View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0549_high_36 (Length: 274)
Name: NF0549_high_36
Description: NF0549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0549_high_36 |
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Alignment Details
Target: chr8 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 42842238 - 42842067
Alignment:
| Q |
30 |
gttcagaaccgaaccggtgcaatgtaactataacgggttttgtgttgtttcgcaaaaccattgtcaaatatgttgccgacgatctgatatatgacttata |
129 |
Q |
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| T |
42842238 |
gttcagaaccgaaccggtgcaatgtaactataacggattttgtgttgtttcgcaaaaccattgtcaaatatgttgccgacgatctgatata-gacttata |
42842140 |
T |
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| Q |
130 |
aggaacttccacgagtgaacttttccggcgattaaaaccgccattgcttgtctttaaaaatggcacaacttaa |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42842139 |
aggaacttccacgagtgaacttttccggcgattaaaaccgccattgcttgtctttaaaaatggcacaacttaa |
42842067 |
T |
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