View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0550_high_1 (Length: 458)

Name: NF0550_high_1
Description: NF0550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0550_high_1
NF0550_high_1
[»] chr1 (46 HSPs)
chr1 (148-458)||(51157640-51157950)
chr1 (29-147)||(51157437-51157556)
chr1 (82-147)||(3608035-3608100)
chr1 (80-147)||(29489362-29489429)
chr1 (80-141)||(7078509-7078570)
chr1 (80-141)||(11097893-11097954)
chr1 (80-141)||(27352631-27352692)
chr1 (80-147)||(7371951-7372018)
chr1 (86-149)||(8757519-8757582)
chr1 (80-135)||(26585188-26585243)
chr1 (80-147)||(42256461-42256528)
chr1 (80-141)||(40118724-40118785)
chr1 (80-141)||(18610774-18610835)
chr1 (80-141)||(32873342-32873403)
chr1 (82-147)||(50145804-50145869)
chr1 (80-140)||(3919301-3919361)
chr1 (80-147)||(25995461-25995528)
chr1 (80-144)||(29632435-29632499)
chr1 (80-147)||(36669373-36669440)
chr1 (80-144)||(43755684-43755748)
chr1 (80-147)||(13813559-13813626)
chr1 (80-135)||(26501296-26501351)
chr1 (80-135)||(26547235-26547290)
chr1 (82-141)||(34395928-34395987)
chr1 (80-135)||(35972819-35972874)
chr1 (80-147)||(43196092-43196159)
chr1 (80-135)||(43457834-43457889)
chr1 (80-147)||(51193134-51193201)
chr1 (82-147)||(25130706-25130771)
chr1 (80-146)||(42843348-42843414)
chr1 (80-141)||(46281437-46281499)
chr1 (80-141)||(2854969-2855030)
chr1 (80-141)||(12999831-12999892)
chr1 (80-144)||(30631849-30631914)
chr1 (80-141)||(32216003-32216064)
chr1 (80-141)||(32821636-32821697)
chr1 (80-141)||(41885722-41885783)
chr1 (80-144)||(43105106-43105170)
chr1 (80-141)||(49621364-49621425)
chr1 (82-142)||(16234302-16234362)
chr1 (80-144)||(21854470-21854534)
chr1 (80-144)||(23399995-23400059)
chr1 (77-117)||(41029029-41029069)
chr1 (74-141)||(47642615-47642683)
chr1 (80-144)||(49645363-49645427)
chr1 (80-144)||(50017429-50017493)
[»] chr7 (42 HSPs)
chr7 (80-147)||(29763831-29763898)
chr7 (80-147)||(30864420-30864487)
chr7 (80-147)||(33050184-33050251)
chr7 (80-141)||(7807056-7807117)
chr7 (79-148)||(37325821-37325890)
chr7 (80-148)||(2347061-2347129)
chr7 (75-146)||(25614825-25614896)
chr7 (80-147)||(44175546-44175613)
chr7 (80-141)||(4971291-4971352)
chr7 (80-141)||(28081791-28081852)
chr7 (80-141)||(30538627-30538688)
chr7 (80-141)||(33341134-33341195)
chr7 (80-141)||(43079641-43079702)
chr7 (80-147)||(29162282-29162349)
chr7 (82-146)||(37385237-37385301)
chr7 (75-146)||(10014959-10015030)
chr7 (80-147)||(42431724-42431791)
chr7 (83-146)||(43255571-43255634)
chr7 (80-147)||(44511140-44511207)
chr7 (74-135)||(3343344-3343406)
chr7 (79-141)||(17039157-17039219)
chr7 (82-148)||(30402177-30402243)
chr7 (80-141)||(35586781-35586843)
chr7 (75-141)||(37969927-37969993)
chr7 (101-135)||(49014414-49014448)
chr7 (80-133)||(7990080-7990133)
chr7 (82-135)||(11604697-11604750)
chr7 (84-141)||(18157194-18157251)
chr7 (80-141)||(19426581-19426642)
chr7 (80-141)||(26153647-26153707)
chr7 (80-141)||(28548230-28548291)
chr7 (80-141)||(38023433-38023494)
chr7 (81-134)||(41890529-41890582)
chr7 (80-149)||(47530292-47530361)
chr7 (80-135)||(8904421-8904477)
chr7 (80-148)||(19880233-19880301)
chr7 (80-135)||(23844966-23845021)
chr7 (80-147)||(27164840-27164907)
chr7 (74-147)||(37172981-37173050)
chr7 (80-135)||(37899227-37899283)
chr7 (80-144)||(40077255-40077319)
chr7 (80-144)||(44894479-44894543)
[»] chr8 (38 HSPs)
chr8 (82-147)||(14228710-14228775)
chr8 (80-144)||(37784380-37784444)
chr8 (80-147)||(30927934-30928001)
chr8 (81-147)||(43186298-43186364)
chr8 (80-141)||(40380282-40380343)
chr8 (80-147)||(5924811-5924878)
chr8 (80-147)||(10344325-10344392)
chr8 (80-146)||(36064031-36064097)
chr8 (80-144)||(8645166-8645231)
chr8 (80-141)||(9314412-9314473)
chr8 (80-141)||(32674241-32674302)
chr8 (82-141)||(9549207-9549267)
chr8 (80-147)||(1065418-1065485)
chr8 (82-141)||(12697722-12697781)
chr8 (80-131)||(14531622-14531673)
chr8 (80-147)||(41273516-41273583)
chr8 (80-147)||(41293724-41293791)
chr8 (80-141)||(3946241-3946303)
chr8 (80-141)||(5277712-5277774)
chr8 (80-146)||(28623115-28623181)
chr8 (80-141)||(34718116-34718178)
chr8 (80-141)||(34838279-34838340)
chr8 (80-141)||(41520969-41521031)
chr8 (80-141)||(9985687-9985748)
chr8 (80-144)||(18549980-18550044)
chr8 (80-141)||(20288534-20288595)
chr8 (80-141)||(21075163-21075224)
chr8 (80-141)||(22836148-22836209)
chr8 (80-129)||(23952495-23952544)
chr8 (80-141)||(27630898-27630959)
chr8 (80-141)||(32725789-32725850)
chr8 (80-141)||(40459771-40459832)
chr8 (80-144)||(42688428-42688492)
chr8 (80-141)||(43605662-43605723)
chr8 (80-144)||(3650114-3650178)
chr8 (87-147)||(20895997-20896057)
chr8 (86-146)||(39359743-39359803)
chr8 (78-141)||(44061716-44061780)
[»] chr2 (39 HSPs)
chr2 (80-149)||(13553148-13553217)
chr2 (80-141)||(3091742-3091803)
chr2 (80-147)||(6884911-6884978)
chr2 (80-147)||(29893611-29893678)
chr2 (80-147)||(34144554-34144621)
chr2 (80-147)||(35171229-35171296)
chr2 (80-147)||(36383463-36383530)
chr2 (80-147)||(44484659-44484726)
chr2 (74-144)||(9384370-9384440)
chr2 (80-141)||(18508079-18508140)
chr2 (80-141)||(34139047-34139108)
chr2 (80-141)||(34373006-34373067)
chr2 (80-147)||(3196090-3196157)
chr2 (80-144)||(10288151-10288215)
chr2 (81-144)||(14233724-14233788)
chr2 (80-147)||(27307234-27307301)
chr2 (80-147)||(38246754-38246821)
chr2 (80-135)||(6328668-6328723)
chr2 (80-135)||(14954614-14954669)
chr2 (80-147)||(36909846-36909913)
chr2 (80-134)||(5954499-5954553)
chr2 (80-146)||(9695065-9695131)
chr2 (80-141)||(18723595-18723657)
chr2 (79-141)||(26321706-26321768)
chr2 (79-141)||(26321874-26321936)
chr2 (80-146)||(29168726-29168792)
chr2 (79-148)||(33030104-33030174)
chr2 (80-141)||(35589395-35589457)
chr2 (80-141)||(36802897-36802959)
chr2 (80-144)||(7502433-7502498)
chr2 (80-141)||(8352836-8352897)
chr2 (77-141)||(13347823-13347888)
chr2 (80-141)||(14713987-14714048)
chr2 (80-141)||(28165130-28165191)
chr2 (80-149)||(30192352-30192421)
chr2 (80-141)||(40721772-40721833)
chr2 (80-141)||(7428434-7428491)
chr2 (80-132)||(20534069-20534121)
chr2 (74-141)||(44711997-44712065)
[»] chr5 (42 HSPs)
chr5 (80-147)||(38010873-38010940)
chr5 (80-135)||(30420627-30420682)
chr5 (71-149)||(582868-582946)
chr5 (82-147)||(11464125-11464190)
chr5 (75-147)||(3263511-3263583)
chr5 (80-147)||(9594479-9594546)
chr5 (80-147)||(9599731-9599798)
chr5 (80-147)||(30574380-30574447)
chr5 (80-141)||(8675441-8675503)
chr5 (80-149)||(7144578-7144647)
chr5 (80-141)||(27440480-27440541)
chr5 (80-141)||(35814454-35814515)
chr5 (83-135)||(3154658-3154710)
chr5 (80-144)||(4820156-4820220)
chr5 (82-146)||(17489351-17489415)
chr5 (80-135)||(18511810-18511866)
chr5 (80-135)||(30103466-30103521)
chr5 (81-141)||(36624320-36624380)
chr5 (80-147)||(4954467-4954534)
chr5 (80-135)||(10232500-10232555)
chr5 (80-147)||(22920495-22920562)
chr5 (80-141)||(189711-189773)
chr5 (80-141)||(8920079-8920141)
chr5 (75-141)||(12661956-12662022)
chr5 (80-141)||(19481190-19481252)
chr5 (80-141)||(32912039-32912101)
chr5 (80-141)||(34124622-34124684)
chr5 (80-141)||(34693225-34693286)
chr5 (80-146)||(39788710-39788776)
chr5 (80-141)||(41175714-41175776)
chr5 (80-141)||(20985538-20985599)
chr5 (80-141)||(26660420-26660481)
chr5 (80-141)||(26932012-26932073)
chr5 (80-141)||(29765831-29765892)
chr5 (80-149)||(35098733-35098802)
chr5 (80-144)||(1774289-1774353)
chr5 (80-144)||(24329988-24330052)
chr5 (80-135)||(25871460-25871516)
chr5 (80-135)||(30640791-30640847)
chr5 (80-147)||(32634709-32634776)
chr5 (80-144)||(36581471-36581535)
chr5 (80-144)||(38500944-38501008)
[»] chr3 (52 HSPs)
chr3 (71-135)||(2482689-2482753)
chr3 (80-147)||(11327109-11327176)
chr3 (80-141)||(30400165-30400226)
chr3 (80-141)||(38944150-38944211)
chr3 (80-141)||(50025707-50025768)
chr3 (80-144)||(7351644-7351708)
chr3 (80-144)||(48944716-48944780)
chr3 (80-147)||(8254028-8254095)
chr3 (80-147)||(32931921-32931988)
chr3 (79-141)||(39697230-39697293)
chr3 (80-147)||(46344415-46344482)
chr3 (74-141)||(47141609-47141676)
chr3 (80-141)||(48205046-48205107)
chr3 (80-141)||(1295333-1295394)
chr3 (80-141)||(1402651-1402712)
chr3 (81-141)||(18741119-18741180)
chr3 (80-141)||(29525234-29525295)
chr3 (80-149)||(35376552-35376621)
chr3 (80-141)||(36818957-36819018)
chr3 (80-141)||(44910698-44910759)
chr3 (80-141)||(49761195-49761256)
chr3 (80-149)||(53718050-53718118)
chr3 (80-149)||(53932392-53932461)
chr3 (80-135)||(3347136-3347192)
chr3 (81-141)||(38471644-38471704)
chr3 (80-147)||(13159662-13159729)
chr3 (80-135)||(20549400-20549455)
chr3 (80-147)||(20714244-20714311)
chr3 (80-135)||(37754448-37754503)
chr3 (80-135)||(40419657-40419712)
chr3 (80-147)||(50879596-50879663)
chr3 (80-141)||(24095414-24095476)
chr3 (80-141)||(34057961-34058023)
chr3 (80-141)||(43904974-43905036)
chr3 (80-149)||(48352997-48353067)
chr3 (80-141)||(48405411-48405473)
chr3 (80-141)||(462410-462471)
chr3 (80-141)||(2280178-2280239)
chr3 (80-141)||(7867720-7867781)
chr3 (80-141)||(9557931-9557992)
chr3 (82-135)||(16139310-16139363)
chr3 (80-149)||(27198161-27198230)
chr3 (73-141)||(29573364-29573433)
chr3 (80-141)||(44855252-44855313)
chr3 (80-141)||(49196697-49196758)
chr3 (80-135)||(22371192-22371248)
chr3 (80-144)||(25559705-25559769)
chr3 (80-131)||(42683828-42683880)
chr3 (80-135)||(50559226-50559282)
chr3 (80-147)||(53102905-53102972)
chr3 (80-135)||(53473611-53473666)
chr3 (80-140)||(55344306-55344366)
[»] scaffold0011 (1 HSPs)
scaffold0011 (80-147)||(18596-18663)
[»] scaffold0522 (1 HSPs)
scaffold0522 (80-146)||(2508-2574)
[»] chr6 (15 HSPs)
chr6 (80-146)||(3339503-3339569)
chr6 (79-147)||(7577189-7577257)
chr6 (80-141)||(3088974-3089035)
chr6 (80-141)||(25995443-25995504)
chr6 (80-147)||(2056784-2056851)
chr6 (80-147)||(3660356-3660423)
chr6 (82-144)||(3401087-3401149)
chr6 (82-144)||(29197727-29197789)
chr6 (80-141)||(35213569-35213631)
chr6 (80-141)||(25554246-25554307)
chr6 (80-141)||(26094906-26094967)
chr6 (80-149)||(28965841-28965910)
chr6 (80-141)||(32729890-32729951)
chr6 (80-135)||(15318202-15318258)
chr6 (82-141)||(34570603-34570663)
[»] chr4 (52 HSPs)
chr4 (80-141)||(7037493-7037554)
chr4 (80-144)||(45521585-45521649)
chr4 (80-135)||(1796367-1796422)
chr4 (80-147)||(40721967-40722034)
chr4 (83-137)||(33484121-33484175)
chr4 (80-141)||(4100764-4100825)
chr4 (80-141)||(5208336-5208397)
chr4 (80-141)||(18880786-18880847)
chr4 (80-141)||(23347776-23347837)
chr4 (80-141)||(31240649-31240710)
chr4 (80-141)||(41609688-41609749)
chr4 (82-147)||(47519723-47519788)
chr4 (82-147)||(52487272-52487337)
chr4 (80-147)||(3222990-3223057)
chr4 (74-141)||(51887658-51887726)
chr4 (80-140)||(55960701-55960761)
chr4 (80-135)||(3475870-3475925)
chr4 (80-147)||(13267481-13267548)
chr4 (80-147)||(27001412-27001479)
chr4 (80-135)||(47105912-47105967)
chr4 (80-147)||(51377296-51377363)
chr4 (80-135)||(52669624-52669679)
chr4 (80-135)||(53662443-53662498)
chr4 (80-135)||(54801502-54801557)
chr4 (80-147)||(55268004-55268071)
chr4 (80-146)||(8680942-8681008)
chr4 (80-141)||(21617184-21617246)
chr4 (80-141)||(24235321-24235382)
chr4 (80-146)||(32901330-32901396)
chr4 (80-141)||(37514140-37514202)
chr4 (80-133)||(53384344-53384397)
chr4 (80-141)||(56557734-56557796)
chr4 (80-141)||(1987722-1987783)
chr4 (80-141)||(2615137-2615198)
chr4 (80-141)||(6126854-6126915)
chr4 (80-141)||(31318754-31318815)
chr4 (80-141)||(34116549-34116610)
chr4 (80-141)||(34259816-34259877)
chr4 (80-141)||(36444404-36444465)
chr4 (80-141)||(39449174-39449234)
chr4 (80-141)||(40629349-40629410)
chr4 (78-147)||(45548787-45548856)
chr4 (80-133)||(46480521-46480574)
chr4 (80-141)||(46566930-46566991)
chr4 (80-141)||(48722070-48722131)
chr4 (80-132)||(169520-169572)
chr4 (82-146)||(925066-925130)
chr4 (80-144)||(6953394-6953458)
chr4 (80-135)||(9032781-9032836)
chr4 (80-135)||(26206991-26207047)
chr4 (80-147)||(44368205-44368272)
chr4 (74-110)||(54622531-54622567)
[»] scaffold0003 (1 HSPs)
scaffold0003 (80-133)||(88809-88862)
[»] scaffold0004 (1 HSPs)
scaffold0004 (80-147)||(249145-249212)
[»] scaffold0514 (2 HSPs)
scaffold0514 (80-135)||(1511-1566)
scaffold0514 (80-141)||(1854-1915)
[»] scaffold0002 (2 HSPs)
scaffold0002 (80-147)||(147259-147326)
scaffold0002 (86-141)||(469646-469702)
[»] scaffold0651 (1 HSPs)
scaffold0651 (80-141)||(4855-4916)
[»] scaffold0592 (1 HSPs)
scaffold0592 (80-141)||(911-972)
[»] scaffold0508 (1 HSPs)
scaffold0508 (80-141)||(11545-11606)
[»] scaffold0204 (1 HSPs)
scaffold0204 (80-141)||(27340-27401)
[»] scaffold0131 (1 HSPs)
scaffold0131 (80-141)||(15543-15604)
[»] scaffold0016 (1 HSPs)
scaffold0016 (80-132)||(204463-204515)


Alignment Details
Target: chr1 (Bit Score: 295; Significance: 1e-165; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 148 - 458
Target Start/End: Original strand, 51157640 - 51157950
Alignment:
Q  148 atctgcctctttacaatatatattgcatgctgctttttaatttgccagataaacaactacatttcatattatgttttgtacaatatgcaatcattttaca 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51157640 atctgcctctttacaatatatattgcatgctgctttttaatttgccagataaacaactacatttcatattatgttttgtacaatatgcaatcattttaca 51157739  T
Q  248 tcctaaaaatgcatgaggtatgatcatgctgcatgtaaatgaaaaattacaagtttcagcttttgatacaagattgtcatgtttgcttttgatacaaggt 347  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51157740 tcctaaaaatgcatgaggtatgatcatgctgcatgtaattgaaaaattacaagtttcagctttagatacaagattgtcatgtttgcttttgatacaaggt 51157839  T
