View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0550_low_6 (Length: 380)

Name: NF0550_low_6
Description: NF0550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0550_low_6
NF0550_low_6
[»] chr3 (56 HSPs)
chr3 (39-202)||(19984846-19985010)
chr3 (40-202)||(19986010-19986175)
chr3 (31-202)||(22776752-22776924)
chr3 (41-202)||(54540730-54540892)
chr3 (40-201)||(7758400-7758563)
chr3 (42-202)||(49216247-49216408)
chr3 (40-202)||(12700173-12700335)
chr3 (40-202)||(7267642-7267804)
chr3 (31-199)||(29932641-29932810)
chr3 (31-199)||(29981795-29981964)
chr3 (38-202)||(29931222-29931388)
chr3 (38-202)||(29980376-29980542)
chr3 (45-179)||(54986970-54987103)
chr3 (41-191)||(55191946-55192096)
chr3 (42-170)||(46719941-46720070)
chr3 (40-171)||(534497-534629)
chr3 (43-202)||(8456479-8456639)
chr3 (59-202)||(6171183-6171324)
chr3 (39-202)||(7268767-7268930)
chr3 (42-202)||(47614185-47614347)
chr3 (41-202)||(54539754-54539916)
chr3 (69-178)||(31645001-31645110)
chr3 (37-173)||(51469967-51470104)
chr3 (41-172)||(46721190-46721322)
chr3 (36-202)||(47610519-47610687)
chr3 (73-202)||(23770346-23770476)
chr3 (40-170)||(34019117-34019246)
chr3 (36-117)||(12703525-12703606)
chr3 (40-172)||(23769855-23769987)
chr3 (39-202)||(51347265-51347430)
chr3 (66-197)||(6250522-6250652)
chr3 (40-170)||(11671313-11671443)
chr3 (42-172)||(51037536-51037666)
chr3 (41-201)||(52839036-52839197)
chr3 (40-171)||(8875904-8876036)
chr3 (40-172)||(47609695-47609828)
chr3 (40-173)||(51470424-51470557)
chr3 (41-143)||(24516459-24516562)
chr3 (125-202)||(47615516-47615594)
chr3 (36-117)||(51038815-51038897)
chr3 (40-117)||(5029708-5029785)
chr3 (36-117)||(28262187-28262268)
chr3 (45-202)||(49398130-49398287)
chr3 (45-168)||(52104484-52104604)
chr3 (30-116)||(5001188-5001275)
chr3 (40-93)||(47615597-47615651)
chr3 (34-98)||(27852998-27853063)
chr3 (42-114)||(53901416-53901487)
chr3 (103-202)||(4271502-4271601)
chr3 (156-202)||(49220492-49220538)
chr3 (40-117)||(53614817-53614895)
chr3 (69-173)||(6249637-6249740)
chr3 (45-172)||(40426748-40426877)
chr3 (83-192)||(54654256-54654365)
chr3 (42-133)||(535791-535883)
chr3 (49-93)||(22775783-22775827)
[»] chr1 (54 HSPs)
chr1 (41-185)||(45157166-45157310)
chr1 (45-202)||(39153056-39153214)
chr1 (66-202)||(39151956-39152092)
chr1 (42-202)||(45148581-45148741)
chr1 (40-168)||(51685739-51685868)
chr1 (37-202)||(14999280-14999442)
chr1 (66-185)||(45156074-45156193)
chr1 (41-202)||(11436041-11436204)
chr1 (40-202)||(45149910-45150073)
chr1 (42-202)||(39699707-39699867)
chr1 (40-171)||(43059977-43060109)
chr1 (40-201)||(11437139-11437302)
chr1 (41-202)||(44404441-44404603)
chr1 (42-201)||(39222413-39222575)
chr1 (40-171)||(43058784-43058915)
chr1 (42-172)||(51684366-51684497)
chr1 (76-202)||(44411906-44412032)
chr1 (45-196)||(24426020-24426173)
chr1 (40-202)||(24422798-24422962)
chr1 (39-171)||(50680329-50680461)
chr1 (39-171)||(35066973-35067106)
chr1 (37-202)||(36613843-36614010)
chr1 (41-202)||(52274967-52275130)
chr1 (40-202)||(35595131-35595296)
chr1 (41-168)||(36612852-36612979)
chr1 (41-202)||(35594216-35594377)
chr1 (41-117)||(33088642-33088719)
chr1 (40-198)||(52276106-52276266)
chr1 (41-172)||(52827346-52827478)
chr1 (45-171)||(30249461-30249588)
chr1 (42-173)||(41364829-41364960)
chr1 (39-117)||(7674525-7674602)
chr1 (40-117)||(23980491-23980569)
chr1 (97-171)||(30248168-30248241)
chr1 (40-173)||(52828039-52828173)
chr1 (39-172)||(7983047-7983180)
chr1 (38-171)||(25652711-25652844)
chr1 (42-114)||(50681632-50681705)
chr1 (41-196)||(14999901-15000057)
chr1 (69-172)||(40384753-40384856)
chr1 (69-202)||(43378652-43378786)
chr1 (41-191)||(39698562-39698712)
chr1 (29-172)||(46066512-46066653)
chr1 (38-121)||(16290089-16290174)
chr1 (97-171)||(31194109-31194183)
chr1 (39-151)||(7675450-7675562)
chr1 (1-37)||(31610503-31610539)
chr1 (40-134)||(11190383-11190478)
chr1 (41-92)||(21945707-21945758)
chr1 (103-202)||(33088129-33088228)
chr1 (45-171)||(37526849-37526975)
chr1 (42-172)||(2940266-2940396)
chr1 (36-93)||(41366179-41366237)
chr1 (139-171)||(39221412-39221444)
[»] chr5 (43 HSPs)
chr5 (45-202)||(24332916-24333074)
chr5 (41-202)||(19752911-19753073)
chr5 (40-202)||(28538674-28538837)
chr5 (45-172)||(2186774-2186901)
chr5 (45-202)||(28539760-28539917)
chr5 (40-202)||(25523067-25523231)
chr5 (39-202)||(40255612-40255776)
chr5 (41-202)||(36486428-36486590)
chr5 (40-202)||(18486841-18487005)
chr5 (42-202)||(20214196-20214357)
chr5 (42-201)||(22940563-22940723)
chr5 (36-172)||(42196170-42196307)
chr5 (99-202)||(16650050-16650154)
chr5 (39-202)||(33160227-33160390)
chr5 (40-170)||(16650827-16650958)
chr5 (41-163)||(21835040-21835162)
chr5 (37-202)||(25055407-25055574)
chr5 (45-172)||(42195137-42195263)
chr5 (40-202)||(5778775-5778939)
chr5 (36-202)||(1015478-1015645)
chr5 (39-171)||(19754101-19754235)
chr5 (44-198)||(36485302-36485457)
chr5 (42-118)||(21834943-21835019)
chr5 (42-202)||(25056319-25056482)
chr5 (41-202)||(1797237-1797398)
chr5 (82-171)||(25524069-25524158)
chr5 (41-131)||(33158097-33158188)
chr5 (36-117)||(18485132-18485214)
chr5 (40-117)||(20216788-20216866)
chr5 (69-115)||(34893693-34893739)
chr5 (73-202)||(1016804-1016932)
chr5 (39-117)||(25524152-25524232)
chr5 (42-117)||(1796054-1796130)
chr5 (40-116)||(5777899-5777974)
chr5 (70-173)||(5730831-5730934)
chr5 (69-133)||(7311618-7311682)
chr5 (40-116)||(5730439-5730517)
chr5 (111-202)||(5961476-5961567)
chr5 (69-199)||(5962515-5962645)
chr5 (42-110)||(2188962-2189030)
chr5 (40-117)||(2685744-2685820)
chr5 (39-117)||(18154491-18154569)
chr5 (73-201)||(38834119-38834246)
[»] chr2 (39 HSPs)
chr2 (41-202)||(802531-802692)
chr2 (41-202)||(22587894-22588055)
chr2 (30-202)||(38840433-38840606)
chr2 (36-202)||(36449772-36449939)
chr2 (66-202)||(810721-810857)
chr2 (40-171)||(18905959-18906090)
chr2 (69-202)||(22587529-22587661)
chr2 (43-171)||(13030293-13030419)
chr2 (41-198)||(11258754-11258913)
chr2 (40-202)||(41879152-41879315)
chr2 (40-202)||(7899822-7899985)
chr2 (40-199)||(36450864-36451023)
chr2 (42-172)||(18299373-18299504)
chr2 (41-202)||(22848190-22848353)
chr2 (33-202)||(7898682-7898852)
chr2 (73-172)||(11996739-11996838)
chr2 (39-202)||(18797243-18797409)
chr2 (40-202)||(38839240-38839403)
chr2 (36-170)||(18300697-18300829)
chr2 (42-181)||(41878092-41878234)
chr2 (69-172)||(24475252-24475355)
chr2 (40-166)||(23869511-23869637)
chr2 (45-117)||(13567975-13568048)
chr2 (55-171)||(18869133-18869251)
chr2 (40-117)||(18904365-18904443)
chr2 (40-171)||(11938760-11938891)
chr2 (69-117)||(32739651-32739699)
chr2 (82-202)||(32739693-32739812)
chr2 (41-202)||(11257621-11257783)
chr2 (69-172)||(26545491-26545594)
chr2 (40-117)||(18868922-18869000)
chr2 (42-116)||(1034495-1034570)
chr2 (69-171)||(28617950-28618051)
chr2 (99-172)||(26544206-26544279)
chr2 (41-93)||(21837304-21837355)
chr2 (42-122)||(24476864-24476943)
chr2 (42-93)||(21837070-21837120)
chr2 (43-93)||(1033212-1033262)
chr2 (41-114)||(5819741-5819814)
[»] chr4 (50 HSPs)
chr4 (40-202)||(1290137-1290301)
chr4 (42-202)||(31600925-31601086)
chr4 (40-202)||(10448200-10448363)
chr4 (42-202)||(10447006-10447168)
chr4 (45-202)||(12129626-12129785)
chr4 (41-202)||(31599788-31599950)
chr4 (40-133)||(26421631-26421724)
chr4 (44-172)||(19750545-19750673)
chr4 (44-172)||(19789133-19789261)
chr4 (40-172)||(37728535-37728667)
chr4 (40-202)||(5526065-5526228)
chr4 (45-190)||(8758789-8758935)
chr4 (39-117)||(49308052-49308130)
chr4 (42-172)||(1834119-1834251)
chr4 (40-202)||(1835041-1835205)
chr4 (40-202)||(25685761-25685925)
chr4 (42-180)||(50909634-50909774)
chr4 (40-201)||(1289095-1289258)
chr4 (40-190)||(8757673-8757822)
chr4 (40-202)||(21177995-21178157)
chr4 (40-172)||(1963194-1963327)
chr4 (36-117)||(17382987-17383068)
chr4 (38-202)||(17388150-17388315)
chr4 (45-202)||(35934347-35934503)
chr4 (42-172)||(25684934-25685065)
chr4 (40-171)||(49306773-49306903)
chr4 (42-202)||(10471327-10471489)
chr4 (38-202)||(52491549-52491712)
chr4 (41-172)||(10470545-10470677)
chr4 (40-172)||(13509329-13509461)
chr4 (40-202)||(13386012-13386178)
chr4 (45-118)||(55602379-55602452)
chr4 (73-133)||(27257969-27258029)
chr4 (41-172)||(5525359-5525490)
chr4 (45-171)||(8155741-8155867)
chr4 (139-202)||(54107957-54108020)
chr4 (45-201)||(35935474-35935631)
chr4 (40-202)||(46637680-46637844)
chr4 (73-172)||(37727729-37727827)
chr4 (41-171)||(3927665-3927796)
chr4 (41-171)||(3928829-3928960)
chr4 (41-116)||(14868889-14868964)
chr4 (41-116)||(14876970-14877045)
chr4 (39-158)||(50909270-50909388)
chr4 (40-116)||(48780246-48780323)
chr4 (42-117)||(1964466-1964542)
chr4 (73-145)||(21539068-21539140)
chr4 (41-116)||(48781072-48781147)
chr4 (41-116)||(13386558-13386635)
chr4 (40-117)||(55603556-55603633)
[»] chr7 (35 HSPs)
chr7 (40-202)||(7501791-7501955)
chr7 (42-201)||(18371424-18371585)
chr7 (40-202)||(42886226-42886389)
chr7 (39-169)||(21505413-21505542)
chr7 (55-171)||(18372428-18372544)
chr7 (69-202)||(22629514-22629648)
chr7 (47-196)||(14999101-14999249)
chr7 (39-202)||(46482594-46482759)
chr7 (40-171)||(22630423-22630555)
chr7 (41-171)||(7500454-7500584)
chr7 (42-202)||(31659622-31659785)
chr7 (43-173)||(3227109-3227239)
chr7 (40-173)||(31949320-31949454)
chr7 (40-173)||(127335-127467)
chr7 (38-116)||(17782579-17782658)
chr7 (40-173)||(3227563-3227697)
chr7 (36-117)||(11658373-11658455)
chr7 (41-202)||(34352726-34352888)
chr7 (42-202)||(47525306-47525468)
chr7 (125-202)||(14998064-14998140)
chr7 (44-172)||(17781663-17781792)
chr7 (41-113)||(20163585-20163658)
chr7 (69-133)||(34351520-34351584)
chr7 (41-198)||(31660953-31661111)
chr7 (39-173)||(31949771-31949906)
chr7 (40-115)||(34174010-34174085)
chr7 (69-171)||(47369809-47369911)
chr7 (45-117)||(11662576-11662649)
chr7 (42-117)||(48934928-48935004)
chr7 (49-115)||(47524532-47524599)
chr7 (38-133)||(48933664-48933759)
chr7 (40-97)||(21508449-21508505)
chr7 (139-196)||(32253373-32253430)
chr7 (40-123)||(597303-597383)
chr7 (162-202)||(34351609-34351649)
[»] chr8 (46 HSPs)
chr8 (40-191)||(24122881-24123032)
chr8 (51-188)||(18970920-18971057)
chr8 (42-172)||(30336471-30336602)
chr8 (37-171)||(5513977-5514111)
chr8 (42-202)||(10006344-10006506)
chr8 (36-202)||(12353301-12353466)
chr8 (45-202)||(30570196-30570353)
chr8 (40-172)||(8389659-8389792)
chr8 (47-171)||(1824049-1824174)
chr8 (47-171)||(1858494-1858619)
chr8 (40-201)||(30568885-30569046)
chr8 (38-202)||(10007702-10007868)
chr8 (51-201)||(18978029-18978179)
chr8 (42-202)||(22220388-22220550)
chr8 (41-172)||(30335638-30335770)
chr8 (73-196)||(18488208-18488331)
chr8 (40-172)||(2379894-2380023)
chr8 (41-172)||(8388463-8388593)
chr8 (45-202)||(11287779-11287937)
chr8 (43-188)||(18979074-18979220)
chr8 (30-202)||(45114457-45114629)
chr8 (69-181)||(24123859-24123971)
chr8 (41-165)||(32207302-32207425)
chr8 (40-202)||(17844276-17844435)
chr8 (41-171)||(22221335-22221466)
chr8 (41-171)||(22227677-22227808)
chr8 (40-171)||(11282006-11282138)
chr8 (45-172)||(40471117-40471244)
chr8 (41-170)||(1823551-1823682)
chr8 (41-170)||(1857996-1858127)
chr8 (41-172)||(24359808-24359938)
chr8 (41-202)||(12351920-12352082)
chr8 (45-115)||(29968364-29968434)
chr8 (70-179)||(29043427-29043536)
chr8 (84-172)||(24361164-24361251)
chr8 (41-172)||(43661793-43661925)
chr8 (73-202)||(43661297-43661427)
chr8 (40-117)||(5514295-5514372)
chr8 (42-93)||(24483143-24483195)
chr8 (40-122)||(42982677-42982760)
chr8 (42-171)||(32973907-32974037)
chr8 (40-99)||(11456636-11456696)
chr8 (40-171)||(32968454-32968586)
chr8 (42-181)||(36249552-36249692)
chr8 (95-172)||(2378914-2378991)
chr8 (42-107)||(23170034-23170098)
[»] scaffold1303 (1 HSPs)
scaffold1303 (39-172)||(1436-1570)
[»] scaffold0019 (2 HSPs)
scaffold0019 (42-172)||(60090-60221)
scaffold0019 (43-172)||(61429-61559)
[»] chr6 (34 HSPs)
chr6 (45-202)||(1829543-1829701)
chr6 (42-202)||(7314880-7315041)
chr6 (40-199)||(16704440-16704600)
chr6 (45-197)||(26574999-26575150)
chr6 (40-172)||(6842253-6842386)
chr6 (39-202)||(7316233-7316398)
chr6 (41-163)||(3333005-3333128)
chr6 (55-202)||(10785853-10786000)
chr6 (39-172)||(27437825-27437959)
chr6 (40-202)||(8659263-8659427)
chr6 (41-202)||(3721611-3721774)
chr6 (40-159)||(8821871-8821991)
chr6 (40-185)||(26574617-26574762)
chr6 (69-202)||(26949125-26949255)
chr6 (38-171)||(27322039-27322172)
chr6 (40-168)||(6840192-6840319)
chr6 (47-202)||(29473082-29473238)
chr6 (39-202)||(14823515-14823680)
chr6 (40-116)||(3722533-3722610)
chr6 (95-172)||(5658810-5658887)
chr6 (43-202)||(12382650-12382811)
chr6 (41-172)||(8660174-8660305)
chr6 (69-171)||(17496825-17496928)
chr6 (42-116)||(8822819-8822894)
chr6 (111-197)||(26717057-26717144)
chr6 (75-133)||(12350832-12350889)
chr6 (39-116)||(27318312-27318389)
chr6 (40-202)||(14822358-14822521)
chr6 (42-117)||(3333149-3333224)
chr6 (96-171)||(3333496-3333571)
chr6 (39-98)||(4597652-4597712)
chr6 (151-202)||(27443860-27443912)
chr6 (39-94)||(27447961-27448017)
chr6 (38-89)||(34834632-34834684)
[»] scaffold0320 (1 HSPs)
scaffold0320 (40-171)||(19486-19618)
[»] scaffold0003 (3 HSPs)
scaffold0003 (39-172)||(49403-49537)
scaffold0003 (39-94)||(39341-39397)
scaffold0003 (151-202)||(43449-43501)
[»] scaffold0302 (2 HSPs)
scaffold0302 (40-198)||(17468-17627)
scaffold0302 (42-191)||(18727-18877)
[»] scaffold2034 (2 HSPs)
scaffold2034 (42-202)||(233-394)
scaffold2034 (73-202)||(918-1047)
[»] scaffold0294 (2 HSPs)
scaffold0294 (40-172)||(5408-5541)
scaffold0294 (40-172)||(4440-4573)
[»] scaffold0586 (2 HSPs)
scaffold0586 (40-159)||(6341-6461)
scaffold0586 (39-171)||(8998-9129)
[»] scaffold0632 (1 HSPs)
scaffold0632 (40-202)||(3248-3410)
[»] scaffold0369 (1 HSPs)
scaffold0369 (31-155)||(13182-13305)
[»] scaffold0049 (2 HSPs)
scaffold0049 (26-163)||(7394-7532)
scaffold0049 (42-118)||(7538-7614)
[»] scaffold0186 (1 HSPs)
scaffold0186 (42-114)||(23081-23152)
[»] scaffold0059 (2 HSPs)
scaffold0059 (69-202)||(3703-3836)
scaffold0059 (43-202)||(4670-4829)
[»] scaffold0093 (2 HSPs)
scaffold0093 (43-172)||(2435-2564)
scaffold0093 (43-172)||(7058-7187)
[»] scaffold0045 (1 HSPs)
scaffold0045 (71-172)||(48339-48437)


