View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0550-Insertion-2 (Length: 491)

Name: NF0550-Insertion-2
Description: NF0550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0550-Insertion-2
NF0550-Insertion-2
[»] chr2 (50 HSPs)
chr2 (5-491)||(2377200-2377683)
chr2 (361-487)||(9496017-9496148)
chr2 (361-481)||(12734857-12734982)
chr2 (408-481)||(19336945-19337018)
chr2 (362-487)||(45543074-45543203)
chr2 (416-481)||(12141701-12141766)
chr2 (362-470)||(18959079-18959192)
chr2 (369-487)||(33504374-33504498)
chr2 (370-481)||(38430041-38430157)
chr2 (417-487)||(9556430-9556500)
chr2 (361-481)||(2610745-2610870)
chr2 (361-481)||(25834835-25834960)
chr2 (361-481)||(28508835-28508960)
chr2 (360-487)||(31959672-31959804)
chr2 (361-456)||(43573130-43573230)
chr2 (361-455)||(227372-227471)
chr2 (361-455)||(3635323-3635422)
chr2 (363-485)||(8180933-8181060)
chr2 (361-487)||(12882045-12882176)
chr2 (416-487)||(33287572-33287643)
chr2 (416-487)||(37470193-37470264)
chr2 (408-487)||(42149712-42149791)
chr2 (361-486)||(8197541-8197671)
chr2 (361-486)||(8202301-8202431)
chr2 (411-481)||(39029738-39029808)
chr2 (356-444)||(9531595-9531688)
chr2 (418-487)||(26784402-26784471)
chr2 (361-453)||(30306217-30306314)
chr2 (364-481)||(45077884-45078008)
chr2 (417-470)||(45437010-45437063)
chr2 (416-472)||(32402666-32402722)
chr2 (360-395)||(17429298-17429333)
chr2 (420-487)||(21834705-21834772)
chr2 (408-487)||(23915745-23915824)
chr2 (422-481)||(26670925-26670984)
chr2 (416-470)||(6219133-6219187)
chr2 (416-478)||(37452286-37452348)
chr2 (360-481)||(38452685-38452811)
chr2 (356-409)||(4807829-4807882)
chr2 (424-481)||(11412865-11412921)
chr2 (360-409)||(12474926-12474975)
chr2 (418-487)||(19235046-19235115)
chr2 (361-398)||(42543480-42543517)
chr2 (361-409)||(12520062-12520110)
chr2 (361-409)||(17670702-17670750)
chr2 (411-491)||(23997750-23997829)
chr2 (361-393)||(25721364-25721396)
chr2 (361-409)||(38328370-38328418)
chr2 (362-453)||(39709202-39709298)
chr2 (361-409)||(41763043-41763091)
[»] chr3 (46 HSPs)
chr3 (360-487)||(45289090-45289222)
chr3 (361-487)||(49042087-49042219)
chr3 (361-487)||(48508386-48508517)
chr3 (416-487)||(49841767-49841838)
chr3 (361-491)||(53519728-53519862)
chr3 (361-487)||(54128530-54128661)
chr3 (358-486)||(15296059-15296192)
chr3 (408-481)||(36304123-36304196)
chr3 (416-487)||(39600741-39600812)
chr3 (416-478)||(29601052-29601114)
chr3 (361-481)||(12096705-12096830)
chr3 (360-456)||(40106619-40106720)
chr3 (408-468)||(40116390-40116450)
chr3 (361-476)||(52156084-52156204)
chr3 (361-455)||(5169015-5169114)
chr3 (420-487)||(19162652-19162718)
chr3 (369-487)||(19676089-19676212)
chr3 (408-487)||(40116520-40116599)
chr3 (416-487)||(50960697-50960768)
chr3 (416-481)||(19758044-19758109)
chr3 (361-449)||(45374477-45374570)
chr3 (361-481)||(52138957-52139082)
chr3 (417-465)||(38431021-38431069)
chr3 (416-484)||(39235292-39235360)
chr3 (422-466)||(44571599-44571643)
chr3 (361-487)||(45486849-45486983)
chr3 (417-481)||(50237695-50237759)
chr3 (361-455)||(2133612-2133711)
chr3 (359-469)||(11284157-11284272)
chr3 (420-487)||(30294185-30294252)
chr3 (361-455)||(38060897-38060996)
chr3 (444-487)||(46431767-46431810)
chr3 (416-463)||(55244453-55244500)
chr3 (440-486)||(26490467-26490513)
chr3 (411-481)||(35033303-35033373)
chr3 (416-470)||(37779045-37779099)
chr3 (416-481)||(19737141-19737206)
chr3 (361-398)||(23610932-23610969)
chr3 (408-481)||(29475843-29475916)
chr3 (360-409)||(31566160-31566209)
chr3 (416-457)||(39208789-39208830)
chr3 (359-395)||(27192471-27192507)
chr3 (361-409)||(39512777-39512825)
chr3 (411-487)||(42026591-42026667)
chr3 (361-409)||(50249611-50249659)
chr3 (408-488)||(52678902-52678982)
[»] chr7 (58 HSPs)
chr7 (360-487)||(40979927-40980059)
chr7 (361-470)||(36101777-36101891)
chr7 (364-487)||(28627936-28628064)
chr7 (408-487)||(38135265-38135344)
chr7 (361-482)||(27648936-27649062)
chr7 (419-481)||(28542007-28542069)
chr7 (416-470)||(37976403-37976457)
chr7 (408-480)||(1569174-1569246)
chr7 (361-487)||(9210704-9210835)
chr7 (416-487)||(21517440-21517511)
chr7 (408-487)||(36239848-36239927)
chr7 (416-465)||(5577547-5577596)
chr7 (361-481)||(11594117-11594242)
chr7 (361-481)||(27893563-27893688)
chr7 (361-481)||(43281831-43281956)
chr7 (361-481)||(45836482-45836607)
chr7 (360-475)||(33731997-33732115)
chr7 (361-487)||(42187592-42187723)
chr7 (361-455)||(2885722-2885821)
chr7 (361-451)||(28208328-28208423)
chr7 (361-491)||(32631712-32631846)
chr7 (408-487)||(36136915-36136994)
chr7 (365-466)||(42969870-42969976)
chr7 (361-481)||(12841275-12841400)
chr7 (361-481)||(22349777-22349902)
chr7 (422-487)||(24549754-24549819)
chr7 (361-481)||(29650541-29650666)
chr7 (416-481)||(35922410-35922475)
chr7 (361-481)||(39906372-39906497)
chr7 (416-487)||(12966167-12966238)
chr7 (416-487)||(14057629-14057700)
chr7 (416-487)||(14367657-14367728)
chr7 (411-470)||(21078085-21078144)
chr7 (361-491)||(38607140-38607274)
chr7 (420-487)||(45601627-45601694)
chr7 (416-482)||(5418223-5418288)
chr7 (408-486)||(26741946-26742024)
chr7 (414-487)||(28562423-28562497)
chr7 (363-409)||(46355858-46355904)
chr7 (416-470)||(47848841-47848895)
chr7 (371-456)||(47852269-47852359)
chr7 (360-481)||(48919269-48919395)
chr7 (408-485)||(2882788-2882865)
chr7 (361-398)||(20899416-20899453)
chr7 (362-395)||(30914503-30914536)
chr7 (361-481)||(31682602-31682727)
chr7 (426-487)||(32368407-32368468)
chr7 (361-481)||(37618102-37618227)
chr7 (364-409)||(39812172-39812217)
chr7 (361-409)||(5418308-5418356)
chr7 (411-487)||(22174151-22174227)
chr7 (361-409)||(31005439-31005487)
chr7 (361-409)||(31869102-31869150)
chr7 (371-470)||(33103094-33103198)
chr7 (413-481)||(35559050-35559118)
chr7 (409-488)||(40169805-40169884)
chr7 (361-409)||(43491542-43491590)
chr7 (416-487)||(44401187-44401256)
[»] chr1 (55 HSPs)
chr1 (361-487)||(41560380-41560511)
chr1 (362-487)||(29128934-29129065)
chr1 (361-487)||(8796360-8796491)
chr1 (361-487)||(11941580-11941711)
chr1 (356-487)||(38807666-38807802)
chr1 (373-481)||(36623897-36624009)
chr1 (361-467)||(4707221-4707331)
chr1 (361-481)||(25979231-25979356)
chr1 (364-487)||(52532619-52532747)
chr1 (416-487)||(27520267-27520338)
chr1 (416-487)||(40416522-40416593)
chr1 (372-465)||(19908046-19908144)
chr1 (360-481)||(49347392-49347518)
chr1 (362-487)||(52561590-52561720)
chr1 (360-481)||(52921237-52921363)
chr1 (361-481)||(1210902-1211027)
chr1 (361-481)||(30202130-30202255)
chr1 (361-481)||(37311755-37311880)
chr1 (419-479)||(10200369-10200429)
chr1 (361-448)||(28090694-28090786)
chr1 (364-487)||(42501259-42501387)
chr1 (416-480)||(43375658-43375722)
chr1 (416-487)||(3818916-3818987)
chr1 (416-487)||(7762497-7762568)
chr1 (408-487)||(9509469-9509548)
chr1 (416-483)||(29577203-29577269)
chr1 (361-487)||(32404527-32404657)
chr1 (408-487)||(39318280-39318359)
chr1 (445-487)||(8676954-8676996)
chr1 (363-467)||(37462878-37462986)
chr1 (408-477)||(52878351-52878420)
chr1 (421-481)||(4001520-4001580)
chr1 (419-479)||(6025764-6025824)
chr1 (408-463)||(6084150-6084205)
chr1 (416-463)||(13827640-13827687)
chr1 (360-438)||(21769710-21769793)
chr1 (360-462)||(25715325-25715432)
chr1 (445-487)||(8203223-8203265)
chr1 (411-481)||(8672075-8672145)
chr1 (408-486)||(9599446-9599524)
chr1 (415-481)||(10569130-10569196)
chr1 (364-481)||(39140672-39140794)
chr1 (416-481)||(990518-990583)
chr1 (408-481)||(19936617-19936690)
chr1 (361-410)||(37099762-37099811)
chr1 (361-394)||(37430420-37430453)
chr1 (359-455)||(40568408-40568509)
chr1 (416-469)||(40920589-40920642)
chr1 (361-445)||(44941776-44941865)
chr1 (360-393)||(50771554-50771587)
chr1 (362-481)||(4590533-4590657)
chr1 (361-409)||(29577486-29577534)
chr1 (411-487)||(38869033-38869109)
chr1 (361-409)||(42539212-42539260)
chr1 (361-409)||(43481798-43481846)
[»] chr8 (34 HSPs)
chr8 (361-470)||(490503-490617)
chr8 (358-467)||(29520820-29520934)
chr8 (358-487)||(45419386-45419520)
chr8 (360-487)||(35914600-35914732)
chr8 (408-468)||(43904717-43904777)
chr8 (361-487)||(2216439-2216568)
chr8 (416-487)||(30559844-30559915)
chr8 (361-481)||(11523723-11523848)
chr8 (363-469)||(16917352-16917462)
chr8 (410-487)||(17491708-17491785)
chr8 (361-481)||(25473403-25473528)
chr8 (361-466)||(31715992-31716104)
chr8 (369-481)||(45041324-45041440)
chr8 (361-487)||(5908797-5908928)
chr8 (420-487)||(33827821-33827888)
chr8 (420-487)||(35643670-35643737)
chr8 (361-470)||(23492202-23492316)
chr8 (359-468)||(44529395-44529509)
chr8 (408-481)||(36069759-36069832)
chr8 (361-481)||(36545306-36545431)
chr8 (408-481)||(38391945-38392018)
chr8 (361-481)||(42469727-42469852)
chr8 (408-487)||(16705898-16705978)
chr8 (416-487)||(28169543-28169614)
chr8 (416-486)||(9904942-9905012)
chr8 (422-484)||(35825522-35825584)
chr8 (423-476)||(12966381-12966434)
chr8 (411-484)||(27037789-27037862)
chr8 (408-481)||(35362702-35362775)
chr8 (416-481)||(41971850-41971915)
chr8 (361-428)||(1928587-1928659)
chr8 (419-487)||(10079970-10080038)
chr8 (361-409)||(14742082-14742130)
chr8 (416-456)||(42584541-42584581)
[»] chr4 (56 HSPs)
chr4 (93-230)||(36766923-36767060)
chr4 (362-487)||(26037506-26037636)
chr4 (361-477)||(55007907-55008028)
chr4 (361-481)||(31959814-31959939)
chr4 (361-465)||(34208269-34208378)
chr4 (360-476)||(48622542-48622663)
chr4 (361-480)||(25574982-25575106)
chr4 (362-481)||(26024851-26024975)
chr4 (408-480)||(27049229-27049301)
chr4 (363-478)||(55388213-55388333)
chr4 (361-487)||(35690422-35690553)
chr4 (361-487)||(37488242-37488373)
chr4 (361-455)||(39100536-39100635)
chr4 (369-487)||(39708584-39708707)
chr4 (178-233)||(54980307-54980362)
chr4 (420-486)||(31043224-31043290)
chr4 (364-481)||(31459151-31459273)
chr4 (417-487)||(45204900-45204970)
chr4 (361-481)||(1777017-1777142)
chr4 (416-481)||(30621261-30621326)
chr4 (361-481)||(52569515-52569640)
chr4 (408-481)||(56439623-56439696)
chr4 (411-486)||(42639075-42639150)
chr4 (361-455)||(47265195-47265294)
chr4 (408-487)||(49987559-49987638)
chr4 (416-487)||(51421881-51421952)
chr4 (408-470)||(53518375-53518437)
chr4 (361-481)||(8286596-8286721)
chr4 (361-481)||(21528445-21528570)
chr4 (412-481)||(55768555-55768624)
chr4 (412-481)||(55832811-55832880)
chr4 (416-468)||(26510558-26510610)
chr4 (364-487)||(37042667-37042795)
chr4 (408-463)||(5306471-5306526)
chr4 (416-487)||(21107143-21107214)
chr4 (416-463)||(31339699-31339746)
chr4 (417-487)||(40420275-40420343)
chr4 (416-487)||(47372802-47372873)
chr4 (416-487)||(53540441-53540512)
chr4 (411-481)||(21237015-21237085)
chr4 (416-470)||(41192229-41192283)
chr4 (416-481)||(47147530-47147593)
chr4 (422-487)||(28550521-28550586)
chr4 (408-481)||(34233076-34233149)
chr4 (410-455)||(41729504-41729549)
chr4 (361-394)||(48451073-48451106)
chr4 (361-410)||(56130403-56130452)
chr4 (361-409)||(436463-436511)
chr4 (361-409)||(30634106-30634154)
chr4 (416-487)||(33225895-33225964)
chr4 (361-409)||(43434158-43434206)
chr4 (416-480)||(44384988-44385052)
chr4 (361-409)||(45209205-45209253)
chr4 (361-409)||(46153942-46153990)
chr4 (361-409)||(50238615-50238663)
chr4 (361-409)||(50238701-50238749)
[»] chr5 (32 HSPs)
chr5 (408-470)||(418086-418148)
chr5 (361-481)||(13561386-13561511)
chr5 (416-488)||(9235197-9235269)
chr5 (361-487)||(11675680-11675812)
chr5 (416-487)||(14667922-14667993)
chr5 (360-481)||(3302001-3302127)
chr5 (416-486)||(12576920-12576990)
chr5 (361-481)||(2915496-2915620)
chr5 (361-481)||(29816539-29816664)
chr5 (369-481)||(38685124-38685241)
chr5 (416-480)||(17340496-17340560)
chr5 (408-487)||(6889144-6889223)
chr5 (420-487)||(14725669-14725736)
chr5 (361-447)||(18855798-18855889)
chr5 (365-481)||(1287583-1287704)
chr5 (361-481)||(4496541-4496666)
chr5 (358-470)||(43557830-43557947)
chr5 (361-487)||(5303595-5303729)
chr5 (361-456)||(32442126-32442225)
chr5 (361-409)||(36551380-36551428)
chr5 (369-455)||(5558324-5558415)
chr5 (420-487)||(23980095-23980162)
chr5 (444-487)||(28186863-28186906)
chr5 (361-431)||(38132543-38132618)
chr5 (427-470)||(41894234-41894277)
chr5 (361-395)||(9460828-9460862)
chr5 (416-481)||(35615440-35615505)
chr5 (361-409)||(408494-408542)
chr5 (361-409)||(2645224-2645272)
chr5 (359-395)||(32489294-32489330)
chr5 (433-481)||(36200886-36200934)
chr5 (361-454)||(38830504-38830601)
[»] chr6 (27 HSPs)
chr6 (361-487)||(34505-34636)
chr6 (416-487)||(9593768-9593839)
chr6 (361-455)||(12890758-12890857)
chr6 (361-481)||(34143765-34143890)
chr6 (361-481)||(34156381-34156506)
chr6 (360-467)||(9706941-9707053)
chr6 (360-487)||(31818682-31818814)
chr6 (361-471)||(3206459-3206574)
chr6 (360-470)||(5096002-5096117)
chr6 (416-486)||(24665963-24666033)
chr6 (408-481)||(14389213-14389286)
chr6 (361-481)||(28085533-28085658)
chr6 (359-455)||(34934828-34934929)
chr6 (423-487)||(43119-43183)
chr6 (417-481)||(1748006-1748070)
chr6 (416-480)||(5897615-5897679)
chr6 (408-487)||(8364707-8364786)
chr6 (417-487)||(6055832-6055902)
chr6 (364-481)||(30031413-30031535)
chr6 (411-481)||(32756078-32756148)
chr6 (408-465)||(9568872-9568929)
chr6 (420-481)||(10098958-10099019)
chr6 (361-409)||(12133902-12133950)
chr6 (422-481)||(18238210-18238270)
chr6 (363-395)||(20864835-20864867)
chr6 (418-481)||(31831920-31831984)
chr6 (361-409)||(33730199-33730247)
[»] scaffold0570 (1 HSPs)
scaffold0570 (361-481)||(948-1073)
[»] scaffold0041 (1 HSPs)
scaffold0041 (360-481)||(16735-16861)
[»] scaffold0279 (1 HSPs)
scaffold0279 (444-487)||(17690-17733)
[»] scaffold0180 (1 HSPs)
scaffold0180 (416-481)||(25503-25569)
[»] scaffold0025 (1 HSPs)
scaffold0025 (408-470)||(39487-39549)
[»] scaffold0010 (1 HSPs)
scaffold0010 (408-486)||(160376-160454)
[»] scaffold0168 (1 HSPs)
scaffold0168 (361-409)||(28889-28937)
[»] scaffold0018 (1 HSPs)
scaffold0018 (361-409)||(31702-31750)


Alignment Details
Target: chr2 (Bit Score: 469; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 5 - 491
Target Start/End: Complemental strand, 2377683 - 2377200
Alignment:
Q  5 acaaaatcttgcttcaatttcaggtaatgtctcatcatatgtactattattagtgtctgcacaagagtcttcagcctcattcatagaaagttgagatttc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||||||    
T  2377683 acaaaatcttgcttcaatttcaggtaatgtctcatcatatgtactattattagtgtctgcacga---tcttcagcctcattcatagaaagttgagatttc 2377587  T
Q  105 ttcactattacaacagattccacagttttcttccttttctgttcctcctcaagaacactcactttctcttccatttgctttaagtaccttatagcttctc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377586 ttcactattacaacagattccacagttttcttccttttctgttcctcctcaagaacactcactttctcttccatttgctttaagtaccttatagcttctc 2377487  T
Q  205 caagaacagaagctttgtccatctgtatgcagaaaactgaaaaatgagacctatatgtatatctaatgttaagtttaaaaattgacactgcattatttga 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377486 caagaacagaagctttgtccatctgtatgcagaaaactgaaaaatgagacctatatgtatatctaatgttaagtttaaaaattgacactgcattatttga 2377387  T
Q  305 acacaaatctcatctttccaaccaggtagctcagttggtaagttgagggggacactacaacaataaccaagccttatctcactaagtggggccgacgaca 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377386 acacaaatctcatctttccaaccaggtagctcagttggtaagttgagggggacactacaacaataaccaagccttatctcactaagtggggccgacgaca 2377287  T
Q  405 tggattacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtc 491  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377286 tggattacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtc 2377200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 9496148 - 9496017
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||||||| || ||||||||||||  | | ||||||||     ||||| |||||||||||||||| |||||| ||||||||||||||||    
T  9496148 acaacaacaaccaagccttgtcccactaagtggggttggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatt 9496049  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    |  |||||||||||| | |||||||| |||||    
T  9496048 aacctctaaatctttctgaatagtttctctta 9496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 12734982 - 12734857
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| |||| ||||||||     ||| | ||| |||||||||||| |||||| ||||||||||||||||    
T  12734982 acaacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactcatt 12734883  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  12734882 gacctctaaatcctttctaatggttt 12734857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 19336945 - 19337018
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||| ||||||||||||| || |||||||    
T  19336945 attacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaaatctttctttatagttt 19337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 487
Target Start/End: Original strand, 45543074 - 45543203
Alignment:
Q  362 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    |||||| || ||||| ||||| |||||||||||| || | |||| |||     ||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  45543074 caacaacaagcaagcattatcccactaagtggggtcggctacatagatcaaagtacgccataatgttctatcataaaccatatttggatcgaactcatta 45543173  T
Q  457 ttctctaaatcttttttaatagtttatctta 487  Q
      ||||||||||||| ||||||||| |||||    
T  45543174 -cctctaaatcttttctaatagtttctctta 45543203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 12141766 - 12141701
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||  |||||||||    
T  12141766 ataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagttt 12141701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 470
Target Start/End: Complemental strand, 18959192 - 18959079
Alignment:
Q  362 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    ||||||||||||||||||||| |||||||||||| |  | ||||||||     || || |||||||||||||||| |||||| || ||||||||||||||    
T  18959192 caacaataaccaagccttatcccactaagtggggtcagctacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactcatta 18959093  T
Q  457 ttctctaaatcttt 470  Q
     |||| || |||||    
T  18959092 atctccaagtcttt 18959079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 487
Target Start/End: Complemental strand, 33504498 - 33504374
Alignment:
Q  369 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt-attctct 462  Q
    |||||||||||||| |||||||||||| || | | ||||||     ||||| ||||||||||||||||||||||| ||  |||||||| ||| | |||||    