Q  348 tgccatgttttcctgtctagattaagtactgagaaaccaagaattatgatttcaccaacaagatcaacagggaaccctatgcccaaaaatgggacaattt 447  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51157840 tgccatgttttcctgtctagattaagtacagagaaaccaagaattatgatttcactaacaagatcaacagggaaccctatgcccaaaaatgggacaattt 51157939  T
Q  448 ctacagcgacc 458  Q
    |||||||||||    
T  51157940 ctacagcgacc 51157950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 51157437 - 51157556
Alignment:
Q  29 agatatgttacttccatgtgagactgtgtggtttaagtttggaacaaattaagaaatgatatttgtacatcaattttgtgataa-attttgtacaatttt 127  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  51157437 agatatgttacttccatgtgagactgtgtggtttaagtttgaaacaaattaagaaattatatttgtacatcaattttgtgataactttttgtacaatttt 51157536  T
Q  128 ctctctcacactcatatgat 147  Q
    || ||||||||||| |||||    
T  51157537 ctttctcacactcacatgat 51157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 3608100 - 3608035
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  3608100 aaatgatatttgtacatcaattttgtgataaattttgtataattttctctctcacactcagatgat 3608035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 29489429 - 29489362
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | |||||||||||| ||| |||||| ||||||||||| ||||| |||||    
T  29489429 agaaatgatatttgtacaaccattttgtgataactttggtacaactttctctctcatactcacatgat 29489362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 7078570 - 7078509
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||||||| || ||||| |||| ||||||||||| |||||    
T  7078570 agaaatgatatttgtacatctattttgtgacaacttttgaacaactttctctctcatactca 7078509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 11097954 - 11097893
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||||||| || ||||| |||| ||||||||||| |||||    
T  11097954 agaaatgatatttgtacatccattttgtgacaacttttgaacaactttctctctcatactca 11097893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 27352631 - 27352692
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||||||||| ||||| |||| ||||||||||| |||||    
T  27352631 agaaatgatatttgtacaaccattttgtgataacttttggacaactttctctctcatactca 27352692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 7372018 - 7371951
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||| ||| || |||||||||||||||||||||| ||| |||||||    
T  7372018 agaaatgatatttgtacaactaatttatgacaatttttgtacaattttctctctcatacttatatgat 7371951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 8757582 - 8757519
Alignment:
Q  86 gatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    ||||||| |||| ||||||| |||||| ||||| |||| |||||||||||||||||||| ||||    
T  8757582 gatatttatacaacaattttatgataatttttggacaactttctctctcacactcatattatat 8757519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 26585243 - 26585188
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||| | |||||||||||| |||||||||| ||| |||||||    
T  26585243 agaaatgatatttgtacaactattttgtgataacttttgtacaactttttctctca 26585188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 42256461 - 42256528
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | ||||||||| || ||| |||||| ||||||||||| ||||| |||||    
T  42256461 agaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacatgat 42256528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 40118785 - 40118724
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||||||||||||| |||||    
T  40118785 agaaatgatatttgtacaatcatttttgt-ataatttttgtacaattttctctctcatactca 40118724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 18610774 - 18610835
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||| || |||| ||||| ||||||||||| |||||    
T  18610774 agaaatgatatttgtacaactattttgtgacaacttttttacaactttctctctcatactca 18610835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 32873342 - 32873403
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||| || | ||||| |||||    
T  32873342 agaaatgatatttgtacatccattttatgataacttttgtacaatcttttatctcatactca 32873403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 50145869 - 50145804
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||| ||||||||||| | ||||||||| || ||||| | |||||||||||||| |||||||||||    
T  50145869 aaataatatttgtacaactattttgtgacaacttttgaataattttctctctcatactcatatgat 50145804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 3919301 - 3919361
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactc 140  Q
    |||||||||||||||||| | ||||||| |||| ||||| |||| ||||||||||| ||||    
T  3919301 agaaatgatatttgtacaaccattttgttataatttttggacaactttctctctcatactc 3919361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 25995461 - 25995528
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  25995461 agaaatgatatttgtacaatcaa-tttgtgacaagttttgtacaactttctctctcatactcacatgat 25995528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 29632435 - 29632499
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||||  ||||||| | || ||||  |||||||||||||||||| ||||||    
T  29632435 agaaatgatatttgtacatttattttgtaacaattttttgacaattttctctctcacattcatat 29632499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 36669440 - 36669373
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||| ||| ||||||| ||||| |||||    
T  36669440 agaaatgatatttgtacaatcaa-tttgtgataatttttgtacaactttttctctcatactcacatgat 36669373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 43755748 - 43755684
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | ||||| |||||| ||||  |||||||||||| ||| ||||||||    
T  43755748 agaaatgatatttgtacaaccattttatgataattttttgacaattttctctttcatactcatat 43755684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 13813559 - 13813626
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || || ||||||| ||||||||||| ||||| |||||    
T  13813559 agaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctctcatactcacatgat 13813626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 26501296 - 26501351
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||| | ||||||| |||| ||||| |||| |||||||||||    
T  26501296 agaaatgatatttgtacaaccattttgtaataacttttggacaactttctctctca 26501351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 26547235 - 26547290
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||||  ||||||||| || ||||| |||| |||||||||||    
T  26547235 agaaatgatatttgtacatatattttgtgacaatttttgaacaactttctctctca 26547290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 34395987 - 34395928
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| ||||| ||| || ||||| |||| ||||||||||| |||||    
T  34395987 aaatgatatttgtacatctattttatgacaacttttgaacaactttctctctcatactca 34395928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 35972874 - 35972819
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||| || | ||||||||| || |||||||||| |||||||||||    
T  35972874 agaaatgatatttgttcaaccattttgtgacaacttttgtacaactttctctctca 35972819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 43196159 - 43196092
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||||| ||||||  | || ||||  |||||||||||||||| ||||| |||||    
T  43196159 agaaatgatatttgtacatccattttgctacaactttttgacaattttctctctcatactcacatgat 43196092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 43457889 - 43457834
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||| | |||||| ||||| ||||| |||| |||||||||||    
T  43457889 agaaatgatatttgtacaaccattttgcgataacttttggacaactttctctctca 43457834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 51193201 - 51193134
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||||| ||||| | | || ||||| |||| ||||||||||| ||||| |||||    
T  51193201 agaaatgatatttgtacatccattttataacaatttttggacaactttctctctcatactcacatgat 51193134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 25130706 - 25130771
Alignment:
Q  82 aaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||| ||||| ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  25130706 aaatgatatttgtacaatcaa-tttgtgacaacttttgtacaactttctctctcatactcacatgat 25130771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 42843414 - 42843348
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||| ||||||| |||||| ||||| | |||||| ||||| | ||||| ||||    
T  42843414 agaaatgatatttgtacaacaattttttgataacttttgcataattttttctcttatactcacatga 42843348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 46281437 - 46281499
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||| |||| |||||| |||| ||||||||||| |||||    
T  46281437 agaaatgatatttgtacaactattttgtaataatttttgtgacaactttctctctcatactca 46281499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 2855030 - 2854969
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||  ||||| ||| || ||||||||||| || ||||||| |||||    
T  2855030 agaaatgatatttgtacattcattttatgacaacttttgtacaatcttttctctcatactca 2854969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 12999892 - 12999831
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||| | | || |||||||||| ||||||||||| |||||    
T  12999892 agaaatgatatttgtacaaccattttctaacaacttttgtacaactttctctctcatactca 12999831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 30631914 - 30631849
Alignment:
Q  80 agaaatgatatttgtacatcaatttt-gtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||| ||||||||| ||||| ||||||| ||||  |||| ||||||||||| ||||||||    
T  30631914 agaaatgatacttgtacatctatttttgtgataactttttgacaactttctctctcatactcatat 30631849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 32216003 - 32216064
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||||  |||||| | |||||||||  |||| ||||||||||| |||||    
T  32216003 agaaatgatatttgtacaataattttttaataaattttagacaactttctctctcatactca 32216064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 32821636 - 32821697
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || ||||  |||||||||||||||| |||||    
T  32821636 agaaatgatatttgtacaaccactttgtgacaacttttaaacaattttctctctcatactca 32821697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 41885722 - 41885783
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||||   |||||||||||  |||| |||||||||| |||||| |||||    
T  41885722 agaaatgatatttgtacaattattttgtgatagtttttatacaattttcactctcatactca 41885783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 43105106 - 43105170
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | | |||||| |||| |||| ||||||||||||||||| ||||||||    
T  43105106 agaaatgatatttgtacaattatttttgt-ataatttttatacaattttctctctcatactcatat 43105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 49621364 - 49621425
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||| |||| ||||  |||| ||||||||||| |||||    
T  49621364 agaaatgatatttgtacaaccattttgtaataatttttagacaactttctctctcatactca 49621425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 16234362 - 16234302
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcat 142  Q
    |||||||||||||||||| ||||| ||| || ||||||| ||  |||||||||| ||||||    
T  16234362 aaatgatatttgtacatccattttatgacaacttttgtataaccttctctctcatactcat 16234302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 21854534 - 21854470
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    ||||||||||||||||||   ||||||  | || |||||||||| ||||||||||| ||||||||    
T  21854534 agaaatgatatttgtacaattattttggtacaacttttgtacaactttctctctcatactcatat 21854470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 23400059 - 23399995
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | |||||   | || ||||||||||| |||||||||| ||||||||    
T  23400059 agaaatgatatttgtacaaccatttttatacaacttttgtacaatcttctctctcatactcatat 23399995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 41029069 - 41029029
Alignment:
Q  77 ttaagaaatgatatttgtacatcaattttgtgataaatttt 117  Q
    |||||||||||||||||||||   |||||||||||||||||    
T  41029069 ttaagaaatgatatttgtacaatcattttgtgataaatttt 41029029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 47642683 - 47642615
Alignment:
Q  74 aaattaagaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    ||||| |||||||||||||| ||| | ||||| |||||| |||||| |||| ||||||||||| |||||    
T  47642683 aaattgagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactca 47642615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 49645363 - 49645427
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||| |   ||||| ||| || |||||||||||||||||| ||| ||||||||    
T  49645363 agaaatgatatttgtataatcattttatgacaacttttgtacaattttctctttcatactcatat 49645427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 50017493 - 50017429
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| ||||||| | | || ||||  |||| ||||||||||| ||||||||    
T  50017493 agaaatgatatttgtacaacaattttattacaactttttgacaactttctctctcatactcatat 50017429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 29763831 - 29763898
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | |||||||||||| |||||||||| ||||| ||||| |||||||||||    
T  29763831 agaaatgatatttgtacaaccattttgtgataacttttgtacaactttctttctcatactcatatgat 29763898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 30864487 - 30864420
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| |||||||||||    
T  30864487 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcatatgat 30864420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 33050184 - 33050251
