View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0551_high_9 (Length: 228)
Name: NF0551_high_9
Description: NF0551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0551_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 49070708 - 49070566
Alignment:
| Q |
1 |
tttacggttccattgagggacatagaggcgtcacgttctctttgagagagataagaaacaaaggcatagacacggctt-ttttccccctgattcaaatct |
99 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| |
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| T |
49070708 |
tttacggttccattgagggacatagaggcgtcacgttctctttgagagagataagagacaaaggcatagacacggcttttttttcccctgattcaaatct |
49070609 |
T |
|
| Q |
100 |
tgcaacaccctcacactagccacatttccaaatttaccaaaga |
142 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
49070608 |
tgcaacaccctcacactagccacatttccaaatttaccaaaga |
49070566 |
T |
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