477362
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  39477398 atgggaaaggttaatcatttcccaccatgggaaagtt 39477362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 40156337 - 40156413
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||   |||| ||||||||||||||||||||||||||  ||  |||| |||||||  |||||| ||||||    
T  40156337 aattgttgttcctacatttggtttggctgagaaacacgagtaaattactcaaatgcccctcgacagttaattgccga 40156413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 35555316 - 35555226
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaa 147  Q
    |||||||| ||||||||||||||||| | ||| ||||||||||||| ||||||  || ||||||||||||||||||||| |||||||||||    
T  35555316 ttttttgagaattgttgttgacacatcttgttaggctgagaaacacaagtaaaataccaaaatacccctcggtagttaactgccgaggaaa 35555226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 33483630 - 33483512
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    |||||||| |||  |||||||| |||||| ||||||||||  ||||| |||||||||| ||||| |||||||| |||||| |||||| ||| | ||||||    
T  33483630 gaaaattgatgtatacacatgtcgtttggttgagaaacacatgtaaaagacgaaaatatccctcagtagttaactgccgaagaaaaataaaaccggctgc 33483531  T
Q  163 agttaactgccgaggaaaa 181  Q
    ||||||||  |||||||||    
T  33483530 agttaactatcgaggaaaa 33483512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 35555576 - 35555458
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatct 156  Q
    |||||| | |||||||||| |||||| | ||| | ||||||||||||||||||  || ||||||||||||||||||||| ||||||||||| |  || |     
T  35555576 tttttttagaattgttgttaacacatcttgttagactgagaaacacgagtaaaataccaaaatacccctcggtagttaactgccgaggaaacatgaaacc 35555477  T
Q  157 ggctgcagttaactgccga 175  Q
    |||||||||||||| ||||    
T  35555476 ggctgcagttaactaccga 35555458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 45133411 - 45133292
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaa-gaaatctggctg 161  Q
    ||||||||||| |||||||| | ||| |||| |||||||| |||||| |||| |||| ||| |||| |||||| || |||||||||| |||||| |||||    
T  45133411 gaaaattgttgctgacacatcttgttaggcttagaaacacaagtaaaagacgtaaatgcccttcggcagttaactgtcgaggaaaaatgaaatc-ggctg 45133313  T
Q  162 cagttaactgccgaggaaaac 182  Q
    ||||||||| |||||||||||    
T  45133312 cagttaactaccgaggaaaac 45133292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 27411609 - 27411692
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaa 149  Q
    ||||||||||||||||| |||||||||||||||||||  ||||| |||||||||||||||||  |||||| | ||||| |||||    
T  27411609 aattgttgttgacacatttggtttggctgagaaacacatgtaaaagacgaaaatacccctcgacagttaactaccgagaaaaaa 27411692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 33482698 - 33482816
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||| | |||||||||||||||||  ||||| ||||||||||||  ||||||||||| || | || ||||| |||   ||||||    
T  33482698 gaaaattgttgtatacacatattgtttggctgagaaacacatgtaaaagacgaaaatacctttcggtagttaactgtctagaaaaaataaaatcggctgc 33482797  T
Q  163 agttaactgccgaggaaaa 181  Q
    |||||| ||||||||||||    
T  33482798 agttaattgccgaggaaaa 33482816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 39277599 - 39277520
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |   |||| |||||||| |||||| ||||||    
T  39277599 gaaaattgttgttgacacatttggtttggctgagaaacacgagtaaattattcaaatgcccctcggcagttaactgccga 39277520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 5680554 - 5680469
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    ||||||||||||  ||||||||  ||||||||||||||||  ||||| ||| ||||||||| ||| |||||||||| |||||||||    
T  5680554 gaaaattgttgtatacacatgttctttggctgagaaacacatgtaaaagacaaaaatacccttcgatagttaagtgtcgaggaaaa 5680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 39831094 - 39831170
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||||||||| |||||||||||||| ||||||||||   ||  |||| ||||||||||||||| ||||||    
T  39831094 aattgttgttgacacatttggtttggctgagacacacgagtaatttacctaaatgcccctcggtagttaactgccga 39831170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 4174027 - 4174094
Alignment:
Q  68 ttgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaa 135  Q
    |||||||||||||||||||||||||||||||||||| |||||  || |||||| |  |||||||||||    
T  4174027 ttgttgttgacacatgtggtttggctgagaaacacgggtaaaatactaaaatatctttcggtagttaa 4174094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 37326897 - 37326980
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaag 150  Q
    |||||||||||||||| || |||||||||||||||    |||| |||| | ||||| ||||| |||||||||||||||||||||    
T  37326897 attgttgttgacacatttgatttggctgagaaacatatataaaagacgcagatacctctcggcagttaagtgccgaggaaaaag 37326980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 33114279 - 33114225
Alignment:
Q  4 tttttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||| ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  33114279 ttttcggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 33114225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 37651755 - 37651797
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  37651755 attgttgttgacacatttggtttggctgagaaacacgagtaaa 37651797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 4395121 - 4395060
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaat 119  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||  ||||| ||| |||||    
T  4395121 tttttgaaaattgttgttgacgcatttggtttggctgagaaacacatgtaaaagacaaaaat 4395060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 7818474 - 7818523
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  7818474 ggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 7818523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 31948152 - 31948103
Alignment:
Q  59 ttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  31948152 ttttgaaaattgttgttgacagatgtggtttgactgagaaacatgagtaa 31948103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 43433811 - 43433860
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  43433811 ggtggcatttaacatgggaaaggggaatcatttcccaccatgggaaagtt 43433860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 43434750 - 43434701
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  43434750 ggtggcatttaacatgggaaaggtgaatcttttcccaccatggaaaagtt 43434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 39513321 - 39513253
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaa 135  Q
    |||||||||||||||| ||||||| ||||||||||||||||||  ||  |||| |||||||| ||||||    
T  39513321 attgttgttgacacatttggtttgactgagaaacacgagtaaattactcaaatgcccctcggcagttaa 39513253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 41743883 - 41743958
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaacaatattatgcagaca 197  Q
    ||||||| ||||||| ||||||||||   |||||| ||||||||||||||||||| |||||| | ||||||||||||    
T  41743883 cccctcgatagttaactgccgaggaatttgaaatccggctgcagttaactgccgaagaaaacta-attatgcagaca 41743958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 6013837 - 6013884
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  6013837 tgaaaattgatgttgacacatttggtttggctgagaatcacgagtaaa 6013884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 16889193 - 16889244
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  16889193 ttggtggcatttcacatgggaaaggttaatcttttcccaccatgggaaagtt 16889244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 35237257 - 35237308
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||| |||||  |||||||||||| |||||||||||||||||||||||||    
T  35237257 ttggtgacatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 35237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 39852149 - 39852204
Alignment:
Q  4 tttttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    |||| ||||||||||   ||||||||||| ||||||||||||||||||||||||||    
T  39852149 ttttaggtggcatttcaaatgggaaaggttaatcctttcccaccatgggaaagttt 39852204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 182
Target Start/End: Complemental strand, 2335289 - 2335167
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggc 159  Q
    ||||| ||||||||||  ||||||| ||||||||| |  |||||||||||  ||  |||| |||||||| |||||| | |||| |    ||||||  |||    
T  2335289 tttgagaattgttgttcccacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagttttagaaatacggc 2335190  T
Q  160 tgcagttaactgccgaggaaaac 182  Q
    |||||||||||||||||||||||    
T  2335189 tgcagttaactgccgaggaaaac 2335167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 6013945 - 6013903
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  6013945 attgttgttgacacatttagtttggctgagaaacacgagtaaa 6013903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 13782174 - 13782216
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  13782174 attgttgttgacacatttgatttggctgagaaacacgagtaaa 13782216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 7120835 - 7120880
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||    
T  7120835 gaaaattgttattgacacatttagtttggctgagaaacacgagtaa 7120880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 11999166 - 11999117
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  11999166 ggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagtt 11999117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 41761799 - 41761848
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||||||||||||||||||| ||||    
T  41761799 ggtggcatttcacatgggaaaggttaatcctttcccaccatgggacagtt 41761848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 43591019 - 43591056
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  43591019 catgggaaaggttaatcctttcccaccatgggaaagtt 43591056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 30755743 - 30755691
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| ||||||||||||| ||| | || |||||||||||||||||||||||    
T  30755743 agttaactgccgaggaaaaataaaaccggttgcagttaactgccgaggaaaac 30755691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 31745120 - 31745196
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||| |||| || ||| |||||||||||||||||||||||||   ||  |||||||| ||||||||||| ||||||    
T  31745120 aattgctgtttacgcatttggtttggctgagaaacacgagtaatttacccaaatacccttcggtagttaactgccga 31745196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 1114736 - 1114795
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    |||||||| |||||| ||||||| ||   |||||| ||||||||||||||||||||||||    
