View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0547_high_52 (Length: 351)
Name: NF0547_high_52
Description: NF0547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0547_high_52 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 4067303 - 4067484
Alignment:
| Q |
29 |
agggtttaagtaacaactcctcagaaaattcttcttctactacttttgccgaagacgatgatagaatcattgaaaaaaggagaatgaaagagagaatcgt |
128 |
Q |
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| T |
4067303 |
agggtttaagtaacaactcctcagaaaattcttcttctactacttttgctgaagacgatgatagaatcattgaaaaaaggagaatgaaagagagaatcgt |
4067402 |
T |
|
| Q |
129 |
tgctggagcaaaagtcatcgttgcttgctaactttggaactctgctgtctgtttgagtagtggtgtgtacagactactaata |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
4067403 |
tgctggagcaaaagtcatcgttgcttgctaactttggaactctgctgtctgtttgagtagtggtgtgtacagactaataata |
4067484 |
T |
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