View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0545_low_7 (Length: 507)

Name: NF0545_low_7
Description: NF0545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0545_low_7
NF0545_low_7
[»] chr6 (35 HSPs)
chr6 (210-507)||(21629178-21629475)
chr6 (210-507)||(17605390-17605687)
chr6 (210-507)||(17576773-17577070)
chr6 (210-507)||(13938505-13938802)
chr6 (210-507)||(18681630-18681927)
chr6 (212-507)||(15956041-15956329)
chr6 (212-507)||(2554392-2554686)
chr6 (212-507)||(24766482-24766767)
chr6 (335-507)||(26206120-26206292)
chr6 (335-504)||(15674622-15674791)
chr6 (439-502)||(25351015-25351078)
chr6 (335-504)||(33640707-33640876)
chr6 (439-507)||(19350731-19350799)
chr6 (355-490)||(14843338-14843473)
chr6 (443-504)||(502821-502882)
chr6 (443-488)||(13563219-13563264)
chr6 (443-507)||(14686297-14686361)
chr6 (443-504)||(649362-649423)
chr6 (331-490)||(12673296-12673455)
chr6 (456-507)||(14372293-14372344)
chr6 (439-502)||(26514517-26514580)
chr6 (443-504)||(11060151-11060212)
chr6 (444-504)||(1104237-1104297)
chr6 (455-507)||(11469360-11469412)
chr6 (443-507)||(13086330-13086394)
chr6 (444-504)||(17078357-17078417)
chr6 (443-502)||(12687041-12687100)
chr6 (445-504)||(21549637-21549696)
chr6 (455-504)||(5390799-5390848)
chr6 (443-500)||(27104141-27104198)
chr6 (443-500)||(27145955-27146012)
chr6 (407-504)||(32186473-32186570)
chr6 (443-484)||(32198012-32198053)
chr6 (456-504)||(28575763-28575811)
chr6 (440-492)||(29056321-29056372)
[»] chr8 (37 HSPs)
chr8 (210-507)||(20825086-20825384)
chr8 (312-507)||(17700267-17700462)
chr8 (212-507)||(13878545-13878840)
chr8 (212-507)||(32267341-32267636)
chr8 (245-507)||(9923388-9923650)
chr8 (212-507)||(8300590-8300885)
chr8 (212-490)||(10530464-10530742)
chr8 (212-507)||(41664426-41664721)
chr8 (212-507)||(7925173-7925468)
chr8 (364-507)||(42176767-42176910)
chr8 (335-504)||(4987246-4987415)
chr8 (335-507)||(16375284-16375456)
chr8 (443-507)||(29721200-29721264)
chr8 (443-507)||(36157941-36158005)
chr8 (422-504)||(7453142-7453224)
chr8 (443-507)||(24794507-24794571)
chr8 (439-502)||(25193880-25193943)
chr8 (443-504)||(23942877-23942938)
chr8 (443-507)||(11393620-11393684)
chr8 (445-487)||(6245891-6245933)
chr8 (445-503)||(6901728-6901786)
chr8 (398-500)||(26774491-26774593)
chr8 (443-500)||(12341361-12341418)
chr8 (461-502)||(37165428-37165469)
chr8 (333-385)||(14345099-14345151)
chr8 (444-496)||(18187943-18187995)
chr8 (398-502)||(28453714-28453818)
chr8 (440-504)||(43612471-43612535)
chr8 (445-504)||(12135013-12135072)
chr8 (443-502)||(15539849-15539908)
chr8 (455-490)||(36025325-36025360)
chr8 (443-486)||(36493189-36493232)
chr8 (455-502)||(42451941-42451988)
chr8 (444-490)||(45255130-45255176)
chr8 (455-504)||(10800962-10801011)
chr8 (443-504)||(17659631-17659692)
chr8 (445-490)||(28992510-28992555)
[»] chr5 (35 HSPs)
chr5 (210-507)||(25856495-25856792)
chr5 (210-480)||(33385029-33385299)
chr5 (291-507)||(8299320-8299535)
chr5 (223-507)||(27796271-27796554)
chr5 (224-507)||(33170445-33170728)
chr5 (233-507)||(28534755-28535029)
chr5 (233-507)||(42514507-42514781)
chr5 (212-507)||(23239170-23239463)
chr5 (245-507)||(30731405-30731667)
chr5 (210-354)||(27165150-27165294)
chr5 (445-507)||(10780988-10781050)
chr5 (403-507)||(35983040-35983144)
chr5 (266-504)||(22094361-22094599)
chr5 (398-507)||(35121932-35122041)
chr5 (332-474)||(36256595-36256737)
chr5 (444-500)||(26261608-26261664)
chr5 (332-507)||(30509201-30509376)
chr5 (332-507)||(30549544-30549719)
chr5 (445-507)||(19506785-19506847)
chr5 (443-505)||(29572159-29572221)
chr5 (443-505)||(29573536-29573598)
chr5 (443-505)||(29574913-29574975)
chr5 (443-505)||(29576290-29576352)
chr5 (443-505)||(29577667-29577729)
chr5 (443-505)||(29579044-29579106)
chr5 (410-488)||(42260088-42260166)
chr5 (443-504)||(38358257-38358318)
chr5 (447-507)||(34481735-34481795)
chr5 (407-502)||(588299-588394)
chr5 (443-486)||(6050048-6050091)
chr5 (448-495)||(6885712-6885759)
chr5 (443-490)||(20208009-20208056)
chr5 (443-486)||(21084689-21084732)
chr5 (445-507)||(22438005-22438067)
chr5 (455-504)||(29323683-29323732)
[»] chr3 (43 HSPs)
chr3 (269-507)||(12341370-12341608)
chr3 (210-507)||(19891464-19891761)
chr3 (212-507)||(48569081-48569376)
chr3 (210-507)||(16179727-16180024)
chr3 (212-507)||(17077355-17077650)
chr3 (210-507)||(962219-962516)
chr3 (212-507)||(34331873-34332168)
chr3 (212-507)||(2365065-2365360)
chr3 (212-507)||(19919287-19919582)
chr3 (341-507)||(6175664-6175830)
chr3 (332-504)||(24925863-24926035)
chr3 (404-507)||(19876030-19876133)
chr3 (440-507)||(36731680-36731747)
chr3 (210-271)||(12334144-12334205)
chr3 (425-502)||(53942038-53942115)
chr3 (443-507)||(52907331-52907395)
chr3 (443-490)||(31675735-31675782)
chr3 (443-502)||(40513013-40513072)
chr3 (445-507)||(55367396-55367458)
chr3 (229-462)||(25785842-25786072)
chr3 (443-507)||(14863745-14863809)
chr3 (443-507)||(21739777-21739841)
chr3 (443-507)||(23819352-23819416)
chr3 (419-502)||(14309371-14309454)
chr3 (445-504)||(15481049-15481108)
chr3 (443-502)||(18381840-18381899)
chr3 (444-507)||(43120964-43121027)
chr3 (210-272)||(15313203-15313265)
chr3 (422-504)||(30166591-30166673)
chr3 (416-502)||(34830184-34830270)
chr3 (447-504)||(46907963-46908020)
chr3 (443-504)||(47538057-47538118)
chr3 (443-490)||(31920641-31920688)
chr3 (443-486)||(52250414-52250457)
chr3 (455-502)||(53504529-53504576)
chr3 (404-490)||(8130777-8130863)
chr3 (440-486)||(48930534-48930580)
chr3 (446-504)||(50545033-50545091)
chr3 (443-504)||(36709699-36709760)
chr3 (443-504)||(42674727-42674788)
chr3 (443-507)||(10868431-10868495)
chr3 (439-483)||(20797918-20797962)
chr3 (440-504)||(44888694-44888758)
[»] scaffold1350 (1 HSPs)
scaffold1350 (210-507)||(331-628)
[»] chr2 (27 HSPs)
chr2 (212-507)||(33515251-33515546)
chr2 (327-507)||(12646337-12646517)
chr2 (212-507)||(28253516-28253811)
chr2 (409-507)||(14440531-14440629)
chr2 (335-507)||(13551369-13551541)
chr2 (417-504)||(15018467-15018554)
chr2 (407-504)||(25380647-25380744)
chr2 (439-490)||(33583713-33583764)
chr2 (331-490)||(13416490-13416649)
chr2 (332-490)||(6724810-6724968)
chr2 (439-483)||(6824222-6824266)
chr2 (444-504)||(8065551-8065611)
chr2 (444-507)||(22724729-22724792)
chr2 (444-502)||(44028503-44028561)
chr2 (422-504)||(45422310-45422392)
chr2 (443-504)||(28399839-28399900)
chr2 (443-504)||(35488628-35488689)
chr2 (406-502)||(3153071-3153167)
chr2 (443-507)||(11233778-11233842)
chr2 (444-507)||(9668296-9668359)
chr2 (439-502)||(10289351-10289414)
chr2 (443-486)||(26147023-26147066)
chr2 (443-486)||(43311067-43311110)
chr2 (332-490)||(2207000-2207158)
chr2 (449-507)||(11197139-11197197)
chr2 (445-502)||(39116308-39116365)
chr2 (443-483)||(20946878-20946918)
[»] chr4 (40 HSPs)
chr4 (212-507)||(48312881-48313176)
chr4 (210-507)||(55724763-55725060)
chr4 (233-504)||(19733068-19733338)
chr4 (233-507)||(19756054-19756328)
chr4 (233-507)||(19783478-19783752)
chr4 (212-507)||(1827598-1827893)
chr4 (212-507)||(23641649-23641944)
chr4 (212-507)||(23647307-23647602)
chr4 (212-507)||(47419591-47419886)
chr4 (212-507)||(11586242-11586536)
chr4 (332-504)||(29552979-29553151)
chr4 (335-507)||(55299408-55299580)
chr4 (92-197)||(46843369-46843474)
chr4 (335-507)||(23872658-23872830)
chr4 (439-507)||(54482445-54482513)
chr4 (398-504)||(19115226-19115332)
chr4 (341-507)||(20675822-20675988)
chr4 (288-504)||(19648485-19648701)
chr4 (451-507)||(15741007-15741063)
chr4 (332-490)||(40688884-40689043)
chr4 (137-180)||(46838772-46838815)
chr4 (335-500)||(8935868-8936033)
chr4 (362-490)||(19162377-19162505)
chr4 (443-507)||(42952820-42952884)
chr4 (443-504)||(34976731-34976792)
chr4 (444-504)||(42779040-42779100)
chr4 (416-491)||(9691226-9691301)
chr4 (422-504)||(7662576-7662658)
chr4 (444-490)||(10562614-10562660)
chr4 (444-490)||(20396386-20396432)
chr4 (443-504)||(26694718-26694779)
chr4 (392-483)||(3129214-3129305)
chr4 (403-502)||(19308836-19308935)
chr4 (443-502)||(19837927-19837986)
chr4 (443-486)||(38296513-38296556)
chr4 (443-490)||(43516037-43516084)
chr4 (445-490)||(2072344-2072389)
chr4 (455-504)||(36952092-36952141)
chr4 (443-475)||(15342639-15342671)
chr4 (440-504)||(53486215-53486279)
[»] scaffold0472 (1 HSPs)
scaffold0472 (233-507)||(4039-4313)
[»] chr7 (34 HSPs)
chr7 (233-507)||(17721422-17721696)
chr7 (212-507)||(4937186-4937481)
chr7 (212-507)||(29968761-29969056)
chr7 (369-507)||(11276463-11276601)
chr7 (335-504)||(45993366-45993535)
chr7 (404-507)||(27218372-27218475)
chr7 (335-507)||(13440845-13441017)
chr7 (454-507)||(31423381-31423434)
chr7 (445-504)||(29917010-29917069)
chr7 (443-504)||(23054259-23054320)
chr7 (443-507)||(19735305-19735369)
chr7 (332-504)||(36227329-36227501)
chr7 (440-507)||(22819003-22819070)
chr7 (392-490)||(45164785-45164883)
chr7 (445-502)||(2820012-2820069)
chr7 (443-504)||(4078067-4078128)
chr7 (445-504)||(34232491-34232550)
chr7 (445-504)||(41340339-41340398)
chr7 (422-504)||(46626612-46626694)
chr7 (403-502)||(4164831-4164930)
chr7 (460-507)||(4344637-4344684)
chr7 (403-502)||(34207122-34207221)
chr7 (443-502)||(45871555-45871614)
chr7 (408-474)||(6335646-6335712)
chr7 (455-504)||(13063106-13063155)
chr7 (443-504)||(18768198-18768259)
chr7 (455-504)||(22865030-22865079)
chr7 (443-500)||(34791964-34792021)
chr7 (445-490)||(39930887-39930932)
chr7 (455-504)||(47554180-47554229)
chr7 (440-504)||(17056319-17056383)
chr7 (444-504)||(18671961-18672021)
chr7 (444-504)||(28173273-28173333)
chr7 (404-500)||(33820809-33820905)
[»] scaffold0034 (1 HSPs)
scaffold0034 (212-507)||(104901-105196)
[»] chr1 (31 HSPs)
chr1 (212-507)||(6051390-6051685)
chr1 (212-507)||(35541821-35542116)
chr1 (212-507)||(47622135-47622430)
chr1 (335-507)||(5497873-5498045)
chr1 (335-507)||(32352493-32352665)
chr1 (335-507)||(48072607-48072779)
chr1 (345-504)||(25504183-25504342)
chr1 (441-507)||(20796447-20796513)
chr1 (443-507)||(39431073-39431137)
chr1 (443-490)||(3544390-3544437)
chr1 (443-490)||(17708862-17708909)
chr1 (439-490)||(28358695-28358746)
chr1 (362-480)||(51052695-51052813)
chr1 (443-488)||(5809387-5809432)
chr1 (440-504)||(3074534-3074598)
chr1 (443-507)||(49264254-49264318)
chr1 (443-502)||(20987947-20988006)
chr1 (443-490)||(26721437-26721484)
chr1 (443-502)||(48434942-48435001)
chr1 (440-486)||(45271049-45271095)
chr1 (445-490)||(1247877-1247922)
chr1 (444-504)||(7396010-7396070)
chr1 (443-507)||(19042910-19042974)
chr1 (443-490)||(13867129-13867176)
chr1 (443-502)||(33259991-33260050)
chr1 (443-502)||(33280150-33280209)
chr1 (439-502)||(36099726-36099789)
chr1 (441-483)||(40562845-40562887)
chr1 (441-502)||(23450914-23450975)
chr1 (444-504)||(10710494-10710553)
chr1 (440-504)||(22191068-22191132)
[»] scaffold0189 (1 HSPs)
scaffold0189 (416-483)||(6902-6969)
[»] scaffold0048 (1 HSPs)
scaffold0048 (416-502)||(63562-63648)
[»] scaffold0007 (1 HSPs)
scaffold0007 (443-490)||(182919-182966)
[»] scaffold0418 (1 HSPs)
scaffold0418 (422-504)||(8394-8476)
[»] scaffold0179 (2 HSPs)
scaffold0179 (443-488)||(8338-8383)
scaffold0179 (443-488)||(13272-13317)
[»] scaffold0112 (1 HSPs)
scaffold0112 (443-504)||(14950-15011)
[»] scaffold1809 (1 HSPs)
scaffold1809 (447-495)||(1093-1141)
[»] scaffold0016 (1 HSPs)
scaffold0016 (443-486)||(28582-28625)
[»] scaffold0131 (1 HSPs)
scaffold0131 (422-484)||(3816-3878)


Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 210 - 507
Target Start/End: Original strand, 21629178 - 21629475
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  21629178 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaaattccgtttctatacttgggcctcccgattag 21629277  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  21629278 aggtaatccgcgccggttattattttgggagcctattgttaattgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgc 21629377  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  21629378 ttgatacttctcaaatctgtcttgactgcgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttctattgaatccttgtt 21629475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 210 - 507
Target Start/End: Original strand, 17605390 - 17605687
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17605390 ttggggtcaacattaatgtctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 17605489  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||| ||||||     
T  17605490 aggtaatccgcgccgtttattattttgggagcctattgttaatcgtataaagtctagattgtctagttggcataataggtacctttcctttggtggtcgt 17605589  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  17605590 ttgatacttctcaaatctgtcttgactgcgcttcctgtctatgcgctttcctttttcaaagctccatcaggtataatctcttctattgaatctttgtt 17605687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 210 - 507
Target Start/End: Original strand, 17576773 - 17577070
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17576773 ttggggtcaacattaatgtcccgtggttgtctgaggcggcttctttgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 17576872  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| | |||||    
T  17576873 aggtaatccgagccggttattattttgggagcctattgttaaacgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtagtcgc 17576972  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| || ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17576973 ttgattctgctcaaatctgtcttgactgcgcttcctgtctattcactttcctttttcaaagctccgtcaggtataatctcttctattgaatctttgtt 17577070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 210 - 507
Target Start/End: Complemental strand, 13938802 - 13938505
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||| ||||| || ||||| ||||||||| |||| |||||| ||||||| || ||||||||||||||||| ||||| || || ||||| ||  |||||||    
T  13938802 ttggtgtcaatatcaatgcttcttggttggctgaagcggctcctgtgttaggttgcaaagtgggtaaagtaccgttcctctatttgggtctttcgattgg 13938703  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
     ||  ||||  |||||||||| |||||||||||  ||||||| || || ||  |||||||||||||| | |||||| ||| |||||| |||| ||| ||     
T  13938702 gggcgatccacgccggttattgttttgggagccagttgttaaacgaattaaagctagattgtctggtcggcatagtcggttcctttcttttggtggccga 13938603  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||||||||||||| ||||||  |||||| ||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  13938602 ttgatccttctcaaatctgtcctgactgcacttcctatctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 13938505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 210 - 507
Target Start/End: Original strand, 18681630 - 18681927
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||| || ||||| |||||||||||||| |||||||||||||| || || ||||||||||||||  ||||||| ||  ||||  | ||||||||    
T  18681630 ttggggtcaatatcaatgcttcttggttgtctgaagcggcttctgtgttaggttgtaaagtgggtaaagtatcgtttctctatatgggtattccgattgg 18681729  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
     ||| |||||  |||| | ||||||||||| ||||| | ||||||||| ||  |||||||| ||||||| |||||| ||| |||||  |||| ||||||     
T  18681730 gggtgatccgcaccgggtgttattttgggatcctatcgataatcgtattaaagctagattgactggttggcatagtcggttcctttattttggtggtcgt 18681829  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| || |||||||||||| |||||   ||||||||||| || |||||||||||||||||||| || |||||||||||| | ||||||||||||||    
T  18681830 ttgatcctgctcaaatctgtcctgactagacttcctgtctacgctctttcctttttcaaagctccatcgggtataatctctcccattgaatctttgtt 18681927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 15956041 - 15956329
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    |||||||| ||||||||||||||||||||| | ||| ||||||||||||| |||||| ||||||||||  |||| || || ||||||||       || |    
T  15956041 ggggtcaatattaatgcctcttggttgtcttaagcgacttctgtgttgggttgcaaactgggtaaagtgtcgttcctctatttgggcct-------gggg 15956133  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||| ||||||||||||||||||| ||| |||||||||| || ||  ||| |||||||||||| |||||| ||| |||||| |||| |||||||||    
T  15956134 gtgatccgcgccggttattattttgggaacctgttgttaatcgaattaaaactatattgtctggttggcatagtcggttcctttcttttggtggtcgctt 15956233  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     || |||||  | |  ||| | |||| ||||||||| |||| |||||||||||||||||||| || ||||||||||||| | ||||||||||||||    
T  15956234 aatccttctatagttcgtcctaactgcgcttcctgtttatgtactttcctttttcaaagctcagttaggtataatctcttccattgaatctttgtt 15956329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 2554686 - 2554392
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || ||||||||||||||||| |||||||| |||||| |   |||||| || ||||| ||| ||||| | |    
T  2554686 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttgggttgcaaagtaggtaaaatcttgtttctctatttggggctctcgattaggg 2554587  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||| | ||  | || |||||||| ||| |||| |||||||| || |||||||||||||||||||| ||| ||| |||||| || | |||||| ||    
T  2554586 gtgatccgcgtcgact-ttgttttgggaacctgttgtgaatcgtattaaatctagattgtctggttgacaaagtcggttcctttctttcggtggtcgttt 2554488  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| || || || |  ||| ||||||  || ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  2554487 gattctactaaagttcgtcctgactgctctacctgtctatgcactttcctttttcaaagctccgtcgggtataatctcttccattgaatctttgtt 2554392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 24766482 - 24766767
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || ||||| || || ||||||||| ||||||| |||||||| |||||| | |||||||| || ||||| |||  |||||| |    
T  24766482 ggggttaatattaatgattcgtggttttcagaagcggcttctatgttgggttgcaaagtaggtaaaatcccgtttctctatttggggctcttgattgggg 24766581  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||| |  | ||||| |||||||| ||| ||||||||||||| ||  |||||||||||||||| || ||| ||| |||||| || |              
T  24766582 gtgatccgcgttgattattgttttgggaacctgttgttaatcgtattaaaactagattgtctggttggcaaagtcggttcctttctttcg---------- 24766671  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || || ||| ||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  24766672 gattcttctaaagtccgtcctgactgctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattaaatctttgtt 24766767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 335 - 507
Target Start/End: Complemental strand, 26206292 - 26206120