Alignment Details
Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 19984846 - 19985010
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |    
T  19984846 ataggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaaccc 19984945  T
Q  138 ttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
     ||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  19984946 ctttgcatctttggtccttttggtcaattttgaccagtcaatgcctacgtggcatgccacatgtg 19985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 19986175 - 19986010
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccct--ctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||   ||||||| ||||||||||||||| ||||| |||||||||||     
T  19986175 taggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaacc 19986076  T
Q  137 cttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    | ||||||| ||||||| ||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  19986075 cctttgcatctttggtcatttcggtcaattttgaccagtcaatgcctacgtggcatgccacgtgtg 19986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 22776924 - 22776752
Alignment:
Q  31 aatagaatataggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaaga 129  Q
    |||| ||||||||||||||||||||||||| || | || ||||| ||| ||||||||||||||| |||||||||||||||||||||||  |||  |||||    
T  22776924 aataaaatataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaaga 22776825  T
Q  130 tttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
     ||| | | ||||||| |||||||| |||   ||||||||||| |||||||||||| ||||||||||||||||    
T  22776824 attagcccctttgcatatttggtccattttcccaattttgaccggtcaatgcctacgtggcatgccacgtgtg 22776752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 54540892 - 54540730
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||||| |  || ||||||||||||||||||||| |||  || |||||||||||||||||||  |||  ||||||||| | | |    
T  54540892 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccct 54540793  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| ||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  54540792 ttgcaactttgatcctttttgtcaattttgaccggtcaatgcctacgtggcatgccacgtgtg 54540730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 7758400 - 7758563
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||| ||| |  || ||||||||||||||||||||| ||| ||| |||||||||||||||||||  |||  ||||||||||| |     
T  7758400 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccc 7758499  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgt 201  Q
    |||| || ||||||||||||||||||||||||||| ||||| || ||  |||||||||||||||    
T  7758500 tttgtatctttggtccttttggtcaattttgacctagtcaacgcttaagtggcatgccacgtgt 7758563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 49216247 - 49216408
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||| | |  |||||||||||| ||||||||||| ||| ||||||||||||||||||||| |  ||| |||||||||| ||| ||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagctcatt 49216346  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| |||| || |||||| |||||||||||  |||||| |||| ||||||| ||||||||    
T  49216347 tgcatctttgatcattttggccaattttgaccgatcaatgtctacgtggcatgtcacgtgtg 49216408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 12700173 - 12700335
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| |||| | || ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||  || |||||| |        
T  12700173 taggctaaagtgcactttccccc-ctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagccaca 12700271  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||| ||||||||||||||||||||||||| |  |||| |||||| ||||| ||||||||||    
T  12700272 ttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 12700335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 7267642 - 7267804
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||| ||||||||||||||||||   || ||||||||||||||||||||||||| ||| ||||| |||||||||||||  |||  ||||||||| |        
T  7267642 taggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcctca 7267741  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||  ||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  7267742 ttgcaactttaatccttttggtcaattttgaccggtcaatgcatacatggcacgccacgtgtg 7267804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 29932810 - 29932641
Alignment:
Q  31 aatagaatataggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaaga 129  Q
    ||||||||  |||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||    
T  29932810 aatagaattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccc-ctaagtacaaaaactacaattttgaccccttaaga 29932712  T
Q  130 tttaactcttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgt 199  Q
    ||||   | |||||| |  | |||||||||| |||||||||||| ||||| | || | |||||||||||||    
T  29932711 tttagtccctttgcaataatagtccttttggccaattttgacctagtcaacgtcttcctggcatgccacgt 29932641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 199
Target Start/End: Complemental strand, 29981964 - 29981795
Alignment:
Q  31 aatagaatataggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaaga 129  Q
    ||||||||  |||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||    
T  29981964 aatagaattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccc-ctaagtacaaaaactacaattttgaccccttaaga 29981866  T
Q  130 tttaactcttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgt 199  Q
    ||||   | |||||| |  | |||||||||| |||||||||||| ||||| | || | |||||||||||||    
T  29981865 tttagtccctttgcaataatagtccttttggccaattttgacctagtcaacgtcttcctggcatgccacgt 29981795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 202
Target Start/End: Original strand, 29931222 - 29931388
Alignment:
Q  38 tataggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    ||||||||||||||||||||||| || | || |||||||||||||||||||| |||| |||  ||||||||||||||||||  |||  |||||||||||     
T  29931222 tataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacc 29931321  T
Q  137 cttttgcatttttggtccttttggtcaattttgac-ctgtcaatgcctacatggcatgccacgtgtg 202  Q
    | |||||| |  | ||||||||||||||||||||| | ||||| ||||  ||||||| |||||||||    
T  29931322 cctttgcaataatagtccttttggtcaattttgacacagtcaacgcctgtatggcattccacgtgtg 29931388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 202
Target Start/End: Original strand, 29980376 - 29980542
Alignment:
Q  38 tataggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    ||||||||||||||||||||||| || | || |||||||||||||||||||| |||| |||  ||||||||||||||||||  |||  |||||||||||     
T  29980376 tataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacc 29980475  T
Q  137 cttttgcatttttggtccttttggtcaattttgac-ctgtcaatgcctacatggcatgccacgtgtg 202  Q
    | |||||| |  | ||||||||||||||||||||| | ||||| ||||  ||||||| |||||||||    
T  29980476 cctttgcaataatagtccttttggtcaattttgacacagtcaacgcctgtatggcattccacgtgtg 29980542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 54987103 - 54986970
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgca 144  Q
    |||||||||||||||||| | |||||||||||| |||| ||||| | || ||||||| |||||||| |||||| ||||| ||||||||| ||| ||||||    
T  54987103 taaagtgcacttttcccc-ctaagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgca 54987005  T
Q  145 tttttggtccttttggtcaattttgacctgtcaat 179  Q
    | |||| || |||||| ||||||||||| ||||||    
T  54987004 tctttgatcattttggccaattttgaccggtcaat 54986970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 41 - 191
Target Start/End: Complemental strand, 55192096 - 55191946
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||| | ||| ||||   || ||||||||||||||||||||||||||||| |||||||||||||||||||  ||| | |||| ||||| | ||    
T  55192096 aggctaaagtgtattttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctt 55191997  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggca 191  Q
    |||| ||||| || |||| ||||||||||| | || |||| ||||||||||    
T  55191996 tgcaattttgatcatttttgtcaattttgatcggttaatgtctacatggca 55191946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 46719941 - 46720070
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    |||||||||||| |||||||| |  || ||| ||||| |||| |||||||||| ||||||| ||||||||||||||||  ||| ||||||||| | | ||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccatt 46720040  T
Q  141 tgcatttttggtccttttggtcaattttga 170  Q
    ||||| ||||||||||||||||||||||||    
T  46720041 tgcatatttggtccttttggtcaattttga 46720070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 534497 - 534629
Alignment:
Q  40 taggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||| |||||| || | ||||||||||||||||||| ||  |||||||||||||||||||||||  |||  ||||||||| |       
T  534497 taggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagccta 534596  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    ||||||| |||||||| ||||| ||||||||||    
T  534597 tttgcatctttggtccatttggccaattttgac 534629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 202
Target Start/End: Original strand, 8456479 - 8456639
Alignment:
Q  43 gctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttg 142  Q
    |||||||||||||||| ||| | || |||||||||||||||||||||| || |||  ||||||||||||||||||  |||  ||||||||| |    |||    
T  8456479 gctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcctcattg 8456578  T
Q  143 catttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||  |||| ||||||| |||||||||||||| ||||| |||| | ||||||||||||||||    
T  8456579 caaatttgatccttttagtcaattttgacctagtcaacgcctgcgtggcatgccacgtgtg 8456639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 6171324 - 6171183
Alignment:
Q  59 cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtcctttt 158  Q
    |||||| |||||| ||||| |||  |||||||||| |||||||||||||||| |||||| ||||| ||||||||||  | ||||||| ||||||||||||    
T  6171324 cccctctaagttttaaaaaattgtgattttggccc-ctatgtacaaaaactataattttgaccctctaagatttaaa-catttgcatctttggtcctttt 6171227  T
Q  159 ggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    || ||||||||||   ||||||||||| ||||| ||||| ||||    
T  6171226 ggccaattttgactaatcaatgcctacttggcacgccacatgtg 6171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 7268930 - 7268767
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||| |||||||||||||||||| | || ||||||||||||||||||||||||  ||| ||| | |||||||||||||  ||   |||||||||   |     
T  7268930 ataggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtccc 7268831  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
     ||||| ||||  |||||||| |||||||||||| |||||||| ||| ||||| ||||||||||    
T  7268830 attgcaattttaatccttttgatcaattttgaccggtcaatgcttacgtggcacgccacgtgtg 7268767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 47614185 - 47614347
Alignment:
Q  42 ggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||| |||  ||||| ||||||||  |||  ||||||||| |   ||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctctt 47614284  T
Q  141 tgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| |||||| |||||||| ||||||||| |  |||| |||||| ||||| ||||||||||    
T  47614285 tgcatctttggtgcttttggttaattttgacttattcaacgcctacgtggcaggccacgtgtg 47614347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 54539754 - 54539916
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||| | |  || ||||||||||||||||||||  ||| |||  |||||||||||||||||| | ||  ||||||||| ||| |    
T  54539754 aggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcat 54539853  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| ||||||| | ||||||||||  ||||| || ||| ||||||||||||||||    
T  54539854 ttgcaactttgatcctttttgccaattttgactggtcaaagcatacgtggcatgccacgtgtg 54539916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 31645001 - 31645110
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    |||||||||||| |||||||||||| ||| || ||||||||||||||||||||   ||||||||| | | ||||||| |||||||||||||  |||||||    
T  31645001 tttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatctttggtccttttgaccaatttt 31645100  T
Q  169 gacctgtcaa 178  Q
    |||| |||||    
T  31645101 gaccggtcaa 31645110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 51469967 - 51470104
Alignment:
Q  37 atataggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaac 135  Q
    |||| |||||||||||||||||||| | | || ||||||||||||||||||||||||| ||| |||| ||||| ||||||| | |||  ||||||||| |    
T  51469967 atattggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagc 51470066  T
Q  136 tcttttgcatttttggtccttttggtcaattttgacct 173  Q
     |  |||||  ||||||||||||| |||||||||||||    
T  51470067 cccattgcaactttggtccttttgatcaattttgacct 51470104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 46721322 - 46721190
Alignment:
Q  41 aggctaaagtgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||| ||| | || ||| ||||| |||| |||||  ||| ||||||||||||||||||||||||  ||  ||||||||| | | |    
T  46721322 aggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccct 46721223  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||| |||||||||| |||||||||||||||    
T  46721222 ttgcatatttggtccttctggtcaattttgacc 46721190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 47610687 - 47610519
Alignment:
Q  36 aatataggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaa 134  Q
    |||||||| |||||||||||||||||| || || ||||||||||||||||||||||||| ||| |||| ||||| |||||||   |||  |||||||||     
T  47610687 aatataggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttag 47610588  T
Q  135 ctcttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    | |  |||||  |||||||||||||  |||||||||||| ||||| ||  | |||||||||||| ||||    
T  47610587 ccccattgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 47610519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 23770476 - 23770346
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| || ||||||||| ||  ||||||||||||||||||||||| |||  ||||||||||| | ||||||| ||| |||||||||||||| |||||||    
T  23770476 aaaaagttacaattttggtcccttatgtacaaaaactacaattttagccccctaagatttaacccctttgcatctttagtccttttggtcaactttgacc 23770377  T
Q  173 -tgtcaatgcctacatggcatgccacgtgtg 202  Q
      ||||| || ||  ||||||||||||||||    
T  23770376 aagtcaacgcatatgtggcatgccacgtgtg 23770346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 34019246 - 34019117
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||| |||||| || |||||||||  || ||||||||||||||||||||| ||| ||| ||||||| |||||||||||   ||  ||| ||||| ||| |    
T  34019246 tagggtaaagtacatttttcccctt-aactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcat 34019148  T
Q  140 ttgcatttttggtccttttggtcaattttga 170  Q
    |||||| ||||||||||||||||||||||||    
T  34019147 ttgcatctttggtccttttggtcaattttga 34019117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 12703606 - 12703525
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||| |||||||||||||||||| ||||| || ||||||||| ||| ||||||||||| ||| |||||||||||||||||||    
T  12703606 aataaaggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 12703525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 23769855 - 23769987
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||| |||||||||||||| | |  || |||||| || ||||||||||   ||||||||| |||||||||||||||| |||| | |||||||  |||     
T  23769855 taggctgaagtgcacttttccacccttaactttcaacaagttgcaattttaatcctctatgtgcaaaaactacaattttgacccct-aagatttcgctca 23769953  T
Q  139 tttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||||| ||||||||||||||||||||||||||    
T  23769954 tttgcatctttggtccttttggtcaattttgacc 23769987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 51347265 - 51347430
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||| ||||||||||||| ||||||  |||||| ||||| |||||||||||| |||||||| |||||||  |||||||| ||||  ||||||||||| |    
T  51347265 ataggttaaagtgcactttccccctcttaagtttgaaaaagttgcaattttggtcctctatgaacaaaaatgacaattttgaccccctaagatttaaccc 51347364  T
Q  138 ttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
     ||||||  |||| || ||||| ||||| ||||||| ||||| || ||| ||||| || |||||||    
T  51347365 gtttgcaactttgatcattttgatcaatgttgacctagtcaacgcatacgtggcaggctacgtgtg 51347430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 6250652 - 6250522
Alignment:
Q  66 aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 165  Q
    |||||| ||||| |||  ||||||| || |||||||||||| ||| ||||||| |||| ||||||||||| | ||||||| |||| ||||||||  ||||    
T  6250652 aagttttaaaaaattgtgattttggtcccctatgtacaaaacctaaaattttagccctctaagatttaac-catttgcatctttgatccttttgaccaat 6250554  T
Q  166 tttgacctgtcaatgcctacatggcatgccac 197  Q
    ||||||   ||||||||||||||||| |||||    
T  6250553 tttgactaatcaatgcctacatggcacgccac 6250522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 11671443 - 11671313
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||| ||  | || |||||||||||||||||||| |||| |||  || ||||||||||  ||| ||||  || |||||||| | |    
T  11671443 taggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaacccct 11671344  T
Q  140 ttgcatttttggtccttttggtcaattttga 170  Q
    || ||| ||||||||||||| ||||||||||    
T  11671343 ttacatctttggtccttttgatcaattttga 11671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 51037536 - 51037666
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||||||||||| ||   || ||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||  ||||| ||| | | |||    
T  51037536 ggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagccccttt 51037635  T
Q  142 gcatttttggtccttttggtcaattttgacc 172  Q
    ||| |  ||||||||||   |||||||||||    
T  51037636 gcagtagtggtcctttttaacaattttgacc 51037666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 201
Target Start/End: Original strand, 52839036 - 52839197
Alignment:
Q  41 aggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||| |||||||| || || || |||||| ||| ||||||| ||||||| |||| ||||| ||||||||| |||| ||| ||||| | |      
T  52839036 aggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagcccca 52839135  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgt 201  Q
    |||||  |||  ||||||||||||||||||||| ||||| |||||  ||| | |||||||||    
T  52839136 ttgcaaatttcatccttttggtcaattttgaccggtcaaagcctatgtggtacgccacgtgt 52839197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 8875904 - 8876036
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||||||| || |  |||||  |||||  ||||||||| ||||  ||||||||||||||||||||||  |||  ||||||||| |       
T  8875904 taggctaaagtgcacttttcaccccttaagttcgaaaaagctgcaattttagccccttatgtacaaaaactacaattttggccccctaagatttagccaa 8876003  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    ||||||| |||||||||||| ||||||||||||    
T  8876004 tttgcatatttggtccttttagtcaattttgac 8876036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 47609695 - 47609828
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||| ||||||||||||| |  || ||||||||||||||||||||| ||| ||| |||| ||||| ||||||| | |||  ||||||||| | |     
T  47609695 taggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccc 47609794  T
Q  139 tttgcatttttggtccttttggtcaattttgacc 172  Q
     |||||  |||||||||||||  |||||||||||    
T  47609795 attgcaactttggtccttttgaccaattttgacc 47609828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 51470557 - 51470424
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||| |||||| | || ||||||||||||||||||| |  || ||| |||| ||||| |||||||    ||  ||||||||| |||      
T  51470557 taggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagctcca 51470458  T
Q  140 ttgcatttttggtccttttggtcaattttgacct 173  Q
    |||||  ||||||||||||| |||||||||||||    
T  51470457 ttgcaactttggtccttttgatcaattttgacct 51470424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 24516459 - 24516562
Alignment:
Q  41 aggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||| ||||||||||||| |||| | || ||| ||||||||||||||||||| | ||| ||| |||||||||||||||  ||| |||||||||| ||| |    
T  24516459 aggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcct 24516558  T
Q  140 ttgc 143  Q
    ||||    
T  24516559 ttgc 24516562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 47615594 - 47615516
Alignment:
Q  125 taagatttaactcttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||||| | | ||||||| ||||||||||||||||||||||||| |  ||||||||||| ||||| ||||||||||    
T  47615594 taagatttagcccctttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtg 47615516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 51038897 - 51038815
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||||||||||||||| | |  || ||| ||||| ||||||||||| ||| ||||| |||||||||||||||||    
T  51038897 aatataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaatttt 51038815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 5029785 - 5029708
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||||||||||||| | |  |||||||| |||||||||||||||  ||| |||| ||||| ||||||||    
T  5029785 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttt 5029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 28262187 - 28262268
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||||||||||||||||| | || ||||||||  |||| |||||||||| | |||||  ||||| ||||||||    
T  28262187 aatataggctaaagtgcacttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 28262268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 49398130 - 49398287
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgca 144  Q
    ||||||||||||||||||   |||||| ||||| ||   |||||||   |||||| ||||||| |||||||||  ||  |||||||||| ||| ||||||    
T  49398130 taaagtgcacttttcccccttaagttttaaaaaattattattttggtgttctatgaacaaaaattacaattttggcctcttaagatttagctcatttgca 49398229  T
Q  145 tttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
      |||| |||||||   |||| |||||| |||||||||||| ||||| |||| |||||    
T  49398230 actttgatcctttttaccaatgttgaccggtcaatgcctacgtggcacgccatgtgtg 49398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 52104484 - 52104604
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgca 144  Q
    |||| ||||||||||||| | || ||||||||| ||| |||||||| |||  |||||||||||||| ||||||  ||   ||||||||||||| ||||||    
T  52104484 taaaatgcacttttcccc-ctaactttcaaaaagttgtaattttggtcct--atgtacaaaaactataattttggccacctaagatttaactcatttgca 52104580  T
Q  145 tttttggtccttttggtcaatttt 168  Q
    | ||||||| |||||  |||||||    
T  52104581 tctttggtcattttgaccaatttt 52104604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 5001188 - 5001275
Alignment:
Q  30 taatagaatataggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    ||||| || |||||||||||||||||||||| || | |  |||||||| |||||||||||||||| ||| |||| ||||| |||||||    
T  5001188 taataaaaaataggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 47615651 - 47615597
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccc 93  Q
    ||||||||||||||||||||||| |  || |||||||||||||||||||||||||    
T  47615651 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccc 47615597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 27853063 - 27852998
Alignment:
Q  34 agaatataggctaaagtgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctat 98  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||  ||||||||||||||| ||||    
T  27853063 agaatataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctat 27852998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 53901487 - 53901416
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaat 114  Q
    ||||||||||||||||||||| | |||||| ||||| ||||||||||| | |  || ||||||||||||||||    
T  53901487 ggctaaagtgcacttttcccc-ctaagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaat 53901416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 4271502 - 4271601
Alignment:
Q  103 aaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||||||||||||| |   |||||||||| | | ||||||  |||| ||||||| ||||||||||||| ||||||| ||| ||| || ||||| ||||    
T  4271502 aaaaactacaattttagcatcttaagatttagcccatttgcaactttgatcctttttgtcaattttgaccggtcaatgtctatatgacacgccacatgtg 4271601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 202
Target Start/End: Complemental strand, 49220538 - 49220492
Alignment:
Q  156 tttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||||||||||||| ||||||| |||| |||| |||||||||||    
T  49220538 tttggtcaattttgaccggtcaatgtctacgtggcttgccacgtgtg 49220492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 53614817 - 53614895
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||||| |||||| | |  || |||||||||||| ||||||| | ||||||| || |||||||||||||||    
T  53614817 taggctaaagtgcatttttcctcccttaactttcaaaaacttacaattttagtcctctatatataaaaactacaatttt 53614895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 6249637 - 6249740
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta-actcttttgcatttttggtccttttggtcaattt 167  Q
    ||||||||||||||||||||   ||  || |||||||||||||||||||| ||| ||||||||||  |||  |||||  |||| |||||||| |||||||    
T  6249637 tttcaaaaacttgcaattttaatcccttaagtacaaaaactacaattttatccc-ttaagatttagtctc-attgcaaatttgatccttttgatcaattt 6249734  T
Q  168 tgacct 173  Q
    ||||||    
T  6249735 tgacct 6249740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 172
Target Start/End: Complemental strand, 40426877 - 40426748
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaatttt-ggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttg 142  Q
    |||||||||||||||||| |  || ||| ||||| |||||| ||| |||||  ||| |||||||| |||||||||  |||  || |||||| ||| ||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagctcctttg 40426778  T
Q  143 catttttggtccttttggtcaattttgacc 172  Q
      | ||||||||||||||| ||||||||||    
T  40426777 tgtctttggtccttttggttaattttgacc 40426748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 192
Target Start/End: Complemental strand, 54654365 - 54654256
Alignment:
Q  83 aattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcc 182  Q
    |||||||| | |||||||||||||| |||||||||| |||| ||  |||||   | ||||||| |||  ||||||| | ||| ||||||| ||||||| |    
T  54654365 aattttggtcttctatgtacaaaaattacaattttagccctctagaatttagaccatttgcatctttaatccttttagccaactttgaccggtcaatgtc 54654266  T
Q  183 tacatggcat 192  Q
    ||| ||||||    
T  54654265 tacgtggcat 54654256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 535883 - 535791
Alignment:
Q  42 ggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta 133  Q
    |||||||||| |||||||| || | || |||||||||||||||||||||| ||  || |||  ||||||| |||||| ||||  |||||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagattta 535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 22775783 - 22775827
Alignment:
Q  49 gtgcacttttcccctcgaagtttcaaaaacttgcaattttggccc 93  Q
    |||||||||||||| | || ||||||||| |||||||||||||||    
T  22775783 gtgcacttttcccccctaactttcaaaaagttgcaattttggccc 22775827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 41 - 185
Target Start/End: Complemental strand, 45157310 - 45157166
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||    
T  45157310 aggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 45157211  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctac 185  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||    
T  45157210 tgcatctttggtccttttggtcaattttgaccagtcaatgcctac 45157166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 45 - 202
Target Start/End: Complemental strand, 39153214 - 39153056
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    |||||||||||||| ||| |  ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| ||||||||||| | |||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 39153115  T
Q  144 atttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    || |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  39153114 atctttggtccttttggtcaattttgaccagtcaatgcctacgtggcatgccacgtgtg 39153056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 39151956 - 39152092
Alignment:
Q  66 aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 165  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||| | ||||||| |||||||||||||||||||    
T  39151956 aagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagatttaacccctttgcatctttggtccttttggtcaat 39152055  T
Q  166 tttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| |||||||||||| ||||||||||| ||||    
T  39152056 tttgaccagtcaatgcctacgtggcatgccacatgtg 39152092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 45148581 - 45148741
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||| ||| |  || ||||||||||||||||||||||||| ||| ||| |||||||||||||||  |||  ||||||||||| | ||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccctt 45148679  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| |||||||||||||| ||||||||||| ||||| |||||| ||||||||||| ||||    
T  45148680 tgcatctttggtccttttggccaattttgaccggtcaaagcctacgtggcatgccacatgtg 45148741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 51685868 - 51685739
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| || || ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||  ||||||||| | |     
T  51685868 taggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccc 51685769  T
Q  139 tttgcatttttggtccttttggtcaatttt 168  Q
    ||||||| |||||||||||||| |||||||    
T  51685768 tttgcatctttggtccttttggccaatttt 51685739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 14999280 - 14999442
Alignment:
Q  37 atataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    ||||||||||||||| |||||||||| | || ||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||| |   ||||| ||    
T  14999280 atataggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctct---atttagct 14999376  T
Q  137 cttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    | | ||||  |||| ||||||| ||||||||||||| |||||||||||| |||||||||| |||||    
T  14999377 catctgcaactttgatcctttttgtcaattttgaccggtcaatgcctacgtggcatgccatgtgtg 14999442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 45156074 - 45156193
Alignment:
Q  66 aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 165  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||| |||||||||||   |||| || ||||||| |||||||||||    
T  45156074 aagtttcaaaaacttacaattttgaccttctatgtacaaaaactacaattttaaccctctaagatttaacctctttgtatctttggtctttttggtcaat 45156173  T
Q  166 tttgacctgtcaatgcctac 185  Q
    ||||||| ||||||| ||||    
T  45156174 tttgaccagtcaatgtctac 45156193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 11436041 - 11436204
Alignment:
Q  41 aggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||||| |  || |||||||||||||||||||||||| | || ||| |||||||||||||||  |||  ||||||||||| | |    
T  11436041 aggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccat 11436140  T
Q  140 ttgcatttttggtccttttggtcaattttgacc-tgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||| |||||| |||||||||||||||||||  ||||| |||||  ||||||||||| ||||    
T  11436141 ttgcatctttggttcttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtg 11436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 45150073 - 45149910
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt-aaccctttaagatttaactct 138  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||||||||  || |||||||||| ||||||||   |||  ||||||||| | |     
T  45150073 taggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccc 45149974  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| |||| ||||||||| ||||||||||| ||||| |||||| ||| ||||||||||||    
T  45149973 tttgcatctttgatccttttggccaattttgaccggtcaaagcctacgtggaatgccacgtgtg 45149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 39699867 - 39699707
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    ||||||||||||||||||||| | || |||||| |||||||||||||| ||| ||| ||||| |||||||||||||  |||  ||||||||| | |  ||    
T  39699867 ggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccccatt 39699768  T
Q  142 gcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||  |||  ||||||||||||||||||||| |||||||||||| ||||| |||| |||||    
