View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0549_low_33 (Length: 357)
Name: NF0549_low_33
Description: NF0549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0549_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 109 - 347
Target Start/End: Complemental strand, 16331995 - 16331756
Alignment:
| Q |
109 |
aatattcacatttgtgaaattaattggttgtgaatagaatacagtataattttaaggaaaataaatgccatgttctataattcaagtcagtattttatcc |
208 |
Q |
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| T |
16331995 |
aatattcacatttgtgaaattaattggttgtgaatagaatacagtataattttaaggaaaataaatgccatgttctataattcaagtcagtattttatcc |
16331896 |
T |
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| Q |
209 |
aatgtaggatattttcaatactacccctctggtccaatggaagtacgtctagtggtccaattgctactcacctatcatatttatc-tatttttgtactca |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
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| T |
16331895 |
aatgtaggatattttcaatactacccctctggtccaatggaagtacgtctagtggtccaattgctactcacctatcatatttgtcttatttttgtactca |
16331796 |
T |
|
| Q |
308 |
atggagccaagctgtatacctacacgtacctttttctgtg |
347 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
16331795 |
atggagccaagctgtatacctacacgtacctttttctgtg |
16331756 |
T |
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