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | ||||||||| || |||||||||| ||||||||||| ||||| |||||    
T  33050184 agaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacatgat 33050251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 7807056 - 7807117
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||||||||||| ||||| ||| ||||||| |||||    
T  7807056 agaaatgatatttgtacacccattttgtgataaattttttacaactttttctctcatactca 7807117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 37325890 - 37325821
Alignment:
Q  79 aagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgata 148  Q
    ||||||||||||||||||| | | ||||||| || |||||||||||||||||| ||| ||||| ||||||    
T  37325890 aagaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctctttcatactcacatgata 37325821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 2347129 - 2347061
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgata 148  Q
    |||||||||||||||||| | ||||||||| || ||| |||||| ||||||||||| ||||| ||||||    
T  2347129 agaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacatgata 2347061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 25614896 - 25614825
Alignment:
Q  75 aattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||| |||||||||||||||||||| ||||| |||||| ||||| |||| ||||||| ||| ||||| ||||    
T  25614896 aattgagaaatgatatttgtacatccattttttgataacttttgcacaactttctctttcatactcacatga 25614825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 44175546 - 44175613
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||| |||||||||||   |||||||||||| |||||||||| ||||||||||| ||||| |||||    
T  44175546 agaaataatatttgtacaatcattttgtgataacttttgtacaactttctctctcatactcacatgat 44175613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 4971291 - 4971352
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||| || |||| ||||| ||||||||||| |||||    
T  4971291 agaaatgatatttgtacaaccattttgtgacaacttttatacaactttctctctcatactca 4971352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 28081852 - 28081791
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||| |||| |||| ||||| ||||||||||| |||||    
T  28081852 agaaatgatatttgtacaaccattttgtaataatttttttacaactttctctctcatactca 28081791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 30538627 - 30538688
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| ||||||||  | || |||||||||| ||||||||||| |||||    
T  30538627 agaaatgatatttgtacaacaattttggtacaacttttgtacaactttctctctcatactca 30538688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 33341195 - 33341134
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| |||||||   |||| |||||||||||||||||| ||| |||||    
T  33341195 agaaatgatatttgtacaacaattttagtataacttttgtacaattttctctttcatactca 33341134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 43079702 - 43079641
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | |||||||||| ||||| |||| ||||||||||| |||||    
T  43079702 agaaatgatatttgtacaaccactttgtgataatttttggacaactttctctctcatactca 43079641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 29162349 - 29162282
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| ||||||| |||| || ||||||| || ||||||||||| |||||||||||    
T  29162349 agaaatgatatttgtacaatcaattt-gtgacaacttttgtataactttctctctcatactcatatgat 29162282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 37385301 - 37385237
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||| | ||||| ||| || |||||||||| ||||||||||| ||||| ||||    
T  37385301 aaatgatatttgtacaactattttttgacaacttttgtacaactttctctctcatactcacatga 37385237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 10015030 - 10014959
Alignment:
Q  75 aattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    ||||||||||||||||||||||| | ||||| ||||||  |||| |||| ||| ||||||| ||||| ||||    
T  10015030 aattaagaaatgatatttgtacaactattttatgataatatttggacaactttttctctcatactcacatga 10014959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 42431724 - 42431791
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||| |||| | | |||||||||| |||||||||||||||| | ||| ||||| |||||    
T  42431724 agaaatgatatttatacacctaatttgtgataacttttgtacaattttctatatcatactcacatgat 42431791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 43255634 - 43255571
Alignment:
Q  83 aatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||   ||||||||| || |||||||||||||||| ||||| ||||| ||||    
T  43255634 aatgatatttgtacaattattttgtgacaatttttgtacaattttctttctcatactcacatga 43255571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 44511140 - 44511207
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||| ||||| | ||||||||| || |||||||||| ||||||| ||| ||||| |||||    
T  44511140 agaaatgatattcgtacaaccattttgtgacaacttttgtacaactttctctttcatactcacatgat 44511207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 3343406 - 3343344
Alignment:
Q  74 aaattaagaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctca 135  Q
    |||||||||||||||||||| ||||  ||||| ||| || |||||| ||||||||||||||||    
T  3343406 aaattaagaaatgatatttgaacattcattttatgacaatttttgtgacaattttctctctca 3343344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 17039157 - 17039219
Alignment:
Q  79 aagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||||| | |||||   |||| |||||||||| ||||||||||| |||||    
T  17039157 aagaaatgatatttgtacaactatttttgtataatttttgtacaactttctctctcatactca 17039219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 30402243 - 30402177
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgata 148  Q
    |||||||||||||| |   ||||| |||||| ||||||| || ||||||||||| ||||||||||||    
T  30402243 aaatgatatttgtatagtcattttttgataacttttgtataactttctctctcatactcatatgata 30402177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 35586843 - 35586781
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||| |||||| |||||| |||| ||||||||||| |||||    
T  35586843 agaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactca 35586781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 37969927 - 37969993
Alignment:
Q  75 aattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||| |||||||||||||||||| | ||||||  | || |||||||||| ||||||||||| |||||    
T  37969927 aattgagaaatgatatttgtacaactattttgatacaacttttgtacaactttctctctcatactca 37969993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 135
Target Start/End: Complemental strand, 49014448 - 49014414
Alignment:
Q  101 attttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||| ||||||||||||||||||||||    
T  49014448 attttgtgataatttttgtacaattttctctctca 49014414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 7990080 - 7990133
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctct 133  Q
    |||||||||||||||||||| ||||| |||||| ||||  | ||||||||||||    
T  7990080 agaaatgatatttgtacatctattttatgataattttttgataattttctctct 7990133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 11604750 - 11604697
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||||  |||||| |||||| ||||| |||||||| |||||||    
T  11604750 aaatgatatttgtacaaaaattttatgataatttttgaacaattttatctctca 11604697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 18157251 - 18157194
Alignment:
Q  84 atgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||| | | |||||||||| ||||  |||||||||||||||| |||||    
T  18157251 atgatatttgtacaaccactttgtgataatttttagacaattttctctctcatactca 18157194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 19426581 - 19426642
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||| || ||||  |||| ||||||||||| |||||    
T  19426581 agaaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatactca 19426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 26153647 - 26153707
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||| ||| || ||||| |||||||||||||||| |||||    
T  26153647 agaaatgatatttgtacaactattttatgacaacttttg-acaattttctctctcatactca 26153707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 28548291 - 28548230
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||  | || |||||||||| ||||||||||| |||||    
T  28548291 agaaatgatatttgtacaactattttggtacaacttttgtacaactttctctctcatactca 28548230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 38023494 - 38023433
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | |||||||||| ||||  |||| ||||||||||| |||||    
T  38023494 agaaatgatatttgtacaaccactttgtgataatttttagacaactttctctctcatactca 38023433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 41890529 - 41890582
Alignment:
Q  81 gaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctc 134  Q
    ||||||||||||||||||||||||||  | || ||||  |||||||||||||||    
T  41890529 gaaatgatatttgtacatcaattttgcaacaattttttgacaattttctctctc 41890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 47530361 - 47530292
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    ||||||||||||| |||| | ||||| ||| || ||||| ||||||||||||||||  ||||| ||||||    
T  47530361 agaaatgatatttatacaaccattttatgacaacttttgaacaattttctctctcattctcatgtgatat 47530292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 8904477 - 8904421
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctca 135  Q
    |||||||||||||| ||| |  ||||||||||| |||||| ||||||||||||||||    
T  8904477 agaaatgatatttgaacaaccgttttgtgataatttttgtgacaattttctctctca 8904421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 19880301 - 19880233
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgata 148  Q
    ||||||||| |||||||| | | ||||||| || |||||||||| ||| ||||| | ||||||||||||    
T  19880301 agaaatgatgtttgtacaaccaatttgtgacaacttttgtacaactttatctctaatactcatatgata 19880233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 23844966 - 23845021
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctca 135  Q
    |||||||||||||||||| ||||||||| || |||||||| ||||||||||| ||||    
T  23844966 agaaatgatatttgtacaacaattttgtaat-aattttgtgacaattttctcactca 23845021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 27164907 - 27164840
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| ||||||| |||| || ||||||| || ||||||||||| ||||| |||||    
T  27164907 agaaatgatatttgtacaatcaattt-gtgacaacttttgtataactttctctctcatactcacatgat 27164840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 37173050 - 37172981
Alignment:
Q  74 aaattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||| ||||||||||||||||||| | | |||||||||| |||||||    ||||||||||| ||| |||||||    
T  37173050 aaataaagaaatgatatttgtacaaccaatttgtgataacttttgta----tttctctctcatacttatatgat 37172981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 37899283 - 37899227
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctca 135  Q
    |||||||||||||| ||||| ||||||||| || |||||| |||| |||||||||||    
T  37899283 agaaatgatatttgaacatccattttgtgacaatttttgtgacaactttctctctca 37899227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 40077255 - 40077319
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||| ||||||||||| | ||||||| | || ||||  |||| ||||||||||||||||||||    
T  40077255 agaaattatatttgtacaactattttgtaacaatttttagacaactttctctctcacactcatat 40077319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 44894543 - 44894479
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||||| ||||| |||||| ||||  ||||  |||| ||||| ||||||||    
T  44894543 agaaatgatatttgtacatccattttatgataactttttgacaacattctttctcatactcatat 44894479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 14228710 - 14228775
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||| | |||||||||||| |||||||||| ||||||||||| ||||| |||||    
T  14228710 aaatgatatttgtacaactattttgtgataacttttgtacaactttctctctcatactcacatgat 14228775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 37784444 - 37784380
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | ||||||  |||| |||||||||||||||||||||| ||||||||    
T  37784444 agaaatgatatttgtacaaccattttggtataacttttgtacaattttctctctcatactcatat 37784380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 30928001 - 30927934
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| |||||||||||    
T  30928001 agaaatgatatttgtacaaccaatttgtgacaatttttgtacaactttctctctcatactcatatgat 30927934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 43186298 - 43186364
Alignment:
Q  81 gaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||   |||||||||||| |||||||||| ||||||||||| ||||| |||||    
T  43186298 gaaatgatatttgtacaattattttgtgataatttttgtacaactttctctctcatactcacatgat 43186364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 40380282 - 40380343
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||| ||| || |||||||||| ||||||||||| |||||    
T  40380282 agaaatgatatttgtacatctattttatgacaacttttgtacaactttctctctcatactca 40380343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 5924811 - 5924878
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||| ||||||| ||||| | |||| |||||||||| ||||||||||| ||||| |||||    
T  5924811 agaaatgatattcgtacatctattttataataatttttgtacaactttctctctcatactcacatgat 5924878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 10344325 - 10344392
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||||| ||||| | |||| ||||| |||| ||||||||||| ||||| |||||    
T  10344325 agaaatgatatttgtacatctattttataataatttttggacaactttctctctcatactcacatgat 10344392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 36064031 - 36064097
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    ||||||||||||||||||   ||||||||| || ||||| |||||||||||||||| ||||| ||||    