T  39699767 gcaactttaatccttttggtcaattttgaccggtcaatgcctacgtggcacgccatgtgtg 39699707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 43060109 - 43059977
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||| ||||| |||| || || ||||||||| ||| ||||||| |||  || ||||||||||||||||||| |||| |||||||||| |||     
T  43060109 taggctaaagtgtactttaccccctctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctca 43060010  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    ||||||| |||||||||||||||||||||||||    
T  43060009 tttgcatctttggtccttttggtcaattttgac 43059977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 201
Target Start/End: Complemental strand, 11437302 - 11437139
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||| ||| |  || |||||||||||||||||||||| ||  || |||||||||||||||||||  |||  ||||||||||| ||    
T  11437302 taggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaaccct 11437203  T
Q  139 tttgcatttttggtccttttggtcaattttgacc-tgtcaatgcctacatggcatgccacgtgt 201  Q
    ||| ||| |||| |||||||||||||||||||||  ||||| || ||  |||||||||||||||    
T  11437202 tttacatctttgatccttttggtcaattttgaccgagtcaacgcttaagtggcatgccacgtgt 11437139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 44404441 - 44404603
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||| ||||||||| |||||  || ||||||||||| |||||||| |||| ||| |||||||||||| ||||||  |||  ||| ||||| |   |    
T  44404441 aggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaat 44404540  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||| ||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  44404541 ttgcatctttggtcattttggtcaattttgaccggtcaatgcctacgtggcacgccacgtgtg 44404603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 201
Target Start/End: Complemental strand, 39222575 - 39222413
Alignment:
Q  42 ggctaaagtgcactttt--cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||  |||||  || ||||||||||||||||||||||||| ||| ||| |||||||||||| ||| |||| ||||||||  | | |    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgcccat 39222476  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgt 201  Q
    |||||| ||||||| |||||| |||||||||| |  |||| |||||| ||||||| |||||||    
T  39222475 ttgcatctttggtctttttgggcaattttgacttattcaacgcctacgtggcatgacacgtgt 39222413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 43058784 - 43058915
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||| |||||| ||||||| ||| | || ||| ||||||||||||||||| ||| ||| |||||||||||||||||||| |||| ||||||||| | | |    
T  43058784 taggttaaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccct 43058883  T
Q  140 ttgcatttttggtccttttggtcaattttgac 171  Q
    || ||| |||| ||||||||||||||||||||    
T  43058884 ttacatctttgatccttttggtcaattttgac 43058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 51684366 - 51684497
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| |  || ||| ||||| ||||||||||||||| ||||||| |||||||||||||||  |||  ||||||||| | | ||    
T  51684366 ggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccctt 51684465  T
Q  141 tgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| |||||||||||||| |||||||||||    
T  51684466 tgcatctttggtccttttggccaattttgacc 51684497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 76 - 202
Target Start/End: Complemental strand, 44412032 - 44411906
Alignment:
Q  76 aacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacctgt 175  Q
    ||||||||||||| | || ||| |||||||||||||||||||| ||||||||||||||   | ||||||  |||| ||||||| | ||||||||||| ||    
T  44412032 aacttgcaattttagtcccctaagtacaaaaactacaattttacccctttaagatttaggccctttgcaactttgatcctttttgccaattttgaccggt 44411933  T
Q  176 caatgcctacatggcatgccacgtgtg 202  Q
    |||||||||| ||||| ||||||||||    
T  44411932 caatgcctacgtggcacgccacgtgtg 44411906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 24426173 - 24426020
Alignment:
Q  45 taaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    ||||||||||||| |||| || || ||||||||||||||||||||||||| ||| ||||||||||||||||||||  ||  ||||||||| | |  ||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgc 24426074  T
Q  144 atttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgcca 196  Q
    |  |||| | |||||||||||||||||||| ||||| || | ||||||||||||    
T  24426073 aaatttgatacttttggtcaattttgacctagtcaacgcttgcatggcatgcca 24426020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 24422798 - 24422962
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||| ||| |  || ||||||||||||||||||||| ||| ||| |||||||||||||||||||  |||  ||||||||| | |     
T  24422798 taggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccc 24422897  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
     |||||  |||| |||||||||||||||||||| | ||||| ||||   ||||||||||||||||    
T  24422898 attgcaaatttgatccttttggtcaattttgacatagtcaacgcctgtgtggcatgccacgtgtg 24422962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 50680329 - 50680461
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||| ||||||||| ||||||||   || || |||||||||||||||||||||| ||| ||| |||||||| |||||||  ||  ||||||||||| |     
T  50680329 ataggttaaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccc 50680428  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    ||||||| |||| ||||||||||||||||||||    
T  50680429 tttgcatctttgatccttttggtcaattttgac 50680461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 35067106 - 35066973
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    |||||||||||||||||||||||| |  |||||||||||| |||| |||||||||| ||||| |||||||||||||||||  |||  ||| ||||| | |    
T  35067106 ataggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagccc 35067007  T
Q  138 ttttgcatttttggtccttttggtcaattttgac 171  Q
     |||||| |  | |||||||||||||||||||||    
T  35067006 ctttgcaataatagtccttttggtcaattttgac 35066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 36614010 - 36613843
Alignment:
Q  37 atataggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaac 135  Q
    |||| |||||||||||| |||||| || | || ||| ||||||||| ||||||||||| ||| ||||||||||||||||||| ||||  ||||||||| |    
T  36614010 atattggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagc 36613911  T
Q  136 tcttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
       ||||||  ||| ||||||||| ||||||||||| |  |||| |||||| ||||| ||||||||||    
T  36613910 ctctttgcaactttagtccttttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtg 36613843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 52274967 - 52275130
Alignment:
Q  41 aggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| |||| | || ||||||||||||||||||||| ||| ||| |||||||||||||||||||   ||  ||||||||| |        
T  52274967 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcctca 52275066  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| |||||||||||||||||||| | ||||| |||| | |||||||||| |||||    
T  52275067 ttgcaaatttgatccttttggtcaattttgacatagtcaacgcctgcgtggcatgccaagtgtg 52275130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 35595296 - 35595131
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaactt-gcaattttggccctctatgtacaaaaacta-caattttaaccctttaagatttaact 136  Q
    |||||||||||| |||||||||| || || ||| |||||||| ||||||||| ||| ||||||| |||||||| |||||||  ||| | |||||||| |     
T  35595296 taggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccct-aagatttagcc 35595198  T
Q  137 cttttgcatttttggtccttttggtcaattttgacc-tgtcaatgcctacatggcatgccacgtgtg 202  Q
    | ||||||| ||||||||||||||||||||||||||  ||||||||  |  ||||||||||||||||    
T  35595197 cctttgcatctttggtccttttggtcaattttgaccaagtcaatgctgatttggcatgccacgtgtg 35595131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 36612852 - 36612979
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||| |||||||| |  || ||||||||| ||||||||||||  || || ||||||||||||||||||||||||  |||||||||   | |    
T  36612852 aggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatct-taagtacaaaaactacaattttaaccccctaagatttagtccct 36612950  T
Q  140 ttgcatttttggtccttttggtcaatttt 168  Q
    |||||| ||||||| ||||||||||||||    
T  36612951 ttgcatctttggtcattttggtcaatttt 36612979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 35594216 - 35594377
Alignment:
Q  41 aggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||| || | || ||||||||||||||||||||| ||| ||| |||  |||||||||||||| ||||  ||| ||||| | | |    
T  35594216 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccc-ctaagtattaaaactacaattttgaccc-ctaaaatttagcccct 35594313  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||| |||||||||||| | |||||||||| | ||||| || ||  ||||||||||||||||    
T  35594314 ttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 35594377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 33088719 - 33088642
Alignment:
Q  41 aggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||||||||||| ||| ||  |||||||||||||||||||| |||| || |||||||||||||||||||    
T  33088719 aggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaatttt 33088642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 198
Target Start/End: Complemental strand, 52276266 - 52276106
Alignment:
Q  40 taggctaaagtgcacttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||| ||||||||||||| ||||| | || ||||||||| ||| ||||||||||| ||| |||||||||||| || ||||  ||  ||||||||| | |     
T  52276266 taggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagcccc 52276167  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacg 198  Q
     |||||  |||| |||||||| ||||||||||||| ||||| || | ||||||||||||||    
T  52276166 attgcaaatttgatccttttgatcaattttgacctagtcaacgcttgcatggcatgccacg 52276106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 52827346 - 52827478
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||||| |  || ||||||||||||||||||||| ||| ||| |||| ||||| ||||||| | |||  ||||||||| | |      
T  52827346 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccca 52827445  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||  |||||||||||||  |||||||||||    
T  52827446 ttgcaactttggtccttttgaccaattttgacc 52827478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 30249588 - 30249461
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    ||||||||||| |||||  || || ||||||||| ||| |||||||  | | |||||||||||||||||||||| |||| |||||||||| ||| ||||     
T  30249588 taaagtgcactcttccctccgtaactttcaaaaagttgtaattttgatcttttatgtacaaaaactacaattttgaccccttaagatttagctcatttgt 30249489  T
Q  144 atttttggtccttttggtcaattttgac 171  Q
    || |||| || ||||| |||||||||||    
T  30249488 atctttgatctttttgatcaattttgac 30249461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 41364829 - 41364960
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||||||||||| || | || ||||||||||||||||||||||||| |||  ||| ||||| |||||||   |||  ||||||||| | |  ||    
T  41364829 ggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagccccatt 41364928  T
Q  142 gcatttttggtccttttggtcaattttgacct 173  Q
    |||  ||||||| ||||| |||||||||||||    
T  41364929 gcaactttggtcattttgatcaattttgacct 41364960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 7674525 - 7674602
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||||| ||||||||| | || ||| |||||||||||||||||| || ||| |||||||||||||||||||    
T  7674525 ataggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgggcc-ctaagtacaaaaactacaatttt 7674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 23980569 - 23980491
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||||||||||||| || || ||| ||||||||||||||||||| | ||| |||||||||||| ||||||    
T  23980569 taggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataatttt 23980491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 30248168 - 30248241
Alignment:
Q  97 atgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgac 171  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||| |||| || |||||| ||||||||||    
T  30248168 atgtacaaaaactacaatttta-ccctctaagatttaactcctttgcatctttgatcattttggccaattttgac 30248241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 52828173 - 52828039
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||| |||||||||||||||||| || || ||||||||||||||||||||||| | ||| |||| ||||| |||||||   |||  ||||||||| | |     
T  52828173 taggttaaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 52828074  T
Q  139 tttgcatttttggtccttttggtcaattttgacct 173  Q
     |||||  |||||||||||||  ||||||||||||    
T  52828073 attgcaactttggtccttttgaccaattttgacct 52828039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 7983047 - 7983180
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||| ||||||||||||||| ||   || |||||| |||||||||||||||||| |||||||  ||||| ||||||||  |||  ||||||||| | |     
T  7983047 ataggttaaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatcccc 7983146  T
Q  139 tttgcatttttggtccttttggtcaattttgacc 172  Q
     |||||  |||  |||||||||||||||||||||    
T  7983147 attgcaaatttcatccttttggtcaattttgacc 7983180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 25652711 - 25652844
Alignment:
Q  38 tataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||||||||||||||| ||| || || || |||||||||||||||||||||  ||  || ||||||||| || || |||  |||  ||||||||| | |    
T  25652711 tataggctaaagtgcaccttttccttctaattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagccc 25652810  T
Q  138 ttttgcatttttggtccttttggtcaattttgac 171  Q
     ||||||| ||||||| |||||| ||||||||||    
T  25652811 atttgcatctttggtcattttggccaattttgac 25652844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 50681705 - 50681632
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaat 114  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| |||||  || ||||||||||||    
T  50681705 ggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaat 50681632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 15000057 - 14999901
Alignment:
Q  41 aggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||| ||||||| || | | || ||| |||||||||||||||||  || ||| |||||||| |||||||  | |||   ||| |||||   | |    
T  15000057 aggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtacaaaatctacaatcatgaccacctaaaatttagtccat 14999958  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgcca 196  Q
    |||||  |||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  14999957 ttgcaactttgatcctttttgtcaattttgacctgtcaatgcctacgtggcatgcca 14999901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 40384753 - 40384856
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||| |||||||||| | |  ||||||||||||||||||||||| | ||  ||| ||||| |   ||||||| |||||||||||||| |||||||    
T  40384753 tttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatcccctaaaatttagcctctttgcatctttggtccttttggccaatttt 40384852  T
Q  169 gacc 172  Q
    ||||    
T  40384853 gacc 40384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 43378786 - 43378652
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    |||||||||||| ||||||||  || ||| ||||||||| ||||||||| |||   ||||||||| | | ||||||| |||  ||||||||||| |||||    
T  43378786 tttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgcatctttaatccttttggtcgatttt 43378687  T
Q  169 gacc-tgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||  ||||| || ||  ||||||||||||||||    
T  43378686 gaccaagtcaacgcatatgtggcatgccacgtgtg 43378652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 191
Target Start/End: Original strand, 39698562 - 39698712
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||| |||| |  || ||| |||||||| |||||||||||| ||| ||||| |||||| ||||||  ||  | |||||||| |        
T  39698562 aggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttggccact-aagatttagcctcg 39698660  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggca 191  Q
    |||||  |||  ||||||||||||||||||||| |||||| |||||||||||    
T  39698661 ttgcaactttaatccttttggtcaattttgaccggtcaatacctacatggca 39698712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 46066512 - 46066653
Alignment:
Q  29 ttaatagaatataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaag 128  Q
    |||||| ||| | |||| |||||||||||||| | | || ||||||||| |||| ||||| ||||  ||||||||||||||||||||||| |||  ||||    
T  46066512 ttaatacaattttggcttaagtgcacttttcctc-ctaactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttagccc-ctaag 46066609  T
Q  129 atttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| |   ||||||| | || || ||||| ||||||||||||    
T  46066610 atttagccaatttgcatctctgatctttttgatcaattttgacc 46066653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 16290089 - 16290174
Alignment:
Q  38 tataggctaaagtgcacttttcccc--tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaacc 121  Q
    |||||||||||||||| |||| |||  || ||  |||||||| |||||||||||| ||  |||||| |||||||||||||||||||    
T  16290089 tataggctaaagtgcattttttccccatctaacgttcaaaaagttgcaattttggtcccttatgtataaaaactacaattttaacc 16290174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 31194109 - 31194183
Alignment:
Q  97 atgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgac 171  Q
    |||||||||||||| ||||||  |||||||||||||| |  |||||||| |||||||||||| | ||||| ||||    
T  31194109 atgtacaaaaactaaaattttggccctttaagatttagcctttttgcatctttggtcctttttgccaattctgac 31194183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 7675562 - 7675450
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||| ||||| | |||  || ||||||||||||||||||||| ||  ||| ||| ||||| || |||||| ||||  ||||||||| | |     
T  7675562 ataggctaaagtgtactttccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccc 7675463  T
Q  139 tttgcatttttgg 151  Q
    ||||||| |||||    
T  7675462 tttgcatctttgg 7675450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31610539 - 31610503
Alignment:
Q  1 gccattattttaattttatttaatttgcttaatagaa 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  31610539 gccattatttaaattttatttaatttgcttaatagaa 31610503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 11190383 - 11190478
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaa 134  Q
    |||||||||||||||||||| || |  || ||| ||||| ||||||||||||  | |||| |||||||||| ||||||| | ||| ||||||||||    
T  11190383 taggctaaagtgcacttttcaccccttaaattttaaaaagttgcaattttggttccctatatacaaaaactgcaattttgatcctctaagatttaa 11190478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 21945707 - 21945758
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggcc 92  Q
    ||||||||||| |||||||||||  |||||| ||||| ||||||||||||||    
T  21945707 aggctaaagtgtacttttcccctttaagttttaaaaagttgcaattttggcc 21945758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 33088129 - 33088228
Alignment:
Q  103 aaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||||||||||||  || |||||||||| | | ||||| | ||| |||||||||| ||||||| ||| ||||| |||||| ||| | ||| ||||||    
T  33088129 aaaaactacaattttattcccttaagatttagcccatttgcttctttagtccttttggccaattttaaccggtcaaagcctacgtggtacgccgcgtgtg 33088228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 37526975 - 37526849
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    ||||||| |||||||||| |  || ||||||||||||||||||||||| | |||  || | |||| ||||||||  ||| | |||||||| | | |||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccct-aagatttagcccctttgc 37526877  T
Q  144 atttttggtccttttggtcaattttgac 171  Q
    || ||||||| ||||| |||||||||||    
T  37526876 atctttggtctttttgatcaattttgac 37526849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 2940266 - 2940396
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||| | ||||||||   |||||| ||||  |||  |||||| ||||||||| |||||||  |||||||| | ||  |||||||||||   |||    
T  2940266 ggctaaagtgtatttttcccccttaagttttaaaatgttgtgattttgaccctctatgaacaaaaataacaattttgatcccctaagatttaacctcttt 2940365  T
Q  142 gcatttttggtccttttggtcaattttgacc 172  Q
    ||| ||||| ||||||| || ||||||||||    
T  2940366 gcaattttgatccttttagttaattttgacc 2940396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 41366237 - 41366179
Alignment:
Q  36 aatataggctaaagtgcacttttcccct-cgaagtttcaaaaacttgcaattttggccc 93  Q
    |||| ||||||||||||||||||||||| | || |||||||||| ||||||||| ||||    
T  41366237 aataaaggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccc 41366179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 39221412 - 39221444
Alignment:
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    ||||||| |||||||||||||||||||||||||    
T  39221412 tttgcatctttggtccttttggtcaattttgac 39221444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 4e-51; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 24332916 - 24333074
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    |||||||||||||| ||| |  ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||| ||||||||||| | |||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 24333015  T
Q  144 atttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    || |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  24333016 atctttggtccttttggtcaattttgaccagtcaatgcctacgtggcatgccacgtgtg 24333074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 19752911 - 19753073
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||||||| ||| |||||||||||||||||||  |||  || |||||| | |  |    
T  19752911 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccat 19753010  T
Q  141 tgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| ||||||||||||||||||||||||| |  |||| |||||| ||||| ||||||||||    
T  19753011 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 19753073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 28538674 - 28538837
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||| | || || ||||||||||||||||||||| |||  || |||||||||||||||||||| |||  ||||||||| | |     
T  28538674 taggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccc 28538773  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||  |||| ||||||| ||||||||||||| ||||||| |||  ||||||||||||||||    
T  28538774 tttgcaactttgatcctttttgtcaattttgaccggtcaatgtctatgtggcatgccacgtgtg 28538837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 2186774 - 2186901
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgca 144  Q
    ||||||||| |||| ||| | |||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||  ||||||||| |  |||| ||    
T  2186774 taaagtgcattttttccccctaagtttcaaaaagttgcaattttggtcttctatgtacaaaaactacaattttaatcccctaagatttagccattttaca 2186873  T
Q  145 tttttggtccttttggtcaattttgacc 172  Q
    | ||||||||||||||||||||||||||    
T  2186874 tctttggtccttttggtcaattttgacc 2186901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 202
Target Start/End: Complemental strand, 28539917 - 28539760
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgca 144  Q
    ||||||||| |||||||| | || ||| ||||||||||||||||| ||||||| |||||||||||||||||||   ||  |||||||||   | ||||||    
T  28539917 taaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgca 28539818  T
Q  145 tttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
      |||| ||||||| | ||||||||||| |||||||||||| ||||||||||||||||    
T  28539817 actttgatcctttttgccaattttgaccggtcaatgcctacgtggcatgccacgtgtg 28539760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 25523067 - 25523231
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| |  || |||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||  ||||||||| | |     
T  25523067 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccc 25523166  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| |||| |||||||| ||||||||||  |  |||| |||||| |||| |||||||||||    
T  25523167 tttgcatctttgatccttttgatcaattttgatttattcaacgcctacgtggcctgccacgtgtg 25523231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 40255776 - 40255612
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||||||||||||||||||||||||  || ||| ||||||||||||||||| ||| |||  |||| |||||||||||||  |||  ||||||||||| |    
T  40255776 ataggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaaccc 40255677  T
Q  138 ttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
      ||||| ||||  || ||||| |||||||||||| |||||||||||| |||| |||||||||||    
T  40255676 cattgcaattttaatctttttgatcaattttgaccggtcaatgcctacgtggcgtgccacgtgtg 40255612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 36486590 - 36486428
Alignment:
Q  41 aggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||| |||||||||||| |||| | || ||| ||||||||||||||||| ||| ||| |||||||||||||||||||   ||  |||||||||   | |    
T  36486590 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccct 36486491  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| ||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  36486490 ttgcaactttgatcctttttgtcaattttgaccggtcaatgcctacgtggcatgccacgtgtg 36486428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 18487005 - 18486841
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||||| |||| |  || ||||||||||||||||||||||||| ||| ||| | |||| ||||||||  |||  ||||||||| | |     
T  18487005 taggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccc 18486906  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| ||||||||||||||||||||||||| |  |||| |||||| ||||| ||||||||||    
T  18486905 tttgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 18486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 20214196 - 20214357
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||||||||||||||   || |||||||||||||||||||| || |||||||||||||||||||||||||  ||| | |||| ||| | | |||    
T  20214196 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccctcaagaattatcccattt 20214295  T
Q  142 gcatttttggtccttttggtcaattttgac-ctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||| |  | |||||||  |||||||||||| | ||||| ||||| |||||| ||||||||||    
T  20214296 gcaatagtagtcctttatgtcaattttgactcggtcaacgcctatatggcaggccacgtgtg 20214357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 201
Target Start/End: Complemental strand, 22940723 - 22940563
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| |  || ||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||  ||| ||||| | | ||    
T  22940723 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgaccc-ctaaaatttagcccctt 22940625  T
Q  141 tgcatttttggtccttttggtcaattttgacc-tgtcaatgcctacatggcatgccacgtgt 201  Q
    | ||| |||  |||||||||||||||||||||  ||||| |||||  |||||||||||||||    
T  22940624 ttcatcttttatccttttggtcaattttgaccaagtcaacgcctaagtggcatgccacgtgt 22940563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 42196307 - 42196170
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaa 134  Q
    |||||||||||||||||||||| |||| |  || ||| ||||| |||  | ||||||||||||||||||||||||||| |||||  ||  |||||||||     
T  42196307 aatataggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttag 42196208  T
Q  135 ctcttttgcatttttggtccttttggtcaattttgacc 172  Q
    | | ||||||| ||||||||||||||||||||||||||    
T  42196207 cccatttgcatctttggtccttttggtcaattttgacc 42196170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 16650050 - 16650154
Alignment:
Q  99 gtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc-tgtcaatgcctacatggcatgccac 197  Q
    ||||||||||||||||||| ||||| ||||||||||| | ||||||| ||||||||||||||||||||||||||  |||||||| |   |||||||||||    
T  16650050 gtacaaaaactacaattttgaccctctaagatttaacccctttgcatctttggtccttttggtcaattttgaccaagtcaatgcatgtgtggcatgccac 16650149  T
Q  198 gtgtg 202  Q
    |||||    
T  16650150 gtgtg 16650154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 33160390 - 33160227
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    |||||||||||||||||||||||| |  || |||||||||||||||||||| |||| ||| ||| | ||||||||||||| |||| |||||||||| | |    
T  33160390 ataggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagc-c 33160292  T
Q  138 ttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
      |||||  |||  ||||||| | ||||||||||| |||||||||||| ||||| ||||| ||||    
T  33160291 cattgcaactttaatccttttagccaattttgaccggtcaatgcctacgtggcacgccacatgtg 33160227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 16650958 - 16650827
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||| | |  || ||| ||||||||||||||||| ||| ||| ||| |||||||||||||||| |||  |||| |||| | |     
T  16650958 taggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagccca 16650859  T
Q  139 tttgcatttttggtccttttggtcaattttga 170  Q
    ||||||| ||||||||||||||||||||||||    
T  16650858 tttgcatctttggtccttttggtcaattttga 16650827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 21835040 - 21835162
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||| |||||| |||||| ||||| |||  |||||| ||| ||||||||||||||||||||||| ||||  ||||||||||| | ||    
T  21835040 aggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagatttaacccctt 21835139  T
Q  141 tgcatttttggtccttttggtca 163  Q
    ||||  |||| ||||||| ||||    
T  21835140 tgcaactttgatccttttagtca 21835162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 25055407 - 25055574
Alignment:
Q  37 atataggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaac 135  Q
    |||||||||||||||||||||||||| || || ||| ||   ||||||||||||  || ||||||| |||||||||||||||  |||  ||||||||| |    
T  25055407 atataggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagc 25055506  T
Q  136 tcttttgcatttttggtccttttggtcaattttga-cctgtcaatgcctacatggcatgccacgtgtg 202  Q
     | ||||||| ||||||||||||| |||||||||| |  ||||||||  |  ||||||||||||||||    
T  25055507 ccatttgcatctttggtccttttgatcaattttgagcaagtcaatgctgatttggcatgccacgtgtg 25055574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 42195137 - 42195263
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgca 144  Q
    ||||||||||||||||||   || ||| ||||| |||| |||||||||| |||||||||||| ||||||||||   ||  ||||||||| | | ||||||    
T  42195137 taaagtgcacttttcccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgca 42195235  T
Q  145 tttttggtccttttggtcaattttgacc 172  Q
    | ||||||||||||||||||||||||||    
T  42195236 tctttggtccttttggtcaattttgacc 42195263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 5778939 - 5778775
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| || || |||||||||||||||||||| |||| ||| |||| ||||| |||||||   |||  ||||||||| | |     
T  5778939 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 5778840  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
     |||||  |||||||||||||  |||||||||||| ||||| ||  | |||||||||||| ||||    
T  5778839 attgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 5778775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 1015478 - 1015645
Alignment:
Q  36 aatataggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaa 134  Q
    |||| |||| ||| ||||||||||| || | || ||| ||||| || |||||||||||| || ||||||||| |||||||||||||||  ||||| |||     
T  1015478 aataaaggcaaaaatgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaattag 1015577  T
Q  135 ctcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
      | ||||||| ||||||||||||   |||||||||||  ||||||||||| || |||||||| ||||    
T  1015578 tccctttgcatatttggtccttttccccaattttgaccaatcaatgcctacgtgacatgccacatgtg 1015645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 19754235 - 19754101
Alignment:
Q  39 ataggctaaagtgcactttt--cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    ||||||||||||||| ||||  |||| | || ||||||||||||||||||||||||| |||  ||||||||||||||||||  |||  || |||||| |     
T  19754235 ataggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcc 19754136  T
Q  137 cttttgcatttttggtccttttggtcaattttgac 171  Q
    |  |||||| |||||||||||||  ||||||||||    
T  19754135 ccattgcatctttggtccttttgaacaattttgac 19754101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 36485302 - 36485457
Alignment:
Q  44 ctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttg 142  Q