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| |||||||| || |||||| |||| |||||  ||||| |||  || || |||| |||||||||| | ||||||||||||||| |||    
T  26206292 tgggaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctga 26206193  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |     | |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||    
T  26206192 cctctttgcctgtctatgcactttccttcttcaaagctccatcaggtataatctcctctattgaatctttgtt 26206120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 335 - 504
Target Start/End: Complemental strand, 15674791 - 15674622
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| |||||||| || |||||| |||| |||||  ||||  |||  || || |||| |||||||| | | || ||||||||||||||||    
T  15674791 tgggaacctattgtgaatcgtattaaatctagactgtcgggttggaatagacggtttctctcttttggtggtcgctgggttctactcaaatctgtcttga 15674692  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |    || |||||||||||||||||||| |||||||||||  |||||||||||||  |||||||||||||    
T  15674691 cctctctgcctgtctatgcactttccttcttcaaagctccagcaggtataatctcctctattgaatcttt 15674622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 439 - 502
Target Start/End: Complemental strand, 25351078 - 25351015
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||  |||||||||    
T  25351078 gcttcctgtctatgctctttccttcttcaaagctccgtcaggtataatctctatcattgaatct 25351015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 335 - 504
Target Start/End: Complemental strand, 33640876 - 33640707
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| ||| |||| |||||||||||||||||| |||| |||||  ||||| | | ||| || |||| ||| || ||| | |||||||||||||| ||||    
T  33640876 tgggaccctgttgtgaatcgtataaagtctagactgtcaggttggaatagtcgtttcctctcttttggtggccgtttggttcttctcaaatctgtgttga 33640777  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |    || ||||||||||| ||||| || |||||||||| ||| |||||||| |||||  ||||||||||    
T  33640776 cctctctgcctgtctatgctctttctttcttcaaagctctgtcgggtataatttctacccttgaatcttt 33640707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 19350799 - 19350731
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||   ||||||||||||||    
T  19350799 gcttcctgtctatgtactttccttcttcaaagctccgtcaggtataatttctctcattgaatctttgtt 19350731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 355 - 490
Target Start/End: Original strand, 14843338 - 14843473
Alignment:
Q  355 tataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgca 454  Q
    ||||||||||||||| || || || || ||||| || || || ||||  ||||| ||||| ||||||||  ||||||||||     | |||||||||||     
T  14843338 tataaagtctagattatcggggtggcaaagtagctatctctcttttgggggtcggttgattcttctcaagactgtcttgacctcattgcctgtctatgcc 14843437  T
Q  455 ctttcctttttcaaagctccgtcaggtataatctct 490  Q
    |||||||| |||||||||||||||||||||||||||    
T  14843438 ctttccttcttcaaagctccgtcaggtataatctct 14843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 502821 - 502882
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||||  ||||||||||    
T  502821 cctgtctatgctctttctttcttcaaagctccgtcaggtataatctctacccttgaatcttt 502882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 488
Target Start/End: Original strand, 13563219 - 13563264
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatct 488  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  13563219 cctgtctatgctctttcctttttcaaagctccgtcaggtataatct 13563264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 14686297 - 14686361
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||  ||||||||| ||||    
T  14686297 cctgtctatgctctttccttcttcaaggctccgtcaggtataatctctatcattgaatctatgtt 14686361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 649362 - 649423
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||| | ||||| |||||    
T  649362 cctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccattgattcttt 649423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 490
Target Start/End: Original strand, 12673296 - 12673455
Alignment:
Q  331 attttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtc 430  Q
    |||| |||||||| ||||||| |||||||| |||||| || ||||||| || |||  ||   ||||||| | |||||||||||| ||||| |  | ||||    
T  12673296 atttggggagcctgttgttaaccgtataaaatctagactggctggttggcaaagtcagtttttttccttcggtggtcgcttgatccttctaatgtatgtc 12673395  T
Q  431 ttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
     ||||||  || ||||||||||| |||||||| ||||| | ||| ||  |||||||||||    
T  12673396 ctgactgctctgcctgtctatgctctttccttcttcaacgatccatctagtataatctct 12673455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 456 - 507
Target Start/End: Original strand, 14372293 - 14372344
Alignment:
Q  456 tttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||||| |||||||||||||| | ||||||||| ||||    
T  14372293 tttcctttttcaaagctccgccaggtataatctcttccattgaatctctgtt 14372344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 439 - 502
Target Start/End: Complemental strand, 26514580 - 26514517
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||||||| ||||| || |||||||||| |||||||||| ||||||  |||||||||    
T  26514580 gcttcctgtctatgctctttctttcttcaaagctctgtcaggtatactctctatcattgaatct 26514517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 11060151 - 11060212
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||||||||| | ||||| |||||    
T  11060151 cctgtctatgcgctttccttcttcaaagttccatcaggtataatctcttccattgattcttt 11060212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 1104237 - 1104297
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||| |||||||| ||||||||||| | ||||| |||||||  ||||||||||||    
T  1104237 ctgtctatgctctttccttcttcaaagctccattaggtacaatctcttatattgaatcttt 1104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 455 - 507
Target Start/End: Complemental strand, 11469412 - 11469360
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||| ||||||||||| |||||| |||||||| | ||||||||||||||    
T  11469412 ctttccttcttcaaagctccatcaggtttaatctcttccattgaatctttgtt 11469360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 13086394 - 13086330
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||| |||||||| || |||||||| |||||||||||||||   ||||||||||||||    
T  13086394 cctgtttatgctctttccttctttaaagctccatcaggtataatctctttcattgaatctttgtt 13086330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 17078357 - 17078417
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||| ||||| |||||||| ||||||||||| ||||||||||||||| | ||||| |||||    
T  17078357 ctgtttatgcgctttccttcttcaaagctccatcaggtataatctcttccattgattcttt 17078417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 12687041 - 12687100
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||| ||||||||||||||| |||| ||||||||  ||||  |||||||||||    
T  12687041 cctgtctatgctctttcctttttcaaaactccatcaggtattgtctcctctattgaatct 12687100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 21549696 - 21549637
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||| ||||| || |||||||||||  |||||||||||||| | |||||||||||    
T  21549696 tgtctatgctctttctttcttcaaagctccaacaggtataatctcttccattgaatcttt 21549637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Original strand, 5390799 - 5390848
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||||| |||||||| || |||||| |||| |||||    
T  5390799 ctttcctttttcaaagctccctcaggtatcatttctactcttgattcttt 5390848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 500
Target Start/End: Original strand, 27104141 - 27104198
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaat 500  Q
    ||||||||||| |||||||||||||| ||||| ||||||||  ||||  |||||||||    
T  27104141 cctgtctatgctctttcctttttcaaggctccatcaggtattgtctcctctattgaat 27104198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 500
Target Start/End: Original strand, 27145955 - 27146012
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaat 500  Q
    ||||||||||| |||||||||||||| ||||| ||||||||  ||||  |||||||||    
T  27145955 cctgtctatgctctttcctttttcaaggctccatcaggtattgtctcctctattgaat 27146012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 504
Target Start/End: Complemental strand, 32186570 - 32186473
Alignment:
Q  407 cgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||| ||||| || |||||| ||||   ||||||||||||  | ||||| || |||||||||||| ||| |||||||||| | |||||| ||||    
T  32186570 cgcttgattcttcttaagtctgtcctgacctcgcttcctgtctacactctttctttcttcaaagctccgacagatataatctcttccattgaaacttt 32186473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 484
Target Start/End: Complemental strand, 32198053 - 32198012
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtata 484  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||    
T  32198053 cctgtttatgctctttcttttttcaaagctccgtcaggtata 32198012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 456 - 504
Target Start/End: Original strand, 28575763 - 28575811
Alignment:
Q  456 tttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||| ||||||||| | ||||||||||| ||| |||||||||||||    
T  28575763 tttccttcttcaaagcttcatcaggtataatatcttctattgaatcttt 28575811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 492
Target Start/End: Complemental strand, 29056372 - 29056321
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctac 492  Q
    |||||||||||||| |||||| |||||| || ||| |||||||||||||||||    
T  29056372 cttcctgtctatgccctttcc-ttttcagaggtccatcaggtataatctctac 29056321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 243; Significance: 1e-134; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 210 - 507
Target Start/End: Complemental strand, 20825384 - 20825086
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20825384 ttggggtcaacattaatgtctcgtggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccatttctatacttgggcctcccgattgg 20825285  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  20825284 aggtaatccgagccggttattattttgggagcctattgttaaacgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgc 20825185  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcct-ttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| || ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20825184 ttgattctgctcaaatatgtcttgactgcgcttcctgtctatgcactttccttttttcaaagctccgtcaggtataatctcttctattgaatctttgtt 20825086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 312 - 507
Target Start/End: Complemental strand, 17700462 - 17700267
Alignment:
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| |||||| ||    
T  17700462 gtaatccaagccggttattattttgggagcctattgttaatcgtataaagtctagattgtttggttggcatagtaggtaccattcctttggtggtcgatt 17700363  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  17700362 gatacttctcaaatctgtcttgactgcgcttcctgtctatgcactttcctttttcaaagctccgtcagatataatctcttctattgaatctttgtt 17700267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 13878545 - 13878840
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || ||||||||||||||||||||||| || ||||| |||||||| ||||||||||| ||| ||||||| || || |||||||| |||||||| |    
T  13878545 ggggtgaatattaatgcctcttggttgtctgaagcagcttcggtgttgggttgcaaagtgggaaaaattccgttcctctatttgggccttccgattgggg 13878644  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||| ||||||||||||||||||||||| ||||||||||||| ||  || ||||||||||||| |||||| ||| |||||| |||| ||||||  |    
T  13878645 gtgatccgcgccggttattattttgggagcctgttgttaatcgtattaaaactcgattgtctggttggcatagtcggttcctttcttttggtggtcgtct 13878744  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     || ||||||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  13878745 aattcttctcaaattcgtcctgactgcacttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 13878840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 32267636 - 32267341
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  32267636 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggg 32267537  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||  | ||  | || |||||||| ||| |||| || ||||| || ||||||||||||||||| || ||| ||| |||||| || | |||||| ||    
T  32267536 gtgatccacgtcgacttttgttttgggaacctgttgtgaaccgtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgttt 32267437  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||  || || ||| ||||||  || ||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||    
T  32267436 gattcttcaaaagtccgtcatgactgctctacctgtctatgcactttcctttttcaaagctttgtcaggtataatctcttccattgaatctttgtt 32267341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 245 - 507
Target Start/End: Complemental strand, 9923650 - 9923388
Alignment:
Q  245 gcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattattttgggagccta 344  Q
    |||||||| |||||||| |||||||| |||||| | | |||||| |||||||| ||| ||||||| ||  ||||| | || ||||| |||||||| |||     
T  9923650 gcggcttccgtgttgggttgcaaagtaggtaaaatccagtttctctacttggggctctcgattgggggcgatccgcgtcgattattgttttgggaacctg 9923551  T
Q  345 ttgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcc 444  Q
    |||||||||| || ||   ||||||||||||||| || ||| | | |||||| |||| |||||| ||| | ||||| || || ||||||||||  || ||    
T  9923550 ttgttaatcgcattaaaaatagattgtctggttggcaaagtcgattcctttcttttggtggtcgtttggttcttcttaagtccgtcttgactgctctacc 9923451  T
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  9923450 tgtctatacactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 9923388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 8300885 - 8300590
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    |||||||| |||||||  || |||||||| || ||||| |||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  8300885 ggggtcaatattaatgattcgtggttgtcagaagcggcatctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattggcg 8300786  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||  | ||  | || ||||||||  || |||| || ||||| || ||||||||| ||||||| || ||| |||  |||||||| | ||| || ||    
T  8300785 gcgatcctcgtcgacttttgttttgggaagctgttgtgaaccgtattaaatctagattggctggttggcaaagtcggtttctttccttcggtggccgttt 8300686  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || || ||| ||||||  || ||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  8300685 gattcttctaaagtccgtcctgactgctctacctgtctatgcactttcctttttcaaagctccggcaggtataatctcttccattgaatctttgtt 8300590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 212 - 490
Target Start/End: Complemental strand, 10530742 - 10530464
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    |||||||| ||||||||||||||||||||||| || |||||||||||||| | |||| ||||||||||  |||| || || |||||||| | |||||  |    
T  10530742 ggggtcaatattaatgcctcttggttgtctgaagcagcttctgtgttgggttacaaattgggtaaagtatcgttcctctatttgggccttctgattgacg 10530643  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
     | ||||  |||| |||||||||||| | ||| |||||||||| || || ||||||||||||| ||| |||||| ||| | |||| |||| ||  ||| |    
T  10530642 atgatcctcgccgattattattttggaaacctgttgttaatcgaattaaatctagattgtctgcttggcatagtcggttcatttcttttggtgaccgcct 10530543  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
     || ||||| || || ||| | ||||  ||| |||| |||||||||||||||||||||||||| |||||||||||||||    
T  10530542 aatccttctaaagtccgtcctaactgctctttctgtttatgcactttcctttttcaaagctccttcaggtataatctct 10530464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 41664426 - 41664721
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || ||||||||| ||||||| |||||||| |||||| | | |||||| || ||||| ||| ||||||| |    
T  41664426 ggggttaatattaatgattcgtggttgtcagaagcggcttctatgttgggttgcaaagtaggtaaaatcctgtttctctatttggggctctcgattgggg 41664525  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||| | ||  | || |||||||| ||| |||| |||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||| ||    
T  41664526 gtgatccgcgtcgtcttttgttttgggaacctgttgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgttt 41664625  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| || || || || ||| ||||||  |  |||||||| ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  41664626 gattctactaaagtccgtcctgactgctccacctgtctacgcactttcctttttcaaagctccgtcaggtataatctattccattgaatctttgtt 41664721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 7925468 - 7925173
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || ||||||||||||||||| |||||||| |||||| |  ||||||| || ||||| ||| ||||||| |    
T  7925468 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttgggctgcaaagtaggtaaaatctcgtttctctatttggggctctcgattgggg 7925369  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | ||  | || |||||||| ||| | ||  ||||||| || |||||||||||||||||    ||| ||| ||| || || | |||||| ||    
T  7925368 gcgatccgcgtcgtcttttgttttgggaacctgtggtggatcgtattaaatctagattgtctggttggncaagtcggttcctatctttcggtggtcgttt 7925269  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || |||||| ||||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  7925268 gattcttctaaagtctgtcctgactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 7925173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 364 - 507
Target Start/End: Original strand, 42176767 - 42176910
Alignment:
Q  364 tagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttccttt 463  Q
    ||||||||||||| |  ||||| ||| ||||||||||  ||||||  |||| || |||||||  |||||||| | |||||||||||||||||||||||||    
T  42176767 tagattgtctggtaggtatagtcggttcctttcctttagtggtcgtctgattctactcaaattcgtcttgacagcgcttcctgtctatgcactttccttt 42176866  T
Q  464 ttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||   |||||||||||| || | ||| ||||||||||    
T  42176867 ttcaaagctttttcaggtataatcccttccattaaatctttgtt 42176910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 504
Target Start/End: Original strand, 4987246 - 4987415
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| ||| |||| |||||| |||| |||||| |||| |||||  ||||| | | |||||| |||| ||| || ||| | |||||||||||||| ||||    
T  4987246 tgggaccctgttgtgaatcgtgtaaaatctagactgtcaggttggaatagtcgtttcctttcttttggtggccgtttggttcttctcaaatctgtgttga 4987345  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |    || ||||||||||| ||||| || ||||||||||||||||||||||| |||||  ||||||||||    
T  4987346 cctctctacctgtctatgctctttctttcttcaaagctccgtcaggtataatttctacccttgaatcttt 4987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 507
Target Start/End: Original strand, 16375284 - 16375456