T  33504498 aaccaagccttatcccactaagtggggtcggctagatggatcaaattacgccataatgttctatcatataccatatttcaatccaacttattaaatctct 33504399  T
Q  463 aaatcttttttaatagtttatctta 487  Q
    | |||||| |||||||||| |||||    
T  33504398 agatctttcttaatagtttctctta 33504374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 481
Target Start/End: Complemental strand, 38430157 - 38430041
Alignment:
Q  370 accaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctctaa 464  Q
    |||||||||||||||||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||   ||||||    
T  38430157 accaagccttatctcactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaa 38430058  T
Q  465 atcttttttaatagttt 481  Q
    ||||||| |||| ||||    
T  38430057 atcttttctaatggttt 38430041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 9556430 - 9556500
Alignment:
Q  417 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||||| ||||||  | |||||||||||||| || ||| |||||| ||||||||||||||||    
T  9556430 taatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagtttatctta 9556500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 2610870 - 2610745
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||||||||||||||||||||||| ||   ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  2610870 acaacaacaaccaagccttatctcactaagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcatt 2610771  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  2610770 gacctctaaatcctttctaatggttt 2610745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 25834960 - 25834835
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| | | |||||||||||| |||||| ||||||||||||||||    
T  25834960 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcatt 25834861  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  25834860 gacctctaaatcctttctaatggttt 25834835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 28508960 - 28508835
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  28508960 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcatt 28508861  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  28508860 gacctctaaatcctttctaatggttt 28508835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 487
Target Start/End: Complemental strand, 31959804 - 31959672
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| ||||||||||||||  ||||||||||| |  | ||||||||     || || ||| |||||||||||| |||||| |||||||||||||||    
T  31959804 tacaacaacaaccaagccttatcctactaagtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcat 31959705  T
Q  455 tattctctaaatcttttttaatagtttatctta 487  Q
    |   ||||||||| ||| |||| |||| |||||    
T  31959704 tgacctctaaatcctttctaatggtttctctta 31959672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 456
Target Start/End: Original strand, 43573130 - 43573230
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||| |||| |||||| | |||| ||||||||||||||||    
T  43573130 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcatt 43573229  T
Q  456 a 456  Q
    |    
T  43573230 a 43573230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 455
Target Start/End: Complemental strand, 227471 - 227372
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  227471 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 227372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 3635323 - 3635422
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||| | |||||| ||||||||||||||||    
T  3635323 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 3635422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 485
Target Start/End: Complemental strand, 8181060 - 8180933
Alignment:
Q  363 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 457  Q
    ||||| ||| |||||||||| |||||||||||| || | |||||||| |     | ||||| |||||||||||| |||| | ||||||||||||||||      
T  8181060 aacaacaacgaagccttatcccactaagtggggtcggctacatggatcaaatgacactatagtgttctatcatacaccaaatttggatccaactcattga 8180961  T
Q  458 tctctaaatcttttttaatagtttatct 485  Q
     ||||||||| ||| |||| ||||||||    
T  8180960 cctctaaatcctttctaatggtttatct 8180933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 12882045 - 12882176
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| ||||||||| ||  | | ||||||||     ||||| | |||||||||||| | |||||| ||||||||||||||||    
T  12882045 acaacaacaaccaagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcatt 12882144  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    |  |||||||| |||  || |||||| |||||    
T  12882145 aacctctaaatatttcctagtagtttctctta 12882176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 33287643 - 33287572
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| |||||| || |||| ||||||||| | |||| |||||| |||||||||| |||||    
T  33287643 ataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagtttctctta 33287572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 37470193 - 37470264
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||||||| ||||| || |||||||||||||| |||||| |||| |  ||||||||| |||||    
T  37470193 ataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatagtttctctta 37470264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 42149712 - 42149791
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| |||||||||||||||| |||||| ||  ||||| |||| || |||||| |||||| |||||||||| |||||    
T  42149712 attacgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagtttctctta 42149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 486
Target Start/End: Original strand, 8197541 - 8197671
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||| ||||| |||||||| ||| || | |||||||| |     ||| ||||| |||||||||||| |||| ||  ||||||||||||    
T  8197541 acaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcatt 8197640  T
Q  456 attctctaaatcttttttaatagtttatctt 486  Q
    | ||| || |||||| |||||||||| ||||    
T  8197641 aatctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 486
Target Start/End: Original strand, 8202301 - 8202431
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||| ||||| |||||||| ||| || | |||||||| |     ||| ||||| |||||||||||| |||| ||  ||||||||||||    
T  8202301 acaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcatt 8202400  T
Q  456 attctctaaatcttttttaatagtttatctt 486  Q
    | ||| || |||||| |||||||||| ||||    
T  8202401 aatctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 39029808 - 39029738
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||| |||||||||||||| | |||||| ||||||||||||||||   ||||||||||||| |||| ||||    
T  39029808 acgccataatgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 39029738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 444
Target Start/End: Original strand, 9531595 - 9531688
Alignment:
Q  356 acactacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttgga 444  Q
    |||| ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||||||||| |||||| |||||| |||||    
T  9531595 acacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttccatcataaaccatatttgga 9531688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 487
Target Start/End: Original strand, 26784402 - 26784471
Alignment:
Q  418 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||| |||||||||||||| ||  || |||||||||| |||||| |||||| |||||||||| |||||    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagtttctctta 26784471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 30306314 - 30306217
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 453  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||    
T  30306314 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactca 30306217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 481
Target Start/End: Complemental strand, 45078008 - 45077884
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc--atta 456  Q
    |||| |||||||| |||||||||||||||||| ||   ||||||||     || || || ||||||||||||| || ||| || ||||||||||  ||||    
T  45078008 acaacaaccaagctttatctcactaagtggggtcggttacatggatcaaattatgccattatgttctatcataaactatatttcgatccaactctcatta 45077909  T
Q  457 ttctctaaatcttttttaatagttt 481  Q
     ||||||||||||| ||||||||||    
T  45077908 atctctaaatctttcttaatagttt 45077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 45437063 - 45437010
Alignment:
Q  417 taatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    ||||||||||||| |||||||| ||||||||||  ||||| |||||||||||||    
T  45437063 taatgttctatcaaataccatatttggatccaatgcattaatctctaaatcttt 45437010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 472
Target Start/End: Complemental strand, 32402722 - 32402666
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttt 472  Q
    |||||||||||||||||||| || ||  ||||||||||||| |||||| ||||||||    
T  32402722 ataatgttctatcatataccttatttctatccaactcattaatctctagatcttttt 32402666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 17429333 - 17429298
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtgggg 395  Q
    |||||||| |||||||||||||||||||||||||||    
T  17429333 tacaacaacaaccaagccttatctcactaagtgggg 17429298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 487
Target Start/End: Complemental strand, 21834772 - 21834705
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| |||| | || |||||||||||||| ||| ||||| |||  |||||||||||||||    
T  21834772 tgttctatcataaaccaaatttagatccaactcattaatctataaatatttcctaatagtttatctta 21834705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 23915745 - 23915824
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| ||| |||||||||||| |||||||||   |||| ||||||| |||||| || ||| |||||||||| |||||    
T  23915745 attacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagtttctctta 23915824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 481
Target Start/End: Complemental strand, 26670984 - 26670925
Alignment:
Q  422 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||| | |||| || | |||||||||||| ||||||||||||| ||||||||||    
T  26670984 ttctatcataaatcatattttggtccaactcattaatctctaaatctttcttaatagttt 26670925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 6219187 - 6219133
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    |||||||||||||||| |||||| || | ||||||||| || |||||||||||||    
T  6219187 ataatgttctatcataaaccatatttcggtccaactcactaatctctaaatcttt 6219133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 478
Target Start/End: Original strand, 37452286 - 37452348
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatag 478  Q
    |||||||||||||||| |||||| ||   |||||||||||| ||||||| ||||| |||||||    
T  37452286 ataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatag 37452348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 481
Target Start/End: Original strand, 38452685 - 38452811
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     || || | ||| |||| ||||||| |||| | |||||||||||||||    
T  38452685 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcgaatgacaccatagtgttttatcatacaccaaatttggatccaactcat 38452784  T
Q  455 tattctctaaatcttttttaatagttt 481  Q
    |   ||||||||| ||| |||| ||||    
T  38452785 tgacctctaaatcctttctaatggttt 38452811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 409
Target Start/End: Complemental strand, 4807882 - 4807829
Alignment:
Q  356 acactacaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    |||| ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  4807882 acacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 4807829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 11412921 - 11412865
Alignment:
Q  424 ctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||| |||||| ||||||||||||||||| ||||| |||||||  |||||||||    
T  11412921 ctatcataaaccatatttggatccaactcattaatctct-aatctttcctaatagttt 11412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 12474926 - 12474975
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  12474926 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 12474975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 487
Target Start/End: Original strand, 19235046 - 19235115
Alignment:
Q  418 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| |||||||| ||  |||||| |||||| |||||| |||||| | |||||||| |||||    
T  19235046 aatgttctatcaaataccatatttctatccaaatcattaatctctagatctttctcaatagtttctctta 19235115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 42543517 - 42543480
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccg 398  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  42543517 acaacaacaaccaagccttatcccactaagtggggccg 42543480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 12520062 - 12520110
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  12520062 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 12520110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 17670750 - 17670702
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  17670750 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 17670702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 491
Target Start/End: Complemental strand, 23997829 - 23997750
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtc 491  Q
    |||| ||| |||| ||||| | |||||| ||||||||||||||||   ||||||||||||| |||| |||| |||||||||    
T  23997829 acgccatagtgttttatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt-tcttaggtc 23997750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 393
Target Start/End: Original strand, 25721364 - 25721396
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtgg 393  Q
    |||||||||||||||||||||| ||||||||||    
T  25721364 acaacaataaccaagccttatcccactaagtgg 25721396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 38328370 - 38328418
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  38328370 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 38328418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 453
Target Start/End: Original strand, 39709202 - 39709298
Alignment:
Q  362 caacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 453  Q
    |||||| ||||||||| |||| |||||||||||| || | ||||||     ||||||| ||| ||||| |||||| |||||| || |||||||||||    
T  39709202 caacaacaaccaagccatatcccactaagtggggtcggctacatggatcaaattacgccatagtgttcaatcataaaccatattttgatccaactca 39709298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 41763043 - 41763091
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  41763043 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 41763091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 360 - 487
Target Start/End: Original strand, 45289090 - 45289222
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| ||||||||||||  | ||||||||||     || ||||||||||||||||||| |||||| |||||||||||||||    
T  45289090 tacaacaacaaccaagccttatcccactaagtggggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcat 45289189  T
Q  455 tattctctaaatcttttttaatagtttatctta 487  Q
    || |||||||||||||  ||||||||| |||||    
T  45289190 taatctctaaatctttcctaatagtttctctta 45289222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 49042219 - 49042087
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatata-ccatagttggatccaactcat 454  Q
    ||||||| |||||||||||||||||| |||||||| || | ||||||||     ||||| ||| |||||||||||| | ||||| |||||||||||||||    
T  49042219 acaacaacaaccaagccttatctcaccaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcat 49042120  T
Q  455 tattctctaaatcttttttaatagtttatctta 487  Q
    ||  ||||||||||||  ||||||||| |||||    
T  49042119 taacctctaaatctttcctaatagtttctctta 49042087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 48508517 - 48508386
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||| ||||||||||||    
T  48508517 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcatt 48508418  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
       ||||||||| ||| |||| |||| |||||    
T  48508417 gacctctaaatcctttctaatggtttctctta 48508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 49841838 - 49841767
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||||||||||||| || |||||||||||||| ||| || |||||| |||||||||| |||||    
T  49841838 ataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagtttctctta 49841767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 361 - 491
Target Start/End: Complemental strand, 53519862 - 53519728
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||||||||||||||||||||||| || | ||||||     || |||  ||| |||||||||| | ||| || ||||||||||||||||    
T  53519862 acaacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccttatttggatccaactcatt 53519763  T
Q  456 attctctaaatcttttttaatagtttatcttaggtc 491  Q
       |||||||||||||||||| |||| |||||||||    
T  53519762 gacctctaaatcttttttaatggttt-tcttaggtc 53519728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 54128661 - 54128530
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     || || |||||||||||||||| |||||| |||| |||||||||||    
T  54128661 acaacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcatt 54128562  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
       ||||||||||||  | ||||||| |||||    
T  54128561 gacctctaaatctttccttatagtttctctta 54128530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 486
Target Start/End: Complemental strand, 15296192 - 15296059
Alignment:
Q  358 actacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc 452  Q
    |||||||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | |||||||||||||  | | |||| |||||||||| ||    
T  15296192 actacaacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacaccataatgttctatccgaaatcatatttggatccaattc 15296093  T
Q  453 attattctctaaatcttttttaatagtttatctt 486  Q
    ||||  ||||||||||||  ||||||||| ||||    
T  15296092 attaacctctaaatctttcctaatagtttctctt 15296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 36304196 - 36304123
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||| ||||||| |||||||| |||||| || |||||||||||||| |||||| |||||| ||||||||||    
T  36304196 attacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 39600741 - 39600812
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||| || |||| | |||||||||||||||||  |||||||||||| |||||||||| |||||    