    |||||||||| |||||| || | || ||| |||||||| |||||||| ||   || |||||||||||| ||||||  |||  ||||||||||| | ||||    
T  36485302 ctaaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttg 36485401  T
Q  143 catttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacg 198  Q
    ||  |||| || |||| ||||||||||||| ||||||||||| |||||||||||||    
T  36485402 caactttgatcatttttgtcaattttgaccggtcaatgcctatatggcatgccacg 36485457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 21835019 - 21834943
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttta 118  Q
    ||||||||||||||||||||||  |||||| ||||| |||||| |||| || |||||| ||||||||||||||||||    
T  21835019 ggctaaagtgcacttttcccctataagtttgaaaaagttgcaaatttgaccttctatgaacaaaaactacaatttta 21834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 25056482 - 25056319
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta-actctt 139  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||||| ||| ||| |||  |||||||||||||| ||||  |||||||||  ||| |    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcctcat 25056383  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    || ||| ||||||  |||| | |||||||||| | ||||| || ||  ||||||||||||||||    
T  25056382 ttacatctttggttgttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 25056319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 1797398 - 1797237
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||| | |||| ||||  |||||| ||||||||||||||||||| |  |||  |||||||||||||||||   || |||||||||| | | ||    
T  1797398 aggctaaagtggattttttccctttaagttttaaaaacttgcaattttggctccttataaacaaaaactacaattttggtcccttaagatttagcccctt 1797299  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||  |||| | | |||  |||||||||||| |||||||||||  ||||| ||||| ||||    
T  1797298 tgcaactttgattccttttttcaattttgaccggtcaatgcctatgtggcacgccacatgtg 1797237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 25524158 - 25524069
Alignment:
Q  82 caattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgac 171  Q
    |||||||||||  ||| |||||||||||| |||||| ||||  ||||||||| | | ||||||| ||| |||||||||||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatctttagtccttttggtcaattttgac 25524069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 33158097 - 33158188
Alignment:
Q  41 aggctaaagtgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatt 131  Q
    ||||||||||||| ||||  ||| | || ||||||||||||||||||||| | | ||| ||||||||||||||||||| |||| ||||||||    
T  33158097 aggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgaccccttaagatt 33158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 18485132 - 18485214
Alignment:
Q  36 aatataggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||| |||||||||||||||||| |||||| || ||| ||||||||||||||||||||| ||| |||  ||||| ||||||||    
T  18485132 aataaaggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt 18485214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 20216866 - 20216788
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||| |||||||||||||||||| |  || |||||||||||||||||||| || | |||| ||||||||||||||||||    
T  20216866 taggttaaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaatttt 20216788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 34893693 - 34893739
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaatt 115  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||    
T  34893693 tttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 1016932 - 1016804
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| ||| |||||||| | |||||||||||||||||||||||| || |  ||||| ||| ||| |||||||  |||||| ||||   ||||||||| |    
T  1016932 aaaaaattgtaattttggtcttctatgtacaaaaactacaattttgactc-ctaagaattagctcctttgcatagttggtcattttccccaattttgatc 1016834  T
Q  173 tgtcaatgcctacatggcatgccacgtgtg 202  Q
     |||||||||||| | ||||| ||||||||    
T  1016833 ggtcaatgcctacgtagcatgtcacgtgtg 1016804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 25524232 - 25524152
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg--aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||||||||||||||| |   || ||| ||||| ||| ||||||||||| ||| |||||||||||||||||||    
T  25524232 ataggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 25524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 1796054 - 1796130
Alignment:
Q  42 ggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||| |||||| || | || |||||||||||||||| |||||||  ||| |||||||||||||||||||    
T  1796054 ggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaatttt 1796130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 5777899 - 5777974
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    |||||||||||||||||| |||| | || ||||||||||||||||||||| ||| ||| |||| ||||| |||||||    
T  5777899 taggctaaagtgcactttccccc-ctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 5777974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 173
Target Start/End: Complemental strand, 5730934 - 5730831
Alignment:
Q  70 ttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttg 169  Q
    ||||||||||| |||||||||||| ||| |||| ||||| |||||||   |||  ||||||||||| |  |||||  |||||| |||||| |||||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaatttagtccccctaagatttaaccccattgcaactttggttcttttgatcaattttg 5730835  T
Q  170 acct 173  Q
    ||||    
T  5730834 acct 5730831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 7311618 - 7311682
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta 133  Q
    ||||||||||||||||| ||||||  | | |||||||||||||||||||| |||  |||||||||    
T  7311618 tttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagattta 7311682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 5730439 - 5730517
Alignment:
Q  40 taggctaaagtgcacttttcccctcg--aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    ||||||||||||||||||||||| |   || |||||||||||||||||||||||   ||| |||| ||||| |||||||    
T  5730439 taggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 5961476 - 5961567
Alignment:
Q  111 caattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||||| |||  ||| ||||||| | ||||||| |||| ||||||||  || |||| ||| ||||||| ||||||| |||||||||||||    
T  5961476 caattttagccccctaaaatttaacccctttgcatctttgatccttttgaccatttttaaccggtcaatgtctacatgacatgccacgtgtg 5961567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 5962645 - 5962515
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||| ||| |||||||| || ||| |||||||||||| ||||||| ||   ||| ||||| ||  ||| ||| |||||||||||||  |||||||    
T  5962645 tttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccacctaatatttagctaatttacatctttggtccttttgaccaatttt 5962546  T
Q  169 gacctgtcaatgcctacatggcatgccacgt 199  Q
     ||| ||||| | |||  || ||||||||||    
T  5962545 aacccgtcaacgtctatgtgacatgccacgt 5962515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 2189030 - 2188962
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaacta 110  Q
    |||||||| |||||||||| |||  |||||||||||| |||| ||||| |||| ||||||||||||||||    
T  2189030 ggctaaagcgcacttttcctctcttaagtttcaaaaagttgcgattttagccc-ctatgtacaaaaacta 2188962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 2685744 - 2685820
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||| |||| |||||| |||||| | || ||||||||||||  |||||||| || ||| |||||||||||||||||||    
T  2685744 taggataaaatgcactattcccc-ctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 18154491 - 18154569
Alignment:
Q  39 ataggctaaagtgcactttt--cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||| ||||||  |||||  || |||||||||||| |||||||| ||| ||| |||||||||||||||||||    
T  18154491 ataggctaaagtgaacttttttcccctt-aactttcaaaaacttacaattttgaccc-ctaagtacaaaaactacaatttt 18154569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 201
Target Start/End: Original strand, 38834119 - 38834246
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||| | |  |||||||||  || |||||| |  | ||| ||||| ||||||||||      
T  38834119 aaaaagttgcgattttgaccct-tatgtacaaaaactacaattttagctccctaagatttagttcctttgcaataatagtctttttgttcaattttgata 38834217  T
Q  173 tgtcaatgcctacatggcatgccacgtgt 201  Q
    |||||| |||| ||||  |||||| ||||    
T  38834218 tgtcaacgcctgcatgatatgccatgtgt 38834246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 802692 - 802531
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||| || | ||    
T  802692 aggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctt 802593  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| ||||||||||| |||||||||||| | |||||| ||||  ||||||| || |||||    
T  802592 tgcatatttggtcctttaggtcaattttgagcagtcaatacctaggtggcatgtcatgtgtg 802531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 22588055 - 22587894
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||| ||||||||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||| | | |    
T  22588055 aggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggccc-ctatgtacaaaaactacaattttggccccttaagatttagcccct 22587957  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||| |||||||||||||| |||||| |||| ||||| | |||  ||||||||||||||||    
T  22587956 ttgcatctttggtccttttggccaatttcgaccagtcaacgtctatgtggcatgccacgtgtg 22587894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 38840606 - 38840433
Alignment:
Q  30 taatagaatataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaag 128  Q
    ||||| || |||||||||||||||||||||||| |  || |||||||||||||||||||| |||| ||| |||||||||||||||||||| |||  ||||    
T  38840606 taataaaaaataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaag 38840507  T
Q  129 atttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| | |  ||||| ||||  |||||||| |||||||||||| ||||||||||||  ||| |||||||||||    
T  38840506 atttagccccattgcaattttaatccttttgatcaattttgaccggtcaatgcctacgcggcgtgccacgtgtg 38840433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 36 - 202
Target Start/End: Original strand, 36449772 - 36449939
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaa 134  Q
    ||||||||||||||||||||||||||| |  || ||||||||||||||||||||||||| ||| |||||||||||||||||||  |||   |||| |||     
T  36449772 aatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattag 36449871  T
Q  135 ctcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
      | |||||| ||||| ||||||||  ||||||||||| |||||||||||| |||||||||| |||||    
T  36449872 gccctttgcaattttgatccttttgaccaattttgaccggtcaatgcctacgtggcatgccatgtgtg 36449939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 810857 - 810721
Alignment:
Q  66 aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaat 165  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||| || | ||||||| ||||||||||| | |||||    
T  810857 aagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcatatttggtcctttagatcaat 810758  T
Q  166 tttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| | |||||| ||||  ||||||| || |||||    
T  810757 tttgagcagtcaatacctaggtggcatgtcatgtgtg 810721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 18906090 - 18905959
Alignment:
Q  40 taggctaaagtgcacttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||||||||||| | || |||||||||||||||||||| |||| ||| |||||||||||||||||||| |||  ||||||||| |||     
T  18906090 taggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccc-ctaagatttagctca 18905992  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    ||||||| ||||||| ||||| |||||||||||    
T  18905991 tttgcatctttggtctttttgatcaattttgac 18905959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 22587529 - 22587661
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||| || ||||||||| || |||| ||||||||||||||||||  |||  ||||||||| |   ||||||| |||||||||||||| |||||||    
T  22587529 tttcaaaaagttccaattttggtcccctat-tacaaaaactacaattttggccccctaagatttagcctctttgcatctttggtccttttggccaatttt 22587627  T
Q  169 gacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||| |||||||||||||||||||||||||||||    
T  22587628 gaccagtcaatgcctacatggcatgccacgtgtg 22587661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 13030293 - 13030419
Alignment:
Q  43 gctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttg 142  Q
    |||||||||||||||||||| | || ||||||||||||| ||||||||||| ||| ||||||||| |||||||||  |||  ||||||||| ||||||||    
T  13030293 gctaaagtgcacttttcccc-ctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttttgccccctaagatttagctcttttg 13030390  T
Q  143 catttttggtccttttggtcaattttgac 171  Q
    ||| ||||||| |||||||||||||||||    
T  13030391 catctttggtcattttggtcaattttgac 13030419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 11258913 - 11258754
Alignment:
Q  41 aggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||| ||| ||| ||| || ||||||||||||||||||||||||| ||| ||||||||||||||||||||  ||  ||||||||| | |      
T  11258913 aggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagcccca 11258814  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacg 198  Q
    |||||  |||| |||||||||||||||||||||| ||||| || | ||||||||||||||    
T  11258813 ttgcagatttgatccttttggtcaattttgacctagtcaacgcttgcatggcatgccacg 11258754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 41879315 - 41879152
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||| ||||||| ||| |  || ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||  ||| ||||| | |     
T  41879315 taggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagcacc 41879216  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
     ||||| ||||  || ||||| |||||||||||| |||||||||||| |||| |||||||||||    
T  41879215 attgcaattttaatcattttgatcaattttgaccagtcaatgcctacgtggcgtgccacgtgtg 41879152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 7899985 - 7899822
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| |  || |||||||||||||||||||||| || ||| ||||| |||||||||||||| |||  ||||||||| | |     
T  7899985 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccc 7899886  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
     ||| |  |||  || |||||||||||||||||| |||||||| ||| ||||| ||||||||||    
T  7899885 attgtaactttaatctttttggtcaattttgaccggtcaatgcatacgtggcacgccacgtgtg 7899822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 36451023 - 36450864
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||| ||||||||||||||||||   || |||||||||||||||||||||| || ||| ||||| ||||||||||||   |||   |||| ||| ||| |    
T  36451023 taggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcct 36450924  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgt 199  Q
    ||||| ||||| ||||||||| ||||||||||  |||||||||||| |||||| ||||||    
T  36450923 ttgcaattttgatccttttggccaattttgactggtcaatgcctacgtggcataccacgt 36450864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 18299373 - 18299504
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||| | || || |||||||||||| |||||||||||  ||| ||| |||||||||||||||  |||  || |||||| | ||||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcccttt 18299472  T
Q  141 tgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| |||| |||||||||||||||||||||    
T  18299473 tgcatctttgatccttttggtcaattttgacc 18299504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 22848190 - 22848353
Alignment:
Q  41 aggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| |||| | || |||||||||||||||||||||| || |||  ||||||||||||||||||  | |  ||||||||| | | |    
T  22848190 aggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccct 22848289  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  ||||||||||||| ||||||||||| |  |||| |||||| ||||| ||||||||||    
T  22848290 ttgcagctttggtccttttgatcaattttgacttattcaacgcctacgtggcaagccacgtgtg 22848353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 7898682 - 7898852
Alignment:
Q  33 tagaatataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatt 131  Q
    ||||| ||||| ||||||||||||||| || |  || |||||||||||||||||||| |||  ||| ||| | |||||||||||||  |||  |||||||    
T  7898682 tagaaaataggttaaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatt 7898781  T
Q  132 taactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    || | |  ||||| ||||  |||||||| |||||||||||| |||||||| ||| ||||||||||||||||    
T  7898782 tagccccattgcaattttaatccttttgatcaattttgaccagtcaatgcttacgtggcatgccacgtgtg 7898852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 11996739 - 11996838
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| |||| |||||| ||| ||||||||||||||||||||||||   || ||||||||||| | ||| ||| ||||||||||||||||||||||||||    
T  11996739 aaaaagttgcgattttgaccccctatgtacaaaaactacaattttagttctctaagatttaacccctttacatctttggtccttttggtcaattttgacc 11996838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 18797243 - 18797409
Alignment:
Q  39 ataggctaaagtgcacttttcc--cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    ||||||||||||||||||||||  || | || ||||||||||||||||||||| |||  || |||  |||||||||||||| ||||  ||| ||||| |     
T  18797243 ataggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcc 18797342  T
Q  137 cttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    | ||||||| |||||||||||| | |||||||||| | ||||| || ||  ||||||||||||||||    
T  18797343 cctttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 18797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 38839240 - 38839403
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||| |||| ||| |  || |||||||||||||||||||| |||| |||  ||||||||||||||||||  |||  ||||||||| | |     
T  38839240 taggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagcccc 38839339  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
     ||||| ||||  || |||||||||||||||||| |||||||| ||| |||| |||||| ||||    
T  38839340 attgcaattttaatcattttggtcaattttgacccgtcaatgcttacgtggcgtgccacttgtg 38839403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 18300829 - 18300697
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaac 135  Q
    |||||| |||||| ||||||||||||| | || ||||| ||||||||||||||| ||| ||| ||||||||||||||||||| ||||  ||  ||||| |    
T  18300829 aatataagctaaattgcacttttcccc-ctaactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgaccc-ctataatttagc 18300732  T
Q  136 tcttttgcatttttggtccttttggtcaattttga 170  Q
     | ||||||| |||||||||||||| |||||||||    
T  18300731 ccctttgcatctttggtccttttggacaattttga 18300697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 41878092 - 41878234
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaact---tgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||| ||||   || |||||||||||   |||||||||||||| ||| ||||| |||||||||||||  ||| |||||||||| | |     
T  41878092 ggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcccc 41878191  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgc 181  Q
     ||||| ||||  || |||||||||||||||||| ||||||||    
T  41878192 attgcaattttaatctttttggtcaattttgaccggtcaatgc 41878234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 24475252 - 24475355
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||||||| |||||| |||| ||| ||| |||||||||||||||  |||  ||  ||||| ||| ||||||| ||||||||||||||||||||||    
T  24475252 tttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatttgcatctttggtccttttggtcaatttt 24475351  T
Q  169 gacc 172  Q
    ||||    
T  24475352 gacc 24475355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 23869637 - 23869511
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||||| | |  |  || ||||||||||||||||||||| |||  ||||||||||||||||||| | |  ||||||||| | | |    
T  23869637 taggctaaagtgcacttttccacccttaactttaaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccct 23869538  T
Q  140 ttgcatttttggtccttttggtcaatt 166  Q
    |||||| |||| |||||||| ||||||    
T  23869537 ttgcatctttgatccttttgttcaatt 23869511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 13567975 - 13568048
Alignment:
Q  45 taaagtgcacttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||| ||||||||||| | |||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaatttt 13568048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 18869251 - 18869133
Alignment:
Q  55 ttttcccctcgaagtttcaaaaacttg-caattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc-ttttgcatttttggt 152  Q
    ||||| |||| || ||||||||| ||| ||||||||||| |||| ||||||||||||||||||| | ||  ||||||||| | | |||||||| ||||||    
T  18869251 ttttcacctctaactttcaaaaatttggcaattttggccttctaagtacaaaaactacaatttttatcccctaagatttagcccattttgcatctttggt 18869152  T
Q  153 ccttttggtcaattttgac 171  Q
    | ||||| |||||||||||    
T  18869151 ctttttgatcaattttgac 18869133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 18904365 - 18904443
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||||||||||||| |  || |||||||||| ||||||||||||||  || |||||||||||||||||||    
T  18904365 taggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaatttt 18904443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 11938891 - 11938760
Alignment:
Q  40 taggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||| || | || |||||||||||||||||||||| |  ||| ||||||||| || ||||||  |||  ||||| ||| ||||    
T  11938891 taggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgcccccctaagaattagctct 11938793  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    |||||| ||||| || |||| | ||||||||||    
T  11938792 tttgcaattttgatcatttttgccaattttgac 11938760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 32739651 - 32739699
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  32739651 tttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt 32739699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 32739693 - 32739812
Alignment:
Q  82 caattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgc 181  Q
    |||||||||||| | || ||||||||||||||||||  ||| ||||||||||    |||| ||| |||||||| ||||| ||||||||||| ||||| ||    
T  32739693 caattttggccccc-atatacaaaaactacaattttggccccttaagatttagtcattttccatctttggtccatttggccaattttgaccggtcaacgc 32739791  T
Q  182 ctacatggcatgccacgtgtg 202  Q
    |||||| |||  |||||||||    
T  32739792 ctacatcgcacaccacgtgtg 32739812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 11257621 - 11257783
Alignment:
Q  41 aggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| | |||| || ||||||||||||||||||||   || ||| ||| |||||||||||||||  ||   ||||||||| | |      
T  11257621 aggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaacc-ctaagtataaaaactacaattttggcctcctaagatttagcccca 11257719  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| |||||||| ||||||||||| | ||||| |||| | ||||||||||||||||    
T  11257720 ttgcaaatttgatccttttgatcaattttgacatagtcaacgcctgcgtggcatgccacgtgtg 11257783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 26545594 - 26545491
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||| ||||||||||| |||  ||  |||||||| || |||||| ||||| ||||||||| | | ||||||| ||||||| ||||| ||||||||    
T  26545594 tttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagcccctttgcatctttggtcattttgatcaatttt 26545495  T
Q  169 gacc 172  Q
    ||||    
T  26545494 gacc 26545491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 18868922 - 18869000
Alignment:
Q  40 taggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||| |||||||| || | || ||||||||||||||||||||||||  |||  ||||||||||||||||||    
T  18868922 taggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 1034570 - 1034495
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    ||||||||||||||||||||| |  || |||||||||| |||||||||||||| ||| |||| ||||| |||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaattt 1034495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 28617950 - 28618051
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    |||||||| |||||||||||||||| | | ||||||||||| |||||||  |||  ||||||||| | | ||||||| ||||||  |||||||| |||||    
T  28617950 tttcaaaatcttgcaattttggccccccaagtacaaaaacttcaatttt-gccccctaagatttagcccctttgcatctttggttattttggtctatttt 28618048  T
Q  169 gac 171  Q
    |||    
T  28618049 gac 28618051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 26544206 - 26544279
Alignment:
Q  99 gtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||||||||||| ||||| ||   ||||||||| | | ||||||| ||||||||||||| ||||||||||||    
T  26544206 gtacaaaaactacagttttagcctcctaagatttagcacctttgcatatttggtccttttgatcaattttgacc 26544279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 21837355 - 21837304
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccc 93  Q
    |||||||||||||||||| ||| | || |||||||||||||||||||||||||    
T  21837355 aggctaaagtgcactttttccc-ctaactttcaaaaacttgcaattttggccc 21837304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 24476943 - 24476864
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccc 122  Q
    ||||| ||||||||||| ||| | || ||| ||||||||| |||||||| || ||| ||||||||||||||||||| ||||    
T  24476943 ggctagagtgcactttttccccc-aacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgaccc 24476864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 21837070 - 21837120
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccc 93  Q
    ||||||||||||||||| || || || |||||||||||||||||||||||||    
T  21837070 ggctaaagtgcactttttcc-tctaactttcaaaaacttgcaattttggccc 21837120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 1033212 - 1033262
Alignment:
Q  43 gctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccc 93  Q
    ||||||||| |||||||||| | || ||| |||||||||||||||||||||    
T  1033212 gctaaagtgtacttttcccccctaacttttaaaaacttgcaattttggccc 1033262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 5819814 - 5819741
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaat 114  Q
    ||||||| | ||||||| ||||   |||||||||||| |||| ||||||||||  |||| ||||||||||||||    
T  5819814 aggctaaggcgcactttccccccttaagtttcaaaaagttgcgattttggccccatatgaacaaaaactacaat 5819741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 1290301 - 1290137
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| |  || |||||||| |||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||| |     
T  1290301 taggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccc 1290202  T
Q  139 tttgcatttttggtccttttggtcaattttgacc-tgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| ||||||||||||||||||||||||||  ||||| |||||  ||||||||||| ||||    
T  1290201 tttgcatctttggtccttttggtcaattttgaccgagtcaacgcctaagtggcatgccacatgtg 1290137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 31601086 - 31600925
Alignment:
Q  42 ggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||| |||||| || ||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |||| |||||||||| | | ||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatt 31600987  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||  |||| ||||||| ||||||||||||| |||||||||||  ||||||||||||||||    
T  31600986 tgcaactttgatcctttttgtcaattttgaccggtcaatgcctatgtggcatgccacgtgtg 31600925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 10448363 - 10448200
Alignment:
Q  40 taggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||||  || || | |||||||||||| |||| ||||| |||| |||||||||||||||||||||||  |||| |||||| || | |     
T  10448363 taggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccc 10448264  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  10448263 tttgcatctttggtccttttggccaattttgaccagtcaatgcctacgtggcatgccacgtgtg 10448200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 10447006 - 10447168
Alignment:
Q  42 ggctaaagtgcacttttcccc-tcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||||| ||  |||||||||||| |||||||||| |||| |||||||||||||| ||||||||| |||  ||||||||| | | |    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||| ||||||||||||||  |||||| ||| |||||||||||| ||||| ||||||||||    
T  10447106 ttgcatctttggtccttttggctaattttaaccagtcaatgcctacgtggcacgccacgtgtg 10447168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 12129626 - 12129785
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||||  || ||||||||||||||||||| |||| |||||||||| | | |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T
Q  144 atttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    || ||||||| ||||| ||||||||||| |  |||| |||||| ||||| ||||||||||    
T  12129726 atctttggtcattttgatcaattttgacttattcaacgcctacgtggcaggccacgtgtg 12129785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 31599788 - 31599950
Alignment:
Q  41 aggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||| |||||||||||| |||| | || ||| ||||||||||||||||| ||| ||| |||||||||||||||||||   ||  ||||||||| | | |    
T  31599788 aggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccct 31599887  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| ||||||| | ||||||||||| |||||||||||| ||||||||||||||||    
T  31599888 ttgcaactttgatcctttttgccaattttgaccggtcaatgcctacgtggcatgccacgtgtg 31599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 26421724 - 26421631
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta 133  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| ||  ||| ||||||||||||||||||| |||| ||||||||||    
T  26421724 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagattta 26421631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 19750673 - 19750545
Alignment:
Q  44 ctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    ||||||||||||||||||| | || ||| ||||||||||||||||||||| ||| |||||||||||||||||||| |||  ||||||||| | |  ||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19750574  T
Q  144 atttttggtccttttggtcaattttgacc 172  Q
    |  |||| |||||||||||| ||||||||    
T  19750573 aaatttgatccttttggtcacttttgacc 19750545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 19789133 - 19789261
Alignment:
Q  44 ctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    ||||||||||||||||||| | || ||| ||||||||||||||||||||| ||| |||||||||||||||||||| |||  ||||||||| | |  ||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19789232  T
Q  144 atttttggtccttttggtcaattttgacc 172  Q
    |  |||| |||||||||||| ||||||||    
T  19789233 aaatttgatccttttggtcacttttgacc 19789261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 37728667 - 37728535
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||| ||||||||| |||| ||  | || ||| ||||| ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||  |    
T  37728667 taggttaaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttgaccctttaagatttagcttct 37728568  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||| |||| ||||||| |||||||||||||    
T  37728567 ttgcatctttgatccttttagtcaattttgacc 37728535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 5526228 - 5526065
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| |||  ||||| |||||||   |||  ||||||||| | |      
T  5526228 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagcccca 5526129  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| ||||||||||||||  |||||||||||| ||||| ||  | |||||||||||| ||||    
T  5526128 ttgcaattttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 5526065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 8758935 - 8758789
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    |||| ||||||||||||| |  || ||||||||||||||||||||||||| ||| ||||| |||||||||||||  ||| |||||||||| |||  ||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagctccattgc 8758836  T
Q  144 atttttggtccttttggtcaattttgacctgtcaatgcctacatggc 190  Q
    | ||||  ||||||||||||||||||| |  ||||||||||| ||||    
T  8758835 aattttaatccttttggtcaattttgatcgatcaatgcctacgtggc 8758789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 49308130 - 49308052
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||||||||||||||| | || ||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  49308130 ataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 49308052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 1834119 - 1834251