T  1114736 cccctcggcagttaactgccgagaaatttgaaatccggctgcagttaactgccgaggaaa 1114795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 10199132 - 10199097
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgg 51  Q
    |||| |||||||||||||||||||||||||||||||    
T  10199132 tttaacatgggaaaggtgaatcctttcccaccatgg 10199097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 20859739 - 20859700
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgag 105  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  20859739 aattgttgttgacacatttggtttggctgagacacacgag 20859700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 23508532 - 23508611
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||||||| | || ||||||||||||| || ||  |||||  | ||||||||||||||| |||||| ||||||    
T  23508532 gaaaattgttgttgatatatttggtttggctgaggaatacatgtaaaatatgaaaatacccctcggcagttaactgccga 23508611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 31185585 - 31185498
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    |||| ||||||||||  ||| | ||||||||||| |  |||||||||||  ||  ||||||||||||| |||||| ||||||||||||    
T  31185585 ttgagaattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagttaattgccgaggaaaa 31185498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 32584023 - 32584106
Alignment:
Q  99 acacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||||||  ||  |||||||||||||||||||| || ||| |    ||||||  ||||||||||||||||||||||||||    
T  32584023 acacgagtaaattactcaaatacccctcggtagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaac 32584106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 38573129 - 38573094
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgg 51  Q
    |||| |||||||||||||||||||||||||||||||    
T  38573129 tttaacatgggaaaggtgaatcctttcccaccatgg 38573094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 40646192 - 40646239
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    ||||||||||| |||||||| | ||| |||||||||||||||||||||    
T  40646192 ggtggcatttaacatgggaaggatgattcctttcccaccatgggaaag 40646239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 42731764 - 42731811
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||| |||||||||| |||||| ||||||||||||||||||| |||||    
T  42731764 ttgagaattgttgtttacacatttggtttggctgagaaacacaagtaa 42731811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 52714 - 52636
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaata-cccctcggtagttaagtgcc 140  Q
    |||||||||||||||||||| | ||| |||||| || ||||||||||  || |||||| | ||||||||||||| ||||    
T  52714 gaaaattgttgttgacacatcttgttaggctgaaaatcacgagtaaaataccaaaatatctcctcggtagttaactgcc 52636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 3695308 - 3695350
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| ||  |||||||||||||||||||||    
T  3695308 aattgttgttgacacatatgcattggctgagaaacacgagtaa 3695350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 28617524 - 28617622
Alignment:
Q  84 tggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||| |  |||||||||||  ||  |||||||| |||| |||||| |||||| |    ||||||  ||||||||||||||||||||||||||    
T  28617524 tggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 28617622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 38572229 - 38572271
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||| |||||||||||| |||| ||||||||||||||||||||    
T  38572229 tttaacatgggaaaggtcaatcttttcccaccatgggaaagtt 38572271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 40075070 - 40075112
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||    
T  40075070 aattgttgttgacacatttggttaggctgagacacacgagtaa 40075112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 41858264 - 41858214
Alignment:
Q  59 ttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||| ||||||||||||||||| |  | |||||||||||||||||||||    
T  41858264 ttttgagaattgttgttgacacatttcatatggctgagaaacacgagtaaa 41858214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 42345393 - 42345447
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    |||||||||||| |||||||| || || |  ||||||||||||||||||||||||    
T  42345393 tggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagtttttt 42345447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 11998468 - 11998505
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  11998468 catgggaaaggttaatcatttcccaccatgggaaagtt 11998505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 20549312 - 20549251
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||||||||||   |||||  |||||||||||||| |||||||||||    
T  20549312 cccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactaccgaggaaaac 20549251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 22550917 - 22550884
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  22550917 agaaatccggctgcagttaactgccgaggaaaac 22550884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 30116070 - 30116033
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  30116070 catgggaaaggttaatccttttccaccatgggaaagtt 30116033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 37532576 - 37532617
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatg 50  Q
    ||||||||||  |||||||||||| |||||||||||||||||    
T  37532576 ggtggcatttcacatgggaaaggttaatcctttcccaccatg 37532617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 39601725 - 39601758
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  39601725 agaaatccggctgcagttaactgccgaggaaaac 39601758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 40740845 - 40740886
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||| |||| |||||| |||||||||||||||||||||||||    
T  40740845 attgctgttcacacatttggtttggctgagaaacacgagtaa 40740886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 40907611 - 40907648
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  40907611 catgggaaaggttaatcctttcccaccacgggaaagtt 40907648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 41472148 - 41472107
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||| |||||| || ||||||||||||||||||||||    
T  41472148 attgttgttcacacatttgatttggctgagaaacacgagtaa 41472107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 44052306 - 44052245
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||| ||||||||||   | |||| ||||||||||| || |||||||||||    
T  44052306 cccctcggtagttaattgccgaggaatttgcaatccggctgcagttacctaccgaggaaaac 44052245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 39505 - 39537
Alignment:
Q  150 gaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| ||||||||||||||||||||||||||    
T  39505 gaaatccggctgcagttaactgccgaggaaaac 39537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 5533160 - 5533044
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||||||||  ||| | || |||||||| |  |||||||||||  ||  ||||||||||| | |||||| |||||| |    ||||||  |||||||||    
T  5533160 aattgttgttcccacttttgatttggctgtgccacacgagtaaattactcaaatacccctcagcagttaactgccgaagttttagaaatacggctgcagt 5533061  T
Q  166 taactgccgaggaaaac 182  Q
    |||||||||||||||||    
T  5533060 taactgccgaggaaaac 5533044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 15824276 - 15824228
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaa 55  Q
    ||||||||||||| |||||| ||||  |||||||| |||||||||||||    
T  15824276 ttggtggcatttatcatgggtaaggctaatccttttccaccatgggaaa 15824228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 38604391 - 38604267
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctg 157  Q
    ||||||| ||||||||||  ||| | ||||||||||| |  || | ||||||  ||  ||||||||||||  |||||| |||||| |    ||||||  |    
T  38604391 tttttgagaattgttgttcccacttttggtttggctgtgccacccaagtaaattactcaaatacccctcgacagttaactgccgaagttttagaaatacg 38604292  T
Q  158 gctgcagttaactgccgaggaaaac 182  Q
    |||||||||||||||||||||||||    
T  38604291 gctgcagttaactgccgaggaaaac 38604267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 40039064 - 40039144
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaa 146  Q
    ||||||||||||||||| ||    |||||| ||||||  ||||| ||||||||||||||||  ||||||| | ||||||||    
T  40039064 aattgttgttgacacatatgcaaaggctgaaaaacacatgtaaaagacgaaaatacccctcaatagttaattaccgaggaa 40039144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 41471022 - 41471074
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||| | ||||||||||||||||| || |||||| ||| ||||||||||||    
T  41471022 tttttttagaattgttgttgacacatttgatttggccgagtaacacgagtaaa 41471074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 44062685 - 44062633
Alignment:
Q  6 tttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||||   || |||||||| |||||||| ||||||||||||||||    
T  44062685 tttggtggcatttcatataggaaaggttaatccttttccaccatgggaaagtt 44062633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 45454401 - 45454457
Alignment:
Q  123 cctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaa 179  Q
    |||||| |||||| ||||||||||   |||||| || ||||||||||||||||||||    
T  45454401 cctcggcagttaactgccgaggaatttgaaatccggatgcagttaactgccgaggaa 45454457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 47669542 - 47669658
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaa-aagaaatctggct 160  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||  || |||||||||| ||||||||||| ||||||||||| | |||||| ||||    
T  47669542 gaaaattgttgttgacacattttgttaggctgagaaacacgagtaaaataccaaaataccccttcggtagttaactgccgaggaaatacgaaatc-ggct 47669640  T
Q  161 gcagttaactgccgagga 178  Q
    | |||||||| |||||||    
T  47669641 gtagttaactaccgagga 47669658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 7953896 - 7953816
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||||||||||||| |||||| |||||||||||| ||||||  ||||| |||||||||||||||||| |||||| ||||||    
T  7953896 tgaaaattgttgttaacacatttggtttggctgataaacacatgtaaaagacgaaaatacccctcggcagttaactgccga 7953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 7974877 - 7974953
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  ||  ||||||||||||| |||||| ||||||    
T  7974877 aattgatgttgacacatgttgtttggctgagaaacacgagtaaattacccaaatacccctcggcagttaactgccga 7974953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 34139809 - 34139722
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||  ||  |||| |||||||| |||||| ||||||||||||    