T  36064031 agaaatgatatttgtacaatcattttgtgacaacttttggacaattttctctctcatactcacatga 36064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 8645166 - 8645231
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaatttt-gtacaattttctctctcacactcatat 144  Q
    |||||||||||||| ||||| |||| ||||||| |||| | |||||||||||||||| ||||||||    
T  8645166 agaaatgatatttgaacatccatttggtgataatttttgggacaattttctctctcatactcatat 8645231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 9314412 - 9314473
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||| ||| || ||||||||||  |||||||||| |||||    
T  9314412 agaaatgatatttgtacatccattttatgacaatttttgtacaaccttctctctcatactca 9314473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 32674302 - 32674241
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||  |||| |||||||||| ||||||||||| |||||    
T  32674302 agaaatgatatttgtacaaccattttggtataacttttgtacaactttctctctcatactca 32674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 9549267 - 9549207
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||| ||||| ||||||||| || |||||| |||||||||||||||| |||||    
T  9549267 aaatgatatttgaacatccattttgtgacaacttttgtgacaattttctctctcatactca 9549207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 1065418 - 1065485
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || || ||||||| ||||||||||| ||||| |||||    
T  1065418 agaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctctcatactcacatgat 1065485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 12697781 - 12697722
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||| |||| | ||||| |||||| ||||| |||| |||||||||||||||||    
T  12697781 aaatgatatttatacaactattttatgataatttttgaacaactttctctctcacactca 12697722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 14531622 - 14531673
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctct 131  Q
    |||||||||||||||||| | ||||| |||||| |||||||||| |||||||    
T  14531622 agaaatgatatttgtacaactattttatgataacttttgtacaactttctct 14531673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 41273516 - 41273583
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||||   | ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  41273516 agaaatgatatttgtacaaacaatttgtgacaacttttgtacaactttctctctcatactcacatgat 41273583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 41293791 - 41293724
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||| |||| | | ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  41293791 agaaatgatatttttacaaccaatttgtgacaacttttgtacaactttctctctcatactcacatgat 41293724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 3946241 - 3946303
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| || |||||| |||| ||||||||||| |||||    
T  3946241 agaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactca 3946303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 5277774 - 5277712
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| ||  |||| ||||||||||||||||| |||||    
T  5277774 agaaatgatatttgaacatccattttgtgacaacctttgctacaattttctctctcatactca 5277712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 28623181 - 28623115
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||| | ||| |||||||| ||||  |||| ||||||| ||| ||||||||||    
T  28623181 agaaatgatatttgtacaaccattatgtgataactttttgacaactttctctttcatactcatatga 28623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 34718116 - 34718178
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||||||| |||||    
T  34718116 agaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctcatactca 34718178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34838340 - 34838279
Alignment:
Q  80 agaaatgatatttgtacatc-aattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| |||||||| | || ||||||||||| |||||||||| |||||    
T  34838340 agaaatgatatttgtacatccaattttgt-acaacttttgtacaatcttctctctcatactca 34838279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 41520969 - 41521031
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    |||||||||||||| ||||| |||| ||||||| |||||  |||||||||||||||| |||||    
T  41520969 agaaatgatatttgaacatccatttagtgataacttttgcaacaattttctctctcatactca 41521031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 9985748 - 9985687
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||| ||| || |||| |||||  |||||||||| |||||    
T  9985748 agaaatgatatttgtacatctattttatgacaacttttatacaacattctctctcatactca 9985687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 18549980 - 18550044
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    ||||||||||||||||| |||| |||||| |||| ||||||||||  |||||||||| ||||||||    
T  18549980 agaaatgatatttgtacaatcatttttgt-ataacttttgtacaacattctctctcatactcatat 18550044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 20288534 - 20288595
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || |||||||||  ||||||||||| |||||    
T  20288534 agaaatgatatttgtacaaccaatttgtgacaacttttgtacatctttctctctcatactca 20288595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 21075163 - 21075224
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || |||||||||  ||||||||||| |||||    
T  21075163 agaaatgatatttgtacaaccaatttgtgacaacttttgtacatctttctctctcatactca 21075224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 22836209 - 22836148
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||   | ||||||||||||| ||||||||||| |||||    
T  22836209 agaaatgatatttgtacaaccattttcatacaaattttgtacaactttctctctcatactca 22836148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 23952495 - 23952544
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttct 129  Q
    ||||||||||||||||||   |||||||||| | ||||||||||||||||    
T  23952495 agaaatgatatttgtacaattattttgtgatgacttttgtacaattttct 23952544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 27630898 - 27630959
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||| ||| || ||||  |||| ||||||||||| |||||    
T  27630898 agaaatgatatttgtacatccattttatgacaattttttgacaactttctctctcatactca 27630959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 32725850 - 32725789
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | |||||||||| ||||  |||||||| ||||||| |||||    
T  32725850 agaaatgatatttgtacaaccactttgtgataatttttagacaattttttctctcatactca 32725789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 40459832 - 40459771
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||| ||||||||| | ||||||  |||| |||||||||| ||||||||||| |||||    
T  40459832 agaaatgaaatttgtacaactattttggtataacttttgtacaactttctctctcatactca 40459771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 42688428 - 42688492
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||| ||||||||||||| ||| |||||| |||| ||||||| |||||||||||||| ||||||||    
T  42688428 agaattgatatttgtacaatcatttttgt-ataacttttgtataattttctctctcatactcatat 42688492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 43605723 - 43605662
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||  ||||||||||| ||| || | ||||||||| |||||||||| |||||    
T  43605723 agaaatgatatttaaacatcaattttatgacaactgttgtacaatcttctctctcatactca 43605662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 3650114 - 3650178
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | | ||||| |||| ||||  |||| ||||||||||| ||||||||    
T  3650114 agaaatgatatttgtacaaccaatttgtaataattttttaacaactttctctctcatactcatat 3650178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 20896057 - 20895997
Alignment:
Q  87 atatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||| | ||||||||| || ||| |||||| ||||||||||| ||||| |||||    
T  20896057 atatttgtacaaccattttgtgacaattttggtacaactttctctctcatactcacatgat 20895997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 39359743 - 39359803
Alignment:
Q  86 gatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||| | ||||| ||| || ||||| |||||||||||||||| ||||| ||||    
T  39359743 gatatttgtacaaccattttctgacaatttttggacaattttctctctcatactcacatga 39359803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 44061716 - 44061780
Alignment:
Q  78 taagaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||||| ||| | ||||| |||||| |||||| |||| ||||||||||| |||||    
T  44061716 taagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactca 44061780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 13553148 - 13553217
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    |||||||||||||||||| | | |||||||||| ||||| |||||||||||||||| |||||||| ||||    
T  13553148 agaaatgatatttgtacaaccactttgtgataatttttggacaattttctctctcatactcatattatat 13553217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 3091742 - 3091803
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||||||||| ||||  |||||||||||||||| |||||    
T  3091742 agaaatgatatttgtacaactattttgtgataactttttgacaattttctctctcatactca 3091803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 6884911 - 6884978
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | |||||||||| |||| ||||| ||||||||||| ||||| |||||    
T  6884911 agaaatgatatttgtacaactaatttgtgataacttttatacaactttctctctcatactcacatgat 6884978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 29893611 - 29893678
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | |||||||||| |||||||||| ||||||||| | ||||| |||||    
T  29893611 agaaatgatatttgtacaactaatttgtgataacttttgtacaactttctctcttatactcacatgat 29893678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 34144621 - 34144554
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  34144621 agaaatgatatttgtacaaccaatttgtgacaatttttgtacaactttctctctcatactcacatgat 34144554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 35171296 - 35171229
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | ||||||||| || ||| |||||| ||||||||||| ||||| |||||    
T  35171296 agaaatgatatttgtacaaccattttgtgacaattttggtacaactttctctctcatactcacatgat 35171229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 36383463 - 36383530
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||||   ||||||||| || |||||||||| ||||||||||| ||||| |||||    
T  36383463 agaaatgatatttgtacaaagattttgtgacaacttttgtacaactttctctctcatactcacatgat 36383530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 44484726 - 44484659
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | ||||||| | || |||||||||| ||||||||||| ||||| |||||    
T  44484726 agaaatgatatttgtacaaccattttgtaacaatttttgtacaactttctctctcatactcacatgat 44484659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 9384370 - 9384440
Alignment:
Q  74 aaattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||| ||||||||||||||||||| | |||||   |||| |||||||||| ||||||||||| ||||||||    
T  9384370 aaataaagaaatgatatttgtacaactatttttacataatttttgtacaactttctctctcatactcatat 9384440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 18508079 - 18508140
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||| |||||| ||||||| ||  |||||||||| |||||    
T  18508079 agaaatgatatttgtacatccattttatgataacttttgtataacattctctctcatactca 18508140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34139108 - 34139047
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| | |||||||||| ||||  |||||||| ||||||| |||||    
T  34139108 agaaatgatatttgtacatctactttgtgataattttttgacaattttatctctcatactca 34139047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 34373006 - 34373067
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||  |||| |||||||||| ||||||||||| |||||    
T  34373006 agaaatgatatttgtacaaccattttggtataatttttgtacaactttctctctcatactca 34373067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 3196157 - 3196090
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| ||||||| |||| || |||||||||| ||||||||||| ||||| |||||    
T  3196157 agaaatgatatttgtacaatcaattt-gtgacaacttttgtacaactttctctctcatactcacatgat 3196090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 10288151 - 10288215
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | |||||||||||| ||||  |||| ||| ||||||| ||||||||    
T  10288151 agaaatgatatttgtacaactattttgtgataatttttagacaactttttctctcatactcatat 10288215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 14233788 - 14233724
Alignment:
Q  81 gaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactcatat 144  Q
    ||||||||||||| ||||| ||||||||| || |||||| |||| ||||||||||| ||||||||    
T  14233788 gaaatgatatttgaacatccattttgtgacaacttttgtgacaaatttctctctcatactcatat 14233724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 27307301 - 27307234
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| ||||||| |||| || |||||||||| ||||||||||| ||||| |||||    
T  27307301 agaaatgatatttgtacaatcaattt-gtgacaacttttgtacaactttctctctcatactcacatgat 27307234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 38246821 - 38246754
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| ||||||| |||| || ||||||| || ||||||||||| |||||||||||    
T  38246821 agaaatgatatttgtacaatcaattt-gtgacaatttttgtagaactttctctctcatactcatatgat 38246754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 6328668 - 6328723
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||| | ||||||  |||| |||||||||| |||||||||||    
T  6328668 agaaatgatatttgtacaaccattttggtataatttttgtacaactttctctctca 6328723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 14954669 - 14954614
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||||  ||||||||| || ||||| |||| |||||||||||    