Alignment:
Q  42 ggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt-aaccctttaagatttaactctt 139  Q
    ||||||||||||||||||||| || || ||| |||||||| |||||||| ||| ||||||| |||||||||||||||   |||  ||||||||| | | |    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccat 1834218  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||| ||||||||||||||||||||||||||    
T  1834219 ttgcatctttggtccttttggtcaattttgacc 1834251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 1835205 - 1835041
Alignment:
Q  40 taggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||||||||  | | || ||||||||||||||||||||| ||| ||| |||  |||||||||||||| ||||  ||||||||| | |     
T  1835205 taggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccc 1835106  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| |||||||||||| | |||||||||| | ||||| || ||  ||||||||||||||||    
T  1835105 tttgcatctttggtccttttagccaattttgacttggtcaacgcttatttggcatgccacgtgtg 1835041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 25685925 - 25685761
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| |||| ||||| |||||||  ||||  ||||||||| | |     
T  25685925 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagcccc 25685826  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
     |||||  |||||||||||||  |||||||||||| ||||| ||  | |||||||||||| ||||    
T  25685825 attgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 25685761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 50909774 - 50909634
Alignment:
Q  42 ggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccct-ttaagatttaactctt 139  Q
    ||||||||||||||||| || | | |||||| ||||| |||| |||||| | | ||||||| ||||||||||||||| ||||  |||||||||| | | |    
T  50909774 ggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagcccct 50909675  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatg 180  Q
    |||||| ||||||||||||| |||||||||||| |||||||    
T  50909674 ttgcatctttggtccttttgatcaattttgaccggtcaatg 50909634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 1289095 - 1289258
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||| ||||||| |||||||||| |  || ||||||| | ||| |||||||  |||||| ||| |||||||||||||||| ||  |||||||||||| |     
T  1289095 taggttaaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccc 1289194  T
Q  139 tttgcatttttggtccttttggtcaattttgacc-tgtcaatgcctacatggcatgccacgtgt 201  Q
     |||||| ||||||||||||||||||||||||||  ||||| || ||  |||||||||||||||    
T  1289195 cttgcatctttggtccttttggtcaattttgaccgagtcaacgcttaagtggcatgccacgtgt 1289258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 190
Target Start/End: Original strand, 8757673 - 8757822
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||| |||   || |||||||||||| ||||||| |||| ||| ||||| |||||||||||||   || |||||||||| | |      
T  8757673 taggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagcccca 8757772  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggc 190  Q
    ||||| ||||  ||||||||||||||||||| | |||||||||||| ||||    
T  8757773 ttgcaattttaatccttttggtcaattttga-cggtcaatgcctacgtggc 8757822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 21177995 - 21178157
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||| ||||| |||| | || ||||| ||| |||||||||||  || ||||| ||||||||||||||||| ||||  ||| ||||| | |||    
T  21177995 taggctaaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagccctt 21178094  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| || |||| | ||||||||||  |||||||||||  ||||| ||||||||||    
T  21178095 ttgcaactttgatcatttttgccaattttgactggtcaatgcctatgtggcacgccacgtgtg 21178157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 1963194 - 1963327
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| |  || ||||||||| ||||||||||||||  |||||||||||||||||||||||| |||  ||||| ||| | |     
T  1963194 taggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccc 1963293  T
Q  139 tttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||| |  ||||||||||   |||||||||||    
T  1963294 tttgcaatagtggtcctttttagcaattttgacc 1963327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 17382987 - 17383068
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||||||||||||||| || | || |||||||||||||||||||||| ||  || |||||||||||||||||||    
T  17382987 aatataggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaatttt 17383068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 17388315 - 17388150
Alignment:
Q  38 tataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||||||| ||  || ||||| |||||||||||||  |||   |||| ||| | |    
T  17388315 tataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagccc 17388216  T
Q  138 ttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
     ||| || |  | ||||||| ||||||||||||| | ||||| ||||| |||||| ||||||||||    
T  17388215 ctttacaatagtagtcctttaggtcaattttgacttggtcaacgcctatatggcaggccacgtgtg 17388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 35934347 - 35934503
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgca 144  Q
    |||||||||||||||||| | || ||||||||||||| |||||||| || ||| ||| | ||| || ||||||  ||| |||||||||| | |  |||||    
T  35934347 taaagtgcacttttcccc-ctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgca 35934445  T
Q  145 tttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
      |||  | ||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  35934446 actttaattcttttggtcaattttgaccagtcaatgcctacgtggcatgtcacgtgtg 35934503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 25684934 - 25685065
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| |  || ||||||||||||||||||||| ||||||| |||| ||||| |||||||   |||  ||||||||| | |  |    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccccat 25685033  T
Q  141 tgcatttttggtccttttggtcaattttgacc 172  Q
    ||||  ||||||||||||| ||||||||||||    
T  25685034 tgcaactttggtccttttgatcaattttgacc 25685065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 49306773 - 49306903
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||  || | || |||||||||||||||||||||||| | || |||||||||||||||||||  |||  || ||||||    ||    
T  49306773 taggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaatttt-gcccaatatgatttagtcatt 49306871  T
Q  140 ttgcatttttggtccttttggtcaattttgac 171  Q
    |||||| ||||||||||||  |||||||||||    
T  49306872 ttgcatctttggtcctttttatcaattttgac 49306903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 10471489 - 10471327
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| |  || ||||||||||||||||||||||||| ||| |||| ||||| |||||||   |||  ||||||||| | |  |    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 10471390  T
Q  141 tgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||  |||||||||||||  |||||||||||| ||||| ||  | |||||||||||| ||||    
T  10471389 tgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 10471327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 52491712 - 52491549
Alignment:
Q  38 tataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    |||||||||||||| |||||||| | |  || |||||||||||||||||||||| ||||||  |||| |||||||||||||  |||  ||| ||||| |     
T  52491712 tataggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagcc 52491613  T
Q  137 cttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |  |||||  |||  ||||||||||||||||||||  |||||||||||| ||||  ||||||||||    
T  52491612 ccattgcaactttaatccttttggtcaattttgacaggtcaatgcctacgtggc--gccacgtgtg 52491549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 10470545 - 10470677
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||||| |  || ||||||||||||||||||||| ||||||| |||| ||||  |||||||   |||  ||||||||| | |      
T  10470545 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagcccca 10470644  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||  ||||||||||||| ||||||||||||    
T  10470645 ttgcaactttggtccttttgatcaattttgacc 10470677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 13509461 - 13509329
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||| |||||||||| | || ||| ||||| ||||||||||||||| | | |||  |||||||||||||| | ||  ||||||||| | | |    
T  13509461 taggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccct 13509362  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||  |||| ||||||||| |||||||||||    
T  13509361 ttgcacctttgctccttttggccaattttgacc 13509329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 13386012 - 13386178
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaa-acttgcaattttggccctctatgtacaaaaactacaattt-taaccctttaagatttaact 136  Q
    ||||||||||||||||||||||| || || |||||||| ||||||||||||||||| ||| |||| ||||| ||||||| |  |||  ||||||||| |     
T  13386012 taggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcc 13386111  T
Q  137 cttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
       |||||  ||||||||||||| ||||||||||||| ||||| ||  | |||||||||||| ||||    
T  13386112 tcattgcaactttggtccttttgatcaattttgacctagtcaacgctgatatggcatgccacatgtg 13386178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 55602379 - 55602452
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttta 118  Q
    ||||||||| |||||||||  || |||||||||||||||||||| | ||||||| || ||||||||||||||||    
T  55602379 taaagtgcatttttcccctttaactttcaaaaacttgcaattttagtcctctatatataaaaactacaatttta 55602452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 27258029 - 27257969
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta 133  Q
    ||||| ||||||||||| |||||||| |||||||||| |||||||||||| ||||||||||    
T  27258029 aaaaagttgcaattttgaccctctatatacaaaaactccaattttaaccccttaagattta 27257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 5525359 - 5525490
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    |||||||||| || |||||||| | || ||||||||||||||||||||| ||| ||| |||| ||||| |||||||   |||  ||||||||| | |  |    
T  5525359 aggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5525458  T
Q  141 tgcatttttggtccttttggtcaattttgacc 172  Q
    ||||  |||||||||||||  |||||||||||    
T  5525459 tgcaactttggtccttttgaccaattttgacc 5525490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 8155741 - 8155867
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggc-cctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    |||||||||||||||||| | || |||||||||||||||||||| || || ||| || ||||||||||||||||  |||  ||||||||| |   |||||    
T  8155741 taaagtgcacttttcccc-ctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgc 8155839  T
Q  144 atttttggtccttttggtcaattttgac 171  Q
    || ||| ||| |||||||||| ||||||    
T  8155840 atctttagtcattttggtcaactttgac 8155867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 54107957 - 54108020
Alignment:
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| ||||||| |||||| ||||||| ||| |||||||||||||||||| ||||||||||    
T  54107957 tttgcatctttggtctttttggccaattttaaccagtcaatgcctacatggcacgccacgtgtg 54108020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 201
Target Start/End: Complemental strand, 35935631 - 35935474
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    ||||||||||||| |||| |  || ||| ||||| |||||||||| |||| ||| ||||| |||||||||||||  |||  ||||||||| |    ||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcctcattgc 35935532  T
Q  144 atttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgt 201  Q
    |  |||  ||||||||| ||||||||||| |||||||||||  ||||| |||||||||    
T  35935531 aactttaatccttttggccaattttgaccggtcaatgcctatgtggcacgccacgtgt 35935474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 46637680 - 46637844
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||   |||  |||| ||| |||||||||  ||||| || | |||||||||||||||||||||||   || |||| | ||||    |    
T  46637680 taggctaaagtgcactcccccctccgaacttttaaaaacttgtgattttagctccctatgtacaaaaactacaattttggtcccttaataattaatcaat 46637779  T
Q  140 ttgcatttttggtccttttggt--caattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||| ||||||| ||||  |  ||||||||||| |||||||||||| ||||||||||| ||||    
T  46637780 ttgcatatttggtcattttttttccaattttgaccggtcaatgcctacgtggcatgccacatgtg 46637844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 37727729 - 37727827
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta-actcttttgcatttttggtccttttggtcaattttgac 171  Q
    ||||| ||| ||||||||| || ||| ||||||||||||||||||||||| ||||||||||  ||| |||| || ||||||| |||| ||||||||||||    
T  37727729 aaaaagttgtaattttggctct-tatatacaaaaactacaattttaaccccttaagatttagtctc-tttgtatctttggtcattttagtcaattttgac 37727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 3927665 - 3927796
Alignment:
Q  41 aggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| |||||| || ||| ||||  |||| |||||||||| | |||||  ||||||||||||||   ||| || | |||| | | |    
T  3927665 aggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaattttggtcctctatgttttagcccat 3927764  T
Q  140 ttgcatttttggtccttttggtcaattttgac 171  Q
    |||||||||  |||||||||| ||||||||||    
T  3927765 ttgcattttcagtccttttgggcaattttgac 3927796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 3928960 - 3928829
Alignment:
Q  41 aggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| |||| | || ||||||||  |||| |||||||||| |||||||  ||||| ||||||||  |||| || | |||| | | |    
T  3928960 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaattttggccctctatgttttagcccct 3928861  T
Q  140 ttgcatttttggtccttttggtcaattttgac 171  Q
    |||||||||  |||||||| | ||||||||||    
T  3928860 ttgcattttcagtccttttaggcaattttgac 3928829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 14868889 - 14868964
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    |||||||||||||||||||||| | |  |||||||| |||||||||||||||| ||| |||  ||||| |||||||    
T  14868889 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14868964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 14877045 - 14876970
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    |||||||||||||||||||||| | |  |||||||| |||||||||||||||| ||| |||  ||||| |||||||    
T  14877045 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaattt 14876970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 50909270 - 50909388
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||| | ||||  || | |||||| ||||| ||||||||||| ||  |||| || |||||||||||||||||||   |||||||| | ||     
T  50909270 ataggctaaagtgtatttttttcccctaagttttaaaaagttgcaattttgacctcctatatataaaaactacaattttaacctcctaagattt-agtca 50909368  T
Q  139 tttgcatttttggtcctttt 158  Q
    ||||||| ||||||||||||    
T  50909369 tttgcatctttggtcctttt 50909388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 48780246 - 48780323
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    ||||||||||||||||||||||| |  || ||| ||||||||||||||||| ||| ||| |||| ||||| |||||||    
T  48780246 taggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 48780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 1964542 - 1964466
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||||||||| | |  || ||| ||||| || |||||||||||| ||||| |||||||||||||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaatttt 1964466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 21539140 - 21539068
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcat 145  Q
    ||||||||||||||||||||  ||| ||  ||||||||||||||| ||||  ||||||||| ||| |||||||    
T  21539140 aaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgcat 21539068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 48781147 - 48781072
Alignment:
Q  41 aggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    |||||||||||||||||| |||||| || ||||||||| |||||||||||| || ||| |||| ||||| |||||||    
T  48781147 aggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggtcc-ctaagtactaaaaccacaattt 48781072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 13386635 - 13386558
Alignment:
Q  41 aggctaaagtgcactttt--cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    ||||||||||||||||||  |||| | || ||||||||||||||||||||| |||  || |||| ||||| |||||||    
T  13386635 aggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaattt 13386558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 55603633 - 55603556
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||| |||||||||||||| |||   || ||||||||||||||||||||   || || |||||||||||||| |||||    
T  55603633 taggttaaagtgcactttttccccttaactttcaaaaacttgcaattttaatcccctgtgtacaaaaactactatttt 55603556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 7501955 - 7501791
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| |||  ||||| ||||||||  ||| ||||||| || | |     
T  7501955 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccc 7501856  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| ||||||||||||||||||||||||| |  ||||||||||| ||||| ||||||||||    
T  7501855 tttgcatctttggtccttttggtcaattttgacttattcaatgcctacgtggcaggccacgtgtg 7501791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 201
Target Start/End: Original strand, 18371424 - 18371585
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||  || |||||||||||||||||||  |||  ||||||||| | | ||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcacatt 18371523  T
Q  141 tgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgt 201  Q
    ||||| |||| |||||||||||||||||||| |  |||| |||||| ||||| |||||||||    
T  18371524 tgcatctttgatccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgt 18371585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 42886389 - 42886226
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||| ||||||||||||||| ||||  || ||||||||| ||||||||||| ||| |||  ||||||||||||||||||| |||  ||||||||| | |     
T  42886389 taggttaaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagccca 42886290  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||| |||| || ||||||||||||||||||  |||||| |||  ||||||||||||||||    
T  42886289 tttgcatctttgatcattttggtcaattttgaccgatcaatgtctatgtggcatgccacgtgtg 42886226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 39 - 169
Target Start/End: Original strand, 21505413 - 21505542
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||||||||||| | || ||||||||| |||| |||||||||| | || |||||||||||||||||| ||||  ||||||||| | |     
T  21505413 ataggctaaagtgcacttttcccc-ctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccc 21505511  T
Q  139 tttgcatttttggtccttttggtcaattttg 169  Q
    ||||||| |||||||||||||| ||||||||    
T  21505512 tttgcatctttggtccttttggacaattttg 21505542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 18372544 - 18372428
Alignment:
Q  55 ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtcc 154  Q
    |||||||| | || ||||||||||||||||||||||||| ||| |||||||||||||||||||  |||  ||||||||| | | |||| || ||||||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatctttggtcc 18372445  T
Q  155 ttttggtcaattttgac 171  Q
    |||||||||||||||||    
T  18372444 ttttggtcaattttgac 18372428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 22629514 - 22629648
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||||||| ||||||||||  ||| |||||||||||||||||||  |||  ||||||||| | | ||||||| ||||||||||||||||||||||    
T  22629514 tttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcccctttgcatctttggtccttttggtcaatttt 22629613  T
Q  169 gacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||| |  |||| |||||| |||| |||||||||||    
T  22629614 gacttattcaacgcctacgtggcctgccacgtgtg 22629648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 47 - 196
Target Start/End: Complemental strand, 14999249 - 14999101
Alignment:
Q  47 aagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatt 146  Q
    |||||||||||||||| | || |||||||| |||||||||||| ||| |||  ||||||||||||||||||  | |  ||||||||| | | |||||||     
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcatc 14999151  T
Q  147 tttggtccttttggtcaattttgacctgtcaatgcctacatggcatgcca 196  Q
    |||| |||||| |||||||||||||| |||||||| ||| ||||||||||    
T  14999150 tttgttcctttaggtcaattttgaccggtcaatgcttacgtggcatgcca 14999101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 202
Target Start/End: Original strand, 46482594 - 46482759
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    |||| |||||||||| ||||| ||||  || ||||||||| ||| || |||| ||| |||||||||||||||| |||||||| ||  ||||||||| |||    
T  46482594 atagactaaagtgcatttttctcctcctaattttcaaaaatttgtaaatttgaccccctatgtacaaaaactataattttaatcccctaagatttatctc 46482693  T
Q  138 ttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
     |||||||||||  |||||||||||||||||||| |  ||||||||||| ||||| |||| |||||    
T  46482694 ctttgcattttttatccttttggtcaattttgacttattcaatgcctacgtggcaagccatgtgtg 46482759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 22630555 - 22630423
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||  |  || ||||||||||||||||||||||||| |||  ||||||||||||||||||| |||  ||||||| | |       
T  22630555 taggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctc 22630456  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    |||| || |||||||||||||||||||||||||    
T  22630455 tttgtatctttggtccttttggtcaattttgac 22630423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 7500454 - 7500584
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||||   || |||||||||||||||||||||  |||||| ||| | |||| ||||||||  |||  ||||||||| | | ||    
T  7500454 aggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccctt 7500553  T
Q  141 tgcatttttggtccttttggtcaattttgac 171  Q
    ||||| |||| ||||||||||||||||||||    
T  7500554 tgcatctttgatccttttggtcaattttgac 7500584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 31659622 - 31659785
Alignment:
Q  42 ggctaaagtgcactttt--cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||  |||| | || |||||||||||| |||||||| ||| ||| |||||||||||||||||||  |||  ||||||||| | |      
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccca 31659721  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| |||||||||||||||||||| | ||||| || | | ||||||||||||||||    
T  31659722 ttgcaaatttgatccttttggtcaattttgacatagtcaacgcatgcgtggcatgccacgtgtg 31659785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 3227109 - 3227239
Alignment:
Q  43 gctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttg 142  Q
    ||||||||||||||| |||| | || ||||||||||||||||||||||||| ||| |||| ||||| |||||||   ||| |||||||||| | |  |||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagccccattg 3227208  T
Q  143 catttttggtccttttggtcaattttgacct 173  Q
    ||  |||||||||||||  ||||||||||||    
T  3227209 caactttggtccttttgaacaattttgacct 3227239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 173
Target Start/End: Original strand, 31949320 - 31949454
Alignment:
Q  40 taggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||||||||| | | || ||||||||||||||||||||||||| ||| |||| ||||| |||||||   |||  ||||||||| | |     
T  31949320 taggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 31949419  T
Q  139 tttgcatttttggtccttttggtcaattttgacct 173  Q
     |||||  ||||||||||||| |||||||||||||    
T  31949420 attgcaactttggtccttttgatcaattttgacct 31949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 173
Target Start/End: Original strand, 127335 - 127467
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||| || ||| |||| ||||| |||| |||| |||  ||||||||| | |      
T  127335 taggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaa-tttagccccctaagatttagcccaa 127433  T
Q  140 ttgcatttttggtccttttggtcaattttgacct 173  Q
    |||||  |||||||||||||  ||||||||||||    
T  127434 ttgcaactttggtccttttgaccaattttgacct 127467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 17782658 - 17782579
Alignment:
Q  38 tataggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| |||| ||||| |||||||    
T  17782658 tataggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaattt 17782579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 3227697 - 3227563
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| |  || ||||||||||||||||||||||||| ||| |||| ||||| |||||||    ||  ||||||||| | |     
T  3227697 taggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagcccc 3227598  T
Q  139 tttgcatttttggtccttttggtcaattttgacct 173  Q
     |||||  ||||||||||||| |||||||||||||    
T  3227597 attgcaactttggtccttttgatcaattttgacct 3227563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 11658373 - 11658455
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||||||| ||||||||||||| |  || |||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  11658373 aatataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaatttt 11658455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 34352888 - 34352726
Alignment:
Q  41 aggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| | |||| || |||||||||||| | ||||||| ||  || ||||| |||||| ||||||  |||| |||||||||||  |     
T  34352888 aggctaaagtgcactttttcacctctaattttcaaaaactttctattttggtcccttaagtacataaactataattttggccctctaagatttaacctta 34352789  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||  || |||||| ||||||||||| |||||||||||| || || ||||||||||    
T  34352788 ttgcaactttaatcattttggccaattttgaccggtcaatgcctacgtgacacgccacgtgtg 34352726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 47525468 - 47525306
Alignment:
Q  42 ggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| || || |||||||||||||||||||| |||| ||| |||  ||||| |||||||   |||  ||||||||| | |  |    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccccat 47525369  T
Q  141 tgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||  |||||||||||||  |||||||||||| ||||| ||  | |||||||||||| ||||    
T  47525368 tgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 47525306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 14998064 - 14998140
Alignment:
Q  125 taagatttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||||| | | ||||||| |||||||||||||||||||||| | | |||||||||||||| ||||||||||||||    
T  14998064 taagatttagcccctttgcatctttggtccttttggtcaattttaatcggtcaatgcctacat-gcatgccacgtgtg 14998140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 17781663 - 17781792
Alignment:
Q  44 ctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttg 142  Q
    ||||||||||||||||||| |  || ||||||||||||||||||||| ||| ||| |||| ||||| ||||||| | |||  ||||||||| | |  |||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattg 17781762  T
Q  143 catttttggtccttttggtcaattttgacc 172  Q
    ||  |||||||||||||  |||||||||||    
T  17781763 caactttggtccttttgaccaattttgacc 17781792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 20163658 - 20163585
Alignment:
Q  41 aggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaa 113  Q
    |||||||||||||||| ||| || | || ||||||||||||||||||||||| | |||||||||||||||||||    
T  20163658 aggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 34351520 - 34351584
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta 133  Q
    ||||||||||||||||||||||| ||| | ||| | |||||||||||||||||| ||||||||||    
T  34351520 tttcaaaaacttgcaattttggctctccaagtatagaaactacaattttaaccccttaagattta 34351584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 31661111 - 31660953
Alignment:
Q  41 aggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||| ||| ||| || ||||||||| ||||||||||| |||| || |||||||||||| |||||||  ||  ||| |||||||        
T  31661111 aggctaaagtgcactttcccctctctaactttcaaaaatttgcaattttgaccctttacgtacaaaaactataattttagtcccctaaaatttaacctca 31661012  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacg 198  Q
    |||||  |||| |||||||||  ||||||||||| ||||| || | ||||||||||||||    
T  31661011 ttgcaaatttgatccttttgg-gaattttgacctagtcaacgcttgcatggcatgccacg 31660953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 31949906 - 31949771
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||||||||||||||| |||||| |  || ||||||||||||||||||||||||| |||  ||| ||||| |||||||    ||  ||||||||| | |    
T  31949906 ataggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagccc 31949807  T
Q  138 ttttgcatttttggtccttttggtcaattttgacct 173  Q
      |||||  ||||||||||||| |||||||||||||    
T  31949806 cattgcaactttggtccttttgatcaattttgacct 31949771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 34174085 - 34174010
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatt 115  Q
    ||||||||||||||||||||||| | |  |||||||| |||||||||||||||| ||| |||| ||||| ||||||    
T  34174085 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 47369809 - 47369911
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    |||||||||||||||||||| |||   || |||||||||||| ||||||  ||| |||||||||| | | ||||||| ||| ||  ||||||||||||||    
T  47369809 tttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctttgcatctttagttattttggtcaatttt 47369908  T
Q  169 gac 171  Q
    |||    
T  47369909 gac 47369911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 11662649 - 11662576
Alignment:
Q  45 taaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    ||||||||| |||||||| |  || |||||||||||||||||||| || |||||||||||||||||| ||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataatttt 11662576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 48935004 - 48934928
Alignment:
Q  42 ggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||| |||||| || | || ||||||||||||| ||||||| ||||||| |||||||||||| ||||||    
T  48935004 ggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaatttt 48934928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  49 gtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatt 115  Q
    |||||||||||||| || || ||||||||||||||||||||||||| ||| |||| ||||| ||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 48933664 - 48933759
Alignment:
Q  38 tataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta 133  Q
    ||||||||||| || ||||||||| |  || ||| |||||||||||||||||  ||  |||  ||||||||||||||||| | || ||||||||||    
T  48933664 tataggctaaaatgtacttttcccttttaaattttaaaaacttgcaattttgatcccttataaacaaaaactacaattttgatcccttaagattta 48933759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 21508505 - 21508449
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctcta 97  Q
    |||||||||||||| |||||||||  || ||||||||| || ||||||||||||||||    
T  21508505 taggctaaagtgcatttttcccctt-aactttcaaaaagtttcaattttggccctcta 21508449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 32253430 - 32253373
Alignment:
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgcca 196  Q
    ||||||| ||||||||||||||  |||||||||| ||||||| |||| ||||| ||||    
T  32253430 tttgcatctttggtccttttggcaaattttgaccggtcaatgtctacgtggcacgcca 32253373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 597383 - 597303
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccct 123  Q
    |||||||| ||||| |||||||||  || ||||||||||||| ||||||| | |  || ||||||||||||||||||| |||||    
T  597383 taggctaatgtgcatttttcccct--aactttcaaaaacttgaaattttgacgca-taagtacaaaaactacaattttgaccct 597303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 34351609 - 34351649
Alignment:
Q  162 caattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||||||| |||||||||||| ||||| ||||||||||    
T  34351609 caattttgaccggtcaatgcctacgtggcacgccacgtgtg 34351649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 191
Target Start/End: Original strand, 24122881 - 24123032
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||| |||||||| | || ||| ||||| ||||||||||| ||| ||| |||||||||||| |||||||  ||  ||||||||| ||  |    
T  24122881 taggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagcttct 24122980  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggca 191  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  24122981 ttgcatctttggtccttttggtcaattttgaccggtcaatgcctacgtggca 24123032  T

