View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0547_high_85 (Length: 266)
Name: NF0547_high_85
Description: NF0547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0547_high_85 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 25 - 224
Target Start/End: Complemental strand, 19573568 - 19573369
Alignment:
| Q |
25 |
ataattctccgcaatatgaaagaacgtgctgcgtccgcaactattactgcaaccggcgaccactggtcaaatttctgattaaaaatattagtgcaaattt |
124 |
Q |
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| T |
19573568 |
ataattctccgcaatatgaaagaacgtgctgcgtccgcaactattactgcaaccggcgaccactggtcaaatttctgattaaaaatattagtgcaaattt |
19573469 |
T |
|
| Q |
125 |
agtttagtttcatggatcaatttgtctttacaatcattcaagttttacatatgtatagtaaggatcatgtttaaagttgccagtttgggagtactagatg |
224 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
19573468 |
agtttagtttcatggatcaatttgtctttacaatcatccaagttttacatatgtatagtaaggatcatgtttaaggttgccagtttgggagtactagatg |
19573369 |
T |
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