T  14954669 agaaatgatatttgtacatacattttgtgacaacttttgaacaactttctctctca 14954614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 36909913 - 36909846
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | ||||||||| || ||||| |||| |||||||| || ||||| |||||    
T  36909913 agaaatgatatttgtacaaccattttgtgacaacttttggacaactttctctcacatactcacatgat 36909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 5954553 - 5954499
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctc 134  Q
    |||||||||||||||||| | ||| |||||||| ||||| |||| ||||||||||    
T  5954553 agaaatgatatttgtacaaccattatgtgataacttttggacaactttctctctc 5954499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 9695131 - 9695065
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||| | ||| || ||||| ||||| |||| ||||||||||| ||||| ||||    
T  9695131 agaaatgatatttgtacaaccattatgagataatttttggacaactttctctctcatactcacatga 9695065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 18723595 - 18723657
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||||||| |||||    
T  18723595 agaaatgatatttgaacatccattttgtgacaatttttgttacaactttctctctcatactca 18723657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 26321768 - 26321706
Alignment:
Q  79 aagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||||| | |||||||||||| ||||  ||||||| |||| ||| |||||    
T  26321768 aagaaatgatatttgtacaaccattttgtgataactttttgacaatttcctctatcatactca 26321706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 26321936 - 26321874
Alignment:
Q  79 aagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||||| | |||||||||||| ||||  ||||||| |||| ||| |||||    
T  26321936 aagaaatgatatttgtacaaccattttgtgataactttttgacaatttcctctatcatactca 26321874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 29168726 - 29168792
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||| | ||||| ||| || ||||| |||| ||||||||||| ||||| ||||    
T  29168726 agaaatgatatttgtacaaccattttttgacaacttttgcacaactttctctctcatactcacatga 29168792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 33030174 - 33030104
Alignment:
Q  79 aagaaatgatatttgtacatca-attttgtgataaattttgtacaattttctctctcacactcatatgata 148  Q
    ||||||||||||||||||| |  |||||||||||| ||||  |||| ||||||||||  ||||||||||||    
T  33030174 aagaaatgatatttgtacaacccattttgtgataattttttgacaactttctctctcgtactcatatgata 33030104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 35589457 - 35589395
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| || |||||  |||||||||||||||| |||||    
T  35589457 agaaatgatatttgaacatccattttgtgacaacttttgcaacaattttctctctcatactca 35589395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 36802897 - 36802959
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||||||| |||||    
T  36802897 agaaatgatatttgaacatccattttgtgacaacttttgctacaactttctctctcatactca 36802959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 7502498 - 7502433
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | ||||| ||| || |||||| |||| ||||||||||| ||||||||    
T  7502498 agaaatgatatttgtacaaccattttttgacaatttttgtgacaactttctctctcatactcatat 7502433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 8352836 - 8352897
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||| | |||| ||||  |||||||||||||||| |||||    
T  8352836 agaaatgatatttgtacaactattttttaataacttttagacaattttctctctcatactca 8352897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 13347888 - 13347823
Alignment:
Q  77 ttaagaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    ||||||||||||||||| ||||| ||||||||| || |||||  |||| ||||||||||| |||||    
T  13347888 ttaagaaatgatatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactca 13347823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 14713987 - 14714048
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||||||||| ||| || ||||  ||||  |||||||||| |||||    
T  14713987 agaaatgatatttgtacatcaattttatgacaacttttaaacaacattctctctcatactca 14714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 28165130 - 28165191
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||| ||||||| | ||||||||| || ||||  |||||||||||||||| |||||    
T  28165130 agaaatgatacttgtacaaccattttgtgacaacttttagacaattttctctctcatactca 28165191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 30192421 - 30192352
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    ||||||||||||||| ||   ||||||| | || ||||| |||||||||||||||| ||||| |||||||    
T  30192421 agaaatgatatttgttcaatcattttgtaaaaatttttgaacaattttctctctcatactcacatgatat 30192352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 40721772 - 40721833
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||  | || |||||||||| ||||||||||| |||||    
T  40721772 agaaatgatatttgtacagccattttggtacaacttttgtacaactttctctctcatactca 40721833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 7428434 - 7428491
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||    ||||| ||||||||||||||||| |||||    
T  7428434 agaaatgatatttgtacaactattttgtg----attttttacaattttctctctcatactca 7428491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 20534121 - 20534069
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctc 132  Q
    |||||||||||||| ||| | |||||||||||| | ||| |||||||||||||    
T  20534121 agaaatgatatttgcacaaccattttgtgataattgttgaacaattttctctc 20534069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 44712065 - 44711997
Alignment:
Q  74 aaattaagaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    ||||| |||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||| ||| |||||    
T  44712065 aaattgagaaatgatatttgaacatccattttgtgacaatttttgctacaactttctctttcatactca 44711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 38010873 - 38010940
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||| |||||    
T  38010873 agaaatgatatttgtacaatcaa-tttgtgataacttttgtacaattttctctctcatactcacatgat 38010940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 30420627 - 30420682
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||||    
T  30420627 agaaatgatatttgtacatccattttatgataatttttgtacaatcttctctctca 30420682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 582946 - 582868
Alignment:
Q  71 aacaaattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    |||||||  ||||||||||||| |||| | |||||||||||| ||||  |||||||||||||||| |||||||| ||||    
T  582946 aacaaatagagaaatgatatttttacaactattttgtgataacttttaaacaattttctctctcatactcatattatat 582868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 11464190 - 11464125
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||| | | |||||||||| |||||||||||||||| ||||| ||||| |||||    
T  11464190 aaatgatatttgtacaaccaatttgtgataacttttgtacaattttctttctcatactcacatgat 11464125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 3263583 - 3263511
Alignment:
Q  75 aattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||| |||||||||||||||||| | | ||||||| || |||||||||||||| ||||||| ||||| |||||    
T  3263583 aattgagaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttttctctcatactcacatgat 3263511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 9594479 - 9594546
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  9594479 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcacatgat 9594546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 9599798 - 9599731
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  9599798 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcacatgat 9599731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 30574447 - 30574380
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  30574447 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcacatgat 30574380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 8675503 - 8675441
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    |||||||||||||| ||||| |||||||||||| |||||  |||||||||||||||| |||||    
T  8675503 agaaatgatatttgaacatccattttgtgataacttttgcaacaattttctctctcatactca 8675441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 7144578 - 7144647
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    |||||||||||||||||| | ||||| |||||| ||||  |||| ||||||||||| |||||||| ||||    
T  7144578 agaaatgatatttgtacaaccattttatgataacttttaaacaactttctctctcatactcatattatat 7144647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 27440480 - 27440541
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||||   ||||||||| || ||||| |||||||||||||||| |||||    
T  27440480 agaaatgatatttgtacaatcattttgtgacaacttttgaacaattttctctctcatactca 27440541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 35814454 - 35814515
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||||||||| ||| |||||| ||||| ||||| |||||    
T  35814454 agaaatgatatttgtacaaccattttgtgataactttggtacaactttctttctcatactca 35814515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 3154710 - 3154658
Alignment:
Q  83 aatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||| | ||||| |||||| |||||||||| |||||||||||    
T  3154710 aatgatatttgtacaactattttatgataacttttgtacaactttctctctca 3154658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 4820156 - 4820220
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||||| ||||| ||| |  ||||||||||  |||||||||| ||||||||    
T  4820156 agaaatgatatttgtacatccattttatgacatcttttgtacaaccttctctctcatactcatat 4820220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 17489351 - 17489415
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||| | ||||| |||||| ||||  |||||||||||||||| ||||| ||||    
T  17489351 aaatgatatttgtacaactattttttgataatttttacacaattttctctctcatactcacatga 17489415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 18511866 - 18511810
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctca 135  Q
    |||||||||||||| ||||  |||||||||||| ||||| |||||||||||||||||    
T  18511866 agaaatgatatttgaacattcattttgtgataatttttgctacaattttctctctca 18511810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 30103521 - 30103466
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||| ||| |||||| |||| ||||||||||||||||||||||    
T  30103521 agaaatgatatttgtacaatcatttttgt-ataatttttgtacaattttctctctca 30103466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 36624320 - 36624380
Alignment:
Q  81 gaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||||  | |||||||||| ||||  |||||||||||||||| |||||    
T  36624320 gaaatgatatttgtacattcactttgtgataacttttagacaattttctctctcatactca 36624380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 4954467 - 4954534
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||||   | ||||||| || || ||||||| ||||||||||| |||||||||||    
T  4954467 agaaatgatatttgtacaattaatttgtgacaacttatgtacaactttctctctcatactcatatgat 4954534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 10232500 - 10232555
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||||||| ||||||||||  |||  |||| |||||||||||    
T  10232500 agaaatgatatttgtacatcaactttgtgataaccttttgacaactttctctctca 10232555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 22920562 - 22920495
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||| ||||||||||| | ||||||| | |||||||| |||| ||||||||||| ||||| |||||    
T  22920562 agaaataatatttgtacaaccattttgtaacaaattttggacaactttctctctcatactcacatgat 22920495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 189773 - 189711
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||| |||||| |||||| |||| ||||||||||| |||||    
T  189773 agaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactca 189711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 8920079 - 8920141
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| || |||||| |||| ||||||||||| |||||    
T  8920079 agaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactca 8920141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 12662022 - 12661956
Alignment:
Q  75 aattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||| |||||||||||||||||||| | ||||||| || ||||  |||| ||||||||||| |||||    
T  12662022 aattgagaaatgatatttgtacatccactttgtgacaattttttgacaactttctctctcatactca 12661956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 19481252 - 19481190
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||| |||||| |||||| |||| ||||||||||| |||||    
T  19481252 agaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactca 19481190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 32912039 - 32912101
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||  ||||| |||||| |||||| |||||||||||||||| |||||    
T  32912039 agaaatgatatttgaacattcattttatgataatttttgtgacaattttctctctcatactca 32912101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 34124622 - 34124684
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||| |||||| |||||| | |||||||||||||| |||||    
T  34124622 agaaatgatatttgaacatccattttatgataatttttgtgataattttctctctcatactca 34124684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34693286 - 34693225
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| ||| |||||| |||| ||||||||||| |||||||||| |||||    
T  34693286 agaaatgatatttgtacaatcatttttgt-ataatttttgtacaatcttctctctcatactca 34693225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 39788776 - 39788710
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||| | ||| ||||| || ||||| |||| ||||||||||| ||||| ||||    