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| || ||||| || |||||| |||  |||||  ||||| |||  || || |||| |||||||||| | || ||||||||||||||||    
T  16375284 tgggaacctattgtgaaccgtattaaatctagactgttaggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttga 16375383  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |    || ||||||||| |||||||||| |||||| ||||  |||||||||||||  ||||||||||||||||    
T  16375384 cctctctgcctgtctatacactttccttcttcaaacctccaacaggtataatctcctctattgaatctttgtt 16375456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 29721200 - 29721264
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  29721200 cctgtctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatctatgtt 29721264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 36158005 - 36157941
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||| | ||||||||||||||    
T  36158005 cctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccattgaatctttgtt 36157941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 422 - 504
Target Start/End: Complemental strand, 7453224 - 7453142
Alignment:
Q  422 aaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||   || ||||||||||||||||| || ||||||||||| ||||||||||||||| |  ||||||||||    
T  7453224 aaatctgtcttgacttctctacctgtctatgcactttctttcttcaaagctccatcaggtataatctcttcccttgaatcttt 7453142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 24794571 - 24794507
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||| || |||||||| ||||||||||||||| | ||||||||||||||    
T  24794571 cctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatctttgtt 24794507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 502
Target Start/End: Complemental strand, 25193943 - 25193880
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||| |||||||||| |||||||| |||||||||| |||||||||||||||||  |||||||||    
T  25193943 gcttactgtctatgctctttccttcttcaaagctctgtcaggtataatctctatcattgaatct 25193880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 23942938 - 23942877
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| |||||||| ||||||||||| ||| ||||||||||| | |||||||||||    
T  23942938 cctgtctatgctctttccttcttcaaagctccatcatgtataatctcttccattgaatcttt 23942877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 11393620 - 11393684
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| ||||| || || |||||||| ||||||||||||||| | ||||||||||||||    
T  11393620 cctgtctatgctctttcattctttaaagctccatcaggtataatctcttccattgaatctttgtt 11393684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Complemental strand, 6245933 - 6245891
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatc 487  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  6245933 tgtctatgctctttccttcttcaaagctccgtcaggtataatc 6245891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 503
Target Start/End: Complemental strand, 6901786 - 6901728
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctt 503  Q
    ||||||||| |||||||| ||||||||||| | ||||||||||||| | ||||||||||    
T  6901786 tgtctatgccctttccttcttcaaagctccattaggtataatctcttccattgaatctt 6901728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 500
Target Start/End: Original strand, 26774491 - 26774593
Alignment:
Q  398 tttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattg 497  Q
    ||||||||||| ||||| ||  | || |||||| |||||  | | ||| ||||||| || ||||| ||||||||||||||| ||||||||||| ||||||    
T  26774491 tttgttggtcgtttgattctcattaagtctgtcctgacttcgttacctatctatgctctctccttcttcaaagctccgtcatgtataatctcttctattg 26774590  T
Q  498 aat 500  Q
    |||    
T  26774591 aat 26774593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 500
Target Start/End: Complemental strand, 12341418 - 12341361
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaat 500  Q
    |||||||| || ||||||||||||||||||| ||| |||||||||||| | |||||||    
T  12341418 cctgtctacgctctttcctttttcaaagctctgtcgggtataatctcttccattgaat 12341361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 461 - 502
Target Start/End: Original strand, 37165428 - 37165469
Alignment:
Q  461 tttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  37165428 tttttcaaagctccgtcaggtataatctcttccattgaatct 37165469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 14345099 - 14345151
Alignment:
Q  333 tttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagt 385  Q
    ||||||| |||||||||||||| || || ||||||||||||||||| ||||||    
T  14345099 tttgggatcctattgttaatcgcattaaatctagattgtctggttgtcatagt 14345151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 496
Target Start/End: Complemental strand, 18187995 - 18187943
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactatt 496  Q
    |||||||||| |||||| | ||||||||||||||||||| ||||||| |||||    
T  18187995 ctgtctatgctctttccatcttcaaagctccgtcaggtacaatctcttctatt 18187943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 502
Target Start/End: Original strand, 28453714 - 28453818
Alignment:
Q  398 tttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattg 497  Q
    |||| |||||||||||| || || |||||||| ||| |    || |||||||| || ||||| |||||||||||||| ||||||||||||||  || |||    
T  28453714 tttgatggtcgcttgattctccttaaatctgttttgtcatctctgcctgtctacgccctttcttttttcaaagctccctcaggtataatctcatctcttg 28453813  T
Q  498 aatct 502  Q
    |||||    
T  28453814 aatct 28453818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 440 - 504
Target Start/End: Original strand, 43612471 - 43612535
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||| ||||||||| ||||| || || |||||||| ||||||||||||||| | |||||||||||    
T  43612471 cttcatgtctatgccctttcattcttgaaagctccatcaggtataatctcttccattgaatcttt 43612535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 12135072 - 12135013
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||| || |||||| | || |||||||||||| | |||||||||||    
T  12135072 tgtctatgcactttccttctttaaagcttcatcgggtataatctcttccattgaatcttt 12135013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 15539908 - 15539849
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || ||||  |||||||||    
T  15539908 cctgtttatgctctttccttcttcaaagctccgtcaggtatcatttctatcattgaatct 15539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 490
Target Start/End: Complemental strand, 36025360 - 36025325
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctct 490  Q
    |||||||| |||||||||||||||||||||||||||    
T  36025360 ctttccttcttcaaagctccgtcaggtataatctct 36025325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 36493232 - 36493189
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||    
T  36493232 cctgtctatgctctttccttcttcaaggctccgtcaggtataat 36493189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 502
Target Start/End: Original strand, 42451941 - 42451988
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||||||||||||  |||||||||| ||| |||||||||||    
T  42451941 ctttcctttttcaaagctcctgcaggtataatttcttctattgaatct 42451988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 45255130 - 45255176
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    |||||||||| ||||| || ||||||||||| |||||||||||||||    
T  45255130 ctgtctatgcgctttcattcttcaaagctccatcaggtataatctct 45255176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Original strand, 10800962 - 10801011
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||||| |||||||| || |||||| |||| |||||    
T  10800962 ctttcctttttcaaagctccctcaggtatcatttctactcttgactcttt 10801011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 17659692 - 17659631
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| |||||||| || |||||||| ||| ||||||||||| | ||||| |||||    
T  17659692 cctgtctatgcgctttccttcttaaaagctccatcaagtataatctcttccattgattcttt 17659631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 28992510 - 28992555
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||| |||||||| |||||||  ||||||||||||||||||    
T  28992510 tgtctatgctctttccttcttcaaagtcccgtcaggtataatctct 28992555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 238; Significance: 1e-131; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 210 - 507
Target Start/End: Original strand, 25856495 - 25856792
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25856495 ttggggtcaacattaatgtctcgtggttgtctgaggcggcctctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 25856594  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  25856595 aggtaatccgagccggttattattttgggagcctattgttaaacgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgc 25856694  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| || |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  25856695 ttgattctgctcaaatctgtcttaactgcgattcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttatattaaatctttgtt 25856792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 210 - 480
Target Start/End: Original strand, 33385029 - 33385299
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| || || ||    
T  33385029 ttggggtcaatattaatgtctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttctgtttctctacttgggccttccaatagg 33385128  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  33385129 aggtaatccgagccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttggcatagtaggtacctttcctttggtggtcgc 33385228  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcagg 480  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33385229 ttgatacttctcaaatctgtcttgactgcgcttcctgtctatgcactttcctttttcaaagctccgtcagg 33385299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 291 - 507
Target Start/End: Original strand, 8299320 - 8299535
Alignment:
Q  291 acttgggcctcccgattggaggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggta 390  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  8299320 acttgggcctcccgattggaggtaatccgagccggttattattttggaagcctattgttaaacgtataaagtctagattgtctggttggcatagtaggta 8299419  T
Q  391 cctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||| |||||||||||| || ||||||| |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8299420 cctttcctttggtggtcgcttgat-ctgctcaaatttgtcttaactgcgattcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 8299518  T
Q  491 actattgaatctttgtt 507  Q
     ||||||||||||||||    
T  8299519 tctattgaatctttgtt 8299535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 223 - 507
Target Start/End: Complemental strand, 27796554 - 27796271
Alignment:
Q  223 taatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggc 322  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||||| ||| || |||| || || |||||||| |||||||| ||| ||||| ||    
T  27796554 taatgcctcttggttgtctgaagcagcttctgtgttgggttgcaaagtgggaaaaatttcgttcctctatttgggccttccgattgg-ggtgatccgcgc 27796456  T
Q  323 cggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctca 422  Q
    ||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||| |||||| ||| |||||| |||| ||||||  | || |||||||    
T  27796455 cggttattattttgggagcctgttgttaatcgtattaaaactagattgtctggttggcatagtcggttcctttcttttggtggtcgtctaattcttctca 27796356  T
Q  423 aatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  27796355 aattcgtcctgactgcacttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 27796271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 224 - 507
Target Start/End: Complemental strand, 33170728 - 33170445
Alignment:
Q  224 aatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggcc 323  Q
    ||||| ||||||||| |||  |||||||||||||| || ||||||||||||||||| || || || || ||||| || |||||||| ||  ||||| |||    
T  33170728 aatgcttcttggttggctggagcggcttctgtgttaggttgcaaagtgggtaaagtaccattcctctatttgggtcttccgattgggggcgatccgcgcc 33170629  T
Q  324 ggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaa 423  Q
    ||||||| ||||||||||| |||||||| || || ||  |||||||||||||||| |||||| ||| |||||| |||| ||  || ||||| ||||||||    
T  33170628 ggttattgttttgggagccaattgttaaacgaattaaagctagattgtctggttggcatagtcggttcctttcttttggtgaccggttgatccttctcaa 33170529  T
Q  424 atctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    || |||| ||||||  || ||||||||||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  33170528 atttgtcctgactgcactacctgtctatgctctttcctttttcaaagctccgtcaggtataatctattccattgaatctttgtt 33170445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 233 - 507
Target Start/End: Original strand, 28534755 - 28535029
Alignment:
Q  233 tggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattat 332  Q
    |||||||| || |||||||| |||||||| |||||||| |||||| | |||||||| || ||||| ||| ||||||| ||  ||||| | || ||||| |    
T  28534755 tggttgtcagaagcggcttccgtgttgggttgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggggcgatccgcgtcgattattgt 28534854  T
Q  333 tttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtctt 432  Q
    ||||||| ||| ||||||||||||| ||   ||||||||| ||||| || ||| ||| |||||| |||| |||||| ||||| ||||| || || ||| |    
T  28534855 tttgggaacctgttgttaatcgtattaaaaatagattgtcaggttggcaaagtcggttcctttcttttggtggtcgtttgattcttcttaagtccgtcct 28534954  T
Q  433 gactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||  || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  28534955 gactgctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 28535029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 233 - 507
Target Start/End: Complemental strand, 42514781 - 42514507
Alignment:
Q  233 tggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattat 332  Q
    |||||||| || |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| ||  ||||| | ||  | || |    
T  42514781 tggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggggcgatccgcgtcgtcttttgt 42514682  T
Q  333 tttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtctt 432  Q
    ||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||| ||||| ||||| || |||||| |    
T  42514681 tttgggaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattcttctaaagtctgtcct 42514582  T
Q  433 gactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  42514581 gactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 42514507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 23239463 - 23239170
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| | |||| | |||||||| || ||||| ||| |||  || |    
T  23239463 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtagttaaaatcccgtttctctatttggggctctcga--gggg 23239366  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||  | ||  | || |||||||| ||| |||| |||||||  || ||||||||||||||||| || ||| ||| |||||| || | |||||| |     
T  23239365 gtgatccacgtcgacttttgttttgggaacctgttgtgaatcgtactaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgttc 23239266  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || || ||| ||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  23239265 gattcttctaaagtccgtcctgactgctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 23239170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 245 - 507
Target Start/End: Original strand, 30731405 - 30731667
Alignment:
Q  245 gcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattattttgggagccta 344  Q
    |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| ||  ||||| | ||  | || |||||||| |||     
T  30731405 gcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggggcgatccgcgtcgacttttgttttgggaacctg 30731504  T
Q  345 ttgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcc 444  Q
    | ||  ||||||| || |||||||||||||||||  | ||| ||| ||| || || | |||||| ||||| || || || || ||| ||||||  || ||    
T  30731505 tggtggatcgtattaaatctagattgtctggttggaaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctctacc 30731604  T
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  30731605 tgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 30731667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 354
Target Start/End: Original strand, 27165150 - 27165294
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    ||||| |||| || |||||||||||||||| | | ||||||| ||||||||| |||||||||||||||||  |||| || || |||||||||||||||||    
T  27165150 ttgggatcaatataaatgcctcttggttgtattaagcggcttatgtgttgggttgcaaagtgggtaaagtgtcgttcctctatttgggcctcccgattgg 27165249  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcg 354  Q
     ||  ||||| | ||||||||||||||||||| | ||||||||||    
T  27165250 gggcgatccgcgtcggttattattttgggagcatgttgttaatcg 27165294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 445 - 507
Target Start/End: Complemental strand, 10781050 - 10780988
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10781050 tgtctatgcactttcctttttcaaagctccgtcaggtataatctcttctattgaatctttgtt 10780988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 403 - 507
Target Start/End: Original strand, 35983040 - 35983144
Alignment:
Q  403 tggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||| ||||| ||||| || |||||| ||||||  || ||||||||||||||||||||||||||||||| |||||||||||||| | | |||||||||    
T  35983040 tggtcgtttgattcttcttaagtctgtcctgactgctctacctgtctatgcactttcctttttcaaagctctgtcaggtataatcttttccattgaatct 35983139  T
Q  503 ttgtt 507  Q
    |||||    
T  35983140 ttgtt 35983144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 504
Target Start/End: Original strand, 22094361 - 22094599
Alignment:
Q  266 aaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtcta 365  Q
    ||||||||||| ||||| ||  ||||||||||  | |||||||| ||||||||  | || || |  || ||||| ||| |||| |||||||| ||  |||    
T  22094361 aaagtgggtaaggttcctttcttatacttgggtatgccgattggtggtaatcctcgacgtttgtgtttctgggatcctgttgtgaatcgtattaaagcta 22094460  T
Q  366 gattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttccttttt 465  Q
    || |||| |||||  ||||| | | ||| || |||| ||| |  ||| | ||||||||| |||||||||||    | ||||||||||| |||||||| ||    
T  22094461 gactgtcgggttggaatagtcgtttcctctcttttggtggccatttggttcttctcaaagctgtcttgacttctttgcctgtctatgctctttccttctt 22094560  T
Q  466 caaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  22094561 caaagctccgtcaggtataatctctgccattgaatcttt 22094599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 398 - 507
Target Start/End: Original strand, 35121932 - 35122041
Alignment:
