View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0549_high_38 (Length: 256)
Name: NF0549_high_38
Description: NF0549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0549_high_38 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 256
Target Start/End: Original strand, 16331526 - 16331779
Alignment:
| Q |
7 |
tcgaataatattactttcggtagaagaattttacgagaaataaatatagaccttttggaccatagaccccccat----gcctttagcactaaaaccaaca |
102 |
Q |
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| T |
16331526 |
tcgaataagattactttcggtagaagaattttacaagaaataaatatagaccttttggaccatagaccacccaaccaagcctttagcactaaaaccaaca |
16331625 |
T |
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| Q |
103 |
tgtaaacactcctttatttgggtatgagttaaaatttctaacttagtatcattgcctaattatccctaaaaacatgtactacgatccaaacctaagaatc |
202 |
Q |
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| T |
16331626 |
tgtaaacactcctttatttgggtatgagttaaaattactaacttagtatcattgcctaattatccctaaaaacatgtactatgatccaaacctaagaatc |
16331725 |
T |
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| Q |
203 |
taaaatttaaaaatagggtgtctgattcaacacagaaaaaggtacgtgtaggta |
256 |
Q |
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| T |
16331726 |
taaaatttaaaaatagggtgtctgattcaacacagaaaaaggtacgtgtaggta |
16331779 |
T |
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