View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0547_low_123 (Length: 256)
Name: NF0547_low_123
Description: NF0547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0547_low_123 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 39280911 - 39281132
Alignment:
| Q |
1 |
attaggttttttcccaattccttccatcaaggccaacaaagaatcagtttctcttaacagatcactattggtaagataagaaactcctttctctggcata |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
39280911 |
attaggttttttcccaattccttccatcaaggccaacaaagaatcagtttctcttaacagatcactattggtaagataagaaactcctttctctggcgtc |
39281010 |
T |
|
| Q |
101 |
gtttcaccgaggaagaaaccaagagttctagaagtacacagaaggttttcaatgtattccgcgtaccatcgaacccaagaagagagttcccaagatattg |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39281011 |
gtttcaccgaggaagaaaccaagagttctagaagtacacagaaggttttcaatgtattccgcgtaccatcgaacccaagaagagagttcccaagatattg |
39281110 |
T |
|
| Q |
201 |
aacttgttttgtctctgaagtt |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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|
| T |
39281111 |
aacttgttttgtctctgaagtt |
39281132 |
T |
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