T  39788776 agaaatgatatttgtacaaccattatgtgacaacttttggacaactttctctctcatactcacatga 39788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 41175776 - 41175714
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| |||||| ||||| |||||| |||| ||||||||||| |||||    
T  41175776 agaaatgatatttgaacatctattttgggataacttttgtgacaactttctctctcatactca 41175714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 20985599 - 20985538
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||   |||| |||||||||| ||||||||||| |||||    
T  20985599 agaaatgatatttgtacaaccatttttgtataatttttgtacaactttctctctcatactca 20985538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 26660481 - 26660420
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||||||| || || |  |||| ||||||||||| |||||    
T  26660481 agaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatactca 26660420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 26932073 - 26932012
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||||||| || || |  |||| ||||||||||| |||||    
T  26932073 agaaatgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatactca 26932012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 29765831 - 29765892
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||   | || |||||||||| |||||||||||||||||    
T  29765831 agaaatgatatttgtacaaccattttagtacaacttttgtacaactttctctctcacactca 29765892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 35098802 - 35098733
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    |||||||||||||||||| | ||||| ||||||  |||  |||||||| ||||||| |||||||| ||||    
T  35098802 agaaatgatatttgtacaaccattttttgataacatttaaacaattttttctctcatactcatattatat 35098733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 1774353 - 1774289
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||||| | ||||||| || || |  |||| ||||||||||| ||||||||    
T  1774353 agaaatgatatttgtacatctactttgtgacaacttcttgacaactttctctctcatactcatat 1774289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 24330052 - 24329988
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    ||||||||||||||||||   ||||||  | || |||||||||| ||||||||||| ||||||||    
T  24330052 agaaatgatatttgtacaattattttggtacaacttttgtacaactttctctctcatactcatat 24329988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 25871516 - 25871460
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctca 135  Q
    |||||||||||||| ||||| ||||||||| || ||||| || ||||||||||||||    
T  25871516 agaaatgatatttgaacatccattttgtgacaatttttgctataattttctctctca 25871460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 30640791 - 30640847
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctca 135  Q
    |||||||||||||| ||||| ||||||||| || ||||| ||||| |||||||||||    
T  30640791 agaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctca 30640847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 32634709 - 32634776
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| ||||| | |||| || |||||||||| ||||||||||| ||||| |||||    
T  32634709 agaaatgatatttgtacaatcaatct-gtgacaacttttgtacaactttctctctcatactcacatgat 32634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 36581535 - 36581471
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | | |||||||||| ||||  |||| ||||||||| | ||||||||    
T  36581535 agaaatgatatttgtacaaccactttgtgataatttttagacaactttctctcttatactcatat 36581471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 38500944 - 38501008
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | ||||||||| || ||||  |||| ||||||| ||| ||||||||    
T  38500944 agaaatgatatttgtacaaccattttgtgacaattttttgacaactttctctttcatactcatat 38501008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 2482753 - 2482689
Alignment:
Q  71 aacaaattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||| |||||||||||||||||||| ||||||||| || ||||| |||| |||||||||||    
T  2482753 aacaaattgagaaatgatatttgtacatccattttgtgacaacttttgaacaactttctctctca 2482689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 11327109 - 11327176
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | ||||||||| || |||||||||| ||||||||||| ||||| |||||    
T  11327109 agaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacatgat 11327176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 30400226 - 30400165
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| ||| ||||||| || |||||||||| ||||||||||| |||||    
T  30400226 agaaatgatatttgtacaacaaatttgtgacaacttttgtacaactttctctctcatactca 30400165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 38944211 - 38944150
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || |||||||||||||||||||||| |||||    
T  38944211 agaaatgatatttgtacaactaatttgtgacaacttttgtacaattttctctctcatactca 38944150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 50025768 - 50025707
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||  ||||||||||||||| ||||||||||| |||||    
T  50025768 agaaatgatatttgtacaaccattttggtataaattttgtacaactttctctctcatactca 50025707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 7351708 - 7351644
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | |||||   |||| |||||||||||||||||||||| ||||||||    
T  7351708 agaaatgatatttgtacaaccatttttgtataatttttgtacaattttctctctcatactcatat 7351644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 48944780 - 48944716
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | ||||| | | || |||||||||||||||||||||| ||||||||    
T  48944780 agaaatgatatttgtacaaccattttctaacaacttttgtacaattttctctctcatactcatat 48944716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 8254028 - 8254095
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | ||||||||| || ||| |||||| ||||||||||| ||||| |||||    
T  8254028 agaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacatgat 8254095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 32931988 - 32931921
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  32931988 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcacatgat 32931921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 39697293 - 39697230
Alignment:
Q  79 aagaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    ||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||| |||||    
T  39697293 aagaaatgatatttgaacatccattttgtgataatttttgtaacaactttctctctcatactca 39697230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 46344415 - 46344482
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||| | || |||||||||||||||||||||| | |||||||||    
T  46344415 agaaatgatatttgtacaactaatttgttacaatttttgtacaattttctctctcatattcatatgat 46344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 47141676 - 47141609
Alignment:
Q  74 aaattaagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||| |||||||||||||||||| | ||||||  |||| |||||||||| ||||||||||| |||||    
T  47141676 aaattgagaaatgatatttgtacaaccattttggtataatttttgtacaactttctctctcatactca 47141609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 48205046 - 48205107
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| ||| |||||| |||| |||||||||||||||||||||| |||||    
T  48205046 agaaatgatatttgtacaatcatttttgt-ataatttttgtacaattttctctctcatactca 48205107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 1295333 - 1295394
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||||||||| ||||| |||| ||| ||||||| |||||    
T  1295333 agaaatgatatttgtacaactattttgtgataacttttggacaactttttctctcatactca 1295394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 1402651 - 1402712
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||| ||| || ||||||||||  |||||||||| |||||    
T  1402651 agaaatgatatttgtacatccattttatgacaacttttgtacaaccttctctctcatactca 1402712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 18741119 - 18741180
Alignment:
Q  81 gaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    ||||||||||||| ||||||||||| |||||| |||||| |||||||||||| ||| |||||    
T  18741119 gaaatgatatttgaacatcaattttttgataatttttgtaacaattttctctttcatactca 18741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 29525234 - 29525295
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||  ||||| ||| || ||||||||||| |||||||||| |||||    
T  29525234 agaaatgatatttgtacattcattttatgacaacttttgtacaatattctctctcatactca 29525295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 35376621 - 35376552
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    |||||||||||||||||| | ||||||||| || ||||  |||| ||||||||||| |||||||| ||||    
T  35376621 agaaatgatatttgtacaaccattttgtgacaatttttagacaactttctctctcatactcatattatat 35376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 36818957 - 36819018
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| |||||    
T  36818957 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactca 36819018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 44910698 - 44910759
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||  ||||| |||||| ||||||| ||| |||||||||| |||||    
T  44910698 agaaatgatatttgtacattcattttatgataacttttgtataatcttctctctcatactca 44910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 49761256 - 49761195
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||| | | || |||||||||| |||||||||||||||||    
T  49761256 agaaatgatatttgtacaaccattttctaacaatttttgtacaactttctctctcacactca 49761195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 53718050 - 53718118
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    |||||||||||||  ||||| ||||||||| || ||||| |||| ||||||||||| |||||||||||||    
T  53718050 agaaatgatatttaaacatccattttgtgacaacttttg-acaactttctctctcatactcatatgatat 53718118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 53932461 - 53932392
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    |||||||||||||||||| | ||||||||| || ||||| |||| |||| |||||| ||||| |||||||    
T  53932461 agaaatgatatttgtacaaccattttgtgacaatttttggacaactttcactctcatactcacatgatat 53932392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 3347192 - 3347136
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctca 135  Q
    |||||||||||||| ||||| |||||||||||| ||||| ||||| |||||||||||    
T  3347192 agaaatgatatttgaacatccattttgtgataacttttgctacaactttctctctca 3347136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 38471644 - 38471704
Alignment:
Q  81 gaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||| | ||||||  | || |||||||||||||||||||||| |||||    
T  38471644 gaaatgatatttgtacaaccattttggtacaacttttgtacaattttctctctcatactca 38471704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 13159662 - 13159729
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||| ||||||   | ||||||| || |||||||||| ||||||||||| |||||||||||    
T  13159662 agaaatgatatctgtacaattaatttgtgacaacttttgtacaactttctctctcatactcatatgat 13159729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 20549455 - 20549400
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||||| ||||| |||||| ||||||| ||  ||||||||||    
T  20549455 agaaatgatatttgtacatctattttatgataatttttgtataacattctctctca 20549400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 20714244 - 20714311
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || || ||||||| ||||||||||| ||||| |||||    
T  20714244 agaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctctcatactcacatgat 20714311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 37754448 - 37754503
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||||| ||||| | |||| ||||| |||| |||||||||||    
T  37754448 agaaatgatatttgtacatctattttataataatttttggacaactttctctctca 37754503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 40419712 - 40419657
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||||||   |||||||||||| ||||  ||||||||||||||||    
T  40419712 agaaatgatatttgtacaatcattttgtgataatttttagacaattttctctctca 40419657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 50879596 - 50879663
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | |  |||||| || |||||||||| ||||||||||| ||||| |||||    
T  50879596 agaaatgatatttgtacaactaaattgtgacaacttttgtacaactttctctctcatactcacatgat 50879663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 24095476 - 24095414
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||| |||||| |||||| |||| ||||||||||| |||||    
T  24095476 agaaatgatatttgaacatccattttatgataatttttgtgacaactttctctctcatactca 24095414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34058023 - 34057961
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||| |||||| |||||| |||| ||||||||||| |||||    
T  34058023 agaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactca 34057961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 43904974 - 43905036
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| |||| ||||||| |||||| |||| ||||||||||| |||||    
T  43904974 agaaatgatatttgaacatccatttagtgataatttttgtaacaactttctctctcatactca 43905036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 48352997 - 48353067
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactcatatgatat 149  Q
    |||||||||||||||||||| ||||| | | || |||||| |||| ||||||||||| |||||||| ||||    
T  48352997 agaaatgatatttgtacatccattttttaacaacttttgtgacaactttctctctcatactcatattatat 48353067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 48405411 - 48405473
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||| || |||||| |||| ||||||||||| |||||    
T  48405411 agaaatgatatttgtacaaccattttgtgacaacttttgtaacaactttctctctcatactca 48405473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 462471 - 462410