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Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 18970920 - 18971057
Alignment:
Q  51 gcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttg 150  Q
    |||||||||||| | || |||||||| ||| |||||||||||| ||| ||||||||||||||||||| |||| | |||||||||| | ||||||  ||||    
T  18970920 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgcaactttg 18971019  T
Q  151 gtccttttggtcaattttgacctgtcaatgcctacatg 188  Q
    |||||||| | ||||||||||| |||||||||||||||    
T  18971020 gtcctttttgccaattttgaccggtcaatgcctacatg 18971057  T

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Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 30336602 - 30336471
Alignment:
Q  42 ggctaaagtgcactt-ttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||| |||||| | || ||||||||||||  |||||| |||  ||| ||||||||||||||||||||||||| ||||||||| |  |||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccattt 30336503  T
Q  141 tgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| ||||||||||||||||||||||||||    
T  30336502 tgcatctttggtccttttggtcaattttgacc 30336471  T

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Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 5513977 - 5514111
Alignment:
Q  37 atataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    |||||||||||||||||||||| ||| | || |||||||||||| |||||||||||| ||| |||||||||||||||||||  |||  ||| ||||| |     
T  5513977 atataggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcc 5514076  T
Q  137 cttttgcatttttggtccttttggtcaattttgac 171  Q
    | ||||||| ||||||||||||| |||||||||||    
T  5514077 cctttgcatctttggtccttttgatcaattttgac 5514111  T