T  34139809 ttgacaattgttgttgacacattgagtttggctgagaaacacgagtaaattactcaaatgcccctcggcagttaactgccgaggaaaa 34139722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 38914170 - 38914115
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagttttttg 63  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||    
T  38914170 tggtggcatttaccatagaaaaggtgaatcctttcccaccataggaaagttttttg 38914115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 42808841 - 42808731
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||||| ||||||||||||||||| ||||||  |   |||||||  || ||||||||||| |||||||| ||||| | | ||||    
T  42808841 gaaaattgttgtatacacatgttgtttggctgagaaacacaagtaaattatccaaataccattcagtagttaagtgtcgaggaaatagaaaaccgactgc 42808742  T
Q  163 agttaactgcc 173  Q
    |||||||||||    
T  42808741 agttaactgcc 42808731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 85135 - 85082
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  85135 ggtggcatttcacatgggaaaggtgaatcctttcccaccatggaaaagtttttt 85082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 20354069 - 20353949
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggct 160  Q
    |||||||||||||   ||||||||  ||||||||||||||||  ||||| |||||||||| || || |||||||||||| ||||||||  |||||   ||    
T  20354069 ttgaaaattgttgcatacacatgttatttggctgagaaacacatgtaaaagacgaaaatatccttccgtagttaagtgctgaggaaaacaaaatc-aact 20353971  T
Q  161 gcagttaactgccgaggaaaac 182  Q
    ||||||||||  ||||||||||    
T  20353970 gcagttaactatcgaggaaaac 20353949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 40140676 - 40140793
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacc-cctcggtagttaagtgccgaggaaaaagaaatctggctgcag 164  Q
    |||||||||||||||||   ||||||||||||||||| ||||||  |  |||||||  |||| | |||||| ||||||||||||| |||   |||| |||    
T  40140676 aattgttgttgacacatcatgtttggctgagaaacaccagtaaaatattaaaatacttcctctgcagttaactgccgaggaaaaataaaatcggctccag 40140775  T
Q  165 ttaactgccgaggaaaac 182  Q
    ||||||||||||||||||    
T  40140776 ttaactgccgaggaaaac 40140793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 48589737 - 48589786
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  48589737 tttgagaattgttgttgacacatgttgtttggctgagaaacacgagtaaa 48589786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 31324940 - 31324897
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  31324940 aattgttgttgacacatgtggtttgactgagaaacacgagtaaa 31324897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 45350870 - 45350956
Alignment:
Q  92 ctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagg 177  Q
    ||||||||||| ||||||  || |||||||||| || | |||||| ||||||||||||| ||| | |||||||||||||||||||||    
T  45350870 ctgagaaacaccagtaaaataccaaaataccccctctgcagttaactgccgaggaaaaataaaaccggctgcagttaactgccgagg 45350956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 618805 - 618745
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| |||||| ||||||||||   |||||| |||||||||||||||||||||||||    
T  618805 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 618745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 19804624 - 19804548
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||||||||| | |||||||||||| ||||||||||   ||  |||| ||||||||||||||| ||||||    
T  19804624 aattgttgttgacacattttgtttggctgagacacacgagtaatttacctaaatgcccctcggtagttaactgccga 19804548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 31322982 - 31323030
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  31322982 ttgaaaattgatgttgacacatgtggtttggctgagaaatacgggtaaa 31323030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 34742474 - 34742414
Alignment:
Q  122 ccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| |||||| || |||||||  ||||||||| ||||||||||||||||||||||||    
T  34742474 ccctcggcagttaattgtcgaggaattagaaatctgactgcagttaactgccgaggaaaac 34742414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 4270183 - 4270222
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgggaaa 55  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  4270183 tttaacatgggaaaggtgaatcctttcccaccatgggaaa 4270222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 24044117 - 24044078
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtttt 60  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  24044117 catgggaaaggttaatcctttcccaccatgggaaagtttt 24044078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 27453674 - 27453615
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    |||||||| |||||| ||||||||||  | ||||| ||||||||||||||||||||||||    
T  27453674 cccctcggcagttaactgccgaggaattaaaaatccggctgcagttaactgccgaggaaa 27453615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 47521350 - 47521397
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||||    
T  47521350 ttgagaattgttgttgacacatttggtttagctgagaaacacgagtaa 47521397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 11885898 - 11885940
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  11885898 attgttgttgacacatttcgtttggctgagaaacacgagtaaa 11885940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 28115612 - 28115566
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||    
T  28115612 tgaaaatttttgttgacacatttggtttggctgaaaaacacgagtaa 28115566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 84389 - 84426
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||||||||||||||||| |||||||||||    
T  84389 catgggaaaggtgaatcctttcccactatgggaaagtt 84426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 5537868 - 5537940
Alignment:
Q  124 ctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaacaatattatgcagaca 197  Q
    ||||| |||||  ||||||||||  ||||||  |||||||||||||||||||||||||||| |||||| |||||    
T  5537868 ctcggcagttagctgccgaggaattagaaattcggctgcagttaactgccgaggaaaacaa-attatgtagaca 5537940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 5541677 - 5541636
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  5541677 attgttgttgacacatttggtttggctgagacacacgagtaa 5541636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 9494886 - 9494825
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||||||||||  | ||| | ||||||||||||||||||||||||||    
T  9494886 cccctcggcagttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaac 9494825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 19816276 - 19816313
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  19816276 catgggaaaggttaatcctttcccaccatgggaaagtt 19816313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 22276150 - 22276113
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22276150 catgggaaaggttaatcctttcccaccatgggaaagtt 22276113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 23283916 - 23283875
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  23283916 catgggaaaggggaatcctttcccaccatgggaatgtttttt 23283875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 34853403 - 34853440
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  34853403 catgggaaaggttaatcctttcccaccatgggaaagtt 34853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 36682835 - 36682884
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  36682835 ggtggcatttcacatgggaaaggttaatcatttcccaccatgggaaagtt 36682884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 36683538 - 36683501
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  36683538 catgggaaaggttaatcctttcccaccatgggaaagtt 36683501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 36805473 - 36805590
Alignment:
Q  64 aaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgca 163  Q
    |||| ||||||  ||||||||||||| |||||||||||   ||||| |||||||||| |||| | ||||||| || |||| ||||| ||| | |  ||||    
T  36805473 aaaactgttgtatacacatgtggtttagctgagaaacatatgtaaaagacgaaaatatcccttgatagttaactgtcgagaaaaaataaaaccgcttgca 36805572  T
Q  164 gttaactgccgaggaaaa 181  Q
    |||| || ||||||||||    
T  36805573 gttagctaccgaggaaaa 36805590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 42456590 - 42456553
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  42456590 catgggaaaggttaatcctttcccaccatgggaaagtt 42456553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 46814417 - 46814454
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  46814417 catgggaaaggttaatcctttcccaccatgggaaagtt 46814454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 47776325 - 47776386
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||  |||||| ||||||| ||  | ||||||||||||||||||||||||||||||||    
T  47776325 cccctcgacagttaactgccgagaaattaaaaatctggctgcagttaactgccgaggaaaac 47776386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 182
Target Start/End: Complemental strand, 30846929 - 30846814
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaa----aaagaaatctggctgc 162  Q
    |||| |||||| |||| |||||||||| |||||||||||||||  ||  ||||||||||||  |||||| ||||||  ||    ||||||  | ||||||    
T  30846929 attgatgttgaaacatttggtttggctaagaaacacgagtaaattactcaaatacccctcgacagttaactgccga--aattttaaagaa--ccggctgc 30846834  T
Q  163 agttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||    
T  30846833 agttaactgccgaggaaaac 30846814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 12081337 - 12081286
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||| ||| ||||||||||||||||| ||  |||||||||||||||||||||    
T  12081337 ttttatgagaattgttgttgacacatatgtattggctgagaaacacgagtaa 12081286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 14102482 - 14102407
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||| ||||||||||| |||||||||||||||||| |||||||  ||  |||| |||||||  |||||| ||||||    
T  14102482 attgctgttgacacatttggtttggctgagaaacatgagtaaattactcaaatgcccctcgacagttaactgccga 14102407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 14412499 - 14412424
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||| ||||||||||| |||||||||||||||||| |||||||  ||  |||| |||||||  |||||| ||||||    
T  14412499 attgctgttgacacatttggtttggctgagaaacatgagtaaattactcaaatgcccctcgacagttaactgccga 14412424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 42455920 - 42455967
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaa 55  Q
    |||||||||||  |||||||||||| ||||||||||||||| ||||||    
T  42455920 tggtggcatttcacatgggaaaggttaatcctttcccaccacgggaaa 42455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 101