T  39600741 ataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatctttcttaatagtttctctta 39600812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 416 - 478
Target Start/End: Complemental strand, 29601114 - 29601052
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatag 478  Q
    |||||||||||||||| || ||| ||| ||||||||||||| ||||||||||||| |||||||    
T  29601114 ataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 12096705 - 12096830
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  12096705 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 12096804  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  12096805 gacctctaaatcctttctaatggttt 12096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 40106619 - 40106720
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||||| | || |||| |||     || |  |||||||||||||||| |||||| |||||||||||||||    
T  40106619 tacaacaacaaccaagccttatcccactaagtggggtccactacattgatcaaattatgtcataatgttctatcataaaccatatttggatccaactcat 40106718  T
Q  455 ta 456  Q
    ||    
T  40106719 ta 40106720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 468
Target Start/End: Original strand, 40116390 - 40116450
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 468  Q
    ||||||| |||||||||||||||| |||||| || | |||||||||||| |||||||||||    
T  40116390 attacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaaatct 40116450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 476
Target Start/End: Original strand, 52156084 - 52156204
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||| ||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||    
T  52156084 acaacaacaaccgagccttatcccactaagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcatt 52156183  T
Q  456 attctctaaatcttttttaat 476  Q
       ||||||||| ||| ||||    
T  52156184 gacctctaaatcctttctaat 52156204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 455
Target Start/End: Complemental strand, 5169114 - 5169015
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||| | |||||| ||||||||||||||||    
T  5169114 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 5169015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 19162652 - 19162718
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||| ||||||| ||| ||||||||||||| |||||||||||||  ||||||||| |||||    
T  19162652 tgttctatcat-taccatacttgcatccaactcattaatctctaaatctttcctaatagtttctctta 19162718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 369 - 487
Target Start/End: Original strand, 19676089 - 19676212
Alignment:
Q  369 aaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    |||||||||||||| |||||||||||| |  | |||||||| |     ||| |||||| ||||||||| | |||| |||||||||||||||||  |||||    
T  19676089 aaccaagccttatcccactaagtggggtcagctacatggatcaaatcacgccataatgctctatcatacagcatatttggatccaactcattaacctcta 19676188  T
Q  464 aatcttttttaatagtttatctta 487  Q
    ||| |||  ||||||||| |||||    
T  19676189 aatttttcctaatagtttctctta 19676212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 40116520 - 40116599
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| | |||||||||||||| |||||| || | |||||||||||| ||||||||||| |  ||||||||| |||||    
T  40116520 attacgccacaatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaatagtttctctta 40116599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 50960697 - 50960768
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||| ||||| ||| |||||| ||||||||||||||||| |||||||| ||||  ||||||||| |||||    
T  50960697 ataatggtctatgatacaccatatttggatccaactcattaatctctaaacctttcctaatagtttctctta 50960768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 19758109 - 19758044
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||| |||||| |  |||||||||||||| ||||||||| |||  |||||||||    
T  19758109 ataatgttctatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagttt 19758044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 45374477 - 45374570
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 449  Q
    ||||||| |||||||||||||| |||||||||||| |  | ||||||     ||||||| |||||||||||||  | |||||||||||||||||    
T  45374477 acaacaacaaccaagccttatcccactaagtggggtcagctacatggattaaattacgccataatgttctatccgaaaccatagttggatccaa 45374570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 52139082 - 52138957
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | ||||||||||||||||    
T  52139082 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaataacgtcatagtgttctatcatacaccaaatttggatccaactcatt 52138983  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  52138982 gacctctaaatcctttctaatggttt 52138957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 465
Target Start/End: Complemental strand, 38431069 - 38431021
Alignment:
Q  417 taatgttctatcatataccatagttggatccaactcattattctctaaa 465  Q
    ||||||||||||||| |||||| |||||||||||||||||  |||||||    
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctctaaa 38431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 39235360 - 39235292
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 484  Q
    ||||||||||||| || |||||| || ||||||||||||||   |||||||||||  ||||||||||||    
T  39235360 ataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagtttatc 39235292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 466
Target Start/End: Complemental strand, 44571643 - 44571599
Alignment:
Q  422 ttctatcatataccatagttggatccaactcattattctctaaat 466  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctctaaat 44571599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 45486849 - 45486983
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatatacca---tagttggatccaactc 452  Q
    ||||||| |||||||| ||||| ||||||||||||||| | ||||||||     || || |||||||||||||||| ||||   || |||| ||||| ||    
T  45486849 acaacaacaaccaagctttatcccactaagtggggccggctacatggatcaaattatgccataatgttctatcataaaccatattatttggttccaagtc 45486948  T
Q  453 attattctctaaatcttttttaatagtttatctta 487  Q
    |||| |||| || |||||  ||||||||| |||||    
T  45486949 attaatctcaaagtctttcataatagtttctctta 45486983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 481
Target Start/End: Original strand, 50237695 - 50237759
Alignment:
Q  417 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||||| ||| ||  |||||||||| || ||||| ||||||| ||||||||||    
T  50237695 taatgttctatcatatacaatatttctatccaactcaataatctctgaatctttcttaatagttt 50237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 2133612 - 2133711
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| |||  ||||||     || |||| ||| |||||||||||| || ||| |||||| |||||||||    
T  2133612 acaacaacaaccaagccttatcccactaagtggggtcgagtacatggatcaaatcacgccatagtgttctatcataaactatatttggattcaactcatt 2133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 469
Target Start/End: Complemental strand, 11284272 - 11284157
Alignment:
Q  359 ctacaacaataaccaagccttatctcactaagtggggccgacgacatggattac-----gctataatgttctatcatataccatagttggatccaactca 453  Q
    ||||||||| || ||||||||||||||||||| ||||  | | |||||||| |      || ||||||||| ||||||||||||| ||  ||||||||||    
T  11284272 ctacaacaacaagcaagccttatctcactaagcggggttggctacatggatcaaacgatgcaataatgttcaatcatataccatatttatatccaactca 11284173  T
Q  454 ttattctctaaatctt 469  Q
    ||| |||||| |||||    
T  11284172 ttaatctctacatctt 11284157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 30294185 - 30294252
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||| ||||||| | |||| || |||||||||||||   || ||||||||||||||||||||||||||    
T  30294185 tgttttatcataaatcatacttagatccaactcattgacctataaatcttttttaatagtttatctta 30294252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 455
Target Start/End: Complemental strand, 38060996 - 38060897
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||  |||||| |||||||||||| || | ||||||||     ||||| ||  |||||||||||| |||||| ||||||||||||||||    
T  38060996 acaacaacaaccaattcttatcccactaagtggggtcggctacatggatcaaattacgccatggtgttctatcataaaccatatttggatccaactcatt 38060897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 46431767 - 46431810
Alignment:
Q  444 atccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||    
T  46431767 atccaactcattaatctctagatcttttttaatagtttctctta 46431810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 55244500 - 55244453
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  55244500 ataatgttctatcatataccatatttctatccaactcattaatctcta 55244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 440 - 486
Target Start/End: Complemental strand, 26490513 - 26490467
Alignment:
Q  440 ttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  26490513 ttggatcaaactcattagtctctaaatcttttctaatagtttctctt 26490467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 35033373 - 35033303
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||| ||| |||||||||| | |||||| ||||||||||||||||   ||||||||||||| |||| ||||    
T  35033373 acgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 35033303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 37779099 - 37779045
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    |||||||||||||||| |||||| | ||||| | ||||||| |||||||||||||    
T  37779099 ataatgttctatcataaaccatattcggatctagctcattaatctctaaatcttt 37779045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 19737206 - 19737141
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||| ||||||| |||||| |  |||||||||||||| ||||||||| |||  |||||||||    
T  19737206 ataatgttttatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagttt 19737141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 398
Target Start/End: Original strand, 23610932 - 23610969
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccg 398  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  23610932 acaacaacaaccaagccttatcccactaagtggggccg 23610969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 29475916 - 29475843
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||| ||| | |||||||||| || ||| ||  ||||||||||||| |||||| |||||| ||||||||||    
T  29475916 attacgccatagttttctatcataaacaatatttcaatccaactcattaatctctagatctttcttaatagttt 29475843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Original strand, 31566160 - 31566209
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  31566160 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31566209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 457
Target Start/End: Complemental strand, 39208830 - 39208789
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattat 457  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  39208830 ataatgttctatcataaaccatatttggatcctactcattat 39208789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 27192507 - 27192471
Alignment:
Q  359 ctacaacaataaccaagccttatctcactaagtgggg 395  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  27192507 ctacaacaacaaccaagccttatcccactaagtgggg 27192471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 39512825 - 39512777
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  39512825 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 39512777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 42026591 - 42026667
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||| ||||||||||||||||||||||| ||  ||| ||||||||| || ||| |||  | |||||||||| |||||    
T  42026591 acgccataatgttctatcatataccatatttctatctaactcattaatccctatatcaatcttaatagtttctctta 42026667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 50249659 - 50249611
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| ||||||||| |||| |||||||||||| |||| ||||||||    
T  50249659 acaacaacaaccaagccgtatcccactaagtggggtcgactacatggat 50249611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 488
Target Start/End: Original strand, 52678902 - 52678982
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttag 488  Q
    ||||||||||||| || ||||||  | |||| ||| || ||||||||||  ||||||||||||  ||||||||| ||||||    
T  52678902 attacgctataatattatatcatgaatcatatttgaattcaactcattaacctctaaatctttcataatagtttctcttag 52678982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 360 - 487
Target Start/End: Original strand, 40979927 - 40980059
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| |||||||||||||||    
T  40979927 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcat 40980026  T
Q  455 tattctctaaatcttttttaatagtttatctta 487  Q
    |   ||||||||||||| ||||||||| |||||    
T  40980027 tgacctctaaatcttttctaatagtttctctta 40980059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 36101777 - 36101891
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| | || ||||||||     ||||  |||||||||||||||| |||||| || |||||||||||||    
T  36101777 acaacaacaaccaagccttatcccactaagtggggtcaactacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcatt 36101876  T
Q  456 attctctaaatcttt 470  Q
    | ||| |||||||||    
T  36101877 aatctataaatcttt 36101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 364 - 487
Target Start/End: Original strand, 28627936 - 28628064
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 458  Q
    |||| ||| |||||||||| |||||||||| | || | ||||||||     ||||| |||||||||||||||| |||| | ||| ||||||||||||| |    
T  28627936 acaacaactaagccttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaat 28628035  T
Q  459 ctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||  ||||||||| |||||    
T  28628036 ctctaaatctttcctaatagtttctctta 28628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 38135265 - 38135344
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| ||||| ||||||||||  ||||| || | |||||||||||| |||||||||||||||||||||||| |||||    
T  38135265 attacgccataatattctatcataacccatatttcggtccaactcattaatctctaaatcttttttaatagtttctctta 38135344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 482
Target Start/End: Complemental strand, 27649062 - 27648936
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| | | |||||||||||| |||| | ||||||||||||||||    
T  27649062 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccacagtgttctatcataaaccaaatttggatccaactcatt 27648963  T
Q  456 attctctaaatcttttttaatagttta 482  Q
       ||||||||||||| |||| |||||    
T  27648962 gacctctaaatcttttctaatggttta 27648936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 419 - 481
Target Start/End: Original strand, 28542007 - 28542069
Alignment:
Q  419 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||||||||| ||||||||||    
T  28542007 atgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagttt 28542069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 37976457 - 37976403
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  37976457 ataatgttctatcataaaccatatttggatccaactcattaatctctaaatcttt 37976403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 480
Target Start/End: Complemental strand, 1569246 - 1569174
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 480  Q
    |||||||  ||||||||||||||| |||||| || |||||||||||||| |||||| |||||| |||||||||    
T  1569246 attacgccgtaatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagtt 1569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 9210704 - 9210835
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||| |||||||||| |||||||||||| |  | ||||||||     ||||| |||||||| ||||||| |||||| ||||||||||||||||    
T  9210704 acaacaacaacgaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactcatt 9210803  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    |  |||||||| |||  ||| ||||| |||||    
T  9210804 aacctctaaatttttcctaaaagtttctctta 9210835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 21517440 - 21517511
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||| ||||||| | |||| |||||||||||| |||| ||||||||| |||||||||||||| |||||    
T  21517440 ataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatagtttctctta 21517511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 36239848 - 36239927
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| |||||||||||||||| | |||| ||||||||||||| ||| ||||||||| |||  ||||||||| |||||    
T  36239848 attacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagtttctctta 36239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 465
Target Start/End: Original strand, 5577547 - 5577596
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaa 465  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  5577547 ataatgttctatcataaaccatacttggatccaactcattagtctctaaa 5577596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 11594242 - 11594117
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  11594242 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 11594143  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  11594142 gacctctaaatcctttctaatggttt 11594117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 27893563 - 27893688
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||| ||| || | ||||| ||     || || |||||||||||||||| | |||| || | |||| ||||||    
T  27893563 acaacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcatt 27893662  T
Q  456 attctctaaatcttttttaatagttt 481  Q
    | ||||||||||||| ||||||||||    
T  27893663 aatctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 43281956 - 43281831
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||||||| || |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  43281956 acaacaacaaccaagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 43281857  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||||||| |||| ||||    
T  43281856 gacctctaaatcttttctaatggttt 43281831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 45836482 - 45836607
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||| ||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||    
T  45836482 acaacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcatt 45836581  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  45836582 gacctctaaatcctttctaatggttt 45836607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 475
Target Start/End: Complemental strand, 33732115 - 33731997
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggatta---cgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    |||||||| |||||||||||||| ||||||||||| ||| | |||||||| |    || |||||||||||||||| |||||| || ||||  ||||||||    