Q  398 tttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattg 497  Q
    |||| |||||||||||| || || ||||| || ||||||   || ||||||||||| |||||||| || |||||||| ||||||||||||||| | ||||    
T  35121932 tttggtggtcgcttgattctcctaaaatcagttttgacttctctgcctgtctatgctctttccttctttaaagctccttcaggtataatctcttccattg 35122031  T
Q  498 aatctttgtt 507  Q
    ||||||||||    
T  35122032 aatctttgtt 35122041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 474
Target Start/End: Complemental strand, 36256737 - 36256595
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||| ||| | ||||| |||||||| |||||| ||||| |||| || ||| |||  ||||| ||||  ||||||||||| ||| | || |||||||    
T  36256737 ttttgggaacctgtggttaaccgtataaaatctagactgtctagttggcaaagtcggtttctttcttttggaggtcgcttgattcttttaaagtctgtct 36256638  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaagctcc 474  Q
    |||| | ||| ||||||||||| |||||||| ||||| |||||    
T  36256637 tgaccgcgctacctgtctatgctctttccttcttcaaggctcc 36256595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 26261608 - 26261664
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaat 500  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||||| |||||||||    
T  26261608 ctgtctatgctctttccttcttcaaagctccttcaggtataatctcttctattgaat 26261664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 507
Target Start/End: Original strand, 30509201 - 30509376
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||| ||| | || |||||||| || ||||||||||| || ||  ||||  |||  || || |||| |||||||||||| ||||| ||| | || |    
T  30509201 ttttgggatcctgtcgtgaatcgtattaaatctagattgtcggggtggaatagccggtttctctcttttggtggtcgcttgatccttctgaaagccgtgt 30509300  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||   || ||||||||||| |||||||| || ||||||||  |||||||||||||| | ||||| ||||||||    
T  30509301 tgacttctctgcctgtctatgctctttccttctttaaagctccaacaggtataatctcttccattgattctttgtt 30509376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 507
Target Start/End: Original strand, 30549544 - 30549719
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||| ||| | || |||||||| || ||||||||||| || ||  ||||  |||  || || |||| |||||||||||| ||||| ||| | || |    
T  30549544 ttttgggatcctgtcgtgaatcgtattaaatctagattgtcggggtggaatagccggtttctctcttttggtggtcgcttgatccttctgaaagccgtgt 30549643  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||   || ||||||||||| |||||||| || ||||||||  |||||||||||||| | ||||| ||||||||    
T  30549644 tgacttctctgcctgtctatgctctttccttctttaaagctccaacaggtataatctcttccattgattctttgtt 30549719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 445 - 507
Target Start/End: Complemental strand, 19506847 - 19506785
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||| |||||||| || |||||||| ||||||||||||||| | ||||||||||||||    
T  19506847 tgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatctttgtt 19506785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 29572159 - 29572221
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttg 505  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| |  |||||||||||    
T  29572159 cctgtctatgcactttccttcttcaaagctctgtcaagtataatctcttcctttgaatctttg 29572221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 29573536 - 29573598
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttg 505  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| |  |||||||||||    
T  29573536 cctgtctatgcactttccttcttcaaagctctgtcaagtataatctcttcctttgaatctttg 29573598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 29574913 - 29574975
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttg 505  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| |  |||||||||||    
T  29574913 cctgtctatgcactttccttcttcaaagctctgtcaagtataatctcttcctttgaatctttg 29574975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 29576290 - 29576352
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttg 505  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| |  |||||||||||    
T  29576290 cctgtctatgcactttccttcttcaaagctctgtcaagtataatctcttcctttgaatctttg 29576352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 29577667 - 29577729
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttg 505  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| |  |||||||||||    
T  29577667 cctgtctatgcactttccttcttcaaagctctgtcaagtataatctcttcctttgaatctttg 29577729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 505
Target Start/End: Original strand, 29579044 - 29579106
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttg 505  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| |  |||||||||||    
T  29579044 cctgtctatgcactttccttcttcaaagctctgtcaagtataatctcttcctttgaatctttg 29579106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 488
Target Start/End: Complemental strand, 42260166 - 42260088
Alignment:
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatct 488  Q
    ||||| |||||||| |||||||||||   |||||||||||| || |||||||| ||||||||||| |||| ||||||||    
T  42260166 ttgattcttctcaagtctgtcttgacctcgcttcctgtctacgctctttccttcttcaaagctccatcagatataatct 42260088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 38358318 - 38358257
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| ||||| || |||||||||||  |||||||||||||| | |||||||||||    
T  38358318 cctgtctatgctctttctttcttcaaagctccaacaggtataatctcttccattgaatcttt 38358257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 34481795 - 34481735
Alignment:
Q  447 tctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||| ||||| ||||| ||||||||| | ||||||||||||||  ||||||||||||||||    
T  34481795 tctacgcactctccttcttcaaagcttcatcaggtataatctcctctattgaatctttgtt 34481735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 502
Target Start/End: Complemental strand, 588394 - 588299
Alignment:
Q  407 cgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||| ||||||| ||||||||||||||    || ||||||||||| ||||  || ||||||||||| | | ||||||||||| | |||||||||    
T  588394 cgcttggtacttctaaaatctgtcttgacctctctgcctgtctatgctctttgtttcttcaaagctccattatgtataatctcttccattgaatct 588299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 6050091 - 6050048
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||    
T  6050091 cctgtctatgcgctttccttcttcaaagctccatcaggtataat 6050048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 495
Target Start/End: Complemental strand, 6885759 - 6885712
Alignment:
Q  448 ctatgcactttcctttttcaaagctccgtcaggtataatctctactat 495  Q
    |||||| |||||||| ||||||||||| ||||||||||||||| ||||    
T  6885759 ctatgctctttccttcttcaaagctccatcaggtataatctcttctat 6885712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 20208009 - 20208056
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||| |||||||| ||||||||||| ||| |||||||||||    
T  20208009 cctgtctatgcgctttccttcttcaaagctccatcatgtataatctct 20208056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 21084732 - 21084689
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||    
T  21084732 cctgtctatgctctttccttcttcaaggctccgtcaggtataat 21084689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 507
Target Start/End: Complemental strand, 22438067 - 22438005
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||  ||||||| |||| |||||| |||||||||||||||  |||||||||| ||||    
T  22438067 tgtctatgctttttccttcttcatagctccctcaggtataatctcttatattgaatctatgtt 22438005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Complemental strand, 29323732 - 29323683
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||||| |||||||| || |||||| |||| |||||    
T  29323732 ctttcctttttcaaagctccctcaggtatcatttctactcttgactcttt 29323683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 269 - 507
Target Start/End: Original strand, 12341370 - 12341608
Alignment:
Q  269 gtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagat 368  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12341370 gtgggtaaagttccgtttctatacttgggcctctcgattggaggtaatccgcgccggttattattttgggagcctattgttaatcatataaagtctagat 12341469  T
Q  369 tgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaa 468  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||    
T  12341470 tgtctggttggcatagtaggtacctttcctttggtggtcgcttgatacttctcaaatctgtcttgactgcgcttcctgtctatacactttccttttttaa 12341569  T
Q  469 agctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  12341570 agctccgtcgggtataatctcttctattgaatctttgtt 12341608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 210 - 507
Target Start/End: Complemental strand, 19891761 - 19891464
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||    
T  19891761 ttggggtcaatattaatgcctcttggttgtctgaagcggcttctgtgttgggttgcaaagtgggtaaagttccgtttctctatttgggccttccgattgg 19891662  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
     ||  ||||  || |||||||||||||||||||||||||||||||||| || ||||||||||||||||  |||||| ||| ||||||||||  ||||| |    
T  19891661 gggcgatccacgctggttattattttgggagcctattgttaatcgtattaaatctagattgtctggttagcatagtcggttcctttcctttagtggtcac 19891562  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     |||| || ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  19891561 ctgattctactcaaatctgtcttgactgcgcttcctgtttatgaactttcctttttcaaagctccgtcaggtataatatcttccattgaatctttgtt 19891464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 48569081 - 48569376
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| || |||| || || |||||||| |||||||  |    
T  48569081 ggggtgaatattaatgcctcttggttgtctgaagcggcttctgtgttggattgcaaagtgggtaaaatttcgttcctctatttgggccttccgattgagg 48569180  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| ||| |||||| |||| |||||| ||    
T  48569181 gtgatccgcgccgattattattttgggagcctgttgttaatcgtataaaatctagattgtctggttggcatagtcggttcctttcttttggtggtcgttt 48569280  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||    
T  48569281 gattcttctcaaatccgtcctgactgcacttcctgtctatgcactttcctttttcaaagctccatcaggtataatctcttccattgaatctttgtt 48569376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 210 - 507
Target Start/End: Complemental strand, 16180024 - 16179727
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||  ||||||| || ||||| || ||||||||    
T  16180024 ttggtgtcaatattaatgcctcttggttgtctgaagcggcttctgtgttgggttgcaaagtgggtaaagtgtcgtttctctatttgggtcttccgattgg 16179925  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||  ||||| | ||||||||| ||||||||||| |||||||||| || || |||||||||||| |||| ||||||  || ||||||||||| |||| |     
T  16179924 aggcgatccgcgacggttattaatttgggagcctgttgttaatcgaattaaatctagattgtctagttggcatagtcagttcctttcctttggtggtagg 16179825  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||  ||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  16179824 ttgacccttctcaaatctgtcctgattgcacttcctgtctatgcactttcctttttcaaagctctgtcaggtataatctcttccattgaatctttgtt 16179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 17077355 - 17077650
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||  |||| || || ||||| ||  |||||||||    
T  17077355 ggggtcaatattaatgcctcttggttgtctgaagcggcttctgtgttgggttgcaaagtgggtaaagtgtcgttcctctatttgggtctttcgattggag 17077454  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    | |||  | ||||||||||||||||| ||||| |||||||||| || ||  |||||||||||||||| |||||| ||| |||||| |||  |||||| ||    
T  17077455 gcaatttgcgccggttattattttggaagcctgttgttaatcgaattaaaactagattgtctggttggcatagtcggttcctttcttttagtggtcgttt 17077554  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| |||||||||| |||| | | ||  |||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  17077555 gatccttctcaaatttgtcctaattgcacttcatgtctatgcactttcctttttcaaagctctgtcaggtataatctcttccattgaatctttgtt 17077650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 210 - 507
Target Start/End: Original strand, 962219 - 962516
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||| ||||| || ||||| ||||||||| |||| |||||||||||||| || ||||||||||||||||| ||||| || || ||||| || | ||||||    
T  962219 ttggtgtcaatatcaatgcttcttggttggctgaagcggcttctgtgttaggttgcaaagtgggtaaagtaccgttcctctatttgggtcttcagattgg 962318  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
     ||  ||||| |||||||||| |||| ||||||  ||||||| || || ||  |||||||||||||||| |||||| ||| |||||| |||| ||| ||     
T  962319 gggcgatccgcgccggttattgttttaggagccagttgttaaacgaattaaagctagattgtctggttggcatagtcggttcctttcttttggtggccgg 962418  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||||||||||||| ||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  962419 ttgatccttctcaaatctgtcctgactgcacttcctgtctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 962516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 34331873 - 34332168
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || ||||||||||||||||| |||||||| |||||| | |||||||| || ||||| ||| |||||||      
T  34331873 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttgggttgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggt 34331972  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||| | ||  | || |||||||| ||| |||| |||||||| || ||||||||||||||||| || ||| ||| |||||| || | |||||| ||    
T  34331973 gtgatccgcgtcgacttttgttttgggaacctgttgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgttt 34332072  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| || || || |||||| ||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  34332073 gattctactaaagtctgtcctgactgctctacctgtctatgcactttccttttttaaagctccgtcaggtataatctcttccattgaatctttgtt 34332168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 2365360 - 2365065
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  2365360 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggg 2365261  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | |   | || |||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||| ||    
T  2365260 gcgatccgcgtcatcttttgttttgggaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgttt 2365161  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || |||||| ||||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  2365160 gattcttctaaagtctgtcctgactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 2365065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 19919287 - 19919582
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || ||| |||| || |||||||||||||||||||| ||||| |||||| | |||||||| ||  |||| ||||||||||| |    
T  19919287 ggggttaatattaatgagtcgtggctgtcagaagcggcttctgtgttggggtgtaaagtaggtaaaatcccgtttctctatatgggactcccgattgggg 19919386  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | ||  | || |||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| |||  || || || | |||||| ||    
T  19919387 gcgatccgcgtcgacttttgttttgggaacctgtggtagatcgtattaaatctagattgtctggttggcaaagtcggtttctatctttcggtggtcgttt 19919486  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| || || || |  ||| | ||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  19919487 gattctactaaagttcgtcctaactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 19919582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 507
Target Start/End: Original strand, 6175664 - 6175830
Alignment:
Q  341 cctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgc 440  Q
    |||||||| |||| ||| || |||||| |||| |||||  ||||| |||  || || |||| |||||||||| | || |||||||||||||||||    |    
T  6175664 cctattgtgaatcatattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttgacatctc 6175763  T
Q  441 ttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    | |||||||||||||||||||| |||||| ||||  |||||||||||||  ||||||||||||||||    
T  6175764 tgcctgtctatgcactttccttcttcaaaactccaacaggtataatctcctctattgaatctttgtt 6175830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 504
Target Start/End: Original strand, 24925863 - 24926035
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||| |||||||| ||||||||||| |||||| |||| |||||  |||   |||  || || ||||  ||||||||||| || || ||||| || |    
T  24925863 ttttgggatcctattgtgaatcgtataaaatctagactgtcgggttggaataaacggtttctctcttttggcggtcgcttgatcctccttaaatcggttt 24925962  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||   || ||||||||||||||||| || ||||||||||| ||||||||||||||| | |||||||||||    
T  24925963 tgacttctctgcctgtctatgcactttctttcttcaaagctccatcaggtataatctcttccattgaatcttt 24926035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 404 - 507
Target Start/End: Complemental strand, 19876133 - 19876030
Alignment:
Q  404 ggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctt 503  Q
    ||||||||| | ||||| || |||||| |||||  |||||||||||||||||||||||| |||||| |||||||||||||||| |||   ||||||||||    
T  19876133 ggtcgcttggttcttcttaagtctgtcctgacttcgcttcctgtctatgcactttccttcttcaaatctccgtcaggtataatttctctcattgaatctt 19876034  T
Q  504 tgtt 507  Q
    ||||    
T  19876033 tgtt 19876030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 36731747 - 36731680
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  36731747 cttcctatctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 36731680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 12334144 - 12334205
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtg 271  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||    
T  12334144 ttggggtcaacattagtgtctcttggttgtctaaggcggcttctgtgttggggtgcaaagtg 12334205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 425 - 502
Target Start/End: Complemental strand, 53942115 - 53942038
Alignment:
Q  425 tctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||||||   ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||  |||||||||    
T  53942115 tctgtcttgacctcgcttcttgtctatgctctttccttcttcaaagctccgtcaggtataatctctatcattgaatct 53942038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 52907331 - 52907395
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  52907331 cctgtttatgccctttccttcttcaaagctccatcaggtataatctcttctattgaatctatgtt 52907395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 490
Target Start/End: Complemental strand, 31675782 - 31675735
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  31675782 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 31675735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 40513013 - 40513072