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Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 10006344 - 10006506
Alignment:
Q  42 ggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| |||  ||||| ||||||||  |||  ||||||||| | | ||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccctt 10006443  T
Q  141 tgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| ||||||||||||||||||||||||| |  |||| |||||| ||||| ||||||||||    
T  10006444 tgcatctttggtccttttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 10006506  T

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Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 12353466 - 12353301
Alignment:
Q  36 aatataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaac 135  Q
    |||| ||||||||||||||||||||||   || ||||||||||||||||||||||||| ||| |||| ||||||| ||||||  |||  ||||||||| |    
T  12353466 aataaaggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagatttagc 12353368  T
Q  136 tcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
     |  ||||| ||||  | ||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  12353367 cccattgcaattttaattcttttggtcaattttgaccggtcaatgcttacatggcgtgccacgtgtg 12353301  T

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Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 202
Target Start/End: Complemental strand, 30570353 - 30570196
Alignment:
Q  45 taaagtgcac-ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    |||||||||| |||||||||| |||||| ||||| |||||||||||  ||| |||||||||||| || ||||||  |||  ||||||||| | |||||||    
T  30570353 taaagtgcaccttttcccctctaagttttaaaaagttgcaattttgatcct-tatgtacaaaaattagaattttggccccctaagatttagcccttttgc 30570255  T
Q  144 atttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    || |||||||||||||| ||||||||||| ||||||| |||| ||||| ||||||||||    
T  30570254 atctttggtccttttggccaattttgaccagtcaatgtctacgtggcacgccacgtgtg 30570196  T

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Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 8389792 - 8389659
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||| ||||||||||||||||||||  |||||||||||| |||||||||||| ||  |||||||||||||||||||||||  ||  ||||||||||| |     
T  8389792 taggttaaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaacccc 8389693  T
Q  139 tttgcatttttggtccttttggtcaattttgacc 172  Q
    ||| |||||||||||||||||  |||||||||||    
T  8389692 tttacatttttggtccttttgaacaattttgacc 8389659  T

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Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 1824174 - 1824049
Alignment:
Q  47 aagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcat 145  Q
    ||||||| |||||||| || || |||||||||||||||||||||| || ||| |||||||||||||||||||  |||  ||||||||| |  ||||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1824075  T
Q  146 ttttggtccttttggtcaattttgac 171  Q
     |||||||||||||||||||||||||    
T  1824074 ctttggtccttttggtcaattttgac 1824049  T

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Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 1858619 - 1858494
Alignment:
Q  47 aagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcat 145  Q
    ||||||| |||||||| || || |||||||||||||||||||||| || ||| |||||||||||||||||||  |||  ||||||||| |  ||||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcat 1858520  T
Q  146 ttttggtccttttggtcaattttgac 171  Q
     |||||||||||||||||||||||||    
T  1858519 ctttggtccttttggtcaattttgac 1858494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 30568885 - 30569046
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| |||||| |||||||||||| || ||||||||  |   || |||||||||||| |||||| | ||  ||||||||| | | |    
T  30568885 taggctaaagtgcactttccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagcccct 30568984  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgt 201  Q
    |||||| |||||||||||||| ||||| ||||| ||||||| |||| ||||| |||||||||    
T  30568985 ttgcatctttggtccttttggccaattgtgaccagtcaatgtctacgtggcacgccacgtgt 30569046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 10007868 - 10007702
Alignment:
Q  38 tataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    ||||||||||||||||||||||||| |  || ||||||||||||||||||||||||| ||| ||| | |||| ||||||||   ||  ||||||||| |     
T  10007868 tataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcc 10007769  T
Q  137 cttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    | ||||||| |||||||||||| |||||||||||| |  |||| |||||| ||||| ||||||||||    
T  10007768 cctttgcatctttggtccttttcgtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 10007702  T