T  33732115 tacaacaacaaccaagccttatcccactaagtgggaccggctacatggatcaaattgccataatgttctatcataaaccatatttcgatctcactcatta 33732016  T
Q  457 ttctctaaatcttttttaa 475  Q
     ||| || |||||| ||||    
T  33732015 atctttagatctttcttaa 33731997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 42187723 - 42187592
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataa-tgttctatcatataccatagttggatccaactcat 454  Q
    ||||||| ||| |||||||||| |||||||||||| || | ||||||||     ||||| |||| |||||||||||| |||| | |||||||||||| ||    
T  42187723 acaacaacaacaaagccttatcccactaagtggggtcggctacatggatcaaattacgccataaatgttctatcataaacca-atttggatccaactaat 42187625  T
Q  455 tattctctaaatcttttttaatagtttatctta 487  Q
    || ||||||||| |||  ||||||||| |||||    
T  42187624 taatctctaaatatttcctaatagtttctctta 42187592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 2885722 - 2885821
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | ||| |||||||||||| |||||| |||| |||||||||||    
T  2885722 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccatagtgttctatcataaaccatatttgggtccaactcatt 2885821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 451
Target Start/End: Original strand, 28208328 - 28208423
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaact 451  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||||| ||||||||||||    
T  28208328 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaact 28208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 491
Target Start/End: Complemental strand, 32631846 - 32631712
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | |||| ||| |     ||| |||  ||||||||| | |||||| ||||||||||||||||    
T  32631846 acaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagcgttctatcaaaaaccatatttggatccaactcatt 32631747  T
Q  456 attctctaaatcttttttaatagtttatcttaggtc 491  Q
       ||||||||||||| |||| |||| |||||||||    
T  32631746 gacctctaaatcttttctaatggttt-tcttaggtc 32631712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 36136994 - 36136915
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||| |||||||||||||||||| |||||| |||||||||| ||||||   |||||||||||   |||||||| |||||    
T  36136994 attaccctataatgttctatcataaaccatatttggatccaattcattaacatctaaatctttccaaatagtttctctta 36136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 466
Target Start/End: Complemental strand, 42969976 - 42969870
Alignment:
Q  365 caataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattc 459  Q
    ||||||| |||||||||| |||||||||||| || | ||||||||     ||  | ||||||||| |||||| |||||| |||||||||||||||||  |    
T  42969976 caataacaaagccttatcccactaagtggggtcggctacatggatcaaattatacgataatgttcaatcataaaccatatttggatccaactcattaacc 42969877  T
Q  460 tctaaat 466  Q
    |||||||    
T  42969876 tctaaat 42969870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 12841275 - 12841400
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||| |||||||||    
T  12841275 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatacaactcatt 12841374  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  12841375 gacctctaaatcctttctaatggttt 12841400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 22349902 - 22349777
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| || ||||||||||| |||||||||||| |||| ||||||     || |||| ||| | ||||||||||||||| | |||||||||||| |||    
T  22349902 acaacaacaatcaagccttatcccactaagtggggtcgactacatggatcaaatgacgccatagtattctatcatataccaaatttggatccaacttatt 22349803  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       || |||||| |||||||| ||||    
T  22349802 gacctttaaatcctttttaatggttt 22349777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 487
Target Start/End: Original strand, 24549754 - 24549819
Alignment:
Q  422 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||| |||||||| ||  ||||||||||||| |||||| |||||| |||||||||| |||||    
T  24549754 ttctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagtttctctta 24549819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 29650666 - 29650541
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || ||||  || |||||||||| | |||||| ||||||| ||||||||    
T  29650666 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccttagtgttctatcaaaaaccatatttggatcaaactcatt 29650567  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||||||| |||| ||||    
T  29650566 gacctctaaatcttttctaatggttt 29650541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 35922475 - 35922410
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||| | |||| || ||| ||||||||||  |||||||||||| ||||||||||    
T  35922475 ataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagttt 35922410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 39906372 - 39906497
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||| |||||    
T  39906372 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaagtcatt 39906471  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  39906472 gacctctaaatcctttctaatggttt 39906497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 12966238 - 12966167
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||| | |||||||||||||| ||  |||||| |||||| ||||||||| ||| |||||||||| |||||    
T  12966238 ataatgatttatcatataccatatttctatccaaatcattaatctctaaatatttcttaatagtttctctta 12966167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 14057700 - 14057629
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||  ||||||||||||  ||||||||| |||||    
T  14057700 ataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctctta 14057629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 14367728 - 14367657
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||  ||||||||||||  ||||||||| |||||    
T  14367728 ataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctctta 14367657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 470
Target Start/End: Complemental strand, 21078144 - 21078085
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    |||| |||||||||||||||| |||| | ||||||||||||||||   ||||||||||||    
T  21078144 acgccataatgttctatcatacaccaaatttggatccaactcattgacctctaaatcttt 21078085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 491
Target Start/End: Complemental strand, 38607274 - 38607140
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||| | |||||||||| | || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  38607274 acaacaacaaccaagccttaacccactaagtggagtcggctacatggatcaaacgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 38607175  T
Q  456 attctctaaatcttttttaatagtttatcttaggtc 491  Q
       ||||||||| ||| |||| |||| |||||||||    
T  38607174 gacctctaaatcctttctaatggttt-tcttaggtc 38607140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 487
Target Start/End: Complemental strand, 45601694 - 45601627
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| | |||| || |||||||||||||| |||||| |||||| ||||| |||| |||||    
T  45601694 tgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatggtttctctta 45601627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 482
Target Start/End: Complemental strand, 5418288 - 5418223
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttta 482  Q
    |||||||||||||||| |||||| || | ||||||||||||  |||| ||||||| |||||||||||    
T  5418288 ataatgttctatcataaaccatatttcggtccaactcatta-actcttaatctttcttaatagttta 5418223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 486
Target Start/End: Original strand, 26741946 - 26742024
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    ||||||| |||||||||||||||| |||||| || | |||||||||||  | || |||| |||  ||||||||||||||    
T  26741946 attacgccataatgttctatcataaaccatatttcggtccaactcatttatttccaaatatttcctaatagtttatctt 26742024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 487
Target Start/End: Original strand, 28562423 - 28562497
Alignment:
Q  414 ctataatgttctatcatata-ccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||| ||||||| | ||||| | ||||||||||| ||| |||||||||||||  ||||||||| |||||    
T  28562423 ctataatgttatatcataaaaccatattaggatccaactcgttaatctctaaatctttcataatagtttctctta 28562497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 46355858 - 46355904
Alignment:
Q  363 aacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||| ||||||||||||||||||||||||||| || | ||||||||    
T  46355858 aacaacaaccaagccttatctcactaagtggggtcggctacatggat 46355904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 47848895 - 47848841
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    |||||||||||||||| |||||| ||||||||| ||||||| || | ||||||||    
T  47848895 ataatgttctatcataaaccatatttggatccagctcattaatccccaaatcttt 47848841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 456
Target Start/End: Complemental strand, 47852359 - 47852269
Alignment:
Q  371 ccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    |||||||||||| | |||||||||| || | ||||||||     ||||| |||||||||||| ||| |||| | |||||||||||||||||    
T  47852359 ccaagccttatccccctaagtggggtcggctacatggatcaaattacgccataatgttctatgatacaccacatttggatccaactcatta 47852269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 481
Target Start/End: Complemental strand, 48919395 - 48919269
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| || ||||||||| |||| ||||||     || |||| ||| || | ||||||| |||||| ||||||| |||||||    
T  48919395 tacaacaacaaccaagccttatcccattaagtggggtcgactacatggatcaaatgacgccatagtggtttatcataaaccatatttggatcaaactcat 48919296  T
Q  455 tattctctaaatcttttttaatagttt 481  Q
    |   ||||||||| ||| |||| ||||    
T  48919295 tgacctctaaatcatttctaatggttt 48919269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 485
Target Start/End: Original strand, 2882788 - 2882865
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatct 485  Q
    ||||||| |||||||||||||||| |||||  || |||||||||||||| | || |||  |||  |||||||||||||    
T  2882788 attacgccataatgttctatcataaaccatgtttcgatccaactcattaatttccaaaggtttcctaatagtttatct 2882865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 398
Target Start/End: Complemental strand, 20899453 - 20899416
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccg 398  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  20899453 acaacaacaaccaagccttatcccactaagtggggccg 20899416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 395
Target Start/End: Original strand, 30914503 - 30914536
Alignment:
Q  362 caacaataaccaagccttatctcactaagtgggg 395  Q
    ||||||||||||||||||||| ||||||||||||    
T  30914503 caacaataaccaagccttatcccactaagtgggg 30914536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 31682602 - 31682727
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| |  ||||||||| |||||    
T  31682602 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatatggatccaattcatt 31682701  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  31682702 gacctctaaatcctttctaatggttt 31682727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 487
Target Start/End: Original strand, 32368407 - 32368468
Alignment:
Q  426 atcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||| || ||||||||||| || ||||||||||||  ||||||| || |||||    
T  32368407 atcatataccatatttcgatccaactcactaatctctaaatcttccttaatagcttctctta 32368468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 37618227 - 37618102
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || || | ||| |||||||||||| |||| | |||||||||||| |||    
T  37618227 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaacttatt 37618128  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  37618127 gacctctaaatcctttctaatggttt 37618102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 409
Target Start/End: Complemental strand, 39812217 - 39812172
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    |||| |||||||||||||| |||||||||||||| || ||||||||    
T  39812217 acaacaaccaagccttatcccactaagtggggccaactacatggat 39812172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 5418356 - 5418308
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||| ||||| |||| ||||||||    
T  5418356 acaacaacaaccaagccttatcccactaaatggggtcgactacatggat 5418308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 22174227 - 22174151
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||| |||||||||||||| |||||||| ||  ||| || |||||| |||||| |||||| || ||||||| |||||    
T  22174227 acgccataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagtttctctta 22174151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 31005487 - 31005439
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  31005487 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31005439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 31869102 - 31869150
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  31869102 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31869150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 33103198 - 33103094
Alignment:
Q  371 ccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 465  Q
    ||||||||||||  ||||||||||| || | ||||||||     ||||||||  |||||||||||| |||||| |  ||| |||||||||| |||||||     
T  33103198 ccaagccttatcctactaagtggggtcggctacatggatcaaattacgctatggtgttctatcataaaccatattccgattcaactcattaatctctaag 33103099  T
Q  466 tcttt 470  Q
    |||||    
T  33103098 tcttt 33103094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 481
Target Start/End: Original strand, 35559050 - 35559118
Alignment:
Q  413 gctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||| |||| || | | ||||||||||||||||   ||||||||||||| |||| ||||    
T  35559050 gctataatgttctaccataaactaaatttggatccaactcattgacctctaaatcttttctaatggttt 35559118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 40169884 - 40169805
Alignment:
Q  409 ttacgctataatgttctatcatataccata-gttggatccaactcattattctctaaatcttttttaatagtttatcttag 488  Q
    ||||||| ||||||||||||||| |||||| ||||| ||||||| | || ||||| | ||||| |||||||||| ||||||    
T  40169884 ttacgctgtaatgttctatcatagaccatatgttgg-tccaactaactaatctctgagtctttcttaatagtttctcttag 40169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 43491590 - 43491542
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  43491590 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 43491542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 44401187 - 44401256
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| | |||| || |||  ||||| ||| ||||||||||||| |||||||||| |||||    
T  44401187 ataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctctta 44401256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 41560511 - 41560380
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||||||||||||||||  ||||| ||||||||||||||||    
T  41560511 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcatt 41560412  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    | ||||||||| | |  ||||||||| |||||    
T  41560411 aatctctaaatgtatcctaatagtttctctta 41560380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 362 - 487
Target Start/End: Complemental strand, 29129065 - 29128934
Alignment:
Q  362 caacaataaccaagccttatctcactaagtggggccgacgacatgg------attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    |||||| ||||||||||||||||||||||||||| || | ||||||      ||||| | |||||||||||||||| |||||| ||||||||||||  ||    
T  29129065 caacaaaaaccaagccttatctcactaagtggggtcggctacatgggatcatattacaccataatgttctatcataaaccatatttggatccaacttgtt 29128966  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    |  ||||||||||||  ||||||||| |||||    
T  29128965 aacctctaaatctttcctaatagtttctctta 29128934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 8796491 - 8796360
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||||     ||| |||||||||||||||| |||||| ||  |||||| |||||    
T  8796491 acaacaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcatt 8796392  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    | | |||| |||||| |||||||||| |||||    
T  8796391 aatatctagatctttcttaatagtttctctta 8796360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 11941580 - 11941711
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||||| |||| ||||||||| ||||||| ||||||||     ||||| |||||||| ||||||| |||||| |  ||||||||||| |    
T  11941580 acaacaacaaccaagccgtatcccactaagtgaggccgactacatggatcaaaatacgccataatgttttatcataaaccatactccgatccaactcaat 11941679  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    | |||||||||||||| |||||| || |||||    
T  11941680 aatctctaaatcttttctaatagcttctctta 11941711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 487
Target Start/End: Original strand, 38807666 - 38807802
Alignment:
Q  356 acactacaacaataaccaagccttatctcactaagtggggccgacgacatgga-----ttacgctataatgttctatcatataccatagttggatccaac 450  Q
    |||| ||||||| |||||||||||||| |||||||||||| || | |||||||     |||||| ||| |||||||||||| |||||| |||||||||||    
T  38807666 acacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaattacgccatagtgttctatcataaaccatatttggatccaac 38807765  T
Q  451 tcattattctctaaatcttttttaatagtttatctta 487  Q
    || ||   ||||||||| ||| |||| |||| |||||    
T  38807766 tcgttgacctctaaatcctttctaatggtttctctta 38807802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 481
Target Start/End: Original strand, 36623897 - 36624009
Alignment:
Q  373 aagccttatctcactaagtggggccgacgacatggat---tac-gctataatgttctatcatataccatagttggatccaactcattattctctaaatct 468  Q
    |||||||||| |||||||| ||| |||| ||||||||   ||| || ||||||||| ||| || |||||| |||||||||||||||||  ||||||||||    
T  36623897 aagccttatcccactaagtagggtcgactacatggatcattacagccataatgttcgatcctaaaccatatttggatccaactcattagcctctaaatct 36623996  T
Q  469 tttttaatagttt 481  Q
    ||| |||||||||    
T  36623997 tttctaatagttt 36624009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 467
Target Start/End: Original strand, 4707221 - 4707331
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg----attacgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||     ||||||| ||| |||||||||||| |||| | |||||||||||||||||    
T  4707221 acaacaacaaccaagccttatcccactaagtggggtcggctacatgatcaaattacgccatagtgttctatcataaaccaaatttggatccaactcatta 4707320  T
Q  457 ttctctaaatc 467  Q
      |||||||||    