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||  |||||||||    
T  40513013 cctgtctatgctctttccttcttcaaggctccgtcaggtataatctctatcattgaatct 40513072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 445 - 507
Target Start/End: Complemental strand, 55367458 - 55367396
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||| || |||||||||||||||||| ||||||||||||||||| | || |||||||||||    
T  55367458 tgtctacgctctttcctttttcaaagctgcgtcaggtataatctcttccatagaatctttgtt 55367396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 462
Target Start/End: Complemental strand, 25786072 - 25785842
Alignment:
Q  229 ctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggtta 328  Q
    ||||||| || |||||||||| |||||| || |||| |||||||| | ||| |  ||||| || | |||| ||| |||||| ||||||||| |  ||||     
T  25786072 ctcttggctgactgaggcggcatctgtgctgaggtgtaaagtgggaagagtgcgttttct-tattcgggcttcc-gattggtggtaatccgtgtaggtt- 25785976  T
Q  329 ttattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctg 428  Q
    || |||||| ||||| || |||| |||||||| |||||||||||||||| ||| ||| | |  || ||||| | |||||||||||| |||||| | | |     
T  25785975 ttgttttggaagcctgttattaaccgtataaaatctagattgtctggttaacaaagtcgatttctctccttcggtggtcgcttgatccttctctagtatc 25785876  T
Q  429 tcttgactgtgcttcctgtctatgcactttcctt 462  Q
    || ||||||  || ||||||||||| ||||||||    
T  25785875 tcctgactgctctgcctgtctatgctctttcctt 25785842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 14863745 - 14863809
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||| || |||||||| | ||||||||||||| | ||||||||||||||    
T  14863745 cctgtctatgctctttccttctttaaagctccattaggtataatctcttccattgaatctttgtt 14863809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 21739777 - 21739841
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||| || |||||||| |||| |||||||||| | ||||||||||||||    
T  21739777 cctgtctatgctctttccttctttaaagctccatcagttataatctcttccattgaatctttgtt 21739841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 23819416 - 23819352
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||| |||||||| ||||||||||| ||| ||||||||||| | ||||||||||||||    
T  23819416 cctgtatatgcgctttccttcttcaaagctccatcaagtataatctcttccattgaatctttgtt 23819352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 502
Target Start/End: Complemental strand, 14309454 - 14309371
Alignment:
Q  419 ctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||||||| ||||   ||||| ||||||||| |||||||| |||| ||||||||||||||| || |||  ||||||||||    
T  14309454 ctcaaatctgtcctgacctcgcttcttgtctatgctctttccttcttcatagctccgtcaggtatcatttctcttattgaatct 14309371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 504
Target Start/End: Original strand, 15481049 - 15481108
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||| ||||| || ||||||||||| ||||||||||||||| | |||||||||||    
T  15481049 tgtctatgctctttctttcttcaaagctccatcaggtataatctcttccattgaatcttt 15481108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 18381899 - 18381840
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||||||  ||||||||||||||||||| ||||||||||| ||| | |||||||||    
T  18381899 cctgtctatgctatttcctttttcaaagctccatcaggtataatatcttccattgaatct 18381840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 507
Target Start/End: Original strand, 43120964 - 43121027
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||  ||||||| ||||||||||| | ||||||||||||| | ||||||||||||||    
T  43120964 ctgtctatgcgttttccttcttcaaagctccattaggtataatctcttccattgaatctttgtt 43121027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 15313265 - 15313203
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgg 272  Q
    |||||||||| ||||||||||||||||||||||| |||| |||| | ||||| | ||||||||    
T  15313265 ttggggtcaatattaatgcctcttggttgtctgaagcggattctatattgggttacaaagtgg 15313203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 504
Target Start/End: Original strand, 30166591 - 30166673
Alignment:
Q  422 aaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||   || ||||||||||| ||||| || ||||||||||| ||||||||||| ||| |  ||||||||||    
T  30166591 aaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatcttt 30166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 34830270 - 34830184
Alignment:
Q  416 cttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||| || |||||| |||| ||| | ||||||||||| |||||||| |||   ||||||||||||||||||||| | |||||||||    
T  34830270 cttcttaagtctgtcctgaccgtgttacctgtctatgctctttccttcttcctggctccgtcaggtataatctctgccattgaatct 34830184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 447 - 504
Target Start/End: Original strand, 46907963 - 46908020
Alignment:
Q  447 tctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||| |||||||| ||||||||||| ||| ||||||||||| | |||||||||||    
T  46907963 tctatgctctttccttcttcaaagctccatcaagtataatctcttccattgaatcttt 46908020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 47538118 - 47538057
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| |||||||| |||||| |||| |||| |||||||||| ||||||| |||||    
T  47538118 cctgtctatgcgctttccttcttcaaaactccatcagatataatctcttctattgattcttt 47538057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 31920641 - 31920688
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||| |||||||| ||||||||| ||||| |||||||||||    
T  31920641 cctgtctatgccctttccttcttcaaagcttcgtcaagtataatctct 31920688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Original strand, 52250414 - 52250457
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||    
T  52250414 cctgtctatgcgctttccttcttcaaggctccgtcaggtataat 52250457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 502
Target Start/End: Original strand, 53504529 - 53504576
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||||||||||||  |||||||||| ||| |||||||||||    
T  53504529 ctttcctttttcaaagctcctacaggtataatttcttctattgaatct 53504576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 490
Target Start/End: Complemental strand, 8130863 - 8130777
Alignment:
Q  404 ggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||| ||||| || ||||||||||| | ||  || |||||||| |||||||| ||||| |||||  |||||| |||||||    
T  8130863 ggtcgcttgattcttctaaagtctgtcttgaccgcgcaaccggtctatgctctttccttcttcaaggctccagcaggtagaatctct 8130777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 486
Target Start/End: Complemental strand, 48930580 - 48930534
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    |||||||||||||| ||| |||| ||||| |||||||||||||||||    
T  48930580 cttcctgtctatgctcttaccttcttcaaggctccgtcaggtataat 48930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 50545091 - 50545033
Alignment:
Q  446 gtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||  ||||||| ||||||| ||| ||||||||||||||| | |||||||||||    
T  50545091 gtctatgcgttttccttcttcaaaggtccatcaggtataatctcttccattgaatcttt 50545033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 36709760 - 36709699
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||| |||| ||||| || |||||||||||  |||||||||||||| | |||||||||||    
T  36709760 cctgtcgatgctctttctttcttcaaagctccaacaggtataatctcttccattgaatcttt 36709699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 42674727 - 42674788
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| ||||| || |||||||||||  ||||| |||||||| | |||||||||||    
T  42674727 cctgtctatgctctttctttcttcaaagctccaacaggtgtaatctcttccattgaatcttt 42674788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 10868495 - 10868431
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||| |||||||| || |||||||  ||||||||||||||| | |||||||| |||||    
T  10868495 cctgtatatgctctttccttctttaaagctctatcaggtataatctcttccattgaatccttgtt 10868431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 483
Target Start/End: Complemental strand, 20797962 - 20797918
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtat 483  Q
    |||||||||||||||  ||||||| ||||||||||| ||||||||    
T  20797962 gcttcctgtctatgctttttccttcttcaaagctccctcaggtat 20797918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 504
Target Start/End: Complemental strand, 44888758 - 44888694
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||||||  ||||||| |||| ||| || |||||||||||||| ||  ||||||||||    
T  44888758 cttcctgtctatgctttttccttcttcagagcaccatcaggtataatctcaacccttgaatcttt 44888694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 210 - 507
Target Start/End: Complemental strand, 628 - 331
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||| || ||||||||    
T  628 ttggggtcaatattaatgcctcttggttgtctgaagcggcttctgtgttgggttgcaaagtgggtaaagttccgtttctctatttgggtcttccgattgg 529  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||  ||||  | ||||||||||||||||||||| ||||||||||||| || |||||||| |||||||| |||||| ||| ||| ||||||| |||||||    
T  528 aggcgatccacgtcggttattattttgggagcctgttgttaatcgtattaaatctagattttctggttggcatagtcggttcctctcctttggtggtcgc 429  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     |||| ||||||||||| ||| | |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  428 ctgattcttctcaaatccgtcctaactgcgcttcctgtctatgctctttcctttttcaaagctccgtcaagtataatctcttcaattgaatctttgtt 331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 7e-78; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 33515251 - 33515546
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||| || ||||||| || |||||||| |||||||| |    
T  33515251 ggggtgaatattaatgcctcttggttgtctgaagaggcttctatgttgggttgcaaagtgggtaaaatttcgtttctctatttgggccttccgattgggg 33515350  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||  ||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||||| |||||| ||| |||||| |||| | ||||  |    
T  33515351 gtgatccacgccggttattattttgggagcatgctgttaatcgtataaaatctagattgtctggttggcatagtcggttcctttcttttggtagtcgtct 33515450  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| |||| |||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||||    
T  33515451 gattcttcgcaaatccgtcctgactgcacttcctgtctatgcactttcctttttcaaagctccgtcaggtacaatctcttccattaaatctttgtt 33515546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 327 - 507
Target Start/End: Complemental strand, 12646517 - 12646337
Alignment:
Q  327 tattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatc 426  Q
    |||||||||||||| || ||||||||||||| || |||||||||||  |||| |||||| ||| ||| ||||||| ||||||| | || |||||||||||    
T  12646517 tattattttgggagtctgttgttaatcgtattaaatctagattgtcaagttggcatagtcggttcctctcctttggtggtcgcctaattcttctcaaatc 12646418  T
Q  427 tgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     ||| | |||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  12646417 cgtcctaactgcgcttcctgtctatgctctttcctttttcaaagctccgccaggtataatctcttccattgaatctttgtt 12646337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 28253811 - 28253516
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||| ||||||||| |||| |||||||  |||||||| || ||| |||||| |||  ||||||| || |||||||| |||||||| |    
T  28253811 ggggttaatattaatgcttcttggttgactgaagcggctttagtgttgggttgtaaattgggtacagtgtcgtttctctatttgggccttccgattgggg 28253712  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || |  |  | ||||||||||||||| | ||| |||||||||| || || |||||| |||||||||| | |||| |||  || || |||| ||||||| |    
T  28253711 gtgactctcgtcggttattattttggaaacctgttgttaatcgaattaaatctagactgtctggttgtcgtagtcggtttctctcttttggtggtcgcct 28253612  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     || |||||||| || ||| ||||||  |||| |||||||||||||||||||||||||| | ||||||||||||||||| | ||||||||| ||||    
T  28253611 aatccttctcaagtccgtcctgactgctcttcatgtctatgcactttcctttttcaaagtttcgtcaggtataatctcttccattgaatctctgtt 28253516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 409 - 507
Target Start/End: Complemental strand, 14440629 - 14440531
Alignment:
Q  409 cttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  14440629 cttgatacttctcaaatccgtcttgactgcgcttcctgtttatgcactttccttttttaaagctccgtcaggtataatctcttctattgaatctttgtt 14440531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 335 - 507
Target Start/End: Complemental strand, 13551541 - 13551369
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| |||||||| || |||||| |||| |||||  ||||| |||  || || |||| |||||||||| | ||||||||||||||| |||    
T  13551541 tgggaacctattgtgaatcgtattaaatctagactgtcaggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctga 13551442  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |     | |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||    
T  13551441 cctctttgcctgtctatgcactttccttcttcaaagctccatcaggtataatctcctctattgaatctttgtt 13551369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 417 - 504
Target Start/End: Complemental strand, 15018554 - 15018467
Alignment:
Q  417 ttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||| |||||||||||   |  |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  15018554 ttctcaaagctgtcttgacttctcggcctgtctatgcactttccttcttcaaagctccgtcaggtataatctctaccattgaatcttt 15018467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 407 - 504
Target Start/End: Original strand, 25380647 - 25380744
Alignment:
Q  407 cgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||| | |||||||||||||||||||||   || ||| ||||||||||||| || ||||||||||| ||||||||||||||| |||||||||||||    
T  25380647 cgcttggttcttctcaaatctgtcttgacttatctgcctctctatgcactttctttcttcaaagctccatcaggtataatctcttctattgaatcttt 25380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 439 - 490
Target Start/End: Original strand, 33583713 - 33583764
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33583713 gcttcctgtctatgctctttcctttttcaaagctccgtcaggtataatctct 33583764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 490
Target Start/End: Complemental strand, 13416649 - 13416490
Alignment:
Q  331 attttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtc 430  Q
    ||||||||| ||| | ||||| |||||||| |||||| |||||  ||| || ||| |||  ||||| ||||  ||||||||||| ||||| || ||| ||    
T  13416649 attttgggaacctgtggttaaccgtataaaatctagactgtctaattggcaaagtcggtttctttcatttggaggtcgcttgattcttctaaagtctatc 13416550  T
Q  431 ttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||| | ||| | ||||||||| |||||||| ||||| |||||  |||||| |||||||    
T  13416549 ttgaccgcgctacatgtctatgctctttccttcttcaaggctccagcaggtacaatctct 13416490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 332 - 490
Target Start/End: Original strand, 6724810 - 6724968
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||| ||| | ||||| |||||||| |||||| ||||| |||| || ||| |||  ||||| ||||  ||||| ||||| ||| | || | |||||    
T  6724810 ttttgggaacctgtggttaaccgtataaaatctagactgtctagttggcaaagtcggtttctttcatttggaggtcgtttgattcttttaaagtatgtct 6724909  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    |||  ||||| ||||||||||| |||||||| ||||| |||||  |||||| |||||||    
T  6724910 tgatcgtgctacctgtctatgctctttccttcttcaaggctccagcaggtacaatctct 6724968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 483
Target Start/End: Complemental strand, 6824266 - 6824222
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtat 483  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  6824266 gcttcctgtctatgcactttccttcttcaaagctccgtcaagtat 6824222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 8065551 - 8065611
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  8065551 ctgtctatgctttttccttcttcaaagctccatcaggtataatctcttccattgaatcttt 8065611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 507
Target Start/End: Original strand, 22724729 - 22724792
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||| |||||||| || |||||| ||| ||||||||||||||| |||||||| |||||    
T  22724729 ctgtctatgctctttccttctttaaagcttcgttaggtataatctctaccattgaatcattgtt 22724792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 502
Target Start/End: Original strand, 44028503 - 44028561
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||||| |||||||| ||||| ||||| ||| ||||||||||| |||||||||||    
T  44028503 ctgtctatgctctttccttcttcaaggctccatcatgtataatctcttctattgaatct 44028561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 504
Target Start/End: Complemental strand, 45422392 - 45422310
Alignment:
Q  422 aaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||   || ||||||||||| ||||| || ||||||||||| ||||||||||| ||| |  ||||||||||    
T  45422392 aaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatcttt 45422310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 28399839 - 28399900
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| ||||| || |||||||||||  |||||||||||||| | |||||||||||    
T  28399839 cctgtctatgctctttctttcttcaaagctccagcaggtataatctcttccattgaatcttt 28399900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 35488689 - 35488628
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||  ||||||| || |||||||| ||||||||||||||| | |||||||||||    
T  35488689 cctgtctatgctttttccttctttaaagctccttcaggtataatctcttccattgaatcttt 35488628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 502
Target Start/End: Original strand, 3153071 - 3153167
Alignment:
Q  406 tcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||| || || || |||||| || ||  ||| |||||||| || ||||| ||||||||||||||  |||||||||||||| | |||||||||    
T  3153071 tcgcttgattctccttaagtctgtcctgtcttcgctgcctgtctacgccctttcttttttcaaagctcccgcaggtataatctcttccattgaatct 3153167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 11233778 - 11233842
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||| |||||||| || |||||||| ||||||||| ||||| | ||||||||||||||    
T  11233778 cctgtttatgctctttccttctttaaagctccatcaggtatagtctcttccattgaatctttgtt 11233842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 507
Target Start/End: Original strand, 9668296 - 9668359
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||| || ||||| || |||||||| |||| |||||||||| | ||||||||||||||    
T  9668296 ctgtctatgctctgtccttctttaaagctccatcagatataatctcttccattgaatctttgtt 9668359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 502
Target Start/End: Original strand, 10289351 - 10289414
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||||||| |||||||| ||||||||||| ||| |||| ||| |  |||||||||||    
