View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0551_low_14 (Length: 274)
Name: NF0551_low_14
Description: NF0551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0551_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 52 - 242
Target Start/End: Original strand, 43894124 - 43894314
Alignment:
| Q |
52 |
aaaatattcccgaactgaaattacacaaatgatggaatggttgtcaccaatactaattcggctgataatgcattattttccgcaccgtaagagctagcac |
151 |
Q |
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| T |
43894124 |
aaaatattcccaaactgaaattacacaaatgatggaatggctgtcaccaatactaattcggctgataatgcattattttccgcaccgtaagagctagcac |
43894223 |
T |
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| Q |
152 |
ggaaacttacacaaagaatacaacaacaattaaatcttattccacttactagagttacttaagtgaattaaattatattataatgctctgt |
242 |
Q |
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| T |
43894224 |
gaaaacttacacaaagaatacaacaacaattaaatcttattccacttactagagttaattacgtgaattaaattatattataatgttctgt |
43894314 |
T |
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