T  4707321 acctctaaatc 4707331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 25979231 - 25979356
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||    
T  25979231 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcatt 25979330  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  25979331 gacctctaaatcctttctaatggttt 25979356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 364 - 487
Target Start/End: Original strand, 52532619 - 52532747
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 458  Q
    |||| ||||||||||| || |||||||||||| || | ||||| ||     ||||| |||||||||||||||| |||||| || | |||||||||||| |    
T  52532619 acaacaaccaagccttttcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaat 52532718  T
Q  459 ctctaaatcttttttaatagtttatctta 487  Q
     |||||||||||  ||||||||| |||||    
T  52532719 ttctaaatctttcctaatagtttctctta 52532747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 27520267 - 27520338
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| | |||| ||||||||| ||||||| ||||||||| |||| ||||||||| |||||    
T  27520267 ataatgttctatcataaatcatatttggatccagctcattaatctctaaattttttctaatagtttctctta 27520338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 40416593 - 40416522
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| |||||| || |||||||||||||| ||| || |||||| |||||||||| |||||    
T  40416593 ataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagtttgtctta 40416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 465
Target Start/End: Original strand, 19908046 - 19908144
Alignment:
Q  372 caagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 465  Q
    ||||||||||| |||||||||||| || | ||||||||     ||||| ||||||||| |||||| |||||| ||| ||||||||||||| ||||||||    
T  19908046 caagccttatcccactaagtggggtcggctacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcattaatctctaaa 19908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 481
Target Start/End: Original strand, 49347392 - 49347518
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||||||||    
T  49347392 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcat 49347491  T
Q  455 tattctctaaatcttttttaatagttt 481  Q
    |   ||||||||| ||| |||| ||||    
T  49347492 tgacctctaaatcctttctaatggttt 49347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 487
Target Start/End: Original strand, 52561590 - 52561720
Alignment:
Q  362 caacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    |||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||||||||||| |  | |||||| |||||||||||||||||    
T  52561590 caacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatttcgccataatgttctacccgaaaccatatttggatccaactcatta 52561689  T
Q  457 ttctctaaatcttttttaatagtttatctta 487  Q
      ||||||||||||  ||| ||||| |||||    
T  52561690 acctctaaatctttcctaacagtttctctta 52561720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 481
Target Start/End: Complemental strand, 52921363 - 52921237
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||||| |||||||||| ||||    
T  52921363 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgcaatagtgttctatcataaaccatatttggatccaattcat 52921264  T
Q  455 tattctctaaatcttttttaatagttt 481  Q
    |   ||||||||| ||| |||| ||||    
T  52921263 tgacctctaaatcctttctaatggttt 52921237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 1211027 - 1210902
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  1211027 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 1210928  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  1210927 gacctctaaatcctttctaatggttt 1210902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 30202130 - 30202255
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  30202130 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 30202229  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  30202230 gacctctaaatcctttctaatggttt 30202255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 37311755 - 37311880
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||||||| || |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  37311755 acaacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 37311854  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||||||| |||| ||||    
T  37311855 gacctctaaatcttttctaatggttt 37311880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 479
Target Start/End: Original strand, 10200369 - 10200429
Alignment:
Q  419 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagt 479  Q
    ||||||||||||| |||||| |||||||||||||||   |||||||||||||| |||||||    
T  10200369 atgttctatcataaaccatatttggatccaactcatcgatctctaaatcttttctaatagt 10200429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 448
Target Start/End: Original strand, 28090694 - 28090786
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatcca 448  Q
    ||||||| ||||||| |||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| |||||||||    
T  28090694 acaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 487
Target Start/End: Complemental strand, 42501387 - 42501259
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 458  Q
    ||||||||||| | ||||| |||||||| ||| || | ||||||||||     |||| |||||||||||||||| ||||| ||  ||||||||||||| |    
T  42501387 acaataaccaaactttatcccactaagtagggtcggctacatggattaaacgacgctgtaatgttctatcatattccatatttctatccaactcattaat 42501288  T
Q  459 ctctaaatcttttttaatagtttatctta 487  Q
    || || |||||| |||||| ||| |||||    
T  42501287 ctatagatctttcttaataatttctctta 42501259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 43375658 - 43375722
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 480  Q
    |||||||||||||||  |||||| || | |||||||||||| ||||||||||||| |||||||||    
T  43375658 ataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttcttaatagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 3818916 - 3818987
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||| |||||| |||||| ||  || |||||||||| ||||||||||||| |||||||||| |||||    
T  3818916 ataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatagtttctctta 3818987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 7762497 - 7762568
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| ||| |||||| || ||||||||||||||   |||||||||||| ||||||||| |||||    
T  7762497 ataatgttctattataaaccatatttagatccaactcattaacatctaaatcttttctaatagtttctctta 7762568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 9509548 - 9509469
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| ||||||||| |||||| |||||| |||| || |||||||||  || |||||||||  |||||||||||||||    
T  9509548 attacgccataatgttcaatcataaaccatatttggctctaactcattaggctgtaaatctttcctaatagtttatctta 9509469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 29577203 - 29577269
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttat 483  Q
    |||||||||||||||| |||||| || |||||| ||||||| |||||| |||||| ||||||||||||    
T  29577203 ataatgttctatcata-accatattttgatccagctcattaatctctagatctttcttaatagtttat 29577269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 32404527 - 32404657
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||| |||||||| |||||||||||| || | ||||||||     ||||| || ||||| ||||||| |||||  ||||||  ||||||||    
T  32404527 acaacaacaacca-gccttatcccactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcatt 32404625  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    | |||||||||||||  ||||||||| |||||    
T  32404626 aatctctaaatctttcctaatagtttctctta 32404657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 39318359 - 39318280
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||||||||   ||||||||| ||| |||| |||| |||||    
T  39318359 attacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctta 39318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 8676954 - 8676996
Alignment:
Q  445 tccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  8676954 tccaactcattaatctctaaatcttttttaatagtttctctta 8676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 467
Target Start/End: Original strand, 37462878 - 37462986
Alignment:
Q  363 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 457  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||| ||| |||||| || |||| |||||||||     
T  37462878 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatgataaaccata-tttgatcaaactcattaa 37462976  T
Q  458 tctctaaatc 467  Q
     |||||||||    
T  37462977 cctctaaatc 37462986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 52878351 - 52878420
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaata 477  Q
    ||||| |||||| ||||||||||| | | ||||||||| ||||||||||  ||||||||||||| |||||    
T  52878351 attacactataaagttctatcataaatcgtagttggattcaactcattaacctctaaatcttttataata 52878420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 481
Target Start/End: Original strand, 4001520 - 4001580
Alignment:
Q  421 gttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||||| | |||||| ||||||||||||||||   |||||||||||||||||| ||||    
T  4001520 gttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttttaatggttt 4001580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 479
Target Start/End: Complemental strand, 6025824 - 6025764
Alignment:
Q  419 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagt 479  Q
    ||||||||||| |||||||| ||  ||||||||||||| |||||| |||||||||| ||||    
T  6025824 atgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagt 6025764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 463
Target Start/End: Complemental strand, 6084205 - 6084150
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    ||||||| ||| |||||||||||| |||||| || |||||||||||||| ||||||    
T  6084205 attacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Original strand, 13827640 - 13827687
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  13827640 ataatgttctatcatataccatatttctatccaactcattaatctcta 13827687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 21769710 - 21769793
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccata 438  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||||| | ||||||    
T  21769710 tacaacaacaaccaagccttatcacactaagtggggtcggctacatggatcaaattacgccataatgttctatcacaaaccata 21769793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 462
Target Start/End: Original strand, 25715325 - 25715432
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| ||||||||| || || | ||||||     ||||||| ||||| |||||||||| |||||| || | | ||||||||    
T  25715325 tacaacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcat 25715424  T
Q  455 tattctct 462  Q
    || |||||    
T  25715425 taatctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 445 - 487
Target Start/End: Original strand, 8203223 - 8203265
Alignment:
Q  445 tccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  8203223 tccaactcattaatctctagatcttttttaatagtttctctta 8203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 8672145 - 8672075
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||| |||||||||||| |||| | ||||||||||||||||   ||||||||| ||| |||| ||||    
T  8672145 acgctatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggttt 8672075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 486
Target Start/End: Original strand, 9599446 - 9599524
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    ||||||| |||| ||||||||||| ||||||  |||||| |||||||||  |||||||| |||  ||||||||| ||||    
T  9599446 attacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagtttctctt 9599524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 481
Target Start/End: Original strand, 10569130 - 10569196
Alignment:
Q  415 tataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||||||| ||| ||  ||||| || |||| |||||| |||||| ||||||||||    
T  10569130 tataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagttt 10569196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 481
Target Start/End: Complemental strand, 39140794 - 39140672
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 458  Q
    |||| |||||||| ||||| |||||||||||| || | ||||| ||     ||||| |||||||||||||  | |||||| |||||||||||| ||||      
T  39140794 acaacaaccaagcattatcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatctgaaaccatatttggatccaactaattaac 39140695  T
Q  459 ctctaaatcttttttaatagttt 481  Q
    |||||||| |||  |||||||||    
T  39140694 ctctaaatttttcctaatagttt 39140672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 990518 - 990583
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||| ||||||  | |||||||||||||| |||||| |||| | | ||||||||    
T  990518 ataatgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagttt 990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 19936690 - 19936617
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||  ||||||||||||||  |||||| ||||||| |||||||||   |||||||||||  |||||||||    
T  19936690 attacgccgtaatgttctatcattaaccatatttggatctaactcattaacatctaaatctttcctaatagttt 19936617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 37099762 - 37099811
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatt 410  Q
    ||||||||||||||||||| || ||| ||||||||||| | |||||||||    
T  37099762 acaacaataaccaagccttttcccaccaagtggggccggctacatggatt 37099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 394
Target Start/End: Original strand, 37430420 - 37430453
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggg 394  Q
    ||||||| ||||||||||||||||||||||||||    
T  37430420 acaacaacaaccaagccttatctcactaagtggg 37430453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 455
Target Start/End: Original strand, 40568408 - 40568509
Alignment:
Q  359 ctacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 453  Q
    ||||||||| |||||||||||||| ||||||||||||  | | ||||||     ||||||| ||| | |||||||||| |||||| || | |||||||||    
T  40568408 ctacaacaacaaccaagccttatcccactaagtggggttggctacatggatcaaattacgccatagttttctatcataaaccatattttggtccaactca 40568507  T
Q  454 tt 455  Q
    ||    
T  40568508 tt 40568509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 40920589 - 40920642
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatctt 469  Q
    ||||| ||||||||||||||||| ||  ||||||||||||| |||||| |||||    
T  40920589 ataatattctatcatataccatatttctatccaactcattaatctctagatctt 40920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 44941776 - 44941865
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggat 445  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||| |||||||||||| |||| | ||||||    
T  44941776 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccaaatttggat 44941865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 393
Target Start/End: Original strand, 50771554 - 50771587
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtgg 393  Q
    |||||||| |||||||||||||||||||||||||    
T  50771554 tacaacaacaaccaagccttatctcactaagtgg 50771587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 481
Target Start/End: Original strand, 4590533 - 4590657
Alignment:
Q  362 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    |||||| |||||| ||||||| |||||||||||| || | ||||||||     ||| | ||| |||||||||| ||| ||||  |  ||||||||||| |    
T  4590533 caacaacaaccaaaccttatcccactaagtggggtcggctacatggatcaaattacaccatattgttctatcacatatcatatatctatccaactcatca 4590632  T
Q  457 ttctctaaatcttttttaatagttt 481  Q
     ||| ||||||||| ||||||||||    
T  4590633 atctataaatctttcttaatagttt 4590657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 29577534 - 29577486
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  29577534 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 29577486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 487
Target Start/End: Complemental strand, 38869109 - 38869033
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||| |||||||||||||||||||||||  |  ||||||| ||||| || ||| |||||| |||||| ||| |||||    
T  38869109 acgccataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaataatttctctta 38869033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 42539212 - 42539260
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||||||||||||||| || |||||||||||| || | ||||||||    
T  42539212 acaacaataaccaagccttttcccactaagtggggtcgtctacatggat 42539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 43481798 - 43481846
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  43481798 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 43481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 470
Target Start/End: Complemental strand, 490617 - 490503
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| || ||||||||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| |||||||||||||||     
T  490617 acaacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatc 490518  T
Q  456 attctctaaatcttt 470  Q
    | |||||||||||||    
T  490517 aatctctaaatcttt 490503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 467
Target Start/End: Complemental strand, 29520934 - 29520820
Alignment:
Q  358 actacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc 452  Q
    |||||||||| |||||||| ||||| |||||| |||||  | | ||||||||     ||||| |||||||||||||||| |||||| |||||||||||||    
T  29520934 actacaacaacaaccaagcattatcccactaaatggggtgggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactc 29520835  T
Q  453 attattctctaaatc 467  Q
    |||| ||||||||||    
T  29520834 attaatctctaaatc 29520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 487
Target Start/End: Complemental strand, 45419520 - 45419386
Alignment:
Q  358 actacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc 452  Q
    |||||||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | |||||||||||||||| |||| | ||||||| |||||    
T  45419520 actacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccaaatttggatcaaactc 45419421  T
Q  453 attattctctaaatcttttttaatagtttatctta 487  Q
    |||||  | |||| ||||  ||||||||| |||||    
T  45419420 attatgatttaaacctttcctaatagtttctctta 45419386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 487
Target Start/End: Original strand, 35914600 - 35914732
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| ||||||| ||||||||||||||||||| |  | ||||||||     ||||| |||||||||||||||| |||||| || | ||||||||||    