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||| || ||||  |||| ||||||||||| |||||    
T  462471 agaaatgatatttgtacaaccattttgtgacaacttttagacaactttctctctcatactca 462410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 2280178 - 2280239
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||   | || |||||||||| |||||||||||||||||    
T  2280178 agaaatgatatttgtacaaccattttagtacaacttttgtacaactttctctctcacactca 2280239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 7867781 - 7867720
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||| || ||||  |||||||||| ||||| |||||    
T  7867781 agaaatgatatttgtacaactattttgtgacaacttttaaacaattttctttctcatactca 7867720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 9557992 - 9557931
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||| |||| ||||||||  | || |||||||||| ||||||||||| |||||    
T  9557992 agaaatgatatttatacaacaattttgatacaatttttgtacaactttctctctcatactca 9557931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 16139363 - 16139310
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||| ||||||||||| | ||||| |||||| ||||| ||||||||||||||||    
T  16139363 aaataatatttgtacaaccattttatgataacttttgaacaattttctctctca 16139310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 27198230 - 27198161
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    ||||||||||||||||||   ||||| |||||| ||||  |||||||| ||||||| |||||||| ||||    
T  27198230 agaaatgatatttgtacaatcattttttgataacttttaaacaattttatctctcatactcatattatat 27198161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 141
Target Start/End: Complemental strand, 29573433 - 29573364
Alignment:
Q  73 caaattaagaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||| |||||||||||||||||| | ||||||| | || |||||| |||| ||||||||||| |||||    
T  29573433 caaattgagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttctctctcatactca 29573364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 44855252 - 44855313
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||| | | ||||||||| || ||||||| || ||||||||||| |||||    
T  44855252 agaaatgatatttgtataactattttgtgacaacttttgtataactttctctctcatactca 44855313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 49196697 - 49196758
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||| || |||   |||||||||||||||| |||||    
T  49196697 agaaatgatatttgtacaaccattttgtgacaactttgtgacaattttctctctcatactca 49196758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 22371192 - 22371248
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctca 135  Q
    |||||||||||||| ||||| |||| ||||||| |||||| | ||||||||||||||    
T  22371192 agaaatgatatttgaacatccatttagtgataacttttgtaataattttctctctca 22371248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 25559705 - 25559769
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||| | ||||||  |||| |||| ||||| ||||||||||| | ||||||    
T  25559705 agaaatgatatttgtacaaccattttggtataatttttatacaactttctctctcatattcatat 25559769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 42683828 - 42683880
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctct 131  Q
    |||||||||||||| ||||  |||||||||||| ||||| |||||||||||||    
T  42683828 agaaatgatatttgaacattcattttgtgataatttttgttacaattttctct 42683880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 50559282 - 50559226
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctca 135  Q
    |||||||||||||||||| | ||||| ||| || |||||| ||||||||||||||||    
T  50559282 agaaatgatatttgtacaactattttttgacaacttttgtgacaattttctctctca 50559226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 53102972 - 53102905
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||| |||||||| |||| || |||| ||||| ||||||||||| ||||| |||||    
T  53102972 agaaatgatatttgtacgatcaattt-gtgacaacttttatacaactttctctctcatactcacatgat 53102905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 53473611 - 53473666
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||| ||| |||||||    
T  53473611 agaaatgatatttgtacaatcaa-tttgtgataacttttgtacaactttttctctca 53473666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 55344366 - 55344306
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactc 140  Q
    |||||||||||||||||| | |||||||||||| || |  |||||||||||| ||| ||||    
T  55344366 agaaatgatatttgtacaaccattttgtgataacttcttgacaattttctctttcatactc 55344306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 18596 - 18663
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | |||||||||| |||||||||| ||||||||||| ||||| |||||    
T  18596 agaaatgatatttgtacaaccaatttgtgataacttttgtacaactttctctctcatactcacatgat 18663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 2574 - 2508
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||||| ||| |||||||| ||||| |||| ||||||||||| ||||| ||||    
T  2574 agaaatgatatttgtacatctattatgtgataatttttggacaactttctctctcatactcacatga 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 3339569 - 3339503
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||| | ||||||||| || |||||||||| ||||||||||| ||||| ||||    
T  3339569 agaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacatga 3339503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 7577257 - 7577189
Alignment:
Q  79 aagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||||||| ||||| | |||| ||||| | ||||| |||||||| |||||||||||    
T  7577257 aagaaatgatatttgtacatctattttataataatttttggataatttactctctcatactcatatgat 7577189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 3088974 - 3089035
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||| |||| || ||||  ||||||||||||||||||||||    
T  3088974 agaaatgatatttgtacaaccatttagtgacaacttttagacaattttctctctcacactca 3089035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 25995443 - 25995504
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||  || |||||||||| ||||||||||| |||||    
T  25995443 agaaatgatatttgtacaaccattttgtggcaatttttgtacaactttctctctcatactca 25995504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 2056784 - 2056851
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||| | ||||||||||| ||||| |||||    
T  2056784 agaaatgatatttgtacaaccaatttgtgacaacttttgtactactttctctctcatactcacatgat 2056851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 3660423 - 3660356
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||| ||||||||||| | | ||||||| || |||||||||||||| ||||||| ||||| |||||    
T  3660423 agaaattatatttgtacaaccaatttgtgacaacttttgtacaattttttctctcatactcacatgat 3660356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 3401087 - 3401149
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||| | |||||||||||| ||||| || ||||| ||| ||| ||||||||    
T  3401087 aaatgatatttgtacaactattttgtgataatttttgaacgattttttctttcatactcatat 3401149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 29197727 - 29197789
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||| |||||||||||   |||||||||||| ||||| |||||||||||||||| | ||||||    
T  29197727 aaataatatttgtacaatcattttgtgataatttttggacaattttctctctcatattcatat 29197789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 35213631 - 35213569
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| || |||||| |||| ||||||||||| |||||    
T  35213631 agaaatgatatttgaacatctattttgtgacaacttttgtaacaactttctctctcatactca 35213569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 25554246 - 25554307
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||  || |||| ||||| ||||||||||| |||||    
T  25554246 agaaatgatatttgtacaaccattttgtggcaatttttttacaactttctctctcatactca 25554307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 26094906 - 26094967
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||  || |||||||||| ||| ||||||| |||||    
T  26094906 agaaatgatatttgtacaaccattttgtggcaatttttgtacaactttatctctcatactca 26094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 28965910 - 28965841
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgatat 149  Q
    |||||||||||||||||| | ||||||| | || ||||  |||| ||||||||||| ||||| |||||||    
T  28965910 agaaatgatatttgtacaaccattttgttacaactttttgacaactttctctctcatactcacatgatat 28965841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 32729890 - 32729951
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||| ||| || |||| ||||| ||||||||||| |||||    
T  32729890 agaaatgatatttgtacaaccattttctgacaacttttatacaactttctctctcatactca 32729951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 15318258 - 15318202
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctca 135  Q
    |||||||||||||| ||||| ||||||||| || ||||| ||||| |||||||||||    
T  15318258 agaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctca 15318202  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 34570663 - 34570603
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||||| | ||||||| |||| |||||| |||| ||||||||||| |||||    
T  34570663 aaatgatatttgtacaaccattttgtaataacttttgtgacaactttctctctcatactca 34570603  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 7037554 - 7037493
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || |||||||||||||||||||||| |||||    
T  7037554 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctctctcatactca 7037493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 45521649 - 45521585
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||||| ||||| ||| || ||||||||||  |||||||||| ||||||||    
T  45521649 agaaatgatatttgtacatccattttatgacaacttttgtacaaccttctctctcatactcatat 45521585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 1796367 - 1796422
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||| | | ||||||| || ||||||||||||||||||||||    
T  1796367 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctctctca 1796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 40722034 - 40721967
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||||| ||||| | |||| ||||| |||| ||||||||||| ||||| |||||    
T  40722034 agaaatgatatttgtacatccattttataataatttttggacaactttctctctcatactcacatgat 40721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 33484175 - 33484121
Alignment:
Q  83 aatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcaca 137  Q
    ||||||||||||||| | |||||||||||| ||||| |||| |||||||||||||    
T  33484175 aatgatatttgtacaaccattttgtgataatttttggacaactttctctctcaca 33484121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 4100825 - 4100764
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||| || | ||||||||| |  |||||||||||||||||||||| |||||    
T  4100825 agaaatgatatttgttcaaccattttgtgacaccttttgtacaattttctctctcatactca 4100764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 5208397 - 5208336
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||||||||||| |||||    
T  5208397 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactca 5208336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 18880786 - 18880847
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||| |||||| ||||||| |||||| ||||  |||||||||||||||| |||||    
T  18880786 agaaatgatatatgtacaacaattttatgataacttttagacaattttctctctcatactca 18880847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 23347776 - 23347837
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| | ||||||| || ||||  |||||||||||||||| |||||    
T  23347776 agaaatgatatttgtacatccactttgtgacaactttttaacaattttctctctcatactca 23347837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 31240649 - 31240710
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | |||||||||| |||| ||||| ||||||||||| |||||    
T  31240649 agaaatgatatttgtacaaccactttgtgataacttttttacaactttctctctcaaactca 31240710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 41609749 - 41609688
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||| ||| || |||||||||| ||| ||||||| |||||    
T  41609749 agaaatgatatttgtacatccattttatgacaacttttgtacaactttatctctcatactca 41609688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 47519788 - 47519723
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| ||||||| | || ||||| |||| ||||||||||| ||||| |||||    
T  47519788 aaatgatatttgtacatccattttgtaacaacttttgaacaactttctctctcatactcacatgat 47519723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 52487337 - 52487272
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||| | | |||||||||| ||||||| || ||||||||||| | |||||||||    
T  52487337 aaatgatatttgtacaactaatttgtgataatttttgtataactttctctctcatattcatatgat 52487272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 3222990 - 3223057
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||||| ||||| |||||    
T  3222990 agaaatgatatttgtacaatcaa-tttgtgacaacttttgtacaactttctctctcatactcacatgat 3223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 51887658 - 51887726
Alignment:
Q  74 aaattaagaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    ||||| |||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||||||| |||||    
T  51887658 aaattgagaaatgatatttgaacatccattttgtgacaacttttgctacaactttctctctcatactca 51887726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 55960701 - 55960761
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactc 140  Q
    |||||||||||||||| | | ||||||  |||| |||||||||||||||||||||| ||||    
T  55960701 agaaatgatatttgtataaccattttggtataacttttgtacaattttctctctcatactc 55960761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 3475870 - 3475925