T  10289351 gcttcctgtctatgctctttccttcttcaaagctccctcaagtatcatcgcctctattgaatct 10289414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 26147066 - 26147023
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||    
T  26147066 cctgtctatgctctttccttcttcaaggctccgtcaggtataat 26147023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 43311110 - 43311067
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||    
T  43311110 cctgtctatgctctttccttcttcaaggctccgtcaggtataat 43311067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 332 - 490
Target Start/End: Original strand, 2207000 - 2207158
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||||||| | ||| | ||||| || |||||| ||||  |||| || ||| |||  ||||||||||  ||||| ||||| ||| | || || ||||    
T  2207000 ttttgggagcctgtggttcaccgtattaaatctagactgtccagttggcaaagtcggtttctttcctttggaggtcgtttgattcttgtaaagtccgtct 2207099  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    || | | ||| ||||||||||| |||||||| ||||| |||||  |||||| |||||||    
T  2207100 tgtccgcgctacctgtctatgctctttccttcttcaaggctccagcaggtacaatctct 2207158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 507
Target Start/End: Complemental strand, 11197197 - 11197139
Alignment:
Q  449 tatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||| || ||||| ||||||||||||||||||||||  ||||||||| ||||    
T  11197197 tatgctctttcattcttcaaggctccgtcaggtataatctctatcattgaatctatgtt 11197139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 39116308 - 39116365
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||| |||||||||||||| ||||| ||||||||  ||||  |||||||||||    
T  39116308 tgtctatgctctttcctttttcaaggctccatcaggtattgtctcctctattgaatct 39116365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 483
Target Start/End: Original strand, 20946878 - 20946918
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtat 483  Q
    ||||| ||||| ||||| |||||||||||||||||||||||    
T  20946878 cctgtttatgccctttcttttttcaaagctccgtcaggtat 20946918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 4e-73; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 48313176 - 48312881
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || ||||||||||||||||||||||| || |||||||||||||| ||||||||||  ||| ||||||| || || |||||||| |||||||| |    
T  48313176 ggggtgaatattaatgcctcttggttgtctgaagcagcttctgtgttgggttgcaaagtggaaaaaattccgttcctctatttgggccttccgattgggg 48313077  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || || || ||||||||||||||||| ||||| |||||||| |||| ||  |||||||||||||||| |||||| ||| |||||| |||| | ||||  |    
T  48313076 gtgattcgcgccggttattattttggaagcctgttgttaattgtattaaaactagattgtctggttggcatagtcggttcctttcttttggtcgtcgtct 48312977  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     || ||||||||||  ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  48312976 aattcttctcaaattcgtcatgactgcacttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 48312881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 210 - 507
Target Start/End: Original strand, 55724763 - 55725060
Alignment:
Q  210 ttggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattgg 309  Q
    ||||| |||| ||||||||||||||| ||||||| |||||||||||| |||| |||||| |||||||||||| |||||| || |||||  | ||||||||    
T  55724763 ttgggatcaatattaatgcctcttggctgtctgaagcggcttctgtgctgggttgcaaaatgggtaaagttctgtttctctatttgggtattccgattgg 55724862  T
Q  310 aggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgc 409  Q
    |||  ||||| | ||||||||||||||| ||||| || |||||||||| || ||||||||||||  ||| |||||| ||| ||| ||||||| |||||||    
T  55724863 aggcgatccgcgtcggttattattttggaagcctgttattaatcgtattaaatctagattgtctatttggcatagtcggttcctctcctttggtggtcgc 55724962  T
Q  410 ttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     |||| ||||||||||| ||| | | |||||||||||||||||  ||||||||||||||||||||||| |||||||||||| | ||||||||||||||    
T  55724963 ctgattcttctcaaatccgtcctaaatgtgcttcctgtctatgttctttcctttttcaaagctccgtcgggtataatctcttccattgaatctttgtt 55725060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 233 - 504
Target Start/End: Original strand, 19733068 - 19733338
Alignment:
Q  233 tggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattat 332  Q
    ||||||||||| |||||||||||||| ||  ||||||||||||||||  |||| || || ||||| || |||||||| ||  ||| | | |||||||| |    
T  19733068 tggttgtctgaagcggcttctgtgttaggtcgcaaagtgggtaaagtgtcgttcctctatttgggtcttccgattgggggcgatcggcgtcggttattgt 19733167  T
Q  333 tttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtctt 432  Q
    ||||||||||| | |||||||| || ||  ||||||||| |||||  |||||| ||| |||||| |||| |||||| ||||| ||||||||||||||| |    
T  19733168 tttgggagcctgt-gttaatcgaattaaagctagattgtttggttagcatagtcggttcctttcttttggtggtcgattgatccttctcaaatctgtcct 19733266  T
Q  433 gactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  19733267 gactgcccttcctgtctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatcttt 19733338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 233 - 507
Target Start/End: Complemental strand, 19756328 - 19756054
Alignment:
Q  233 tggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattat 332  Q
    |||||||| || ||||||||||||||||| |||||||| |||||| |||||||||| || ||||| ||| ||||||| ||| ||||| |  |  | || |    
T  19756328 tggttgtcagaagcggcttctgtgttgggttgcaaagtaggtaaaattccgtttctctatttggggctctcgattgggggtgatccgcgttgtcttttgt 19756229  T
Q  333 tttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtctt 432  Q
    ||||||| ||| |||| |||||||| || ||||||||||||||||| || ||| ||| |||||| || | |||||| ||||| || || || || ||| |    
T  19756228 tttgggaacctgttgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtccgtcct 19756129  T
Q  433 gactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||    
T  19756128 gactgcgctacctgtctatgcactttcctttttcaaaactctgtcaggtataatctcttccattgaatctttgtt 19756054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 233 - 507
Target Start/End: Original strand, 19783478 - 19783752
Alignment:
Q  233 tggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattat 332  Q
    |||||||| || ||||||||||||||||| |||||||| |||||| |||||||||| || ||||| ||| ||||||| ||| ||||| |  |  | || |    
T  19783478 tggttgtcagaagcggcttctgtgttgggttgcaaagtaggtaaaattccgtttctctatttggggctctcgattgggggtgatccgcgttgtcttttgt 19783577  T
Q  333 tttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtctt 432  Q
    ||||||| ||| |||| |||||||| || ||||||||||||||||| || ||| ||| |||||| || | |||||| ||||| || || || || ||| |    
T  19783578 tttgggaacctgttgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctttctttcggtggtcgtttgattctactaaagtccgtcct 19783677  T
Q  433 gactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||||    
T  19783678 gactgcgctacctgtctatgcactttcctttttcaaaactctgtcaggtataatctcttccattgaatctttgtt 19783752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 1827598 - 1827893
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || ||||| ||||||||||| |||||||| |||||| |  ||||||| || ||||| ||| | ||||| |    
T  1827598 ggggttaatattaatgattcgtggttgtcagaagcggcctctgtgttgggttgcaaagtaggtaaaatctcgtttctctatttggggctctcaattgggg 1827697  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || ||||  | ||  | || |||||||| |||||||| |||||||| || ||||||||||||||||| || ||| ||| ||| || || | ||| || ||    
T  1827698 gtgatccacgtcgtattttgttttgggaacctattgtgaatcgtattaaatctagattgtctggttggcaaagtcggttcctctctttcggtggccgttt 1827797  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || || ||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  1827798 gattcttctaaagtccgtcctgactgctcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 1827893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 23641649 - 23641944
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  23641649 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggg 23641748  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | ||  | || |||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||| ||    
T  23641749 gcgatccgcgtcgtcttttgttttgggaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgttt 23641848  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || |||||| ||||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  23641849 gattcttctaaagtctgtcctgactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 23641944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 23647307 - 23647602
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  23647307 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggg 23647406  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | |   | || |||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||  ||    
T  23647407 gcgatccgcgtcatcttttgttttgggaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcattt 23647506  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || |||||| ||||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  23647507 gattcttctaaagtctgtcctgactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 23647602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 47419886 - 47419591
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| || ||| | |||||||| || ||||| ||| ||||||| |    
T  47419886 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggcaaaatcccgtttctctatttggggctctcgattgggg 47419787  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | ||  | || |||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||| ||    
T  47419786 gcgatccgcgtcgtcttttgttttgggaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgttt 47419687  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| || || || || ||| ||||||  || |||||||||||||| ||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  47419686 gattctactaaagtcggtcctgactgctctccctgtctatgcactctccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 47419591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 11586242 - 11586536
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||||||||||||||||||||||||| || | |||||| |||| ||||| |||||| ||||||| || | ||| || || |||||||| | |||||       
T  11586242 ggggtcaacattaatgcctcttggttgactaaagcggctcctgttttgggttgcaaattgggtaa-gtactgttcctctatttgggccttcagattgcgt 11586340  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
     | ||||  |||| |||||||||||||| ||| |||||||||| || || |||||| ||||| | ||  | ||| ||| |||||| |||| ||||||| |    
T  11586341 ctgatccttgccgtttattattttgggaacctgttgttaatcgaattaaatctagactgtctagatggaagagtcggttcctttcttttggtggtcgcct 11586440  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     || ||||| |||| |||| |||||   |||||||| || || |||||||||| |||||||| || ||||||||| ||| | ||||||||||||||    
T  11586441 aatccttctaaaatttgtcctgactacacttcctgtgtacgctctttccttttacaaagctctgtaaggtataatttcttccattgaatctttgtt 11586536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 332 - 504
Target Start/End: Original strand, 29552979 - 29553151
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||| |||||||| |||||||| |   ||||| |||| |||||  ||||| | | |||||| |||| |||||| ||| | ||||||||| ||||||    
T  29552979 ttttgggatcctattgtgaatcgtattagaactagactgtcgggttggaatagttgtttcctttcttttggtggtcgtttggttcttctcaaagctgtct 29553078  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||   || ||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  29553079 tgacttctctgcctgtctatgctctttccttcttcaaagctccgtcaggtataatctcttccattgaatcttt 29553151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 335 - 507
Target Start/End: Complemental strand, 55299580 - 55299408
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| |||||||| || ||||||||||| |||||  ||||| |||  || || |||| |||||||||| | || ||||||||||||||||    
T  55299580 tgggaacctattgtgaatcgtattaaatctagattgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttga 55299481  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |    || |||||||||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||||||    
T  55299480 cctctctgcctgtctatgcactttccttcttcaaagctccaacaggtataatctcctctattgattctttgtt 55299408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 46843369 - 46843474
Alignment:
Q  92 ttattgtggtaacacatttcattttggtttgtnnnnnnnnnnnnnctataattttaaagtatctatatttgtcttcatgcatcaagagaacgatcattca 191  Q
    ||||||||||||||||||||||||||||||||             ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46843369 ttattgtggtaacacatttcattttggtttgttaaaaaaaaaaaactataattttagagtatctatatttgtcttcatgcatcaagagaacgatcattca 46843468  T
Q  192 atataa 197  Q
    ||||||    
T  46843469 atataa 46843474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 335 - 507
Target Start/End: Original strand, 23872658 - 23872830
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| |||||||| || |||||| |||| |||||  ||||| |||  || || |||| |||||||||| | || ||||||||||||||||    
T  23872658 tgggaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttga 23872757  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |    || |||||||||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||||||    
T  23872758 cctctctgcctgtctatgcactttccttcttcaaagctccagcaggtataatctcctctattgattctttgtt 23872830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 439 - 507
Target Start/End: Original strand, 54482445 - 54482513
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  54482445 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 54482513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 398 - 504
Target Start/End: Complemental strand, 19115332 - 19115226
Alignment:
Q  398 tttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattg 497  Q
    |||| ||| |||||| | ||||||||| |||||||||||   ||  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  19115332 tttggtggccgcttggttcttctcaaagctgtcttgacttctctgtctgtctatgcactttccttcttcaaagctccgtcaggtataatctctaccattg 19115233  T
Q  498 aatcttt 504  Q
    |||||||    
T  19115232 aatcttt 19115226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 507
Target Start/End: Complemental strand, 20675988 - 20675822
Alignment:
Q  341 cctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgc 440  Q
    |||||||| |||||||| || |||||| |||| |||||  ||||| |||   | || |||| |||||||||| | || |||||||||||||||||    |    
T  20675988 cctattgtgaatcgtattaaatctagactgtcgggttgtaatagtcggtttttctcttttggtggtcgcttggttctactcaaatctgtcttgacctctc 20675889  T
Q  441 ttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    | ||||||||||||||||| || |||||||||||  |||||||||||||  ||||||||||||||||    
T  20675888 tgcctgtctatgcactttcattcttcaaagctccagcaggtataatctcctctattgaatctttgtt 20675822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 504
Target Start/End: Complemental strand, 19648701 - 19648485
Alignment:
Q  288 tatacttgggcctcccgattggaggtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtag 387  Q
    ||||||||||| | |||||||| ||||||||  | || || |  || ||||| ||| |||| ||||||||||| |||||| |||| |||||  ||||| |    
T  19648701 tatacttgggcatgccgattggtggtaatcctcgtcgtttgtgtttctgggaccctgttgtgaatcgtataaaatctagagtgtcaggttggaatagtcg 19648602  T
Q  388 gtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatc 487  Q
     | ||| || |||| ||| || ||| | |||||||||||||| |||||    || ||||||||||| ||||| || |||||||||||||||||||||||     
T  19648601 tttcctctcttttgctggccgtttggttcttctcaaatctgtgttgacctctctacctgtctatgctctttctttcttcaaagctccgtcaggtataatt 19648502  T
Q  488 tctactattgaatcttt 504  Q
    |||||  ||||||||||    
T  19648501 tctacccttgaatcttt 19648485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 451 - 507
Target Start/End: Complemental strand, 15741063 - 15741007
Alignment:
Q  451 tgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  15741063 tgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 15741007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 332 - 490
Target Start/End: Complemental strand, 40689043 - 40688884
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||| ||| | ||||| |||||||| |||||| ||||| |||| || ||| |||  ||||| ||||  ||||||||||| ||| | || |||||||    
T  40689043 ttttgggaacctgtggttaaccgtataaaatctagactgtctagttggcaaagtcggtttctttcttttggaggtcgcttgattcttttaaagtctgtct 40688944  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaa-gctccgtcaggtataatctct 490  Q
    |||||| |||  |||||||||| |||||||| |||||| |||||  |||||| |||||||    
T  40688943 tgactgcgctatctgtctatgctctttccttcttcaaaggctccagcaggtacaatctct 40688884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 46838772 - 46838815
Alignment:
Q  137 ctataattttaaagtatctatatttgtcttcatgcatcaagaga 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  46838772 ctataattttaaagtatctatatttgtcttcatgcatcaagaga 46838815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 500
Target Start/End: Complemental strand, 8936033 - 8935868
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| ||| |||| |||||||||||  ||||| |||| |||||  ||||| | | ||| || |||| | | || ||| | |||||||||||||| ||||    
T  8936033 tgggaccctgttgtgaatcgtataaaaactagactgtcaggttggaatagtcgtttcctctcttttggttgccgtttggttcttctcaaatctgtgttga 8935934  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaat 500  Q
    |    ||  |||||||||| |||||||| ||||||||||||||||||||||||||| | |||||||    
T  8935933 cctctctgtctgtctatgctctttccttcttcaaagctccgtcaggtataatctctgccattgaat 8935868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 490
Target Start/End: Original strand, 19162377 - 19162505
Alignment:
Q  362 tctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcct 461  Q
    |||||| ||||| |||| || |||||||  ||||||||||  ||||||||||| ||| | || | ||||||||| | ||| ||||||||||| |||||||    
T  19162377 tctagactgtctagttggcaaagtaggtttctttcctttggaggtcgcttgattcttttaaagtatgtcttgaccgcgctacctgtctatgctctttcct 19162476  T
Q  462 ttttcaaagctccgtcaggtataatctct 490  Q
    | ||||| |||||  |||||| |||||||    
T  19162477 tcttcaaggctccagcaggtacaatctct 19162505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 42952820 - 42952884
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||| || |||||||| ||||||||||||||| | ||||||||||||||    
T  42952820 cctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatctttgtt 42952884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 34976792 - 34976731