T  35914600 tacaacaacaaccaagtcttatctcactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactcat 35914699  T
Q  455 tattctctaaatcttttttaatagtttatctta 487  Q
    || |||  || |||||  ||||||||| |||||    
T  35914700 taatcttcaagtctttcctaatagtttctctta 35914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 468
Target Start/End: Original strand, 43904717 - 43904777
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 468  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||| |||||||||||    
T  43904717 attacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatct 43904777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 2216568 - 2216439
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    |||||||  |||||||||||||||||| ||||||| || | ||||||     ||||| |||||||||||||||||| | |||| | ||||||||||||||    
T  2216568 acaacaaccaccaagccttatctcactgagtggggtcggctacatggatcaaattacactataatgttctatcata-aacatattaggatccaactcatt 2216470  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
      |||||||||| || |||||||||| |||||    
T  2216469 gatctctaaatc-ttcttaatagtttctctta 2216439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 30559915 - 30559844
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| ||||||  |||||||||||||||| |||||||||||||  | ||||||| |||||    
T  30559915 ataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttcctgatagtttctctta 30559844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 11523723 - 11523848
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  11523723 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 11523822  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  11523823 gacctctaaatcctttctaatggttt 11523848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 469
Target Start/End: Complemental strand, 16917462 - 16917352
Alignment:
Q  363 aacaataaccaagccttatctcactaagtggggccgacgacatggatta----cgctataatgttctatcatataccatagttggatccaactcattatt 458  Q
    ||||||||||||| |||||| |||||||||||| || | |||||||| |    |  |  ||||||||||||||||||||| ||  ||||||||||||| |    
T  16917462 aacaataaccaagtcttatcccactaagtggggacggctacatggatcaaaagcagtcaaatgttctatcatataccatatttctatccaactcattaat 16917363  T
Q  459 ctctaaatctt 469  Q
    |||||||||||    
T  16917362 ctctaaatctt 16917352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 410 - 487
Target Start/End: Original strand, 17491708 - 17491785
Alignment:
Q  410 tacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||| |||||||||||||||| |||||| || | |||||||||||| |||| || ||||| |||||||||| |||||    
T  17491708 tacgccataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatagtttctctta 17491785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 25473403 - 25473528
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||||||| |||||||||||| |||| | ||||||| ||||||||    
T  25473403 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgctatagtgttctatcatacaccaaatttggatcaaactcatt 25473502  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  25473503 gacctctaaatcctttctaatggttt 25473528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 466
Target Start/End: Complemental strand, 31716104 - 31715992
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacg--acatggat-----tacgctataatgttctatcatataccatagttggatccaactca 453  Q
    ||||||| |||||||||||||| |||||||||| |  ||||  ||||||||     ||||| ||||||||||||| || |||||| |||||||||||| |    
T  31716104 acaacaacaaccaagccttatcccactaagtggtggtgacgctacatggatcaaattacgccataatgttctatcttaaaccatatttggatccaactaa 31716005  T
Q  454 ttattctctaaat 466  Q
    ||| |||||||||    
T  31716004 ttaatctctaaat 31715992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 45041324 - 45041440
Alignment:
Q  369 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    |||||||||||||| |||||||||||| |  | ||||||||     ||||| ||||||  |||||||| |||||| |||||||||||||||||  |||||    
T  45041324 aaccaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgcgctatcataaaccata-ttggatccaactcattaacctcta 45041422  T
Q  464 aatcttttttaatagttt 481  Q
    |||||||  |||||||||    
T  45041423 aatctttcctaatagttt 45041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 5908928 - 5908797
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||  |||||| |||| || || ||||||||     ||||| |||| ||||||||||| | |||| || |||||||||||||    
T  5908928 acaacaacaaccaagccttattccactaattgggtccaactacatggatccaattacgcaataaggttctatcataaatcatattttgatccaactcatt 5908829  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    | ||  |  ||||||||||||||||| |||||    
T  5908828 aatccttggatcttttttaatagtttctctta 5908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 33827821 - 33827888
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| |||||| || ||||||| |||||| ||| ||||| |||||||||||||| |||||    
T  33827821 tgttctatcataaaccatatttagatccaattcattaatctataaatattttttaatagtttctctta 33827888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 35643670 - 35643737
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| |||||| || |||||||||||||| |||||| |||||| |||||| ||| |||||    
T  35643670 tgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaataatttctctta 35643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 470
Target Start/End: Complemental strand, 23492316 - 23492202
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatt-----acgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| || |||||||||||||||||||||||| || | |||||||||     || | ||| |||||||||||||| |||| ||  ||||||||||||    
T  23492316 acaacaacaaacaagccttatctcactaagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcatt 23492217  T
Q  456 attctctaaatcttt 470  Q
    | || ||| ||||||    
T  23492216 aatcgctacatcttt 23492202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 468
Target Start/End: Complemental strand, 44529509 - 44529395
Alignment:
Q  359 ctacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 453  Q
    ||||||||| |||||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||||||    
T  44529509 ctacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcataaaccaaatttggatccaactca 44529410  T
Q  454 ttattctctaaatct 468  Q
    ||   ||||||||||    
T  44529409 ttgacctctaaatct 44529395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 36069832 - 36069759
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||  ||||||||||||||| |||||| ||  | ||||||||||| ||||||||| ||| ||||||||||    
T  36069832 attacgccgtaatgttctatcataaaccatatttctacccaactcattaatctctaaatatttgttaatagttt 36069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 36545431 - 36545306
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | ||||||||||||||||    
T  36545431 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcatt 36545332  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  36545331 gacctctaaatcctttctaatggttt 36545306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 38391945 - 38392018
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||| ||||| ||||||||||||||||| || ||||| |||||||| ||| || |||||| ||||| ||||    
T  38391945 attacgccataatattctatcatataccatatttcgatcccactcattaatctgtagatctttcttaatggttt 38392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 42469727 - 42469852
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| || ||||||||| |  | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  42469727 acaacaacaaccaagccttatcccaataagtggggtcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 42469826  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||||||| |||| ||||    
T  42469827 gacctctaaatcttttctaatggttt 42469852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 16705978 - 16705898
Alignment:
Q  408 attacgctataatgttctatc-atataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| ||||||||| ||| |||||||||| || |||||||||||||| ||||||  | ||| |||||||||| |||||    
T  16705978 attacgccataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagtttctctta 16705898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 28169614 - 28169543
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||| || ||||||| |||||| ||| ||||||||||||| |||| ||||||||  ||||||||| |||||    
T  28169614 ataatattttatcataaaccatatttgaatccaactcattaatctcaaaatctttcctaatagtttctctta 28169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 486
Target Start/End: Original strand, 9904942 - 9905012
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    |||||||| ||||||| ||| || || ||||||| |||||| | ||||||||||| |||||||||| ||||    
T  9904942 ataatgttttatcataaaccttattttgatccaaatcattaatttctaaatctttattaatagtttctctt 9905012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 484
Target Start/End: Original strand, 35825522 - 35825584
Alignment:
Q  422 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 484  Q
    |||||||||| || ||| || | | |||||||||| |||||||||||||| ||||||||||||    
T  35825522 ttctatcataaacaatattttggttcaactcattagtctctaaatcttttctaatagtttatc 35825584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 476
Target Start/End: Original strand, 12966381 - 12966434
Alignment:
Q  423 tctatcatataccatagttggatccaactcattattctctaaatcttttttaat 476  Q
    ||||||||| |||||| ||| || |||||||||| ||||||||||||| |||||    
T  12966381 tctatcataaaccatatttgaattcaactcattaatctctaaatctttcttaat 12966434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 27037862 - 27037789
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 484  Q
    |||| ||||| |||||||| |||||||| ||  ||||||||||||| ||| || ||||||  ||||||||||||    
T  27037862 acgccataatattctatcaaataccatatttctatccaactcattaatctttatatctttcctaatagtttatc 27037789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 35362702 - 35362775
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||| |||||||||||||||| |||||| ||   |||||||||||| | || ||||||||  |||||||||    
T  35362702 attacgccataatgttctatcatacaccatatttcagtccaactcattaatttccaaatctttcctaatagttt 35362775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 41971850 - 41971915
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||| || ||| ||   |||||||||||| ||||||||||||| ||| ||||||    
T  41971850 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 41971915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 428
Target Start/End: Original strand, 1928587 - 1928659
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatc 428  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| |||||||||||||    
T  1928587 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatc 1928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 487
Target Start/End: Original strand, 10079970 - 10080038
Alignment:
Q  419 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||| ||| |||| ||  ||||||||||||| |||||| |||||| |||| ||||| |||||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttctta 10080038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 14742082 - 14742130
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  14742082 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 14742130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 42584581 - 42584541
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcatta 456  Q
    |||||||||||||||| |||||| |||||||||| ||||||    
T  42584581 ataatgttctatcataaaccatatttggatccaaatcatta 42584541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 36766923 - 36767060
Alignment:
Q  93 agttgagatttcttcactattacaacagattccacagttttcttccttttctgttcctcctcaagaacactcactttctcttccatttgctttaagtacc 192  Q
    |||||| |||||||||| |  || ||| |||||||  |||||||| | ||||||||||||||||||||  |||| ||||||| || || ||| ||||||     
T  36766923 agttgatatttcttcacaaccaccacaaattccacgtttttcttcatgttctgttcctcctcaagaaccttcaccttctcttgcaatttcttcaagtact 36767022  T
Q  193 ttatagcttctccaagaacagaagctttgtccatctgt 230  Q
    | ||||| ||||||||||||| | ||||||||||||||    
T  36767023 tgatagcatctccaagaacagtaactttgtccatctgt 36767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 487
Target Start/End: Original strand, 26037506 - 26037636
Alignment:
Q  362 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    |||||| |||||| ||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||||||||||||||||     
T  26037506 caacaacaaccaaaccttatcccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattc 26037605  T
Q  457 ttctctaaatcttttttaatagtttatctta 487  Q
      ||||||||||||  ||||||||| |||||    
T  26037606 acctctaaatctttcctaatagtttctctta 26037636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 477
Target Start/End: Complemental strand, 55008028 - 55007907
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||  |||||| ||||||||| |||||| || | |||||||||||    
T  55008028 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcatt 55007929  T
Q  456 attctctaaatcttttttaata 477  Q
    | ||||||||||||| ||||||    
T  55007928 aatctctaaatctttcttaata 55007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 31959814 - 31959939
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||    
T  31959814 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 31959913  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||||||||    
T  31959914 gacctctaaatcctttctaatagttt 31959939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 465
Target Start/End: Original strand, 34208269 - 34208378
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| || |||| |||| |||  |||||||| |     ||| |||||||||||||||| |||||| ||||||||||||||||    
T  34208269 acaacaacaaccaagccttatcccaataaggggggtcgagtacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcatt 34208368  T
Q  456 attctctaaa 465  Q
    | ||||||||    
T  34208369 aatctctaaa 34208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 476
Target Start/End: Original strand, 48622542 - 48622663
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggatt-----acgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||||| || | |||||||||     |||| ||| |||||||||||| |||| | ||||||| |||||||    
T  48622542 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggattaaatgacgccatagtgttctatcatacaccaaatttggatcaaactcat 48622641  T
Q  455 tattctctaaatcttttttaat 476  Q
    |   ||||||||||||| ||||    
T  48622642 tgacctctaaatcttttctaat 48622663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 480
Target Start/End: Complemental strand, 25575106 - 25574982
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||| ||||| |  | ||||||||     ||| | | |||||||||||||| |||||| || |||||||||||||    
T  25575106 acaacaacaaccaagccttatcccactaaatggggtctgctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcatt 25575007  T
Q  456 attctctaaatcttttttaatagtt 480  Q
    | |||||| |||||| |||||||||    
T  25575006 aatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 362 - 481
Target Start/End: Original strand, 26024851 - 26024975
Alignment:
Q  362 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 456  Q
    |||||| |||||||||||||| ||||||||| || || | ||||||||     ||| | |||||||||||||||| |||||   | ||||||||||||||    
T  26024851 caacaacaaccaagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcatta 26024950  T
Q  457 ttctctaaatcttttttaatagttt 481  Q
     |||||| |||||| ||||||||||    
T  26024951 atctctagatctttcttaatagttt 26024975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 480
Target Start/End: Original strand, 27049229 - 27049301
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 480  Q
    ||||||| ||||||||| |||||| |||||| ||||| ||||||||||| ||| ||||||||| |||||||||    
T  27049229 attacgccataatgttcgatcataaaccatatttggaaccaactcattaatctataaatctttcttaatagtt 27049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 478
Target Start/End: Original strand, 55388213 - 55388333
Alignment:
Q  363 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 457  Q
    ||||| |||||||||||||| |||||||||||| |||| ||||||     ||||| | | |||||||||||||| | |||| || |||| |||||||||     
T  55388213 aacaacaaccaagccttatcccactaagtggggtcgacaacatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcattaa 55388312  T
Q  458 tctctaaatcttttttaatag 478  Q
    |||| |||||||| |||||||    
T  55388313 tctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 35690553 - 35690422
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||| |||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| ||| |  ||||||| ||||||||    
T  35690553 acaacaaaaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccctgattggatcaaactcatt 35690454  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    |  |||||||| |||  ||||||||| |||||    
T  35690453 aacctctaaatttttcgtaatagtttctctta 35690422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 37488373 - 37488242
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| ||||||||||||| | | ||||||     ||||||| |||||| ||||||||  |||||| || |||| |||| |||    
T  37488373 acaacaacaaccaagccttatcccactaagtggggctggctacatggatcaaattacgccataatgctctatcattaaccatattttgatcaaacttatt 37488274  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    | | |||| |||||| |||||||||| |||||    
T  37488273 aatttctagatctttcttaatagtttctctta 37488242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 39100536 - 39100635
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||| ||| || ||| ||||||||||||||||    
T  39100536 acaacaacaaccaagccttatcccactaagtggggtcggctacatggattatattacgccataatgttctatgataaacaatatttggatccaactcatt 39100635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 487
Target Start/End: Complemental strand, 39708707 - 39708584
Alignment:
Q  369 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    ||||||| |||||| |||||||||||| |||| ||||||||     ||||  ||| |||||||||||| |||||| ||||||||||||||||   |||||    
T  39708707 aaccaagtcttatcccactaagtggggtcgactacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctcta 39708608  T
Q  464 aatcttttttaatagtttatctta 487  Q
    |||| ||| |||| |||| |||||    
T  39708607 aatcctttctaatggtttctctta 39708584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 54980362 - 54980307
Alignment:
Q  178 tttgctttaagtaccttatagcttctccaagaacagaagctttgtccatctgtatg 233  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  54980362 tttgcttcaagtaccttatatcttctccaagaacagaagctttatccatttgtatg 54980307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 420 - 486