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||| | ||||| ||| || |||||||||| |||||||||||    
T  3475870 agaaatgatatttgtacaaccattttatgacaacttttgtacaactttctctctca 3475925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 13267548 - 13267481
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | ||||||||| |||||||| | || |||||||| || ||||| |||||    
T  13267548 agaaatgatatttgtacaaccattttgtgacaaattttggaaaactttctctcacatactcacatgat 13267481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 27001479 - 27001412
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || || ||||||| ||||||||||| ||||| |||||    
T  27001479 agaaatgatatttgtacaaccaatttgtgacaacttctgtacaactttctctctcatactcacatgat 27001412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 47105912 - 47105967
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||||||   | |||||||||| |||||||||| |||||||||||    
T  47105912 agaaatgatatttgtacaattaatttgtgataacttttgtacaactttctctctca 47105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 51377363 - 51377296
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||| ||| ||||||||||| ||||| |||||    
T  51377363 agaaatgatatttgtacaaccaatttgtgacaacttttgtccaactttctctctcatactcacatgat 51377296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 52669679 - 52669624
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||||||   | |||||||||| |||||||||| |||||||||||    
T  52669679 agaaatgatatttgtacaaacaatttgtgataacttttgtacaactttctctctca 52669624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 53662498 - 53662443
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||||| | ||||||| | || |||||||||| |||||||||||    
T  53662498 agaaatgatatttgtacaactattttgtaacaatttttgtacaactttctctctca 53662443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 54801557 - 54801502
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||||||   ||||| | |||| ||||||||||||||||||||||    
T  54801557 agaaatgatatttgtacaatcattttattataatttttgtacaattttctctctca 54801502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 55268071 - 55268004
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||| | | ||||||| || |||||||||| ||| ||||||| ||||| |||||    
T  55268071 agaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttatctctcatactcacatgat 55268004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 8680942 - 8681008
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||| | ||| |||||||  ||||| |||| ||||||||||| ||||| ||||    
T  8680942 agaaatgatatttgtacaaccattatgtgatattttttggacaactttctctctcatactcacatga 8681008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 21617184 - 21617246
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctcacactca 141  Q
    |||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||||||| |||||    
T  21617184 agaaatgatatttgaacatccattttgtgacaatttttgttacaactttctctctcatactca 21617246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 24235321 - 24235382
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||||| |||||    
T  24235321 agaaatgatatttgtacaatcaa-tttgtgacaatttttgtacaactttctctctcatactca 24235382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 32901330 - 32901396
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    |||||||||||||||||| | ||||| |||||| ||||| |||| ||||||| ||| ||||| ||||    
T  32901330 agaaatgatatttgtacaactattttttgataatttttgcacaactttctctttcatactcacatga 32901396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 37514202 - 37514140
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||||| | || |||||| |||| ||||||||||| |||||    
T  37514202 agaaatgatatttgtacatccattttgtaacaacttttgtgacaactttctctctcatactca 37514140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 53384397 - 53384344
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctct 133  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||||||||||    
T  53384397 agaaatgatatttgtacaatcaattt-gtaataacttttgtacaattttctctct 53384344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 56557734 - 56557796
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||||| ||| ||||||| ||| || |||||| |||||||||||||||| |||||    
T  56557734 agaaatgatatttgaacaacaattttatgacaacttttgtgacaattttctctctcatactca 56557796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 1987783 - 1987722
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||   | || |||||||||| |||||||||||||||||    
T  1987783 agaaatgatatttgtacaaccattttagtacaatttttgtacaactttctctctcacactca 1987722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 2615198 - 2615137
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||  |||||  ||||| ||||||||||| |||||| ||| |||||    
T  2615198 agaaatgatatttgtacatttattttacgataatttttgtacaatattctctttcatactca 2615137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 6126854 - 6126915
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||| ||||||||||||| ||||| ||| || ||||||||||  |||||||||| |||||    
T  6126854 agaaatcatatttgtacatctattttatgacaatttttgtacaacattctctctcatactca 6126915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 31318754 - 31318815
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||  | || |||||||||| ||||||||||| |||||    
T  31318754 agaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctctcatactca 31318815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 34116610 - 34116549
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || ||||  |||||||||||||||| |||||    
T  34116610 agaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctctcatactca 34116549  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 34259816 - 34259877
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||||| || | ||| |||| ||||||||||| |||||    
T  34259816 agaaatgatatttgtacaaccattttgtgacaactgttgaacaactttctctctcatactca 34259877  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 36444465 - 36444404
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||| |||||| ||||  |||| ||||||||||| |||||    
T  36444465 agaaatgatatttgtacaaccattttatgataactttttaacaactttctctctcatactca 36444404  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 39449174 - 39449234
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||||| |||| | |||||||||||| ||||| |||||||| ||||||| |||||    
T  39449174 agaaatgatatttatacaactattttgtgataacttttg-acaattttttctctcatactca 39449234  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 40629410 - 40629349
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||| ||||  |||| |||| ||||||||||| |||||    
T  40629410 agaaatgatatttgtacaactattttgtaataacctttggacaactttctctctcatactca 40629349  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 45548856 - 45548787
Alignment:
Q  78 taagaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||||||||| | |||||||||||| ||||  |||| ||| ||| ||| ||||| |||||    
T  45548856 taagaaatgatatttgtacaaccattttgtgataattttttgacaactttttctttcatactcacatgat 45548787  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 46480574 - 46480521
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctct 133  Q
    ||||||||||||||||||   | |||||| ||| ||||||||||||||||||||    
T  46480574 agaaatgatatttgtacaattaatttgtggtaatttttgtacaattttctctct 46480521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 46566930 - 46566991
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| | ||||||| || ||||  |||| ||||||||||| |||||    
T  46566930 agaaatgatatttgtacatccactttgtgacaacttttagacaactttctctctcatactca 46566991  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 48722070 - 48722131
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| ||||||  | || ||||  |||||||||||||||| |||||    
T  48722070 agaaatgatatttgtacatccattttgcaacaactttttgacaattttctctctcatactca 48722131  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 169572 - 169520
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctc 132  Q
    |||||||||||||||||| | ||||||||| || ||||  |||||||||||||    
T  169572 agaaatgatatttgtacaaccattttgtgacaactttttgacaattttctctc 169520  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 925130 - 925066
Alignment:
Q  82 aaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatga 146  Q
    ||||||||||| |||| | ||||||||| || ||||  |||||||||||||||| ||||| ||||    
T  925130 aaatgatatttatacaaccattttgtgacaacttttagacaattttctctctcatactcacatga 925066  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 6953458 - 6953394
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatat 144  Q
    |||||||||||||||||||| | ||||||| || ||||  |||| ||| ||||||| ||||||||    
T  6953458 agaaatgatatttgtacatccactttgtgacaactttttaacaactttatctctcatactcatat 6953394  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 9032781 - 9032836
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctca 135  Q
    ||||||||||||||||| ||||| ||||||| || |||||||||| |||||||||||    
T  9032781 agaaatgatatttgtacaatcaa-tttgtgacaacttttgtacaactttctctctca 9032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 26207047 - 26206991
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttg-tacaattttctctctca 135  Q
    |||||||||||||| ||||| |||| ||||||| |||||  ||||||||||||||||    
T  26207047 agaaatgatatttgaacatccatttagtgataatttttgcaacaattttctctctca 26206991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 44368272 - 44368205
Alignment:
Q  80 agaaatgatatttgtac-atcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||| | ||||| |||||    
T  44368272 agaaatgatatttgtacaatcaa-tttgtgacaacttttgtacaactttctctcttatactcacatgat 44368205  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 54622531 - 54622567
Alignment:
Q  74 aaattaagaaatgatatttgtacatcaattttgtgat 110  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  54622531 aaattgagaaatgatatttgtacatccattttgtgat 54622567  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 88809 - 88862
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctct 133  Q
    |||||||||||||||||| | | |||||||||| |||| |||||||||||||||    
T  88809 agaaatgatatttgtacaaccaatttgtgataacttttatacaattttctctct 88862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 249212 - 249145
Alignment:
Q  80 agaaatgatatttgtaca-tcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    |||||||||||||| ||| ||||||| ||||||| |||||||||| ||||||||||| ||||| |||||    
T  249212 agaaatgatatttgcacaatcaattt-gtgataacttttgtacaactttctctctcatactcacatgat 249145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 1566 - 1511
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctca 135  Q
    |||||||||||||||| | | | ||||||| || ||||||||||||||||||||||    
T  1566 agaaatgatatttgtataaccaatttgtgacaacttttgtacaattttctctctca 1511  T

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Target: scaffold0514; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 1915 - 1854
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | |||||   |||| ||||||||||| |||||||||| |||||    
T  1915 agaaatgatatttgtacaaccatttttgtataacttttgtacaatcttctctctcatactca 1854  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 147326 - 147259
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactcatatgat 147  Q
    ||||||||||| ||||||   | ||||||| || |||||||||| ||||||||||| |||||||||||    
T  147326 agaaatgatatctgtacaattaatttgtgacaacttttgtacaactttctctctcatactcatatgat 147259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 469702 - 469646
Alignment:
Q  86 gatatttgtacatcaattttgtgataaattttgt-acaattttctctctcacactca 141  Q
    |||||||||||| | ||||| |||||| |||||| |||| |||||||||||||||||    
T  469702 gatatttgtacaaccattttttgataatttttgtgacaactttctctctcacactca 469646  T

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Target: scaffold0651 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 4916 - 4855
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | ||||||  | || |||||||||| ||||||||||| |||||    
T  4916 agaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctctcatactca 4855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 911 - 972
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||  |||| ||||||| |||||||||||||| |||||    
T  911 agaaatgatatttgtacaaccaatttgatataatttttgtataattttctctctcatactca 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 11606 - 11545
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||||| | ||||||| || || |  |||||||||||||||| |||||    
T  11606 agaaatgatatttgtacatctactttgtgacaacttcttgacaattttctctctcatactca 11545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 27340 - 27401
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    ||||||||||| |||||||| ||||||||| || ||||  |||| ||||||||||| |||||    
T  27340 agaaatgatatatgtacatccattttgtgacaattttttgacaactttctctctcatactca 27401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 15604 - 15543
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctctcacactca 141  Q
    |||||||||||||||||| | | ||||||| || ||||  |||||||||||||||| |||||    
T  15604 agaaatgatatttgtacaaccactttgtgacaactttttgacaattttctctctcaaactca 15543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 204515 - 204463
Alignment:
Q  80 agaaatgatatttgtacatcaattttgtgataaattttgtacaattttctctc 132  Q
    |||||||||||||||||||| ||||| ||| || ||||||||||  |||||||    
T  204515 agaaatgatatttgtacatctattttctgacaacttttgtacaaccttctctc 204463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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