Target Start/End: Complemental strand, 48590474 - 48590439
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaaca 101  Q
    ||||||||||||||||||| ||||||||||||||||    
T  48590474 aattgttgttgacacatgttgtttggctgagaaaca 48590439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 556780 - 556738
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| | |||||||||||| ||||||||||    
T  556780 aattgttgttgacacattttgtttggctgagacacacgagtaa 556738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 4271276 - 4271234
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||| ||||||||||||||||||||||||||||  ||||||||    
T  4271276 tttaacatgggaaaggtgaatcctttcccaccaaaggaaagtt 4271234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 20353303 - 20353389
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    ||||||||| ||||||||||| ||    |||||||||||||  ||||| ||||||||||| | || ||| |||||||||||| ||||    
T  20353303 tgaaaattgatgttgacacatatgcaaaggctgagaaacacttgtaaaagacgaaaatactcttcagtaattaagtgccgagaaaaa 20353389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 29060780 - 29060734
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    |||| ||||||||||| ||||  ||||||||||||||||||||||||    
T  29060780 tttagcatgggaaaggggaattgtttcccaccatgggaaagtttttt 29060734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 33806650 - 33806604
Alignment:
Q  12 ggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||  |||||||||||| |||||||||||||||| ||||||||    
T  33806650 ggcatttcacatgggaaaggtcaatcctttcccaccattggaaagtt 33806604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 39318418 - 39318364
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||| |||||  ||||||||||| |||||||||||||| ||||||| |||||||    
T  39318418 tggtgacattttacatgggaaaggggaatcctttcccacaatgggaatgtttttt 39318364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 48901574 - 48901532
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| ||  |||||||||||||||||||||    
T  48901574 aattgttgttgacacatatgcattggctgagaaacacgagtaa 48901532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 4894515 - 4894548
Alignment:
Q  25 ggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||| |||||||||||||||||||||||||    
T  4894515 ggaaaggttaatcctttcccaccatgggaaagtt 4894548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 13644360 - 13644401
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||| |||||| || ||||||||||||||||||||||    
T  13644360 attgttgttcacacatttgatttggctgagaaacacgagtaa 13644401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 27855566 - 27855615
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||| |||||||||||| |||||||    
T  27855566 ggtggcatttcacatgggaaaggttaatcatttcccaccatgagaaagtt 27855615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 34139894 - 34139947
Alignment:
Q  125 tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagga 178  Q
    |||||| |||| |||||| |||  ||||||| ||||||||||||||||||||||    
T  34139894 tcggtaattaactgccgaagaattagaaatccggctgcagttaactgccgagga 34139947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 34738385 - 34738418
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||||||||||||||| |||||||||||||    
T  34738385 agaaatctggctgcagttaaatgccgaggaaaac 34738418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 34854070 - 34854033
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  34854070 catgggaaaggttaatcctttcccaccataggaaagtt 34854033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 36781587 - 36781542
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||| | || ||||||||||||| ||||||||    
T  36781587 gaaaattgttgttgacacgtttgatttggctgagaaatacgagtaa 36781542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 47814709 - 47814672
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||| | |||||||||||||||||||||||||    
T  47814709 catgggaaagcttaatcctttcccaccatgggaaagtt 47814672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 7019 - 7123
Alignment:
Q  78 cacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagg 177  Q
    ||||||| ||||||||| |  |||||||||||  ||  |||| |||||||| |||||| | |||| |    ||||||  |||||||||||||||||||||    
T  7019 cacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgagg 7118  T
Q  178 aaaac 182  Q
    |||||    
T  7119 aaaac 7123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 9491394 - 9491458
Alignment:
Q  115 aaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagga 178  Q
    |||||||||| ||||||||||| ||||||||||| |  || | |||||||||||||| |||||||    
T  9491394 aaaataccccatcggtagttaactgccgaggaaatacgaaaccggctgcagttaactaccgagga 9491458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 19816965 - 19816929
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  19816965 atgggaaaggttaatccttttccaccatgggaaagtt 19816929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 30422829 - 30422782
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    |||||||||||  |||||||||||||||| ||||||||||||| |||||    
T  30422829 tggtggcatttcacatgggaaaggtgaat-ctttcccaccatgagaaag 30422782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 36186552 - 36186489
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaacaat 185  Q
    |||||||| |||||| ||||||||||   |||| | || ||||||||||||||||||||||||||    
T  36186552 cccctcggcagttaaatgccgaggaattcgaaacc-ggttgcagttaactgccgaggaaaacaat 36186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 42499411 - 42499463
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| ||||||||||   |||||| | ||||||||||||||||||||||||    
T  42499411 agttaattgccgaggaatttgaaatccgactgcagttaactgccgaggaaaac 42499463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 2743335 - 2743452
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaata-cccctcggtagttaagtgccgaggaaaaagaaatctggctgcag 164  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||  ||  ||||| |||||||| |||||| ||||||||||   |||||| ||||||||    
T  2743335 aattgttgttcccacatgttgtttggctgagaaacacaagtaaattacccaaatatcccctcggcagttaactgccgaggaatttgaaatccggctgcag 2743434  T
Q  165 ttaactgccgaggaaaac 182  Q
    ||||||||||||||||||    
T  2743435 ttaactgccgaggaaaac 2743452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 45507520 - 45507416
Alignment:
Q  78 cacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagg 177  Q
    ||||||| |||||||||||||||||   |||| |||||||||| |||||| ||||||| ||||||||||||| |||   |||||||||||||| ||||||    
T  45507520 cacatgttgtttggctgagaaacacatataaaagacgaaaatatccctcgatagttaactgccgaggaaaaataaaatcggctgcagttaactaccgagg 45507421  T
Q  178 aaaac 182  Q
    |||||    
T  45507420 aaaac 45507416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 13743245 - 13743347
Alignment:
Q  80 catgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaa 179  Q
    ||||| |||||||||||||||||  |||||  ||  ||||||||||||| |||||| ||||||||||   |||||| |||||||||||||||||||||||    
T  13743245 catgttgtttggctgagaaacacatgtaaattacccaaatacccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaa 13743344  T
Q  180 aac 182  Q
    |||    
T  13743345 aac 13743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 6928862 - 6928751
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||  || ||||||||||| ||| ||||| || |||||||| |  || | |||||||||    
T  6928862 aattgttgttgacacatcttgttaggctgagaaacacgagtaaaataccaaaataccccttggtggttaactgtcgaggaaacacgaaaccggctgcagt 6928763  T
Q  166 taactgccgagg 177  Q
    ||||| ||||||    
T  6928762 taactaccgagg 6928751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 40872017 - 40872088
Alignment:
Q  71 ttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||||||||||| ||||||||| |||||||||  ||||| ||||||||||||||||||||||||| ||||||    
T  40872017 ttgttgacacatttggtttggcagagaaacacatgtaaaagacgaaaatacccctcggtagttaactgccga 40872088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 1294212 - 1294136
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||  ||  ||||||||||||| |||||| ||||||    
T  1294212 aattgttgttgacacatgttgtttgactgagaaacacgagtaaattacccaaatacccctcggcagttaactgccga 1294136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 45506576 - 45506696
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggct 160  Q
    |||||||||||||   |||||||| |||||||||||||||||  ||||| ||| |||||||| || | ||||||| ||||||||||||| |||   || |    
T  45506576 ttgaaaattgttgcatacacatgttgtttggctgagaaacacatgtaaaagacaaaaatacctcttgatagttaactgccgaggaaaaataaaatcggtt 45506675  T
Q  161 gcagttaactgccgaggaaaa 181  Q
    |||||||||| |||| |||||    
T  45506676 gcagttaactaccgaagaaaa 45506696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 49219869 - 49219810
Alignment:
Q  123 cctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||    
T  49219869 cctcggtagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaac 49219810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 9429965 - 9429868
Alignment:
Q  86 gtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||| ||||||  ||| ||||||||| |||| |||||| ||||||||||   ||||| ||||||||||||| | |||||||||||    
T  9429965 gtttggctgagaaacacaagtaaattacgcaaataccccctcggcagttaactgccgaggaatttgaaatttggctgcagttaagtaccgaggaaaac 9429868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 11380378 - 11380491
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcag 164  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||  |||    | |||| |||| |||||| ||||||||||  | |||| ||| |||||    
T  11380378 aattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttgccccttcggcagttaactgccgaggaattaaaaatatggttgcag 11380477  T
Q  165 ttaactgccgagga 178  Q
    ||||||||||||||    
T  11380478 ttaactgccgagga 11380491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 3944893 - 3944944
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  3944893 ttggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 3944944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 15294485 - 15294548
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaata 120  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||  ||||| ||||||||||    
T  15294485 ttttttgaaaattgttgttgacacgtttggtttggctgagaaatacatgtaaaagacgaaaata 15294548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 32592156 - 32592198