Target Start/End: Complemental strand, 31043290 - 31043224
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    |||||||||| | |||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||    
T  31043290 tgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctctt 31043224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 481
Target Start/End: Complemental strand, 31459273 - 31459151
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 458  Q
    |||| |||||||||||||| |||||||||||| ||   |||||||| |     ||| ||||||||| |||| | |||||| | ||||||||||||||| |    
T  31459273 acaacaaccaagccttatcccactaagtggggtcgggtacatggatcaagttccgccataatgttcaatcacacaccatattgggatccaactcattaat 31459174  T
Q  459 ctctaaatcttttttaatagttt 481  Q
    ||||||||||||  |||||||||    
T  31459173 ctctaaatctttcctaatagttt 31459151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 45204900 - 45204970
Alignment:
Q  417 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||||| |||||| |||||||||||| ||||  ||||||||||||  ||||||||| |||||    
T  45204900 taatgttctatcataaaccatatttggatccaacttattaaactctaaatctttcctaatagtttctctta 45204970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 1777017 - 1777142
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| || ||||||||| || | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||    
T  1777017 acaacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaactcatt 1777116  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||||||| |||| ||||    
T  1777117 gacctctaaatcttttctaatggttt 1777142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 30621261 - 30621326
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||| |||||| || | |||||| ||||| ||||||||||||| ||||||||||    
T  30621261 ataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagttt 30621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 52569515 - 52569640
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  52569515 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 52569614  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  52569615 gacctctaaatcctttctaatggttt 52569640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 56439623 - 56439696
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||||||||||| |||||| || ||||||||| |||| | || ||||||||  |||||||||    
T  56439623 attacgctataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagttt 56439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 42639075 - 42639150
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    |||| |||||||||||||| |||||||| ||  ||||||||||||| || ||| |||||| |||||||||| ||||    
T  42639075 acgccataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagtttctctt 42639150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 47265195 - 47265294
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    |||||||||||||||||||||| ||||||||| || || | ||||||     ||||| ||||| |||||||||||| | || | ||||||||||||||||    
T  47265195 acaacaataaccaagccttatcccactaagtgaggtcggctacatggatcaaattacactatagtgttctatcatagatcaaatttggatccaactcatt 47265294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 49987638 - 49987559
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| |||||| ||||||||  |||||||||||||||| ||||||  |||| || ||||| |||||||||| |||||    
T  49987638 attacgccataatgctctatcatgaaccatagttggatccatctcatttatctccaagtctttcttaatagtttctctta 49987559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 51421952 - 51421881
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| |||||  |||||||||| ||||||  ||||||||||||  ||||||||| |||||    
T  51421952 ataatgttctatcataaaccatttttggatccaattcattaacctctaaatctttcctaatagtttctctta 51421881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 53518375 - 53518437
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    ||||||| ||| |||||||||||| |||||| || ||||||||||||||  ||||||||||||    
T  53518375 attacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaatcttt 53518437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 8286721 - 8286596
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | ||||||||||||||||    
T  8286721 acaacaacaaccaagccttatcccactaagtgggggcggctacatggatcaaatgacgtcatagtgttctatcataaaccaaatttggatccaactcatt 8286622  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  8286621 gacctctaaatcctttctaatggttt 8286596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 21528570 - 21528445
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||| |     | | ||| |||||||||| | |||||| ||| ||||||||||||    
T  21528570 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcatt 21528471  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||||||| |||| ||||    
T  21528470 gacctctaaatcttttctaatggttt 21528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 55768555 - 55768624
Alignment:
Q  412 cgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||||||| |||||| || |||||||||||||  ||| ||| ||||| |||| |||||    
T  55768555 cgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagttt 55768624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 55832811 - 55832880
Alignment:
Q  412 cgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||||||| |||||| || |||||||||||||  ||| ||| ||||| |||| |||||    
T  55832811 cgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagttt 55832880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 26510610 - 26510558
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatct 468  Q
    |||||||||||||  | |||||| ||||||||||||||||| |||||||||||    
T  26510610 ataatgttctatcgcaaaccatatttggatccaactcattaatctctaaatct 26510558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 487
Target Start/End: Original strand, 37042667 - 37042795
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 458  Q
    |||| |||||||||||||| |||||||| ||| || | |||||||| |     | | |||||||||||||| ||||| || ||  |||||||||| || |    
T  37042667 acaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaacgacaccataatgttctatcaaataccgtatttctatccaactcaataat 37042766  T
Q  459 ctctaaatcttttttaatagtttatctta 487  Q
    ||||| |||||| |||||||||| |||||    
T  37042767 ctctagatctttcttaatagtttctctta 37042795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 463
Target Start/End: Complemental strand, 5306526 - 5306471
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    ||||||| |||||||| | ||||| |||||| ||||||||||||||||| ||||||    
T  5306526 attacgccataatgttatgtcataaaccatatttggatccaactcattaatctcta 5306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 21107214 - 21107143
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||| ||||||||||| |||||| |||||||||||| |||| || ||||| ||||  ||||||||| |||||    
T  21107214 ataaagttctatcataaaccatatttggatccaactaattaatcactaaaactttcctaatagtttctctta 21107143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 31339746 - 31339699
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    ||||||||||||||| ||||||| || |||||||||||||| ||||||    
T  31339746 ataatgttctatcatgtaccatatttcgatccaactcattaatctcta 31339699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 40420275 - 40420343
Alignment:
Q  417 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||||| |||||| | |||| |||||||||| |||||  || |||||||||||||| |||||    
T  40420275 taatgttctatcataaaccatattaggattcaactcattaatctct--attttttttaatagtttctctta 40420343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 47372873 - 47372802
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| |||||||||| ||  ||||||||||||| |||||  |||||| ||| |||||| |||||    
T  47372873 ataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtagtttctctta 47372802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 53540512 - 53540441
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| |||||| ||   |||||||||||| |||| || |||||  |||||||||||||||    
T  53540512 ataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagtttatctta 53540441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 21237085 - 21237015
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||| ||| ||||||||||||||||| | ||||||||||||||||   ||||||||| ||| |||| ||||    
T  21237085 acgccatagtgttctatcatataccaaatttggatccaactcattgacctctaaatcctttctaatggttt 21237015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 41192283 - 41192229
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    ||||||||||| ||||||||||| ||  ||||||||||||| |||||| ||||||    
T  41192283 ataatgttctaccatataccatatttctatccaactcattaatctctagatcttt 41192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 47147593 - 47147530
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||||| ||||  |  ||||||||||||| |||||| |||||| ||||||||||    
T  47147593 ataatgttctatcatatatcatatct--atccaactcattaatctctagatctttcttaatagttt 47147530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 487
Target Start/End: Original strand, 28550521 - 28550586
Alignment:
Q  422 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||| | |||||| ||||||| |||||||||  ||||||||||||  ||||||||| |||||    
T  28550521 ttctatcaaaaaccatatttggatcaaactcattaacctctaaatctttcctaatagtttctctta 28550586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 34233076 - 34233149
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    ||||||||| |||||||||||||| ||| || || |||| ||||||||| ||||||  ||||| | ||||||||    
T  34233076 attacgctacaatgttctatcataaaccttattttgatctaactcattaatctctaggtctttatgaatagttt 34233149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 41729504 - 41729549
Alignment:
Q  410 tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  41729504 tacgccatagtgttctatcataaaccatatttggatccaactcatt 41729549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 394
Target Start/End: Original strand, 48451073 - 48451106
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggg 394  Q
    ||||||| ||||||||||||||||||||||||||    
T  48451073 acaacaacaaccaagccttatctcactaagtggg 48451106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 56130452 - 56130403
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatt 410  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||||    
T  56130452 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatt 56130403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 436511 - 436463
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  436511 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 436463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 30634106 - 30634154
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  30634106 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 30634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 33225895 - 33225964
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| | |||| || |||  ||||| ||| ||||||||||||| |||||||||| |||||    
T  33225895 ataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctctta 33225964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 43434206 - 43434158
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||  |||| ||||||||    
T  43434206 acaacaacaaccaagccttatcccactaagtgggctcgactacatggat 43434158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 480
Target Start/End: Complemental strand, 44385052 - 44384988
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 480  Q
    |||||||||||||||| |||||| |   |||||||| |||| |||||| |||||| |||||||||    
T  44385052 ataatgttctatcataaaccatattaatatccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 45209205 - 45209253
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  45209205 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 45209253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 46153990 - 46153942
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  46153990 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 46153942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 50238615 - 50238663
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  50238615 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 50238663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 50238701 - 50238749
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  50238701 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 50238749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 470
Target Start/End: Original strand, 418086 - 418148
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    ||||||| |||||||||||||||| |||| | ||||||||||||||||| |||||||||||||    
T  418086 attacgccataatgttctatcataaaccacatttggatccaactcattaatctctaaatcttt 418148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 13561386 - 13561511
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| || ||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||||||||||||||||||||    
T  13561386 acaacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcatt 13561485  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||||||| |||| ||||    
T  13561486 gacctctaaatcttttctaatggttt 13561511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 9235269 - 9235197
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttag 488  Q
    |||||||||||||||| |||||| || |||||| ||||||| |||||| |||||| |||||||||| ||||||    
T  9235269 ataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagtttctcttag 9235197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 11675812 - 11675680
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagtt-ggatccaactcat 454  Q
    ||||||| ||||||||||||||  ||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| ||   |||||||||||    
T  11675812 acaacaacaaccaagccttatccaactaagtggggtcggctacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactcat 11675713  T
Q  455 tattctctaaatcttttttaatagtttatctta 487  Q
    || ||||||||||| |  ||||||||| |||||    
T  11675712 taatctctaaatctgtcctaatagtttctctta 11675680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 14667993 - 14667922
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||| |||||| ||| ||| || |||||    
T  14667993 ataatgttctatcataaaccatacttggatccaactcattaatctctagatctttcttagtagcttctctta 14667922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 481
Target Start/End: Complemental strand, 3302127 - 3302001
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||||| || | |||||||| |     |||  || |||||||||| | |||||| |||||||||||||||    
T  3302127 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcat 3302028  T
Q  455 tattctctaaatcttttttaatagttt 481  Q
    |   ||||||||||||| |||| ||||    
T  3302027 tgacctctaaatcttttataatggttt 3302001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 416 - 486
Target Start/End: Original strand, 12576920 - 12576990
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    |||||| |||||||||||||||| ||  || |||||||||| |||||| |||||| |||||||||||||||    
T  12576920 ataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatagtttatctt 12576990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 2915496 - 2915620
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    |||||||||||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  2915496 acaacaataaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata-accaaatttggatccaactcatt 2915594  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  2915595 gacctctaaatcctttctaatggttt 2915620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 29816664 - 29816539
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  29816664 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 29816565  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  29816564 gacctctaaatcctttctaatggttt 29816539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 38685241 - 38685124
Alignment:
Q  369 aaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctcta 463  Q
    |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||   |||||    
T  38685241 aaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctcta 38685142  T
Q  464 aatcttttttaatagttt 481  Q
    |||| ||| |||| ||||    
T  38685141 aatcctttctaatggttt 38685124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 17340496 - 17340560
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 480  Q
    |||||||| ||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||    
T  17340496 ataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaatagtt 17340560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 6889223 - 6889144
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| |||||||||||||||| |||||| || |  |||||| |||| |||||||||||||  ||||||||| |||||    
T  6889223 attacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagtttctctta 6889144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 487
Target Start/End: Complemental strand, 14725736 - 14725669
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||| |||||| |||||| || ||||||||||||||  || |||||||||| |||||||||||||||    
T  14725736 tgttcgatcataaaccatattttgatccaactcattaacctttaaatcttttataatagtttatctta 14725669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 447
Target Start/End: Complemental strand, 18855889 - 18855798
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatcc 447  Q
    ||||||| ||||||| |||||| |||||||||||| || | ||||||||     || ||||||||||||||||||| |||||| ||||||||    
T  18855889 acaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattatgctataatgttctatcataaaccatatttggatcc 18855798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 481
Target Start/End: Original strand, 1287583 - 1287704
Alignment:
Q  365 caataaccaagccttatctcactaagtggggccgacgacatgga-----ttacgctataatgttctatcatataccatagttggatccaactcattattc 459  Q
    |||||||||||||||||| |||||||||||| || | |||||||     | |||| ||| ||| |||||||| |||| | ||||||||||||||||   |    
T  1287583 caataaccaagccttatcccactaagtggggtcggctacatggatcaactgacgccatagtgtactatcatacaccaaatttggatccaactcattgacc 1287682  T
Q  460 tctaaatcttttttaatagttt 481  Q
    |||||||| ||| |||| ||||    
T  1287683 tctaaatcctttctaatggttt 1287704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 4496666 - 4496541
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||||||||    