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  34976792 cctgtttatgcgctttccttcttcaaagctccatcaggtataatctcttccattgaatcttt 34976731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 42779100 - 42779040
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||||| | ||||| |||||    
T  42779100 ctgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccattgattcttt 42779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 491
Target Start/End: Complemental strand, 9691301 - 9691226
Alignment:
Q  416 cttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctcta 491  Q
    |||||||| |||||| | |||  ||||||||| ||||| |||||||| ||||||| || |||||||||||||||||    
T  9691301 cttctcaagtctgtccttacttcgcttcctgtttatgctctttccttcttcaaagttctgtcaggtataatctcta 9691226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 504
Target Start/End: Original strand, 7662576 - 7662658
Alignment:
Q  422 aaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||   || ||||||||||| ||||| || ||||||||||| ||||||||||| ||| |  ||||||||||    
T  7662576 aaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatcttt 7662658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 10562614 - 10562660
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||    
T  10562614 ctgtctatgcgctttccttcttcaaagctccatcaggtataatctct 10562660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 490
Target Start/End: Complemental strand, 20396432 - 20396386
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||    
T  20396432 ctgtctatgcgctttccttcttcaaagctccatcaggtataatctct 20396386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 26694779 - 26694718
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| ||||| || |||||||||||  |||||||||||||| | |||||||||||    
T  26694779 cctgtctatgccctttctttcttcaaagctccaacaggtataatctcttccattgaatcttt 26694718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 483
Target Start/End: Original strand, 3129214 - 3129305
Alignment:
Q  392 ctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtat 483  Q
    ||||||||||  ||||| ||| ||||| | |||||||||||||||   || ||||||||||| ||||| || |||||| |||| ||||||||    
T  3129214 ctttcctttggaggtcgtttggtacttttaaaatctgtcttgacttctctgcctgtctatgccctttctttcttcaaaactccatcaggtat 3129305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 502
Target Start/End: Original strand, 19308836 - 19308935
Alignment:
Q  403 tggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||||||| ||||| || |||||| || ||   || |||||||| || ||||| ||||||| ||||||  |||||||||||||| | |||||||||    
T  19308836 tggtcgcttgattcttcttaagtctgtcctgtcttcactgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttccattgaatct 19308935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 19837986 - 19837927
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||| || ||||| ||||||| ||||||  |||||||||||||||| |||||||||    
T  19837986 cctgtctacgccctttcttttttcagagctcccgcaggtataatctctaccattgaatct 19837927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 38296556 - 38296513
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||    
T  38296556 cctgtctatgctctttccttcttcaaggctccgtcaggtataat 38296513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 43516037 - 43516084
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||| |||||||| ||||| ||||| |||||||||||||||    
T  43516037 cctgtctatgctctttccttcttcaaggctccatcaggtataatctct 43516084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Complemental strand, 2072389 - 2072344
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||| ||||| || |||||||||||||||| ||||||||||    
T  2072389 tgtctatgctctttctttcttcaaagctccgtcagatataatctct 2072344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Complemental strand, 36952141 - 36952092
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||||| |||||||| || |||||| |||| |||||    
T  36952141 ctttcctttttcaaagctccctcaggtatcatttctactcttgattcttt 36952092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 475
Target Start/End: Complemental strand, 15342671 - 15342639
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccg 475  Q
    ||||||||||| |||||||||||||||||||||    
T  15342671 cctgtctatgccctttcctttttcaaagctccg 15342639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 504
Target Start/End: Original strand, 53486215 - 53486279
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||   ||||||| ||||||||||| ||| ||||||||||| | ||||| |||||    
T  53486215 cttcctgtctatgtgttttccttcttcaaagctccatcaagtataatctcttccattgattcttt 53486279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 233 - 507
Target Start/End: Complemental strand, 4313 - 4039
Alignment:
Q  233 tggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattat 332  Q
    |||||||| || |||||||||||||||||||||||||| |||||| |||||||||| || ||||| ||| ||||||| ||| ||||  | ||  | || |    
T  4313 tggttgtcggaagcggcttctgtgttggggtgcaaagtaggtaaaattccgtttctctatttggggctctcgattgggggtgatccacgtcgacttttgt 4214  T
Q  333 tttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtctt 432  Q
    ||||||| ||| |||| || ||||| || ||||| ||||||||||  || ||| ||| ||||||||| | |||||| ||||| ||||| || || ||| |    
T  4213 tttgggaacctgttgtgaaccgtattaaatctaggttgtctggttcgcaaagttggttcctttccttcggtggtcgtttgattcttctaaagtccgtcct 4114  T
Q  433 gactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||  || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  4113 gactgctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 4039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 5e-51; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 233 - 507
Target Start/End: Complemental strand, 17721696 - 17721422
Alignment:
Q  233 tggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggaggtaatccgggccggttattat 332  Q
    |||||||| || |||||||| |||||||| |||||||| |||||| | |||||||| || ||||| ||| ||||||| ||| ||||| | || ||||| |    
T  17721696 tggttgtcagaagcggcttccgtgttgggttgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggggtgatccgcgtcgattattgt 17721597  T
Q  333 tttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtctt 432  Q
    ||||||| ||| |||||||||| || ||   ||||||||||||||| || ||| ||| |||||| |||| |||||| ||| | ||||| || |  ||| |    
T  17721596 tttgggaacctgttgttaatcgcattaaaaatagattgtctggttggcaaagtcggttcctttcttttggtggtcgtttggttcttcttaagttcgtcct 17721497  T
Q  433 gactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||  || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  17721496 gactgctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 17721422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 4937186 - 4937481
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  4937186 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggg 4937285  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | ||  | || |||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||| ||    
T  4937286 gcgatccgcgtcgtcttttgttttgggaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgttt 4937385  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || |||||| ||||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  4937386 gattcttctaaagtctgtcctgactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 4937481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 29969056 - 29968761
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    |||||||| |||||||  || |||||||| || |||||||||||||||||||||||||| |||||| | | |||||| || ||||| ||| ||||||| |    
T  29969056 ggggtcaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcctgtttctctatttggggctctcgattgggg 29968957  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    ||  |||  | ||  | || |||||||| ||| |||| || ||||| || ||||||||| ||||||| || ||| ||| ||||||||| | ||| || ||    
T  29968956 gtggtccacgtcgacttttgttttgggaacctgttgtgaaccgtattaaatctagattggctggttggcaaagtcggttcctttccttcggtggccgttt 29968857  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || || ||| ||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  29968856 gattcttctaaagtccgtcctgactgctctacctgtctatgctctttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 29968761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 369 - 507
Target Start/End: Original strand, 11276463 - 11276601
Alignment:
Q  369 tgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaa 468  Q
    |||||||||| || ||| ||| |||||| || | |||||| ||||| || || || || ||| ||||||  || ||||||||||||||||||||||||||    
T  11276463 tgtctggttggcaaagttggttcctttctttcggtggtcgtttgattctcctaaagtccgtcctgactgctctacctgtctatgcactttcctttttcaa 11276562  T
Q  469 agctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  11276563 agctccgtcaggtataatctcttccattgaatctttgtt 11276601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 335 - 504
Target Start/End: Complemental strand, 45993535 - 45993366
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| ||| |||| |||||||||||||||||| |||| |||||  ||||| | | ||| || |||| |||||| ||| | |||||||||||||| ||||    
T  45993535 tgggaccctgttgtgaatcgtataaagtctagactgtcaggttggaatagtcgtttcctctcttttggtggtcgtttggttcttctcaaatctgtgttga 45993436  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |    || ||||||||||| ||||| || |||||||||||||||||||||||||||||  ||||||||||    
T  45993435 cctctctgcctgtctatgctctttctttcttcaaagctccgtcaggtataatctctacccttgaatcttt 45993366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 404 - 507
Target Start/End: Original strand, 27218372 - 27218475
Alignment:
Q  404 ggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctt 503  Q
    ||||||||| | ||||| || ||||||||||||  ||||| |||||||||||||||||| ||||| ||||||||||||||||| |||   ||||||||||    
T  27218372 ggtcgcttggttcttcttaagtctgtcttgacttcgcttcatgtctatgcactttccttcttcaaggctccgtcaggtataatttctctcattgaatctt 27218471  T
Q  504 tgtt 507  Q
    ||||    
T  27218472 tgtt 27218475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 507
Target Start/End: Complemental strand, 13441017 - 13440845
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| |||||||| || |||||| |||| |||||  ||||| |||  || || | || |||||||||| | || ||||||| ||||||||    
T  13441017 tgggaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttgtggtggtcgcttggttctactcaaatatgtcttga 13440918  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |    || ||||||||||| |||||||| |||||||||||  |||||||||||||  ||||||| ||||||||    
T  13440917 cctctctgcctgtctatgcgctttccttcttcaaagctccagcaggtataatctcctctattgattctttgtt 13440845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 454 - 507
Target Start/End: Complemental strand, 31423434 - 31423381
Alignment:
Q  454 actttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  31423434 actttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 31423381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 29917069 - 29917010
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||    
T  29917069 tgtctatgcactttccttcttcaaagctccctcaggtacaatctcttctattgaatcttt 29917010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 23054259 - 23054320
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||| | |||||||||||    
T  23054259 cctgtctatgcactttccttctttaaagctctgtcaggtataatctcttccattgaatcttt 23054320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 19735369 - 19735305
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||| || |||||||| ||||||||||||||| | ||||||||||||||    
T  19735369 cctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatctttgtt 19735305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 504
Target Start/End: Original strand, 36227329 - 36227501
Alignment:
Q  332 ttttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtct 431  Q
    |||||||| |||||||| ||||| || ||||||||| |||| |||||  |||| | ||  || || || | ||| |||||||| ||||| ||| | || |    
T  36227329 ttttgggaccctattgtgaatcgcattaagtctagactgtcgggttggaatagcaagtttctctcgttcggtggccgcttgatccttcttaaagcagttt 36227428  T
Q  432 tgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||   || ||||||||||| ||||| || ||||||||||| ||||||||||| ||| | |||||||||||    
T  36227429 tgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttccattgaatcttt 36227501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 440 - 507
Target Start/End: Original strand, 22819003 - 22819070
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||| | |||||  |||||||||||||    
T  22819003 cttcctgtctatgcactttccttcttcagagctccatcaggtatactttctacccttgaatctttgtt 22819070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 490
Target Start/End: Original strand, 45164785 - 45164883
Alignment:
Q  392 ctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||  ||||||||||| ||| | || ||||||||||| | ||| ||||||||||| |||||||| ||||| |||||  |||||| |||||||    
T  45164785 ctttcctttggaggtcgcttgattcttttaaagtctgtcttgaccgcgctacctgtctatgctctttccttcttcaaggctccagcaggtacaatctct 45164883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 2820012 - 2820069
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||  |||||||| |||||||| |||||||||||||||||| |||||||||||    
T  2820012 tgtctatgttctttccttcttcaaagccccgtcaggtataatctcttctattgaatct 2820069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 4078128 - 4078067
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| |||||||| |||| |||||| ||||||||||||||| || ||||||||||    
T  4078128 cctgtctatgcgctttccttcttcagagctccatcaggtataatctcttcttttgaatcttt 4078067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 34232550 - 34232491
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||||| | ||||| |||||    
T  34232550 tgtctatgcgctttccttcttcaaagctccatcaggtataatctcttccattgattcttt 34232491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 504
Target Start/End: Complemental strand, 41340398 - 41340339
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||| |||||||| ||||||||| ||| ||||||||||||| | |||||||||||    
T  41340398 tgtctatgccctttccttcttcaaagcttcgtaaggtataatctcttccattgaatcttt 41340339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 504
Target Start/End: Complemental strand, 46626694 - 46626612
Alignment:
Q  422 aaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||   || ||||||||||| ||||| || ||||||||||| |||| |||||||||| |  ||||||||||    
T  46626694 aaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcagatataatctcttcccttgaatcttt 46626612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 502
Target Start/End: Complemental strand, 4164930 - 4164831
Alignment:
Q  403 tggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||||||| || || || |||||| || ||  ||| |||||||| || ||||| ||||||| ||||||  |||||||||||||| | |||||||||    
T  4164930 tggtcgcttgattctccttaagtctgtcctgtcttcgctgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttccattgaatct 4164831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 507
Target Start/End: Complemental strand, 4344684 - 4344637
Alignment:
Q  460 ctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||| ||||    
T  4344684 ctttttcaaagctccctcatgtataatctcttctattgaatctatgtt 4344637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 502
Target Start/End: Complemental strand, 34207221 - 34207122
Alignment:
Q  403 tggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||||||| || || || |||||| || ||  ||| |||||||| || ||||| ||||||| ||||||  |||||||||||||| | |||||||||    
T  34207221 tggtcgcttgattctccttaagtctgtcctgtcttcgctgcctgtctacgccctttcttttttcagagctcccgcaggtataatctcttccattgaatct 34207122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 45871614 - 45871555
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||| ||||| |||||||| ||||||||||| |||||||| || ||| |||||||||||    
T  45871614 cctgtttatgctctttccttcttcaaagctccttcaggtattatttcttctattgaatct 45871555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 474
Target Start/End: Original strand, 6335646 - 6335712
Alignment:
Q  408 gcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctcc 474  Q
    ||||||| ||||| || ||||||||||||| | | ||||||||||| |||||||| ||||| |||||    
T  6335646 gcttgattcttctaaagtctgtcttgactgcgttacctgtctatgctctttccttcttcaaggctcc 6335712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Original strand, 13063106 - 13063155
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||||||||| ||  |||||||||| ||| |||||||||||||    
T  13063106 ctttcctttttcaaagcccctgcaggtataatttcttctattgaatcttt 13063155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 504
Target Start/End: Complemental strand, 18768259 - 18768198
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| ||||| || |||||||||||  || ||||||||||| | |||||||||||    
T  18768259 cctgtctatgctctttctttcttcaaagctccaacaagtataatctcttccattgaatcttt 18768198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Original strand, 22865030 - 22865079
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||||| ||| ||||||| |||||| |||| |||||    
T  22865030 ctttcctttttcaaagctccctcatgtataatttctactcttgactcttt 22865079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 500
Target Start/End: Original strand, 34791964 - 34792021
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaat 500  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||| |  |||||||||    
T  34791964 cctgtctatgccctttccttcttcaaagctccctcaggtatcatcgcctctattgaat 34792021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 39930887 - 39930932
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||| |||||||| ||||||||||| ||| |||||||||||    
T  39930887 tgtctatgctctttccttcttcaaagctccatcatgtataatctct 39930932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 504
Target Start/End: Complemental strand, 47554229 - 47554180
Alignment:
Q  455 ctttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||||||| |||||||| || |||||| |||| |||||    
T  47554229 ctttcctttttcaaagctccctcaggtatcatttctactcttgactcttt 47554180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 504
Target Start/End: Complemental strand, 17056383 - 17056319
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||||||  ||||||| |||| ||| || |||||||||||||| ||  ||||||||||    
T  17056383 cttcctgtctatgctttttccttcttcagagcaccatcaggtataatctcaacccttgaatcttt 17056319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 504
Target Start/End: Complemental strand, 18672021 - 18671961