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  32592156 attgttgttgacacatttggtttggctgagaaacacgagtaaa 32592198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 42760352 - 42760302
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  42760352 tttttgagaattgttgttgacacatttggtttggctgagacacacgagtaa 42760302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 13747862 - 13747737
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatct 156  Q
    |||| ||| ||||||||||  ||||||| |||||||||| ||||||  |||||  |   |||||| |||||| |||||| |||||| |||   ||||||     
T  13747862 ttttatgagaattgttgttcccacatgttgtttggctgataaacacatgtaaattatccaaatactcctcggcagttaactgccgatgaatttgaaatcc 13747763  T
Q  157 ggctgcagttaactgccgaggaaaac 182  Q
    |||||||||||||||| |||||||||    
T  13747762 ggctgcagttaactgctgaggaaaac 13747737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 19341674 - 19341613
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||||||||||  ||||||| |||||||||||||| |||||||||||    
T  19341674 cccctcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaac 19341613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 38279421 - 38279458
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38279421 catgggaaaggtgaatcctttcccaccatgggaaagtt 38279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 40871952 - 40871843
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    |||||||| ||| |||||| |||||||||||||||||  |||||  |  ||||||||||| || |||||| | ||||||||||| |||   | |||||||    
T  40871952 aattgttgatgatacatgttgtttggctgagaaacacatgtaaaatatcaaaataccccttggcagttaactaccgaggaaaaataaaatcgcctgcagt 40871853  T
Q  166 taactgccga 175  Q
    ||||||||||    
T  40871852 taactgccga 40871843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 50957790 - 50957685
Alignment:
Q  78 cacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgag 176  Q
    ||||||| ||||||||||||||||| ||||||  |   ||||||||| || | |||||  ||||||||||   |||||| ||||||||||||||||||||    
T  50957790 cacatgttgtttggctgagaaacacaagtaaattatccaaataccccctctgcagttagctgccgaggaatttgaaatccggctgcagttaactgccgag 50957691  T
Q  177 gaaaac 182  Q
    ||||||    
T  50957690 gaaaac 50957685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 2831128 - 2831020
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    |||||||||||||  |||||||| ||||||||||||||||   ||||| |||||||||| |||||  || |||| |||||| |||||| ||| | | ||     
T  2831128 tgaaaattgttgtatacacatgttgtttggctgagaaacatatgtaaaagacgaaaatatccctcaataattaactgccgatgaaaaataaaaccgacta 2831029  T
Q  162 cagttaact 170  Q
    |||||||||    
T  2831028 cagttaact 2831020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 14044033 - 14043917
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    |||||||||| |||||| | |||||||||||||||||||||||   ||  |||||||| |||| |||||| || ||| |    |||||   |||||||||    
T  14044033 aattgttgtttacacatttagtttggctgagaaacacgagtaatttacccaaatacccttcggcagttaactgtcgaagttttagaaaatcggctgcagt 14043934  T
Q  166 taactgccgaggaaaac 182  Q
    |||||||||||||||||    
T  14043933 taactgccgaggaaaac 14043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 7941049 - 7941124
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||| |||||| |||||||||||||||||||||||||   ||  |||||||| |||| |||||| ||||||    
T  7941049 attgttgttcacacatttggtttggctgagaaacacgagtaatttacctaaatacccttcggcagttaactgccga 7941124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 26494631 - 26494588
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||| |||| ||||||||||||||||||||||||||    
T  26494631 aattgttgttgatacatttggtttggctgagaaacacgagtaaa 26494588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 27739709 - 27739586
Alignment:
Q  59 ttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctgg 158  Q
    |||||| ||||||||||  ||| | ||||||||||| |  |||||||||||  ||  |||||||| |||| |||||| |||||| |    ||||||  ||    
T  27739709 ttttgagaattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacgg 27739610  T
Q  159 ctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||||||    
T  27739609 ctgcagttaactgccgaggaaaac 27739586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 34691620 - 34691679
Alignment:
Q  123 cctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| |||||| ||||||||||| | ||||| ||||||||||||||| ||||||||||    
T  34691620 cctcggcagttaactgccgaggaaataaaaatccggctgcagttaactgtcgaggaaaac 34691679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 25025174 - 25025224
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    ||||||||||  |||||||||||| |||||||||||| |||||||||||||    
T  25025174 ggtggcatttcacatgggaaaggttaatcctttcccatcatgggaaagttt 25025224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 25025838 - 25025800
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  25025838 catgggaaaggttaatcctttcccaccatgggaaagttt 25025800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 32672161 - 32672215
Alignment:
Q  4 tttttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||| ||||||||||  |||||||||||| |||||||||||| ||||||||||||    
T  32672161 ttttaggtggcattttacatgggaaaggttaatcctttcccaacatgggaaagtt 32672215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 41137720 - 41137774
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaacaa 184  Q
    |||||| ||||||||||   |||||| ||||||||||||||||||||||||||||    
T  41137720 agttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacaa 41137774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 12897753 - 12897878
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatct 156  Q
    ||||| || ||||||||||  ||| | ||||||||||| |  |||||||||||  ||  ||||||||||| | |||||| |||||| |    ||||||      
T  12897753 tttttagagaattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcagcagttaactgccgaagttttagaaatac 12897852  T
Q  157 ggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||||||||    
T  12897853 ggctgcagttaactgccgaggaaaac 12897878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 23584969 - 23584920
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||||||||||||||||| ||||||    
T  23584969 ggtggcatttcacatgggaaaggttaatcctttcccaccatggtaaagtt 23584920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 23599792 - 23599743
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||||||||||||||||| ||||||    
T  23599792 ggtggcatttcacatgggaaaggttaatcctttcccaccatggtaaagtt 23599743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 30256083 - 30256022
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||| ||||||||| ||||||||||  | ||| | ||||||||||||||||||||||||||    
T  30256083 ccccttggtagttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaac 30256022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 37373965 - 37374014
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||||||||    
T  37373965 ggtggcattttacatgggaaaggttaatcttttcccaccatgggaaagtt 37374014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 41040571 - 41040624
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||  |||||||||||||||||||||| |||||||  ||||||||||    
T  41040571 ggtggcatttcacatgggaaaggtgaatcctttctcaccatgaaaaagtttttt 41040624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 50953229 - 50953354
Alignment:
Q  56 gttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaata-cccctcggtagttaagtgccgaggaaaaagaaat 154  Q
    |||||| || ||||||||||  |||| || |||| |||||||||||| | ||||  |   ||||| ||||||||||||||| |||  |||||   |||||    
T  50953229 gtttttagagaattgttgttcgcacacgttgtttagctgagaaacacaactaaattatctaaataccccctcggtagttaactgcataggaatttgaaat 50953328  T
Q  155 ctggctgcagttaactgccgaggaaa 180  Q
    | ||||||||||||||||||||||||    
T  50953329 ccggctgcagttaactgccgaggaaa 50953354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 8424007 - 8424047
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccat 49  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  8424007 ggtgtcatttaacatgggaaaggtgaatcctttcccaccat 8424047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 14016843 - 14016787
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaat 119  Q
    ||||||||||||||| |||| ||||||| |||||||||||  ||||| |||||||||    
T  14016843 gaaaattgttgttgatacatttggtttgactgagaaacacatgtaaaagacgaaaat 14016787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 24700681 - 24700773
Alignment:
Q  88 ttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    ||||||||||||||||||||||  ||  |||| | | |||| |||||| || |||||||  ||||||| || ||||||||||| |||||||||    
T  24700681 ttggctgagaaacacgagtaaattactcaaatgctcatcggcagttaactgtcgaggaattagaaatccggttgcagttaactcccgaggaaa 24700773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 42356228 - 42356272
Alignment:
Q  4 tttttggtggcatttaccatgggaaaggtgaatcctttcccacca 48  Q
    |||||||||||||||  |||||||||||| |||||||||||||||    
T  42356228 tttttggtggcatttcacatgggaaaggtcaatcctttcccacca 42356272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 52514229 - 52514305
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||||||||||||||| ||  |||||||||||||||||||||   ||  ||||||||||||| | |||| ||||||    
T  52514229 aattgttgttgacacatatgtattggctgagaaacacgagtaatttactcaaatacccctcggcaattaactgccga 52514305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 34645495 - 34645542
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||||||||||||| |   |||||||||||||||||||||    
T  34645495 ttgaaaattgttgttgacacatttaccttggctgagaaacacgagtaa 34645542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 41553395 - 41553348
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    ||||||||||| ||||||||||||||||  ||||||||||| ||||||    
T  41553395 ggtggcatttatcatgggaaaggtgaattatttcccaccataggaaag 41553348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 50330550 - 50330593
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||| |||||| |||||||||||| |||||||||||||    
T  50330550 aattgttgttcacacatttggtttggctgataaacacgagtaaa 50330593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 51325935 - 51326022
Alignment:
Q  83 gtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaact 170  Q
    |||||||| |||||||| ||  ||||| || ||||||| |||||  ||||||| || |||||||||| ||| | ||||||||||||||    
T  51325935 gtggtttgactgagaaagacatgtaaaagatgaaaatatccctcaatagttaactgtcgaggaaaaataaaaccggctgcagttaact 51326022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 8427190 - 8427156
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    |||||||||||||||||||||||| ||||||||||    
T  8427190 atgggaaaggtgaatcctttcccatcatgggaaag 8427156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 10658762 - 10658804
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||||| |||| |||||||||||||||||| |||||||    
T  10658762 attgttgttgatacatttggtttggctgagaaacatgagtaaa 10658804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 16861067 - 16861109
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||    
T  16861067 aattgctgttgacacatttggtttggctgagacacacgagtaa 16861109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 17561697 - 17561739
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  17561697 aattgttgttgacacatttgatttggctgagacacacgagtaa 17561739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 31977597 - 31977639
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| ||  |||||||||||||||||||||    
T  31977597 aattgttgttgacacatatgtattggctgagaaacacgagtaa 31977639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 41615923 - 41615881
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||    
T  41615923 aattgttgttgacacatttggtttagctgagacacacgagtaa 41615881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 43768025 - 43768079
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    |||||||||||| |||||||| || || |  ||||||||||||||||||||||||    
T  43768025 tggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagtttttt 43768079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 44868692 - 44868658
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaa 55  Q
    |||||||||||| ||||||||||||||||||||||    
T  44868692 catgggaaaggttaatcctttcccaccatgggaaa 44868658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 46187070 - 46187032
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  46187070 catgggaaaggtgaatcctttctcaccataggaaagttt 46187032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 48892262 - 48892216
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||||||| | ||| |||| |||||||||||||||    
T  48892262 gaaaattgttgttgacacatcttgttaggctaagaaacacgagtaaa 48892216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 49161849 - 49161803
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    |||| ||||||||||| ||||  ||||||||||||||||||||||||    
T  49161849 tttagcatgggaaaggggaattgtttcccaccatgggaaagtttttt 49161803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 50687782 - 50687744
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  50687782 catgggaaaggttaattctttcccaccatgggaaagttt 50687744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 55281847 - 55281881
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaa 55  Q
    |||||||||||| ||||||||||||||||||||||    
T  55281847 catgggaaaggttaatcctttcccaccatgggaaa 55281881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 4002585 - 4002524
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| | | ||||||   |||||| ||||||||||||||||||||||||||    
T  4002585 cccctcggcagttaactactgaggaatttgaaatccggctgcagttaactgccgaggaaaac 4002524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 4002680 - 4002793
Alignment:
Q  68 ttgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagtta 167  Q
    ||||||||  ||||| ||||||||||| |  |||||||||||   |  |||| |||||||| | |||| |||||| |    ||||||| |||||||||||    
T  4002680 ttgttgttcccacatttggtttggctgtgccacacgagtaaattgctcaaatgcccctcggcatttaattgccgaagttttagaaatccggctgcagtta 4002779  T
Q  168 actgccgaggaaaa 181  Q
    ||||||||||||||    
T  4002780 actgccgaggaaaa 4002793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 4004855 - 4004822
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  4004855 agaaatccggctgcagttaactgccgaggaaaac 4004822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 7841114 - 7841175
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| | |||| | ||||||||   |||||||||||||| ||||||||||||||||||    
T  7841114 cccctcggcaattaactaccgaggaatttgaaatctggctgcatttaactgccgaggaaaac 7841175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 8427817 - 8427780
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  8427817 catggggaaggttaatcctttcccaccatgggaaagtt 8427780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 11249576 - 11249543
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| |||||||||||||||||||||||||||    
T  11249576 agaaatatggctgcagttaactgccgaggaaaac 11249543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 14403050 - 14402989
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||||||||||   |||||| ||| | ||||||||||||||||||||    
T  14403050 cccctcggcagttaactgccgaggaatttgaaatccggcggtagttaactgccgaggaaaac 14402989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 23584249 - 23584286
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  23584249 catgggacaggttaatcctttcccaccatgggaaagtt 23584286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 23599072 - 23599109
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  23599072 catgggacaggttaatcctttcccaccatgggaaagtt 23599109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 29342353 - 29342390
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  29342353 catgggaaaggttaatcttttcccaccatgggaaagtt 29342390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Original strand, 41459142 - 41459179
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  41459142 catgggaaaggttaatcctttcccaccatgagaaagtt 41459179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 43478882 - 43478849
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  43478882 agaaatccggctgcagttaactgccgaggaaaac 43478849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 48250949 - 48250888
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||| ||| ||||||   ||| || ||||||||||||||||||||||||||    
T  48250949 cccctcggcagttaactgctgaggaatttgaattccggctgcagttaactgccgaggaaaac 48250888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 55385158 - 55385191
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  55385158 agaaatccggctgcagttaactgccgaggaaaac 55385191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 34543271 - 34543155
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||||||||  ||||| ||||||||||| |  ||| |||||||  ||  ||||  ||||||| |||||| |||||| |    ||||||  |||||||||    
T  34543271 aattgttgttcccacatttggtttggctgtgccacatgagtaaattactcaaatgtccctcggcagttaactgccgaagttttagaaatacggctgcagt 34543172  T
Q  166 taactgccgaggaaaac 182  Q
    |||||||||||||||||    
T  34543171 taactgccgaggaaaac 34543155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 41802895 - 41802939
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaag 110  Q
    ||||||||||||||||| |  | ||||||||||||||||||||||    
T  41802895 aattgttgttgacacatttcatatggctgagaaacacgagtaaag 41802939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 43104567 - 43104531
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  43104567 atgggaaaggtcaatcctttcccatcatgggaaagtt 43104531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 48888749 - 48888793
Alignment:
Q  137 tgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    ||||||||||  | ||||| |||||||||||||||||||||||||    
T  48888749 tgccgaggaattaaaaatccggctgcagttaactgccgaggaaaa 48888793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 51326782 - 51326726
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaat 119  Q
    |||||||| |||  |||||||| |||||||||||||||||  ||||| |||||||||    
T  51326782 gaaaattgctgtatacacatgttgtttggctgagaaacacatgtaaaagacgaaaat 51326726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 182
Target Start/End: Complemental strand, 27532756 - 27532636
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    ||||||||| || |||||||||| |||||| ||||||||||  |||||  || |||||||||||||  |||||| ||||||||||||| ||| ||| |||    
T  27532756 tgaaaattgctgatgacacatgttgtttggatgagaaacacatgtaaaataccaaaatacccctcgacagttaactgccgaggaaaaataaaactgactg 27532657  T
Q  162 cagttaactgccgaggaaaac 182  Q
    |||||||||  ||||||||||    
T  27532656 cagttaactatcgaggaaaac 27532636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 7021999 - 7021878
Alignment:
Q  60 tttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggc 159  Q
    ||||| ||||||||||  ||| ||| ||||||||||||||||| |||| |  ||| ||| |||||||||||| ||| ||| ||||||   |||||| |||    
T  7021999 tttgagaattgttgttcccacttgttgtttggctgagaaacacaagtacattacgcaaacacccctcggtagataactgctgaggaatttgaaatccggc 7021900  T
Q  160 tgcagttaactgccgaggaaaa 181  Q
    ||||||||||||||||||||||    
T  7021899 tgcagttaactgccgaggaaaa 7021878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 8539651 - 8539536
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagt 165  Q
    ||||| |||||||||||   ||||||||||||||||| ||||||  ||  ||||||||||||| |||||| |||||| |    ||||||| |||||||||    
T  8539651 aattgctgttgacacattgagtttggctgagaaacacaagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatccggctgcagt 8539552  T
Q  166 taactgccgaggaaaa 181  Q
    ||||||||||||||||    
T  8539551 taactgccgaggaaaa 8539536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 39149519 - 39149464
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  39149519 ttggtggcatttcacatgggaaaggtgaatcctttcccaccatgggaaagtttttt 39149464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 42098232 - 42098357
Alignment:
Q  58 tttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaataccc-ctcggtagttaagtgccgaggaaaaagaaatct 156  Q
    ||||||| ||||| |||| ||||||||  |  ||||||||||||  ||||||  || |||||| || ||| | |||||| ||||||||||||| ||| ||    
T  42098232 tttttgagaattgctgtttacacatgttataaggctgagaaacatcagtaaaataccaaaatatcctctctgcagttaactgccgaggaaaaataaaact 42098331  T
Q  157 ggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||||||||||||||||    
T  42098332 ggctgcagttaactgccgaggaaaac 42098357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 178
Target Start/End: Original strand, 13563617 - 13563717
Alignment:
Q  78 cacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagg 177  Q
    ||||||| |||||||||||||||||  |||||  ||  ||||||||||||| |||||| |||||| ||| | | |||| |||||||||||||||||||||    
T  13563617 cacatgttgtttggctgagaaacacatgtaaattacccaaatacccctcggcagttaactgccgaagaatatgtaatccggctgcagttaactgccgagg 13563716  T
Q  178 a 178  Q
    |    
T  13563717 a 13563717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 13838559 - 13838483
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||  ||  ||||||||||||| |||||| ||||||    
T  13838559 aattgctgttgacacatgttgtttggctgagaaacacgagtaaattacccaaatacccctcggcagttaactgccga 13838483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 39742507 - 39742629
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggc 159  Q
    |||| ||||| |||| ||||||||  |  ||||||||||||| ||||||  || |||||||||| || | |||||| ||||||||||||| ||| | | |    
T  39742507 ttgagaattgctgtttacacatgttatagggctgagaaacaccagtaaaataccaaaataccccctctgcagttaactgccgaggaaaaataaaaccgac 39742606  T
Q  160 tgcagttaactgccgaggaaaac 182  Q
    |||||||||||||||||||||||    
T  39742607 tgcagttaactgccgaggaaaac 39742629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 3957499 - 3957549
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  3957499 tggtggcatttcacatgggaaaggttaatcctttcccaccatgggaaagtt 3957549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 183
Target Start/End: Complemental strand, 13708071 - 13707949
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccct-cggtagttaagtgccgaggaaaaagaaatctggct 160  Q
    |||||||||||||| ||||||||  |  ||||||||||||| ||||||  || |||||||   | | | |||||| ||||||||||||| |||  |||||    
T  13708071 tgaaaattgttgttcacacatgttatagggctgagaaacaccagtaaaatactaaaatactatttctgcagttaactgccgaggaaaaataaaagtggct 13707972  T
Q  161 gcagttaactgccgaggaaaaca 183  Q
    |||||||||| ||||||||||||    
T  13707971 gcagttaactaccgaggaaaaca 13707949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 35651354 - 35651396
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  35651354 attgttgttgacacatttggtttggctgagaaacacgagtaaa 35651396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 7017449 - 7017554
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaata-cccctcggtagttaagtgccgaggaaaaagaaatctggctgcag 164  Q
    ||||||||||| ||||||| |||||||||| |||||| ||||||  ||  ||||| ||||||| ||||||| ||| ||||||   |||||| ||||||||    
T  7017449 aattgttgttgccacatgttgtttggctgaaaaacacaagtaaattacccaaataccccctcgatagttaactgctgaggaatttgaaatccggctgcag 7017548  T
Q  165 ttaact 170  Q
    ||||||    
T  7017549 ttaact 7017554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 38968092 - 38968149
Alignment:
Q  125 tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||| | |||||||| || ||||| ||||||||||||||||||||||||||    
T  38968092 tcggtagttaactaccgaggaataaaaaatccggctgcagttaactgccgaggaaaac 38968149  T

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Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 13568151 - 13568095
Alignment:
Q  125 tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    ||||||||||| ||||||||||   |||||| |||||||||||||||||||||||||    
T  13568151 tcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 13568095  T

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Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 27531856 - 27531976
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctg 161  Q
    |||||||||||||  |||||||| |||||||||||||||||   |||| |||||||||   ||||| || |||| || |||||||||| |||    ||||    
T  27531856 tgaaaattgttgtatacacatgttgtttggctgagaaacacatataaaagacgaaaatgttcctcgataattaactgtcgaggaaaaataaaatcagctg 27531955  T
Q  162 cagttaactgccgaggaaaac 182  Q
    ||||||||| | |||||||||    
T  27531956 cagttaacttcagaggaaaac 27531976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 4929593 - 4929543
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||  |||||||||||| |||||||| ||||||||||||||||    
T  4929593 tggtggcatttcacatgggaaaggttaatccttttccaccatgggaaagtt 4929543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 13665380 - 13665470
Alignment:
Q  93 tgagaaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||||| ||||||  |  |||||||||| || |||||||| ||||||||||||| ||| | |||||||||||||| | |||||||||    
T  13665380 tgagaaacaccagtaaaatatcaaaataccccctctgtagttaactgccgaggaaaaataaaaccggctgcagttaactcctgaggaaaac 13665470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 182
Target Start/End: Complemental strand, 29430683 - 29430597
Alignment:
Q  97 aaacacgagtaaaggacgaaaatacccc-tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| ||||||  || |||||||||| || | |||||| ||||||||||||| ||| | |||||||||||||||| |||||||||    
T  29430683 aaacaccagtaaaataccaaaataccccctctgcagttaactgccgaggaaaaataaaaccggctgcagttaactgctgaggaaaac 29430597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 34080207 - 34080125
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    ||||| ||||||||||||| | |||||||| |||||| ||||||  ||  ||||||||||||| |||||| ||| ||||||||    
T  34080207 aattgctgttgacacatgttggttggctgataaacacaagtaaattacccaaatacccctcggcagttaactgcagaggaaaa 34080125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 38408602 - 38408560
Alignment:
Q  66 aattgttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  38408602 aattgttgttgacacatttggtttggctgagacacacgagtaa 38408560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 40622412 - 40622495
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaa 147  Q
    ||||||||| ||||||||||| | ||| |||  |||||||||||||||  || |||||||| |||||||||||| ||| |||||||    
T  40622412 tgaaaattgctgttgacacatcttgttaggc--agaaacacgagtaaaataccaaaatacctctcggtagttaactgcagaggaaa 40622495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 4196579 - 4196648
Alignment:
Q  125 tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaacaatattatgcagaca 197  Q
    ||||||||||||||||||||||    ||||| ||||||| |||||||||||||||||||  ||||||||||||    
T  4196579 tcggtagttaagtgccgaggaatttaaaatc-ggctgcaattaactgccgaggaaaaca--attatgcagaca 4196648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 25075071 - 25075034
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  25075071 catgggaaaggttaatcctttcccaccatgggaaagtt 25075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 25133040 - 25133003
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||| |||||||||||||||||||||||||    
T  25133040 catgggaaaggttaatcctttcccaccatgggaaagtt 25133003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 29430015 - 29430076
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| | |||||| ||||||||||||| ||| | |||||||||||| |||||||||||||    
T  29430015 cccctctgcagttaactgccgaggaaaaataaaaccggctgcagttaagtgccgaggaaaac 29430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 34122521 - 34122577
Alignment:
Q  125 tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||| |||||| ||||||||||   |||||| |||||||||||||||||||||||||    
T  34122521 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 34122577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 38064139 - 38064191
Alignment:
Q  6 tttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||||||||||||  |||||||| ||||||  |||||||||||||||||||||    
T  38064139 tttggtggcatttcacatgggaagggtgaaaactttcccaccatgggaaagtt 38064191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 1397430 - 1397371
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    |||||||| |||||| ||| ||||||  ||||||| ||||||||||||||||||| ||||    
T  1397430 cccctcggcagttaactgctgaggaattagaaatccggctgcagttaactgccgatgaaa 1397371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 1970564 - 1970509
Alignment:
Q  7 ttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtttttt 62  Q
    ||||||||||||| |||||||| || || |  ||||||||||||||||||||||||    
T  1970564 ttggtggcatttagcatgggaatggagagttgtttcccaccatgggaaagtttttt 1970509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 3891454 - 3891537
Alignment:
Q  99 acacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||||||  ||  ||||||||||||| |||||| |||||| |    ||||||  ||||||||||||||||||||||||||    
T  3891454 acacgagtaaattactcaaatacccctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaac 3891537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 19228786 - 19228671
Alignment:
Q  62 tgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaat-acccctcggtagttaagtgccgaggaaaaagaaatctggct 160  Q
    ||||||||||||||||||||| || |  |||||||| |||| ||||||  ||| ||||  |||||||| |||||| |||||| |||  | ||| | || |    
T  19228786 tgaaaattgttgttgacacatttgataaggctgagacacacaagtaaaatacgtaaatgccccctcggcagttaactgccgatgaattaaaaaaccggat 19228687  T
Q  161 gcagttaactgccgag 176  Q
    ||||||||||||||||    
T  19228686 gcagttaactgccgag 19228671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 21612181 - 21612142
Alignment:
Q  17 ttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  21612181 ttaccatgggaaaggtgaatcttttcccaccataggaaag 21612142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 3958324 - 3958374
Alignment:
Q  6 tttggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaag 56  Q
    |||||||||||||   ||||||| ||||| |||||||||||||||||||||    
T  3958324 tttggtggcatttttaatgggaagggtgattcctttcccaccatgggaaag 3958374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 18512785 - 18512743
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  18512785 attgctgttgacacatttagtttggctgagaaacacgagtaaa 18512743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 40625049 - 40624968
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaa 149  Q
    |||| ||||||||||| || ||||||||||||||||   |||| |||| |||| |||||||| |||| | |||||||||||||    
T  40625049 attgctgttgacacatttgatttggctgagaaacacatataaaagacgcaaatgcccctcggcagtt-actgccgaggaaaaa 40624968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 41622112 - 41622154
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    |||||||||||||||| | ||||| ||||||||||||||||||    
T  41622112 attgttgttgacacatttagtttgactgagaaacacgagtaaa 41622154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 7757346 - 7757379
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| ||||||||||||||||||||||||||    
T  7757346 agaaatccggctgcagttaactgccgaggaaaac 7757379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 28388599 - 28388538
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||| |||||  ||||||||||   ||||||  |||||||||||||||||||||||||    
T  28388599 cccctcggcagttagctgccgaggaatttgaaatccagctgcagttaactgccgaggaaaac 28388538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 30966053 - 30966144