T  4496666 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggatccaactcatt 4496567  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  4496566 gacctctaaatcctttctaatggttt 4496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 470
Target Start/End: Original strand, 43557830 - 43557947
Alignment:
Q  358 actacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc 452  Q
    |||||||||| ||||| |||||||| |||||||||||| || | |||| |||     || |  |||||||||||||||| |||||| || ||||||||||    
T  43557830 actacaacaacaaccaggccttatcccactaagtggggtcggctacatagatcaacttaagtcataatgttctatcataaaccatatttcgatccaactc 43557929  T
Q  453 attattctctaaatcttt 470  Q
    | || |||| ||||||||    
T  43557930 aataatctccaaatcttt 43557947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 5303729 - 5303595
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta------cgctataatgttctatcatataccatag--ttggatccaactc 452  Q
    ||||||| ||||| | |||||| |||||||||||  || | ||||||||||      ||| ||||| |||||||||||||||||   ||  |||||||||    
T  5303729 acaacaacaaccaggacttatcccactaagtgggatcggctacatggattaaaacaacgccataatattctatcatataccatatatttctatccaactc 5303630  T
Q  453 attattctctaaatcttttttaatagtttatctta 487  Q
    ||||  |||||||||||||| |||||||| |||||    
T  5303629 attaaactctaaatctttttcaatagtttctctta 5303595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 456
Target Start/End: Original strand, 32442126 - 32442225
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||||||||||| |||||| |||||||||| | || | ||||||     ||||||| |||||||||||||  | |||||| ||||||||||||||||    
T  32442126 acaacaataaccaag-cttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatccaaaaccatatttggatccaactcatt 32442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 36551428 - 36551380
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| ||||||||||||||||||||||||||| || | ||||||||    
T  36551428 acaacaacaaccaagccttatctcactaagtggggtcggctacatggat 36551380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 455
Target Start/End: Complemental strand, 5558415 - 5558324
Alignment:
Q  369 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    |||||||||||||| |||||||||||| || | ||||||||     || || ||| |||||||||||| |||||| |||||||| |||||||    
T  5558415 aaccaagccttatcccactaagtggggtcggctacatggatcaaattatgccatagtgttctatcataaaccatatttggatcctactcatt 5558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 487
Target Start/End: Complemental strand, 23980162 - 23980095
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||| |||||| || |||||||||||||| ||| |||||| || | |||||||| |||||    
T  23980162 tgttctatcataaaccatatttagatccaactcattaatctataaatcattctcaatagtttctctta 23980095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Original strand, 28186863 - 28186906
Alignment:
Q  444 atccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||    
T  28186863 atccaactcattaatctctaaatctttcttaatagtttctctta 28186906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 38132618 - 38132543
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcata 431  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||||||||||||||||    
T  38132618 acaacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacgccataatgttctatcata 38132543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 470
Target Start/End: Complemental strand, 41894277 - 41894234
Alignment:
Q  427 tcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||    
T  41894277 tcataaaccatatttggatccaactcattaatctctaaatcttt 41894234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 395
Target Start/End: Original strand, 9460828 - 9460862
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtgggg 395  Q
    ||||||||||||||||||||||| |||||||||||    
T  9460828 acaacaataaccaagccttatcttactaagtgggg 9460862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 35615505 - 35615440
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||| || ||| ||  ||||||||||||| ||||||||| ||| | ||||||||    
T  35615505 ataatgttctatcataaactatatttttatccaactcattaatctctaaatttttatgaatagttt 35615440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 408494 - 408542
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  408494 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 2645272 - 2645224
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||| |||||| | ||||||||    
T  2645272 acaacaacaaccaagccttatcccactaagtagggccggctacatggat 2645224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 32489330 - 32489294
Alignment:
Q  359 ctacaacaataaccaagccttatctcactaagtgggg 395  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  32489330 ctacaacaacaaccaagccttatcccactaagtgggg 32489294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 481
Target Start/End: Complemental strand, 36200934 - 36200886
Alignment:
Q  433 accatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||| |||||||||||||||||  ||||| ||||||| |||||||||    
T  36200934 accatatttggatccaactcattaacctctatatcttttataatagttt 36200886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 454
Target Start/End: Complemental strand, 38830601 - 38830504
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg----attacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    ||||||| |||||| |||| || |||||||||||| |  | ||||||    |||||||||||||||||||||||| | |||| || | ||||||||||    
T  38830601 acaacaacaaccaaaccttttcccactaagtggggtcagctacatggatcaattacgctataatgttctatcatacatcatatttcggtccaactcat 38830504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 34505 - 34636
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| ||||||| |||||| |||||||||||| |  | ||||||||     ||||| |||||||||||||||| |||||| ||  ||||||||||||    
T  34505 acaacaacaaccaagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcatt 34604  T
Q  456 attctctaaatcttttttaatagtttatctta 487  Q
    | ||| || |||||| ||||| |||| |||||    
T  34605 aatctttagatctttcttaatggtttctctta 34636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 9593768 - 9593839
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    |||||||||||||||| |||||| | ||||||||||||||| ||||||| |||||  ||||||||| |||||    
T  9593768 ataatgttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatagtttctctta 9593839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 455
Target Start/End: Complemental strand, 12890857 - 12890758
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||| |||||||||||| |||||| ||||||| ||||||||    
T  12890857 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcatt 12890758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 34143765 - 34143890
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| || ||||||||| |||| ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  34143765 acaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 34143864  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  34143865 gacctctaaatcctttgtaatggttt 34143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 34156381 - 34156506
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| || ||||||||| |||| ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  34156381 acaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 34156480  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  34156481 gacctctaaatcctttgtaatggttt 34156506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 467
Target Start/End: Complemental strand, 9707053 - 9706941
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||| | |||||| |||||||||||||||    
T  9707053 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcat 9706954  T
Q  455 tattctctaaatc 467  Q
    ||  |||||||||    
T  9706953 taacctctaaatc 9706941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 487
Target Start/End: Complemental strand, 31818814 - 31818682
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||| || || | |||||||||| || | ||||||||     ||||  |||||||||||||||| |||||| || ||||||||||||    
T  31818814 tacaacaacaaccaagctttttcccgctaagtggggtcggctacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcat 31818715  T
Q  455 tattctctaaatcttttttaatagtttatctta 487  Q
    || |||| ||| ||||  ||||||||| |||||    
T  31818714 taatctccaaacctttcctaatagtttctctta 31818682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 471
Target Start/End: Original strand, 3206459 - 3206574
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||||||||||| |||||| |||||||||||| || | ||||||     || |||| ||| |||||||| | | |||||| ||||||||||||||||    
T  3206459 acaacaataaccaagtcttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctattaaaaaccatatttggatccaactcatt 3206558  T
Q  456 attctctaaatctttt 471  Q
       |||||||||||||    
T  3206559 gacctctaaatctttt 3206574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 470
Target Start/End: Complemental strand, 5096117 - 5096002
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||| ||||||| |||||||||||  || | |||| |||     ||||| |||||||||||||||| |||||| || ||||||||||||    
T  5096117 tacaacaacaaccaaaccttatcccactaagtgggatcggctacatagatcaaattacgccataatgttctatcataaaccatattttgatccaactcat 5096018  T
Q  455 tattctctaaatcttt 470  Q
    ||  | ||||||||||    
T  5096017 taaccactaaatcttt 5096002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 486
Target Start/End: Complemental strand, 24666033 - 24665963
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    |||||||||||||||| |||||| || |||||||||||||   |||||||| ||| |||||||||| ||||    
T  24666033 ataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttctctt 24665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 481
Target Start/End: Original strand, 14389213 - 14389286
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||  ||||||| ||||||| |||||| ||||||| |||| |||| ||||||||||||| |||| |||||    
T  14389213 attacgccctaatgttatatcataaaccatatttggatctaacttattaatctctaaatctttcttaagagttt 14389286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 481
Target Start/End: Complemental strand, 28085658 - 28085533
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || || | ||| |||||||||||| |||| | ||||||||||||||||    
T  28085658 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaactcatt 28085559  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       ||||||||| ||| |||| ||||    
T  28085558 gacctctaaatcctttctaatggttt 28085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 455
Target Start/End: Original strand, 34934828 - 34934929
Alignment:
Q  359 ctacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 453  Q
    ||||||||| |||||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||||||    
T  34934828 ctacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgaggccatagtgttctatcatacaccaaatttggatccaactca 34934927  T
Q  454 tt 455  Q
    ||    
T  34934928 tt 34934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 487
Target Start/End: Original strand, 43119 - 43183
Alignment:
Q  423 tctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||| || ||| || |||||||||||||| |||||| |||||| |||||||||| |||||    
T  43119 tctatcataaactatattttgatccaactcattactctctagatctttattaatagtttctctta 43183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 481
Target Start/End: Original strand, 1748006 - 1748070
Alignment:
Q  417 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||||||| ||| ||  ||||||||||||| ||||||||| ||| ||| ||||||    
T  1748006 taatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagttt 1748070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 480
Target Start/End: Complemental strand, 5897679 - 5897615
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 480  Q
    ||||| ||||| ||||||||||| || |||||||| ||||| | |||||||||||| ||||||||    
T  5897679 ataatattctaccatataccatattttgatccaacacattaatatctaaatcttttctaatagtt 5897615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 8364786 - 8364707
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| |||||||||||||||| |||||  ||   ||||||| |||| | ||||||||||| |||||||||| |||||    
T  8364786 attacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagtttctctta 8364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 6055832 - 6055902
Alignment:
Q  417 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||||||| ||| || ||| ||||||| |||||||||  ||||||||||||  ||||||||| |||||    
T  6055832 taatgttctattatacactatatttggatctaactcattaacctctaaatctttcataatagtttctctta 6055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 481
Target Start/End: Complemental strand, 30031535 - 30031413
Alignment:
Q  364 acaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattatt 458  Q
    |||| |||||||||||||| ||||||||| || || | ||||||     ||||||| ||| |||||||||||| |||||| ||  ||||||||||||       
T  30031535 acaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgac 30031436  T
Q  459 ctctaaatcttttttaatagttt 481  Q
    ||||||||| ||| |||| ||||    
T  30031435 ctctaaatcctttctaattgttt 30031413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 32756148 - 32756078
Alignment:
Q  411 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||| ||| |||||||||||| |||| | ||||||||||||||||   ||||||||||||| |||| ||||    
T  32756148 acgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcttttctaatggttt 32756078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 9568929 - 9568872
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 465  Q
    ||||||| |||| | ||||||||| |||||| |||||||||||||| || ||||||||    
T  9568929 attacgccataacggtctatcataaaccatatttggatccaactcaataatctctaaa 9568872  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 481
Target Start/End: Original strand, 10098958 - 10099019
Alignment:
Q  420 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||| |||||| ||  ||||||||||||   |||||||||||||||||| ||||    
T  10098958 tgttctatcatacaccatatttaaatccaactcattgacctctaaatcttttttaatggttt 10099019  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 12133902 - 12133950
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| ||||||||||| ||||||||||||||| || | ||||||||    
T  12133902 acaacaacaaccaagccttttctcactaagtggggtcggctacatggat 12133950  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 481
Target Start/End: Original strand, 18238210 - 18238270
Alignment:
Q  422 ttctatcatataccatagttggatccaactcattattctctaaatcttt-tttaatagttt 481  Q
    |||||||||||| |||| ||  ||||||||||||| ||| ||||||||| |||||||||||    
T  18238210 ttctatcatatatcatatttttatccaactcattaatctgtaaatctttctttaatagttt 18238270  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 20864867 - 20864835
Alignment:
Q  363 aacaataaccaagccttatctcactaagtgggg 395  Q
    ||||| |||||||||||||||||||||||||||    
T  20864867 aacaacaaccaagccttatctcactaagtgggg 20864835  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 31831920 - 31831984
Alignment:
Q  418 aatgttctatcatata-ccatagttggatccaactcattattctctaaatcttttttaatagttt 481  Q
    |||||||||||||| | ||||  |||||||||||||| || |||||| |||||| ||||||||||    
T  31831920 aatgttctatcataaaaccatgtttggatccaactcagtaatctctagatctttcttaatagttt 31831984  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 33730247 - 33730199
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  33730247 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 33730199  T

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Target: scaffold0570 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 481
Target Start/End: Original strand, 948 - 1073
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 455  Q
    ||||||| |||||||||||||| |||||| ||||| |  | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||    
T  948 acaacaacaaccaagccttatcccactaaatggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 1047  T
Q  456 attctctaaatcttttttaatagttt 481  Q
       |||||||||||||||||| ||||    
T  1048 gacctctaaatcttttttaatggttt 1073  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 481
Target Start/End: Complemental strand, 16861 - 16735
Alignment:
Q  360 tacaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 454  Q
    |||||||| |||||||||||||| |||||||||| | || | |||| ||| |     ||| ||| |||||||||| | |||||| |||||||||||||||    
T  16861 tacaacaacaaccaagccttatcccactaagtggagtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcat 16762  T
Q  455 tattctctaaatcttttttaatagttt 481  Q
    |   ||||||||||||| |||| ||||    
T  16761 tgacctctaaatcttttctaatggttt 16735  T

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Target: scaffold0279 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 487
Target Start/End: Complemental strand, 17733 - 17690
Alignment:
Q  444 atccaactcattattctctaaatcttttttaatagtttatctta 487  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||    
T  17733 atccaacccattaatctctaaatcttttttaatagtttctctta 17690  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 25503 - 25569
Alignment:
Q  416 ataatgttctatcatataccatagttggatccaactcattattctctaaatc-ttttttaatagttt 481  Q
    |||||||| ||||||||| | || ||  ||||||||||||| |||||||||| ||||||||||||||    
T  25503 ataatgttttatcatataacttatttctatccaactcattaatctctaaatcattttttaatagttt 25569  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 470
Target Start/End: Complemental strand, 39549 - 39487
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 470  Q
    ||||||| || ||||||||||||| |||| | |||||||||||||||||   |||||||||||    
T  39549 attacgccatcatgttctatcataaaccacatttggatccaactcattaccatctaaatcttt 39487  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 486
Target Start/End: Original strand, 160376 - 160454
Alignment:
Q  408 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 486  Q
    ||||||| |||||||||||||||| |||||| || | || ||||||||| | ||| |||||||  ||||||||| ||||    
T  160376 attacgccataatgttctatcataaaccatatttcggtcgaactcattaatttcttaatctttcctaatagtttctctt 160454  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Original strand, 28889 - 28937
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  28889 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 28937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 31750 - 31702
Alignment:
Q  361 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 409  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  31750 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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