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Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 201
Target Start/End: Original strand, 18978029 - 18978179
Alignment:
Q  51 gcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttg 150  Q
    |||||||||||| | || |||||||| ||| |||||||||||| ||| |||||||||||||||||||  ||| |||||||||| | | ||||||  ||||    
T  18978029 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgcaactttg 18978128  T
Q  151 gtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgt 201  Q
     |||||||   ||||||||||  |||||||||||| ||||| |||||||||    
T  18978129 atccttttttccaattttgacgggtcaatgcctacgtggcacgccacgtgt 18978179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 22220388 - 22220550
Alignment:
Q  42 ggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| || || ||| ||| ||||||||||||| ||| ||||||| |||||||||||||||  |||  ||||||||| | | ||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatt 22220487  T
Q  141 tgcatttttggtccttttggtcaattttga-cctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| ||||||||||||| |||||||||| |  ||||||||  |  ||||||||||||||||    
T  22220488 tgcatctttggtccttttgatcaattttgagcaagtcaatgctgatttggcatgccacgtgtg 22220550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 30335638 - 30335770
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||| |||||| | |  || ||| ||||||||||||||||||| | ||| ||||||||| ||||||||||||||  ||||||||| | | |    
T  30335638 aggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccct 30335737  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||| ||||||||||||| ||||||||||||    
T  30335738 ttgcatctttggtccttttgttcaattttgacc 30335770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 18488331 - 18488208
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| |||||||||| | || |||| ||||||||||||||||||  |||| |||||| |||| | ||||||| |||||||||||||  || ||||||||    
T  18488331 aaaaagttgcaattttagtcccctatatacaaaaactacaattttggccctctaagatataacccctttgcatctttggtccttttgaccagttttgacc 18488232  T
Q  173 tgtcaatgcctacatggcatgcca 196  Q
     |||||||||||| ||||||||||    
T  18488231 agtcaatgcctacgtggcatgcca 18488208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 2380023 - 2379894
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||  |||||||||| | || ||||||||| ||| ||||||||||| |||||||| ||| ||||||||||  ||| |||||||||| ||| |    
T  2380023 taggctaaagtttacttttcccc-ctaactttcaaaaagttgtaattttggccc-ctatgtacgaaa-ctacaattttggccccttaagatttagctcat 2379927  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||| |||||| |||||||||||||||||||    
T  2379926 ttgcatctttggttcttttggtcaattttgacc 2379894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 8388463 - 8388593
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||| |||| | || ||| ||||| |||||||||| |||| |||||||||||||||| ||||||  |||  ||||||||| | | ||    
T  8388463 aggctaaagtgcactttccccc-ctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctt 8388561  T
Q  141 tgcatttttggtccttttggtcaattttgacc 172  Q
    ||| |||||||||||||||  |||||||||||    
T  8388562 tgcgtttttggtccttttgcccaattttgacc 8388593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 11287779 - 11287937
Alignment:
Q  45 taaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    |||||||||||||| | || | || ||| ||||||||||||||||||||| ||| ||||| |||||||||||||  |||  ||||| ||||||| |||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgc 11287878  T
Q  144 atttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    | ||||| || ||||  |||||||||||| ||||| |||||   |||||||||| ||||    
T  11287879 aattttgatcatttttatcaattttgaccggtcaacgcctatgcggcatgccacatgtg 11287937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 18979220 - 18979074
Alignment:
Q  43 gctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||||||||||||| |  || |||||| |||||||||||||||||| |||  || |||||||||||||||  ||| ||| |||||| | | |||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  142 gcatttttggtccttttggtcaattttgacctgtcaatgcctacatg 188  Q
    |||  |||| ||||||| | ||||||||||  |||||||||||||||    
T  18979120 gcaactttgatcctttttgccaattttgacaggtcaatgcctacatg 18979074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 45114629 - 45114457
Alignment:
Q  30 taatagaatataggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaag 128  Q
    |||||||| | ||||| |||||||||||||| || | || ||||||||||||||||||||||  | ||||||||| |||||||||||||   ||| ||||    
T  45114629 taatagaacaaaggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaatttt-ggcctctaag 45114531  T
Q  129 atttaactcttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||||    |||||  |||  || ||||||| |||||||||| |||||||||||| |||||  |||||||||    
T  45114530 atttaacctcattgcaactttaatcattttggttaattttgaccggtcaatgcctacgtggcacaccacgtgtg 45114457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 24123971 - 24123859
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||||||||||||||||||   || |||| |||| |||||||||| ||   ||||||||| | | ||||||| ||||||||||||||||||||||    
T  24123971 tttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatctttggtccttttggtcaatttt 24123872  T
Q  169 gacctgtcaatgc 181  Q
    |||| || |||||    
T  24123871 gaccggttaatgc 24123859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 165
Target Start/End: Complemental strand, 32207425 - 32207302
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||| |||| | ||  |||||||||||||||||||| | | ||| |||||||||||||||||||  ||  |||||||||| |   ||    
T  32207425 aggctaaagtgcactttccccc-ctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctt 32207327  T
Q  141 tgcatttttggtccttttggtcaat 165  Q
    ||||| |||||||||||||||||||    
T  32207326 tgcatctttggtccttttggtcaat 32207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 17844276 - 17844435
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||| |||  | |||||||||||| |||  ||||||| |||  |||||||||||||||||||||   || | || |||||||   |    
T  17844276 taggctaaagtgcactttcccctccaaagtttcaaaaagttgtgattttggtcct--atgtacaaaaactacaattttggtccct-aacatttaacctct 17844372  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||  || |||||||||||||| ||||||||| | |||||||||||||||||| | ||||||||    
T  17844373 ttatatctttggtccttttggccaattttgatcggtcaatgcctacatggcacgtcacgtgtg 17844435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 22221466 - 22221335
Alignment:
Q  41 aggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||| || | || ||||||||||||||||||||| ||| ||| |||  |||||||||||||| ||||  ||||||||| | | |    
T  22221466 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 22221367  T
Q  140 ttgcatttttggtccttttggtcaattttgac 171  Q
    || ||| |||| ||||||| | ||||||||||    
T  22221366 ttacatctttgatccttttagccaattttgac 22221335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 22227808 - 22227677
Alignment:
Q  41 aggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||| || | || ||||||||||||||||||||| ||| ||| |||  |||||||||||||| ||||  ||||||||| | | |    
T  22227808 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 22227709  T
Q  140 ttgcatttttggtccttttggtcaattttgac 171  Q
    || ||| |||| ||||||| | ||||||||||    
T  22227708 ttacatctttgatccttttagccaattttgac 22227677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 11282006 - 11282138
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||| |||||||||||||| ||| |  || ||| ||||| ||||||||||||||| |||| ||||||||  |||||||| ||||  ||||||||||| |     
T  11282006 taggttaaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccc 11282105  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    |||||| ||||| || ||||| |||||||||||    
T  11282106 tttgcaattttgatctttttgatcaattttgac 11282138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 172
Target Start/End: Complemental strand, 40471244 - 40471117
Alignment:
Q  45 taaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    |||||||||||||||||| |  || ||| |||||||| ||||||||| ||  ||  ||||||||||||||||||| ||| ||||||||||||   ||||     
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggtcca-taaatacaaaaactacaattttagccccttaagatttaacctctttgt 40471146  T
Q  144 atttttggtccttttggtcaattttgacc 172  Q
    || ||||||| ||||||||||||||||||    
T  40471145 atctttggtcattttggtcaattttgacc 40471117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 1823551 - 1823682
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||| |||||| ||| |  || ||| ||||||||||||||||| ||||||| ||||||||||||||||||    ||  ||||||||| | | |    
T  1823551 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccat 1823650  T
Q  140 ttgca-tttttggtccttttggtcaattttga 170  Q
    ||||| |||||||||||||||| |||||||||    
T  1823651 ttgcattttttggtccttttggccaattttga 1823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 1857996 - 1858127
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||| |||||| ||| |  || ||| ||||||||||||||||| ||||||| ||||||||||||||||||    ||  ||||||||| | | |    
T  1857996 aggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccat 1858095  T
Q  140 ttgca-tttttggtccttttggtcaattttga 170  Q
    ||||| |||||||||||||||| |||||||||    
T  1858096 ttgcattttttggtccttttggccaattttga 1858127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 24359808 - 24359938
Alignment:
Q  41 aggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    |||||||||||| ||||| ||||| || ||| ||||| |||| ||||| ||| ||||| |||||||||||||||||| ||||  ||||||||| |   ||    
T  24359808 aggctaaagtgctctttttccctctaacttttaaaaagttgcgatttttgcc-tctatatacaaaaactacaattttgaccccctaagatttagcctatt 24359906  T
Q  141 tgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| ||| |||  |||||||||||||||||    
T  24359907 tgcatctttagtcactttggtcaattttgacc 24359938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 12351920 - 12352082
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||| ||| |||| |  || ||||||||| ||||||||||| ||| ||| ||||||||||||||||||| ||||  ||||||||| |        
T  12351920 aggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcctca 12352019  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| ||||   |||||||| ||||||||||| |||||||| ||  |||| || ||||||||    
T  12352020 ttgcaattttaacccttttggacaattttgaccggtcaatgcatatgtggcgtgtcacgtgtg 12352082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 29968434 - 29968364
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatt 115  Q
    ||||||||||||||||||   || ||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatt 29968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 29043427 - 29043536
Alignment:
Q  70 ttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttg 169  Q
    |||||||| | || |||||| ||| |||||||||||||||||||||||  |||| ||||||||| | | |||| || |||| ||||||| | ||||||||    
T  29043427 ttcaaaaagtcgcgattttgaccccctatgtacaaaaactacaattttttccctctaagatttagcccctttgtatctttgatccttttagacaattttg 29043526  T
Q  170 acctgtcaat 179  Q
    ||| ||||||    
T  29043527 accagtcaat 29043536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 24361251 - 24361164
Alignment:
Q  84 attttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||| | | ||||||||||| ||  ||||  ||||||||||||    
T  24361251 attttggtcctctatgtacaaaaattacaattttaatcctttaagatttagc-catttgcatttttagttttttttatcaattttgacc 24361164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 43661925 - 43661793
Alignment:
Q  41 aggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||| |||||||||||||| | |  || ||||||||| ||||||||||   ||||||||||||||||||| ||||||  |||  ||||||||  | |      
T  43661925 aggctgaagtgcacttttccacccttaactttcaaaaagttgcaattttaatcctctatgtacaaaaactaaaattttggccccctaagatttcgcccaa 43661826  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||| ||||||||||||| ||||||||||||    
T  43661825 ttgcatctttggtccttttgatcaattttgacc 43661793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 73 - 202
Target Start/End: Original strand, 43661297 - 43661427
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| || ||||||||| ||  ||||||||||||||| ||||||  |||  ||||||||| | | ||||||| |||||| ||||||||||| |||||||    
T  43661297 aaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttgcatctttggttcttttggtcaactttgacc 43661396  T
Q  173 -tgtcaatgcctacatggcatgccacgtgtg 202  Q
      ||||| || ||  ||||||||||||||||    
T  43661397 aagtcaacgcatatgtggcatgccacgtgtg 43661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 5514372 - 5514295
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||||||||||||  || | || ||| |||||||||||||||| ||| ||||  ||||||||||||||||||    
T  5514372 taggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaatttt 5514295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 24483143 - 24483195
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccc 93  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccc 24483195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 42982760 - 42982677
Alignment:
Q  40 taggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccc 122  Q
    ||||||||||||||||||||| |||  |||||| ||||| ||| ||||||||||| || |  ||||||||||||||||| ||||    
T  42982760 taggctaaagtgcacttttccacctttaagttttaaaaagttgtaattttggccccctgtaaacaaaaactacaattttgaccc 42982677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 32974037 - 32973907
Alignment:
Q  42 ggctaaagtgcac-ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||| |||||||| | || ||||||||  |||| |||||||||| | |||||  ||||| ||||||||  |||| || | |||| | | ||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccctt 32973938  T
Q  141 tgcatttttggtccttttggtcaattttgac 171  Q
    ||||||||  |||||||||| ||||||||||    
T  32973937 tgcattttcagtccttttggacaattttgac 32973907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 11456636 - 11456696
Alignment:
Q  40 taggctaaagtgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctatg 99  Q
    |||||||||||||||||||| ||| | || ||||||||| ||||||||||||||| |||||    
T  11456636 taggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggccccctatg 11456696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 32968454 - 32968586
Alignment:
Q  40 taggctaaagtgcactttt-cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||| |||| | || ||||||||  |||| |||||||||| | |||||  ||||| ||||||||  |||| || | |||| | |     
T  32968454 taggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaattttggccctctatgttttagcccc 32968553  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    ||||||||||  |||||||||  ||||||||||    
T  32968554 tttgcattttcagtccttttgagcaattttgac 32968586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 36249552 - 36249692
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| |  |||||||||||| ||||||||||||||  ||||| | |||||  |||| ||||| || ||| | ||||   | ||    
T  36249552 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcctcctatgaataaaaatgacaaatttaatcccttatgttttaggccctt 36249651  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgc 181  Q
    |||| | ||  ||||||||  ||||||||||| ||||||||    
T  36249652 tgcaatattaatccttttgtccaattttgaccagtcaatgc 36249692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 2378914 - 2378991
Alignment:
Q  95 ctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    |||| ||||||||| | |||||| |||| ||||||| || |   ||||||| ||||||||||||| ||||||||||||    
T  2378914 ctatatacaaaaaccataattttgaccccttaagatctagcctatttgcatctttggtccttttgatcaattttgacc 2378991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaa 107  Q
    |||||||||||| |||||||| | || |||||||||||||||||||||  || ||| |||||||||    
T  23170098 ggctaaagtgca-ttttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 1436 - 1570
Alignment:
Q  39 ataggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||||||||||| |||||||||| || || ||| ||||||||||||||||| ||| ||||||| |||||||| |||||| ||||  ||||||||| | |    
T  1436 ataggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagccc 1535  T
Q  138 ttttgcatttttggtccttttggtcaattttgacc 172  Q
     ||||||| ||||||||||||||||||||||||||    
T  1536 atttgcatctttggtccttttggtcaattttgacc 1570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 60090 - 60221
Alignment:
Q  42 ggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||| |||| || ||| ||||||||||||||||| ||| ||||||| ||||||||||||||| ||||  || |||||| | | ||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctt 60189  T
Q  141 tgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| ||||||| ||||||||||||||||||    
T  60190 tgcatctttggtctttttggtcaattttgacc 60221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 61559 - 61429
Alignment:
Q  43 gctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||||||||||| | |  || |||||||||||||||||||| |||| ||| |||||||||||| ||||||  |||  || |||||| | |||||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  142 gcatttttggtccttttggtcaattttgacc 172  Q
    |||| ||||||||||||||||||||||||||    
T  61459 gcatctttggtccttttggtcaattttgacc 61429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 202
Target Start/End: Complemental strand, 1829701 - 1829543
Alignment:
Q  45 taaagtgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgc 143  Q
    ||||||||||||||  ||| | || ||| ||||||||||||||||| ||| ||| ||| |||||||||||||||  |||  ||||||||| | | |||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgc 1829602  T
Q  144 atttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    || ||||||| |||||||||||||||||| |||||||||||| |||||  |||||||||    
T  1829601 atctttggtcattttggtcaattttgaccggtcaatgcctacgtggcacaccacgtgtg 1829543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 7314880 - 7315041
Alignment:
Q  42 ggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| |||  ||||| |||||||| ||||  ||||||||| | | ||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccc-ctaagtatcaaaacaacaattttgaccccctaagatttagcccctt 7314978  T
Q  141 tgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| ||||||| ||||||||||||||||| |  |||| |||||| ||||| ||||||||||    
T  7314979 tgcatctttggtcattttggtcaattttgacttattcaacgcctacgtggcaggccacgtgtg 7315041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 16704600 - 16704440
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||| | |  || ||||||||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||||||||| |       
T  16704600 taggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctc 16704501  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgt 199  Q
    ||||||  | || ||||||| |||||||||||   |||||||||||| ||| |||||||||    
T  16704500 tttgcaactatgatcctttttgtcaattttgattggtcaatgcctacgtggtatgccacgt 16704440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 45 - 197
Target Start/End: Complemental strand, 26575150 - 26574999
Alignment:
Q  45 taaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgca 144  Q
    ||||||||||||| || ||| || ||||||||||||||||||||  |||  || |||||||||||||||||||  |||  ||||||||||||| ||||||    
T  26575150 taaagtgcacttt-cctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgca 26575052  T
Q  145 tttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccac 197  Q
      |||| ||||||| | ||||||||||| ||||||| |||| |||||||||||    
T  26575051 actttgatcctttttgccaattttgaccggtcaatgtctacgtggcatgccac 26574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 6842386 - 6842253
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||| |||||||||||||||||   | |||| |||| | |||    
T  6842386 taggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaattttagttccttaaaattt-agtct 6842288  T
Q  139 -tttgcatttttggtccttttggtcaattttgacc 172  Q
     ||||||| |||| ||||||||| |||||||||||    
T  6842287 gtttgcatctttgatccttttggccaattttgacc 6842253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 7316398 - 7316233
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    |||||||||||||||||||||||| |  || ||||||||||||||||||||||||| |||  ||   |||| ||||||||  ||| |||||||||| | |    
T  7316398 ataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagccc 7316299  T
Q  138 ttttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
     ||||||| | ||||||||||||||||||||||| |  |||| |||||| ||||| ||||||||||    
T  7316298 ctttgcatctatggtccttttggtcaattttgacttattcaacgcctacgtggcaagccacgtgtg 7316233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 3333128 - 3333005
Alignment:
Q  41 aggctaaagtgcacttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||| |||||||||||||| | |||||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||| ||||| | | |    
T  3333128 aggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccct 3333029  T
Q  140 ttgcatttttggtccttttggtca 163  Q
    |||||  |||| ||||||| ||||    
T  3333028 ttgcaactttgatccttttagtca 3333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 10786000 - 10785853
Alignment:
Q  55 ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtcc 154  Q
    |||||||| | || ||| ||||| ||||||||||  ||| ||| |||||||||||||||||||||||| |||||||||| | | ||||||  |||| |||    
T  10786000 ttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgcaactttgatcc 10785901  T
Q  155 ttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||   ||||||||||  |||||||| ||||||||| ||||||||||    
T  10785900 tttttaccaattttgactagtcaatgcatacatggcacgccacgtgtg 10785853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 27437825 - 27437959
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||||||||||||||||||| || |  || ||| ||||| ||||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||| |||    
T  27437825 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctc 27437924  T
Q  138 ttttgcatttttggtccttttggtcaattttgacc 172  Q
     ||||||  |||||||||||||| |||||||||||    
T  27437925 ctttgcaactttggtccttttggccaattttgacc 27437959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 8659263 - 8659427
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| |||| ||||| |||||||   |||  ||||||||| | |     
T  8659263 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccc 8659362  T
Q  139 tttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
     |||||  |||||||||||||  |||||||||||| ||||| ||  | |||||||||||| ||||    
T  8659363 attgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 8659427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 3721611 - 3721774
Alignment:
Q  41 aggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||| ||| ||| |||| ||||| | |||||  |||| |||||||||| | |      
T  3721611 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagcccca 3721710  T
Q  140 ttgcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||||||||||||  |||||||||||| ||||| ||  | |||||||||||| ||||    
T  3721711 ttgcaactttggtccttttgaccaattttgacctagtcaacgctgatatggcatgccacatgtg 3721774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 8821871 - 8821991
Alignment:
Q  40 taggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||||||||| ||| |||| ||||| |||||||   |||  ||||||||| |||     
T  8821871 taggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagctcc 8821970  T
Q  139 tttgcatttttggtccttttg 159  Q
     |||||  |||||||||||||    
T  8821971 attgcaactttggtccttttg 8821991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 26574617 - 26574762
Alignment:
Q  40 taggctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||| ||| || |||| || |||||||||||||||||||||  |||||| ||||||||||||| ||||| | || |||||||||| | |     
T  26574617 taggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactac-attttgatcccttaagatttagcccc 26574715  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctac 185  Q
    ||||||  |||| || |||| |||||||||||||  | |||||||||    
T  26574716 tttgcaactttgatcttttttgtcaattttgaccgattaatgcctac 26574762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 26949255 - 26949125
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||| ||||||||||| ||||  | ||| ||||||||||||||||| | | ||||||||||| | ||||||| ||| ||  ||||| ||||||||    
T  26949255 tttcaaaaa-ttgcaattttgcccct--aagtataaaaactacaattttaatcttctaagatttaacccctttgcatctttagtgtttttgatcaatttt 26949159  T
Q  169 gacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||| |||||||||| ||||||| ||||| ||||    
T  26949158 gaccagtcaatgccttcatggcacgccacatgtg 26949125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 27322172 - 27322039
Alignment:
Q  38 tataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||||||||||||||||||||||| | |  |||||||| |||||||||||||||| ||| |||| ||||| ||||||||  |||  ||||| ||| | |    
T  27322172 tataggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagccc 27322073  T
Q  138 ttttgcatttttggtccttttggtcaattttgac 171  Q
     ||||| | ||| ||||||||| || ||||||||    
T  27322072 ctttgcttatttcgtccttttgctctattttgac 27322039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 6840192 - 6840319
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    |||||| ||||||||||| |||||  |||||||||||| |||| ||||||||||  ||  ||||||||||| |||||| ||||| ||||||||||  | |    
T  6840192 taggctgaagtgcactttccccctt-aagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagatttaatccct 6840290  T
Q  140 ttgcatttttggtccttttggtcaatttt 168  Q
    |||||| |||| ||||||||  |||||||    
T  6840291 ttgcatctttgatccttttgaccaatttt 6840319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 202
Target Start/End: Original strand, 29473082 - 29473238
Alignment:
Q  47 aagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcat 145  Q
    |||||||||||||||| |  |||||| ||||| ||||||||||||  | ||||| |||||||  ||||||||  ||||  |||| ||  | | ||||||     
T  29473082 aagtgcacttttccccccttaagttttaaaaagttgcaattttggttccctatgaacaaaaataacaattttggccctccaagaattggcccctttgcaa 29473181  T
Q  146 ttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| ||||||| ||||||||| ||| |||||||||||| ||||||||||| ||||    
T  29473182 ttttgatcctttttgtcaatttttaccggtcaatgcctacgtggcatgccacatgtg 29473238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 202
Target Start/End: Complemental strand, 14823680 - 14823515
Alignment:
Q  39 ataggctaaagtgcactttt--cccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaact 136  Q
    ||||||||||||||||||||  ||||   || ||| |||||||||||||||| ||||  || ||||| |||||||||||||  |||  |||||||||       
T  14823680 ataggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttagaa 14823581  T
Q  137 cttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |  |||||   ||  | ||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  14823580 ccgttgcaaccttaattcttttggtcaattttgaccggtcaatgcctacgtggcacgccacgtgtg 14823515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 3722610 - 3722533
Alignment:
Q  40 taggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    |||||||||||||||||||||| | | || ||||||||||||||||||||| ||||||| |||| ||||| |||||||    
T  3722610 taggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 5658810 - 5658887
Alignment:
Q  95 ctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||||||||||||||||||||| | || |||||||||| | | ||||||  |||| |||||||||||||||||||||    
T  5658810 ctatgtacaaaaactacaattttgatcccttaagatttagcccatttgcaactttgatccttttggtcaattttgacc 5658887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 43 - 202
Target Start/End: Complemental strand, 12382811 - 12382650
Alignment:
Q  43 gctaaagtgcacttttcc-cctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||||||||||| |||| || ||| ||||| ||| ||||||| ||| ||| |||  ||||||| |||||| | ||   |||||||||| |||||    
T  12382811 gctaaagtgcacttttccacctctaatttttaaaaatttgtaattttgaccccctaagtattaaaactataattttgatccccaaagatttaaccctttt 12382712  T
Q  142 gcatttttggtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    |||| |||||||||||| |  ||||||||| | ||||| || ||  ||||||||||||||||    
T  12382711 gcatctttggtccttttagctaattttgacttggtcaacgcttatttggcatgccacgtgtg 12382650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 8660305 - 8660174
Alignment:
Q  41 aggctaaagtgcacttttcccct-cgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||||||| | || ||||||||||||||||||||| ||| ||| |||| ||||| |||||||   |||  ||||||||| |||      
T  8660305 aggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgaccc-ctaagtaccaaaaccacaatttagcccccctaagatttagctcca 8660207  T
Q  140 ttgcatttttggtccttttggtcaattttgacc 172  Q
    |||||  |||| ||||||||  |||||||||||    
T  8660206 ttgcaactttgatccttttgaccaattttgacc 8660174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 17496825 - 17496928
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt-aaccctttaagatttaactcttttgcatttttggtccttttggtcaattt 167  Q
    |||||||||||| |||||||  ||||||| ||||||||||| |||||||   |||  |||||||||||   ||||||| ||||||||||||| |||||||    
T  17496825 tttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaacctctttgcatctttggtccttttgatcaattt 17496924  T
Q  168 tgac 171  Q
    ||||    
T  17496925 tgac 17496928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 8822894 - 8822819
Alignment:
Q  42 ggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    |||||||||||||||||||| ||  || ||||||||||||||||||||| ||| ||| |||| ||||| |||||||    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaattt 8822819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 26717144 - 26717057
Alignment:
Q  111 caattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc-tgtcaatgcctacatggcatgccac 197  Q
    ||||||| |||| |||||||||| ||||||||||  |||| |||||||| ||||||||||||  |||||||| ||  |||||||||||    
T  26717144 caattttgaccccttaagatttagctcttttgcaactttgatccttttgatcaattttgaccaagtcaatgcttaattggcatgccac 26717057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 12350832 - 12350889
Alignment:
Q  75 aaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta 133  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||  |||||||||    
T  12350832 aaacttgcaattttgaccc-ctatgtataaaaactacaattttaaccccctaagattta 12350889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 27318312 - 27318389
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattt 116  Q
    |||||||||||||||| ||| ||| | |  |||||||| |||||||||||||||| ||| |||| ||||| |||||||    
T  27318312 ataggctaaagtgcaccttttccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 27318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 202
Target Start/End: Original strand, 14822358 - 14822521
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagattta-actc 137  Q
    ||||||| |||||||||||| || |  || |||||||||||||||||||||||||  || ||| | |||||||||||||  |||  |||||||||  |||    
T  14822358 taggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttagtctc 14822457  T
Q  138 ttttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
      |||||  |||  |||||||  || ||||||||| |||||||| ||| ||||| ||||||||||    
T  14822458 -attgcaactttaatccttttaatctattttgaccggtcaatgcttacgtggcacgccacgtgtg 14822521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 3333149 - 3333224
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttt 117  Q
    |||||||||| |||||||||||  |||||| ||||| |||||| |||| ||| ||||| | |||||||| ||||||    
T  3333149 ggctaaagtgaacttttcccctataagtttgaaaaaattgcaaatttgaccccctatgaataaaaactataatttt 3333224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 3333571 - 3333496
Alignment:
Q  96 tatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgac 171  Q
    |||| ||||||||||||||||||||||| || |||||| | | || |||  |||| ||||||||| ||||||||||    
T  3333571 tatgaacaaaaactacaattttaaccctctatgatttagccccttcgcaactttgatccttttggccaattttgac 3333496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 4597712 - 4597652
Alignment:
Q  39 ataggctaaagtgcacttttc-ccctcgaagtttcaaaaacttgcaattttggccctctat 98  Q
    |||||||||| | |||||||| ||||| |||||||||||  ||||||||||||||| ||||    
T  4597712 ataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctat 4597652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 27443860 - 27443912
Alignment:
Q  151 gtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||||| ||||||||||| | |||||||| |||||| |||||||||||||    
T  27443860 gtccttttgttcaattttgactttgtcaatgcttacatgtcatgccacgtgtg 27443912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 27448017 - 27447961
Alignment:
Q  39 ataggctaaagtgcacttttcccctc-gaagtttcaaaaacttgcaattttggccct 94  Q
    |||||||||||||||||||||||| |  |||||| ||||| || |||||||||||||    
T  27448017 ataggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccct 27447961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 34834684 - 34834632
Alignment:
Q  38 tataggctaaagtgcacttttccc-ctcgaagtttcaaaaacttgcaattttg 89  Q
    |||||| ||||||||||||||||| | | || |||||||||||||||||||||    
T  34834684 tataggttaaagtgcacttttccctccctaactttcaaaaacttgcaattttg 34834632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 171
Target Start/End: Original strand, 19486 - 19618
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||| |||||||| |  || |||||||| |||||||||||||||| ||| ||| ||||||||||||||| | ||  ||||||||||| |     
T  19486 taggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccc 19585  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
    ||||||| |||| || |||||||||||||||||    
T  19586 tttgcatctttgatcattttggtcaattttgac 19618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 49537 - 49403
Alignment:
Q  39 ataggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactc 137  Q
    ||||||||||||||||||||| || |  || ||| ||||| ||||||||||||||| ||||  | ||||||||||||||| ||||  ||||||||| |||    
T  49537 ataggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctc 49438  T
Q  138 ttttgcatttttggtccttttggtcaattttgacc 172  Q
     ||||||  |||||||||||||| |||||||||||    
T  49437 ctttgcaactttggtccttttggccaattttgacc 49403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 39341 - 39397
Alignment:
Q  39 ataggctaaagtgcacttttcccctc-gaagtttcaaaaacttgcaattttggccct 94  Q
    |||||||||||||||||||||||| |  |||||| ||||| || |||||||||||||    
T  39341 ataggctaaagtgcacttttccccccttaagttttaaaaagttacaattttggccct 39397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 43501 - 43449
Alignment:
Q  151 gtccttttggtcaattttgacct-gtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||||||| ||||||||||| | |||||||| |||||| |||||||||||||    
T  43501 gtccttttgttcaattttgactttgtcaatgcttacatgtcatgccacgtgtg 43449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 198
Target Start/End: Original strand, 17468 - 17627
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||| ||| |  || ||| ||||||||||||||||||||| ||| |||||||||||||||||||  |||   |||| ||| | |     
T  17468 taggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccc 17567  T
Q  139 tttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacg 198  Q
    |||||| ||| | || ||||   ||||||||||| |||||||||||| ||||||||||||    
T  17568 tttgcaatttcgatcttttttaccaattttgaccggtcaatgcctacgtggcatgccacg 17627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 191
Target Start/End: Complemental strand, 18877 - 18727
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    ||||||||||||||||| |||||  || ||| ||||| |||||||||||| || ||| |||||||||||| ||||||  ||| |||| ||||| | |  |    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagccccat 18778  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggca 191  Q
    ||||  |||  || |||||||||||||||||| |||||||||||| |||||    
T  18777 tgcaactttaatcattttggtcaattttgaccggtcaatgcctacgtggca 18727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 233 - 394
Alignment:
Q  42 ggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttt 140  Q
    |||||||||||||||| |||| |  || ||||||||| |||||||||||| || |||||||||||||||| ||||||   ||  ||||| ||| | | ||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccctt 332  T
Q  141 tgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||||| |||| |||||||   ||||||||||| ||||| |||||  ||||||||||||||||    
T  333 tgcatatttgatcctttttcccaattttgaccggtcaacgcctatgtggcatgccacgtgtg 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 73 - 202
Target Start/End: Complemental strand, 1047 - 918
Alignment:
Q  73 aaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttgacc 172  Q
    ||||| |||||||||||| ||  ||||||||||||||| ||||||  |||   |||| ||| | | ||||||| ||||||||||||   |||||||||||    
T  1047 aaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagcccctttgcatatttggtcctttttcccaattttgacc 948  T
Q  173 tgtcaatgcctacatggcatgccacgtgtg 202  Q
     ||||| || ||| ||||||||||||||||    
T  947 ggtcaacgcttacgtggcatgccacgtgtg 918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 5541 - 5408
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||||||||||| |  || ||||||||||||||||||||| |||  || |||||||||||||||||||  ||| |||||||||| | |     
T  5541 taggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccc 5442  T
Q  139 tttgcatttttggtccttttggtcaattttgacc 172  Q
     || ||  |||| |||||||||| ||||||||||    
T  5441 attacaaatttgatccttttggttaattttgacc 5408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 4440 - 4573
Alignment:
Q  40 taggctaaagtgcac-ttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    ||||||||||||||| |||||||| | || |||||||||||| ||||||| ||||  || ||||||||| |||||||||| |||  ||| ||||| | |     
T  4440 taggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagcccc 4539  T
Q  139 tttgcatttttggtccttttggtcaattttgacc 172  Q
     || ||  ||||||| |||||||| |||||||||    
T  4540 attacaaatttggtcattttggtcgattttgacc 4573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 159
Target Start/End: Original strand, 6341 - 6461
Alignment:
Q  40 taggctaaagtgcacttttcccctcg-aagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||| |||||||||||||||| | |  |||||||||||| || | ||||| |||| ||||||||||||||||||||||| ||||  ||||||||| |  |    
T  6341 taggttaaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttgaccccctaagatttagcctt 6440  T
Q  139 tttgcatttttggtccttttg 159  Q
    ||||||| |||||||||||||    
T  6441 tttgcatctttggtccttttg 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 9129 - 8998
Alignment:
Q  39 ataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactct 138  Q
    |||||||||||||||||||| ||  |  | ||||||||| |||  ||||| |||  |||||||||||||||||||||||  |||  ||||||||| | ||    
T  9129 ataggctaaagtgcactttttcctccttaatttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttggccc-ctaagatttagccct 9031  T
Q  139 tttgcatttttggtccttttggtcaattttgac 171  Q
      ||||| |||| ||||||||  ||||||||||    
T  9030 catgcatctttgatccttttgaccaattttgac 8998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 40 - 202
Target Start/End: Complemental strand, 3410 - 3248
Alignment:
Q  40 taggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctt 139  Q
    ||||||||||||||||||||||| |  | |||||||||||| |||||||| |||  || |||||||||||| ||||||   ||  ||||||||| | | |    
T  3410 taggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccct 3311  T
Q  140 ttgcatttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||||  |||| ||||||| | ||||||| ||  |||||||||||| | ||||||||| ||||    
T  3310 ttgcaactttgatcctttttgccaatttttactggtcaatgcctacgtagcatgccacatgtg 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 13182 - 13305
Alignment:
Q  31 aatagaatataggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagat 130  Q
    |||| |||| |||||||||||||||||||||| | || ||| ||||| |||  |||||| ||  |||||||| ||||||||||||||   ||  ||||||    
T  13182 aataaaataaaggctaaagtgcacttttcccc-ctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagat 13280  T
Q  131 ttaactcttttgcatttttggtcct 155  Q
    ||||||||||||||| |||||||||    
T  13281 ttaactcttttgcatatttggtcct 13305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 7532 - 7394
Alignment:
Q  26 tgcttaatagaatataggctaaagtgcacttttcccc-tcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctt 124  Q
    |||| |||| |||| |||||||||||||||| ||||| || |||||| ||||| || | |||||| ||| ||||||||| ||||||||||||| ||||      
T  7532 tgctcaataaaataaaggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccc 7433  T
Q  125 taagatttaactcttttgcatttttggtccttttggtca 163  Q
    ||||||||| | | ||||||  |||| ||||||| ||||    
T  7432 taagatttagcccctttgcaactttgatccttttagtca 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 7538 - 7614
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaatttta 118  Q
    |||||||||||||||| |||||  |||||| ||||| ||| || |||| ||| ||||| ||||||||||||||||||    
T  7538 ggctaaagtgcactttccccctataagtttgaaaaagttgtaaatttgaccccctatgaacaaaaactacaatttta 7614  T

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Target: scaffold0186 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 23081 - 23152
Alignment:
Q  42 ggctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaat 114  Q
    ||||||||||||||||||||| | || ||||||||||||||||||||| ||||||| |||| ||||| |||||    
T  23081 ggctaaagtgcacttttcccc-ctaactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaat 23152  T

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Target: scaffold0059 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 3703 - 3836
Alignment:
Q  69 tttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaatttt 168  Q
    ||||||||||||||||||||||||| ||  ||| | |||||| |||||||  ||  ||||||||| |    |||||  |||  || ||||||||||||||    
T  3703 tttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagccgcattgcaactttaatctttttggtcaatttt 3802  T
Q  169 gacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    |||  |||||||||||| ||||| ||||||||||    
T  3803 gactggtcaatgcctacgtggcacgccacgtgtg 3836  T

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Target: scaffold0059; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 202
Target Start/End: Complemental strand, 4829 - 4670
Alignment:
Q  43 gctaaagtgcacttttcccctcgaagtttcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttg 142  Q
    ||||||||||||||| || | | || ||| |||||| |||||||||||||| |||  |||| ||||||||||||| ||||| |||  |||| | |  |||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccctctaaattttagccccattg 4730  T
Q  143 catttttggtccttttggtcaattttgacctgtcaatgcctacatggcatgccacgtgtg 202  Q
    ||  |||  ||||||||  |||||||||||  ||||||||||| || |||| || |||||    
T  4729 caactttaatccttttgaccaattttgaccgatcaatgcctacgtgacatgtcatgtgtg 4670  T

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Target: scaffold0093 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 2564 - 2435
Alignment:
Q  43 gctaaagtgcacttttcccctcgaagtttcaaaaa-cttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||||||||||||| | || ||||||||| |||||||||||| ||| ||| |||||||||| || |||||  |||  || |||||| ||   ||    
T  2564 gctaaagtgcacttttcccc-ctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacatt 2466  T
Q  142 gcatttttggtccttttggtcaattttgacc 172  Q
    |||  |||  |||||||||||||||||||||    
T  2465 gcaaatttcatccttttggtcaattttgacc 2435  T

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Target: scaffold0093; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 7187 - 7058
Alignment:
Q  43 gctaaagtgcacttttcccctcgaagtttcaaaaa-cttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactctttt 141  Q
    |||||||||||||||||||| | || ||||||||| |||||||||||| ||| ||| |||||||||| || |||||  |||  || |||||| ||   ||    
T  7187 gctaaagtgcacttttcccc-ctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagctacatt 7089  T
Q  142 gcatttttggtccttttggtcaattttgacc 172  Q
    |||  |||  |||||||||||||||||||||    
T  7088 gcaaatttcatccttttggtcaattttgacc 7058  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 48339 - 48437
Alignment:
Q  71 tcaaaaacttgcaattttggccctctatgtacaaaaactacaattttaaccctttaagatttaactcttttgcatttttggtccttttggtcaattttga 170  Q
    |||||||||||||||||  | || |||||||||||||||| ||||||   ||  |||||||||   | ||||||| |||||||| |||||||||||||||    
T  48339 tcaaaaacttgcaattt--gacccctatgtacaaaaactataattttggtcccctaagatttattccctttgcatctttggtcc-tttggtcaattttga 48435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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