Alignment:
Q  90 ggctgagaaacacgagtaaaggacgaaaatacccct-cggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||||||||| |||||| ||| ||||||||| | |||||||||| ||||||||||||   || | ||||| |||||||| |||||||||||    
T  30966053 ggctgagaaacac-agtaaaagaccaaaataccctttcggtagttaactgccgaggaaaatataacc-ggctgtagttaactcccgaggaaaac 30966144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 31094556 - 31094629
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaacaatattatgcagaca 197  Q
    ||||||||||||||| || || |||||  |||| | ||||||||||||||||||| |||||||  ||||||||||||    
T  31094556 cccctcggtagttaactgtcggggaaattgaaacc-ggctgcagttaactgccgaagaaaaca--attatgcagaca 31094629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 35564204 - 35564241
Alignment:
Q  71 ttgttgacacatgtggtttggctgagaaacacgagtaa 108  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  35564204 ttgttgacacatttggtttggttgagaaacacgagtaa 35564241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 41799847 - 41799786
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||  |||||| ||| ||||||  |||||||| |||||||||||||||||| ||||||    
T  41799847 cccctcgacagttaactgctgaggaattagaaatctagctgcagttaactgccgatgaaaac 41799786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 8698837 - 8698877
Alignment:
Q  67 attgttgttgacacatgtggtttggctgagaaacacgagta 107  Q
    |||||||||||||||| | ||| ||||||||||||||||||    
T  8698837 attgttgttgacacatcttgttaggctgagaaacacgagta 8698877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 8702269 - 8702217
Alignment:
Q  130 agttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||| ||||||||||  | ||||||| |||||||||||||| |||||||||    
T  8702269 agttaactgccgaggaattaaaaatctgactgcagttaactgctgaggaaaac 8702217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8813090 - 8813126
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  8813090 atgggaaaggttaatcctctcccaccatgggaaagtt 8813126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 21770007 - 21770043
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  21770007 atgggaaaggttaatccttttccaccatgggaaagtt 21770043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 27867900 - 27867840
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| |||||| ||||||||||   ||| || |||||||||| ||||||||||||||    
T  27867900 cccctcggcagttaactgccgaggaatttgaattccggctgcagtttactgccgaggaaaa 27867840  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 37820918 - 37820874
Alignment:
Q  137 tgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    ||||||||||   |||||| |||||||||||||||||||||||||    
T  37820918 tgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 37820874  T

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Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 39148781 - 39148817
Alignment:
Q  22 atgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  39148781 atgggaaaggtgaattcttttccaccatgggaaagtt 39148817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 41065871 - 41065938
Alignment:
Q  115 aaaatacccctcggtagttaagtgccgaggaaa-aagaaatctggctgcagttaactgccgaggaaaac 182  Q
    |||||||  |||||||||||| ||||||||||| | |||||| | |||||||||||| |||||||||||    
T  41065871 aaaatacttctcggtagttaactgccgaggaaatacgaaatc-gactgcagttaacttccgaggaaaac 41065938  T

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Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 43094628 - 43094596
Alignment:
Q  149 agaaatctggctgcagttaactgccgaggaaaa 181  Q
    ||||||| |||||||||||||||||||||||||    
T  43094628 agaaatccggctgcagttaactgccgaggaaaa 43094596  T

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Target: scaffold0143 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 185
Target Start/End: Original strand, 3048 - 3170
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    |||||||| |||  |||||||| |||||| ||||||||||  ||||| |||||||||| ||||| |||||||| |||||| |||||| ||| | ||||||    
T  3048 gaaaattgatgtatacacatgtcgtttggttgagaaacacatgtaaaagacgaaaatatccctcagtagttaactgccgaagaaaaataaaaccggctgc 3147  T
Q  163 agttaactgccgaggaaaacaat 185  Q
    ||||||||  |||||||| ||||    
T  3148 agttaactatcgaggaaagcaat 3170  T

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Target: scaffold0143; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 3978 - 3860
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgc 162  Q
    ||||||||||||  |||||| | |||||||||||||||||  ||||| ||||||||||||  ||||||||||| || | || ||||| |||   ||||||    
T  3978 gaaaattgttgtatacacatattgtttggctgagaaacacatgtaaaagacgaaaatacctttcggtagttaactgtctagaaaaaataaaatcggctgc 3879  T
Q  163 agttaactgccgaggaaaa 181  Q
    |||||| ||||||||||||    
T  3878 agttaattgccgaggaaaa 3860  T

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Target: scaffold0188 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 28056 - 27975
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccga 142  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  ||  |||||||||| |  |||||| ||||||    
T  28056 ttgaaaattgttgttgacacatgtagtttggctgagaaacacgagtaaattacccaaatacccctagacagttaattgccga 27975  T

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Target: scaffold0176 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 734 - 647
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaa 148  Q
    |||| |||||||||||||||||   ||||||||||||||||||||||||  ||  |||| |||||||| |||||| ||||||||||||    
T  734 ttgacaattgttgttgacacattgagtttggctgagaaacacgagtaaattactcaaatgcccctcggcagttaactgccgaggaaaa 647  T

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Target: scaffold0176; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 819 - 872
Alignment:
Q  125 tcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgagga 178  Q
    |||||| |||| |||||| |||  ||||||| ||||||||||||||||||||||    
T  819 tcggtaattaactgccgaagaattagaaatccggctgcagttaactgccgagga 872  T

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Target: scaffold0155 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 13088 - 12963
Alignment:
Q  57 ttttttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatct 156  Q
    |||||| ||||||||||||||||||| | ||| ||||   ||||||||||||  |||  |||| | ||||||||||||| ||| ||||||| |  || |     
T  13088 tttttttaaaattgttgttgacacatcttgttaggcttcaaaacacgagtaagagacttaaattctcctcggtagttaattgctgaggaaatatgaaacc 12989  T
Q  157 ggctgcagttaactgccgaggaaaac 182  Q
    |||||||||||||| |||||||||||    
T  12988 ggctgcagttaactaccgaggaaaac 12963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 8197 - 8277
Alignment:
Q  64 aaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgagg 144  Q
    |||||||||||||| |||| | ||| |||| ||||||| ||| ||| |||  |||| ||||||||||||||| ||| ||||    
T  8197 aaaattgttgttgagacatattgttaggcttagaaacatgagcaaaagacttaaatgcccctcggtagttaactgcagagg 8277  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 17431 - 17372
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaa 180  Q
    |||||||| |||||| ||||||||||   |||||| ||||||||||||||||||||||||    
T  17431 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaa 17372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 15319 - 15270
Alignment:
Q  9 ggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||||||||  ||||| |||||| |||||||||||||||||||||||||    
T  15319 ggtggcatttcacatggaaaaggttaatcctttcccaccatgggaaagtt 15270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 16034 - 15974
Alignment:
Q  122 ccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaac 182  Q
    ||||||| |||||| ||||||||||   ||||||  |||||||||||||||||||||||||    
T  16034 ccctcggcagttaactgccgaggaatttgaaatccagctgcagttaactgccgaggaaaac 15974  T

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Target: scaffold0039 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 90614 - 90665
Alignment:
Q  8 tggtggcatttaccatgggaaaggtgaatcctttcccaccatgggaaagttt 59  Q
    |||||||||||  ||||||||||||||||| ||| ||||||| |||||||||    
T  90614 tggtggcatttcacatgggaaaggtgaatcattttccaccataggaaagttt 90665  T

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Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 32898 - 32940
Alignment:
Q  16 tttaccatgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||    
T  32898 tttaacatgggaaaggagaatcctttcccaccataggaaagtt 32940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 8151 - 8253
Alignment:
Q  80 catgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaa 179  Q
    ||||| ||||||||||||| ||| ||||||  ||  |||||| |||||| |||||| |||| |||||   |||||| || ||||||||||||| || |||    
T  8151 catgttgtttggctgagaatcacaagtaaattacccaaatactcctcggcagttaactgccaaggaatttgaaatccggatgcagttaactgctgaagaa 8250  T
Q  180 aac 182  Q
    |||    
T  8251 aac 8253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 11767 - 11833
Alignment:
Q  116 aaataccc-ctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| ||||| |||||| | ||||||||   |||||| |||||||||||||||||||||||||    
T  11767 aaataccctctcggcagttaactaccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 11833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 46670 - 46716
Alignment:
Q  63 gaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaa 109  Q
    ||||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  46670 gaaaattgttgttgacacatgaggtatggctgaaaaacacaagtaaa 46716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 11858 - 11821
Alignment:
Q  21 catgggaaaggtgaatcctttcccaccatgggaaagtt 58  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  11858 catggtaaaggttaatcctttcccaccatgggaaagtt 11821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 27575 - 27652
Alignment:
Q  61 ttgaaaattgttgttgacacatgtggtttggctgagaaacacgagtaaaggacgaaaatacccctcggtagttaagtg 138  Q
    ||||||| || || ||||| || ||||| |||||| ||||||  ||||| |||| ||||| |||||||||||||||||    
T  27575 ttgaaaaatgctgatgacatatttggttaggctgaaaaacacatgtaaaagacgcaaatatccctcggtagttaagtg 27652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 22396 - 22456
Alignment:
Q  121 cccctcggtagttaagtgccgaggaaaaagaaatctggctgcagttaactgccgaggaaaa 181  Q
    |||||||| |||||| ||||||||||   |||||  |||||||||||||||| ||||||||    
T  22396 cccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgctgaggaaaa 22456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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