View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0552-Insertion-1 (Length: 805)
Name: NF0552-Insertion-1
Description: NF0552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0552-Insertion-1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 732; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 732; E-Value: 0
Query Start/End: Original strand, 7 - 785
Target Start/End: Complemental strand, 36314925 - 36314145
Alignment:
| Q |
7 |
agttgggagttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaacc |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
36314925 |
agttgggagttaatcgaaaaacaggacataattggtcattggtttcatggttgactcctttgctacaaacgtcaggtgaatttagtcttgaatgggaacc |
36314826 |
T |
|
| Q |
107 |
aaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgt |
206 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36314825 |
aaaacaaggtgaattgaacatc-aaaaaacgcgggaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccagtgaatgt |
36314727 |
T |
|
| Q |
207 |
tcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcg |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36314726 |
tcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtttatatgatgggagctatcctcg |
36314627 |
T |
|
| Q |
307 |
aagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaat |
406 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314626 |
aagggcaagttaacaagtggtgttgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaat |
36314527 |
T |
|
| Q |
407 |
gggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacacc---aagcaaaatggacaatgcatcatcatatgaatggaa |
503 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314526 |
gggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaaaaagcaaaatggacaatgcatcatcatatgaatggaa |
36314427 |
T |
|
| Q |
504 |
tgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattc |
603 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314426 |
tgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattc |
36314327 |
T |
|
| Q |
604 |
tattcatggaattcgacacaagatgttgatttagacagtcagggtaactttaacgtcttggtaatgccaacaaaatcagctctacgtaagttataatatc |
703 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36314326 |
tattcatggaattcgacacaagatgttgatttagacagtcagggtaactttaacgtcttggtaatgccaacaaaatcagctctacgtaagttataatatc |
36314227 |
T |
|
| