View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0549_low_81 (Length: 250)
Name: NF0549_low_81
Description: NF0549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0549_low_81 |
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Alignment Details
Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 49321205 - 49321257
Alignment:
| Q |
154 |
agcagagagtattaatgtgcattttattgatgctaaaatttatgcaatttttt |
206 |
Q |
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| T |
49321205 |
agcaaagagtattaatgtgcattttattgatgctaaaatttatgcaatttttt |
49321257 |
T |
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