View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0547_low_99 (Length: 283)
Name: NF0547_low_99
Description: NF0547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0547_low_99 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 50 - 261
Target Start/End: Original strand, 46483831 - 46484042
Alignment:
| Q |
50 |
cattcaaccaatttaagattatcagaatctcattctcttgataatcgaagaattaagattaagaaagtttataatgaatcatagaattggaagaatagct |
149 |
Q |
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| T |
46483831 |
cattcaaccaatttaagattatcagaatctcattctcttgataatcggagaattaagattaagaaagtttataatgaatcatagaattggaagaatagct |
46483930 |
T |
|
| Q |
150 |
ttgatatttatggcgttgatgaatatctttgttcaaattgtacaactcgttctcaattcggatttagaaaagcatgaggttgttaagataaaccatcttt |
249 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
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|
| T |
46483931 |
ttgatatttatggcgttgatgaatatctttgttcaaattgtacaactcgttctcaattcggatttagaaaagcatggggttgtcaagataaaccatcttt |
46484030 |
T |
|
| Q |
250 |
agtcgtaccgcc |
261 |
Q |
| |
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|||||||||||| |
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|
| T |
46484031 |
agtcgtaccgcc |
46484042 |
T |
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