View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0545_low_63 (Length: 208)
Name: NF0545_low_63
Description: NF0545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0545_low_63 |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 9949515 - 9949373
Alignment:
| Q |
1 |
ttgtatctcttttaatggtatatgtgatttatgaaaatatttaatataaattagaatatgatataccaggttttataaaccagaattcaatataaatcca |
100 |
Q |
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| T |
9949515 |
ttgtatctcttttaatggtatatgtgatttatgaaaatatttaatataaattagaatatgatataccaggttttataaaccagaattcaatataaatcca |
9949416 |
T |
|
| Q |
101 |
aaggtttattgaaccagtattgaaattaaaccagttaccatct |
143 |
Q |
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| T |
9949415 |
aaggtttattgaaccagtattgaaattaaaccagttaccatct |
9949373 |
T |
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