View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0548_high_26 (Length: 234)
Name: NF0548_high_26
Description: NF0548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0548_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45654578 - 45654481
Alignment:
| Q |
1 |
aaatcataaaagtttctattgtttaattgattggaaaaaggaatagattccattcctttctatttgctcnnnnnnnctctatcatattgttggagatg |
98 |
Q |
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| T |
45654578 |
aaatcataaaagtttctattgtttaattgattggaaaaaggaatagattccattcctttctatttgctccttttttctctatcatatttttggagatg |
45654481 |
T |
|
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