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||  |||||||| |||||||||   ||||||||||||||| | |||||||||||    
T  18672021 ctgtctatgatctttccttcttcaaagctatatcaggtataatctcttccattgaatcttt 18671961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 28173273 - 28173333
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||| ||||  || |||||||||||||||| ||| |||||| | |||||||||||    
T  28173273 ctgtctatgctctttttttcttcaaagctccgtcagatattatctcttccattgaatcttt 28173333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 500
Target Start/End: Original strand, 33820809 - 33820905
Alignment:
Q  404 ggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaat 500  Q
    ||||| ||||| |||||||| |||||| ||||    || ||| ||||||  |||||||| ||||||||||| |||||||| |||||| | |||||||    
T  33820809 ggtcggttgattcttctcaattctgtcctgacctctctgcctatctatgttctttccttcttcaaagctccatcaggtattatctcttccattgaat 33820905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 104901 - 105196
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  104901 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggg 105000  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | ||  | || |||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||| ||    
T  105001 gcgatccgcgtcgtcttttgttttgggaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgttt 105100  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || |||||| ||||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  105101 gattcttctaaagtctgtcctgactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 105196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 6051685 - 6051390
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||  || |||||||| || |||||||||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  6051685 ggggttaatattaatgattcgtggttgtcagaagcggcttctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattgggg 6051586  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||| | ||  | || |||||||| ||| | ||  ||||||| || ||||||||||||||||| || ||| ||| ||| || || | |||||| ||    
T  6051585 gcgatccgcgtcgtcttttgttttgggaacctgtggtggatcgtattaaatctagattgtctggttggcaaagtcggttcctatctttcggtggtcgttt 6051486  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || |||||| ||||||  || |||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||    
T  6051485 gattcttctaaagtctgtcctgactgctctacctgtctatgcactttccttcttcaaagctccgacaggtataatctcttccattgaatctttgtt 6051390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 212 - 507
Target Start/End: Complemental strand, 35542116 - 35541821
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    |||||||| |||||||  || |||||||| || ||||| |||||||||||||||||||| |||||| | |||||||| || ||||| ||| ||||||| |    
T  35542116 ggggtcaatattaatgattcgtggttgtcagaagcggcatctgtgttggggtgcaaagtaggtaaaatcccgtttctctatttggggctctcgattggcg 35542017  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    |  ||||  | ||  | || |||||||| ||| |||| || ||||| || | ||||||| ||||||| || ||| |||  |||||||| | ||| || ||    
T  35542016 gcgatcctcgtcgacttttgttttgggaacctgttgtgaaccgtattaaatatagattggctggttggcaaagtcggtttctttccttaggtggccgttt 35541917  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||| ||||| || || ||| ||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  35541916 gattcttctaaagtccgtcctgactgctctacctgtctatgcactttcctttttcaaagctccgtcaggtataatctcttccattgaatctttgtt 35541821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 212 - 507
Target Start/End: Original strand, 47622135 - 47622430
Alignment:
Q  212 ggggtcaacattaatgcctcttggttgtctgaggcggcttctgtgttggggtgcaaagtgggtaaagttccgtttctatacttgggcctcccgattggag 311  Q
    ||||| || |||||||| |||||||||  ||| ||| |||| |||||||| || ||| |||||| | |  |||| || || |||||||| |||||||| |    
T  47622135 ggggttaatattaatgcttcttggttgattgaagcgacttcagtgttgggctgtaaattgggtacaatgtcgttcctttatttgggccttccgattgggg 47622234  T
Q  312 gtaatccgggccggttattattttgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgctt 411  Q
    || | ||  | | ||||||||||||||| ||| |||||||||| || || ||||||||||||||||| | |||| |||  || || |||| ||||||| |    
T  47622235 gtgaccctcgacagttattattttgggaacctgttgttaatcgaattaaatctagattgtctggttggcgtagtcggtttctctcttttggtggtcgcct 47622334  T
Q  412 gatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
     || ||||| || |||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||    
T  47622335 aatccttctaaagtctgtcctgactgctcttcctgtctatgcactttcctttttcaaagctccgtcagatataatctcttccattgaatctctgtt 47622430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 507
Target Start/End: Complemental strand, 5498045 - 5497873
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| |||||||| || |||||| |||| |||||  ||||| |||  || || |||| |||||||||| | ||||||||||||||| |||    
T  5498045 tgggaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctatcttttggtggtcgcttggttcttctcaaatctgtcctga 5497946  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |     | |||||||||||| ||||||| ||||||||||| ||||||||||||||  ||||||||| ||||||    
T  5497945 cctctttgcctgtctatgcaatttccttcttcaaagctccatcaggtataatctcctctattgaatatttgtt 5497873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 507
Target Start/End: Original strand, 32352493 - 32352665
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| ||| |||| || |||||| |||| |||||  ||||| |||  || || |||| |||||||||| | || ||||||||||||||||    
T  32352493 tgggaacctattgtgaattgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttga 32352592  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |    || |||||||||||||||||||| |||||||||||  |||||||||||||  ||||||| ||||||||    
T  32352593 cctctctgcctgtctatgcactttccttcttcaaagctccagcaggtataatctcctctattgattctttgtt 32352665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 507
Target Start/End: Original strand, 48072607 - 48072779
Alignment:
Q  335 tgggagcctattgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttga 434  Q
    ||||| |||||||| |||||||| || |||||| |||| |||||  ||||| |||  || || |||| |||||||||| | || ||||||||||||||||    
T  48072607 tgggaacctattgtgaatcgtattaaatctagactgtcgggttggaatagtcggtttctctcttttggtggtcgcttggttctactcaaatctgtcttga 48072706  T
Q  435 ctgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    |    || ||||||||||| |||||||| |||||||||||  |||||||||||||  ||||||| ||||||||    
T  48072707 cctctctgcctgtctatgcgctttccttcttcaaagctccagcaggtataatctcctctattgattctttgtt 48072779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 345 - 504
Target Start/End: Original strand, 25504183 - 25504342
Alignment:
Q  345 ttgttaatcgtataaagtctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcc 444  Q
    |||| ||||||||||| |||||| |||| |||||  ||||| | | ||| || |||| ||| || ||| | |||||||||||||| |||||    |||||    
T  25504183 ttgtgaatcgtataaaatctagactgtcaggttggaatagtcgtttcctctcttttggtggccgtttggttcttctcaaatctgtgttgacctctcttcc 25504282  T
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||||  ||||||||||    
T  25504283 tgtctatgctctttctttcttcaaagctccgtcaggtataatctctacccttgaatcttt 25504342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 507
Target Start/End: Complemental strand, 20796513 - 20796447
Alignment:
Q  441 ttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||||| |||||||| || |||||||| ||||||||||||||| | ||||||||||||||    
T  20796513 ttcctgtctatgctctttccttctttaaagctccatcaggtataatctcttccattgaatctttgtt 20796447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 39431137 - 39431073
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| |||||||| || |||||||| ||||||||||||||| | ||||||||||||||    
T  39431137 cctgtctatgctctttccttatttaaagctccatcaggtataatctcttccattgaatctttgtt 39431073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 3544390 - 3544437
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  3544390 cctgtctatgccctttccttcttcaaagctccgtcaggtataatctct 3544437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 490
Target Start/End: Complemental strand, 17708909 - 17708862
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  17708909 cctgtctatgcactttccttcttcaaagctccatcaggtataatctct 17708862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 490
Target Start/End: Complemental strand, 28358746 - 28358695
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  28358746 gcttcatgtctatgctctttccttcttcaaagctccgtcaggtataatctct 28358695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 362 - 480
Target Start/End: Complemental strand, 51052813 - 51052695
Alignment:
Q  362 tctagattgtctggttgacatagtaggtacctttcctttgttggtcgcttgatacttctcaaatctgtcttgactgtgcttcctgtctatgcactttcct 461  Q
    ||||||||||||||||| || ||| ||| ||| || || | |||||| ||||| || || || || ||| ||||||  || |||||||||||||||||||    
T  51052813 tctagattgtctggttggcaaagtcggttcctatctttcggtggtcgtttgattctactaaagtccgtcctgactgctctacctgtctatgcactttcct 51052714  T
Q  462 ttttcaaagctccgtcagg 480  Q
    | |||||||||||| ||||    
T  51052713 tcttcaaagctccgacagg 51052695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 443 - 488
Target Start/End: Complemental strand, 5809432 - 5809387
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatct 488  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||    
T  5809432 cctgtctatgctctttccttcttcaaagctccgtcaggtataatct 5809387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 504
Target Start/End: Complemental strand, 3074598 - 3074534
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||| ||||||||| |||||||| |||| |||||| |||||||||||||||||  ||||||||||    
T  3074598 cttcatgtctatgccctttccttcttcagagctccatcaggtataatctctacccttgaatcttt 3074534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 443 - 507
Target Start/End: Original strand, 49264254 - 49264318
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||||||||| ||||| || || |||||||| ||||||||||||||| | ||||||||||||||    
T  49264254 cctgtctatgctctttctttctttaaagctccatcaggtataatctcttccattgaatctttgtt 49264318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 20988006 - 20987947
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||| |||||||| ||||||||||||||| |||| |||||||  |||||||||    
T  20988006 cctgtctatgctctttccttcttcaaagctccgtcatgtatcatctctatcattgaatct 20987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 490
Target Start/End: Complemental strand, 26721484 - 26721437
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  26721484 cctgtctatgcgctttccttcttcaaagctccatcaggtataatctct 26721437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 502
Target Start/End: Complemental strand, 48435001 - 48434942
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    |||||||| || ||||||||||||||||||||  |||||||||||||| | |||||||||    
T  48435001 cctgtctacgctctttcctttttcaaagctcccgcaggtataatctcttccattgaatct 48434942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 486
Target Start/End: Complemental strand, 45271095 - 45271049
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||    
T  45271095 cttcctgtctatgctctttccttcttcaaggctccgtcaggtataat 45271049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 490
Target Start/End: Original strand, 1247877 - 1247922
Alignment:
Q  445 tgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||    
T  1247877 tgtctatgctctttcctttttcaaagcttcgtcgggtataatctct 1247922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 7396010 - 7396070
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||  |||||||| ||||||||||| ||||||||||||||| |  ||||||||||    
T  7396010 ctgtctatgatctttccttcttcaaagctccatcaggtataatctcttccgttgaatcttt 7396070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 443 - 507
Target Start/End: Complemental strand, 19042974 - 19042910
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatctttgtt 507  Q
    ||||| ||||| |||||||| |||  |||||| |||||||||||||||  |||||||||||||||    
T  19042974 cctgtttatgccctttccttcttctgagctccatcaggtataatctcttttattgaatctttgtt 19042910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 13867129 - 13867176
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    ||||| ||||| |||||||| ||||| |||||||||||||||||||||    
T  13867129 cctgtatatgctctttccttcttcaaggctccgtcaggtataatctct 13867176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 33259991 - 33260050
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||||   |||||||||||    
T  33259991 cctgtctatgctctttccttcttcaaagctccctcaggtatcatcttctctattgaatct 33260050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 502
Target Start/End: Original strand, 33280150 - 33280209
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||||   |||||||||||    
T  33280150 cctgtctatgctctttccttcttcaaagctccctcaggtatcatcttctctattgaatct 33280209  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 502
Target Start/End: Complemental strand, 36099789 - 36099726
Alignment:
Q  439 gcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||  ||||  |||||||||||    
T  36099789 gcttcctgtttatgctctttcttttttcaaggctccgtcaggtatcgtctcctctattgaatct 36099726  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 483
Target Start/End: Original strand, 40562845 - 40562887
Alignment:
Q  441 ttcctgtctatgcactttcctttttcaaagctccgtcaggtat 483  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||    
T  40562845 ttcctgtctatgcgctttcttttttcaaagctctgtcaggtat 40562887  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 23450914 - 23450975
Alignment:
Q  441 ttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||| || ||  |||||||||||    
T  23450914 ttcctgtttatgctctttcttttttcaaggctccgtcaggtatcatttcctctattgaatct 23450975  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 504
Target Start/End: Original strand, 10710494 - 10710553
Alignment:
Q  444 ctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||| ||| |||| ||||||||||| ||||||||||||||| | ||||| |||||    
T  10710494 ctgtctatgcgctt-ccttcttcaaagctccatcaggtataatctcttccattgattcttt 10710553  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 504
Target Start/End: Original strand, 22191068 - 22191132
Alignment:
Q  440 cttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||||||  ||||||| |||| ||| || |||||||||||||| ||  ||||||||||    
T  22191068 cttcctgtctatgctttttccttcttcagagcaccatcaggtataatctcaacccttgaatcttt 22191132  T

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Target: scaffold0189 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 6969 - 6902
Alignment:
Q  416 cttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtat 483  Q
    |||||||||| |||||||||   ||||||||||||||| |||||||||||||||||||||||||||||    
T  6969 cttctcaaatatgtcttgacctcgcttcctgtctatgctctttcctttttcaaagctccgtcaggtat 6902  T

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Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 63562 - 63648
Alignment:
Q  416 cttctcaaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatct 502  Q
    ||||| ||||||||||||||  |||||||||| ||||| |||||||| ||||| ||| | ||||||||||||||| | |||||||||    
T  63562 cttctaaaatctgtcttgaccttgcttcctgtttatgctctttccttcttcaaggcttcttcaggtataatctcttccattgaatct 63648  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 490
Target Start/End: Complemental strand, 182966 - 182919
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctct 490  Q
    |||||||||||||||||||| ||||||||||| | |||||||||||||    
T  182966 cctgtctatgcactttccttcttcaaagctccattaggtataatctct 182919  T

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Target: scaffold0418 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 504
Target Start/End: Complemental strand, 8476 - 8394
Alignment:
Q  422 aaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    |||||||||||||||   || ||||||||||| ||||| || ||||||||||| ||||||||||| ||| |  ||||||||||    
T  8476 aaatctgtcttgacttctctacctgtctatgccctttctttcttcaaagctccatcaggtataatttcttcccttgaatcttt 8394  T

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Target: scaffold0179 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 488
Target Start/End: Complemental strand, 8383 - 8338
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatct 488  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||    
T  8383 cctgtctatgcgctttccttcttcaaagctccatcaggtataatct 8338  T

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Target: scaffold0179; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 488
Target Start/End: Complemental strand, 13317 - 13272
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatct 488  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||    
T  13317 cctgtctatgcgctttccttcttcaaagctccatcaggtataatct 13272  T

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Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 14950 - 15011
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataatctctactattgaatcttt 504  Q
    ||||||||||| |||||||| ||||||| |||  |||||||||||||| | |||||||||||    
T  14950 cctgtctatgctctttccttcttcaaagatccaccaggtataatctcttccattgaatcttt 15011  T

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Target: scaffold1809 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 447 - 495
Target Start/End: Original strand, 1093 - 1141
Alignment:
Q  447 tctatgcactttcctttttcaaagctccgtcaggtataatctctactat 495  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||| ||||    
T  1093 tctatgcactttccttcttcaaggctccatcaggtataatctcttctat 1141  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 486
Target Start/End: Complemental strand, 28625 - 28582
Alignment:
Q  443 cctgtctatgcactttcctttttcaaagctccgtcaggtataat 486  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||    
T  28625 cctgtctatgctctttccttcttcaaggctccgtcaggtataat 28582  T

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Target: scaffold0131 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 484
Target Start/End: Original strand, 3816 - 3878
Alignment:
Q  422 aaatctgtcttgactgtgcttcctgtctatgcactttcctttttcaaagctccgtcaggtata 484  Q
    |||||||||||||||   || ||||||||||| ||||| || ||||||||||| |||||||||    
T  3816 aaatctgtcttgacttctctgcctgtctatgccctttctttcttcaaagctccatcaggtata 3878  T

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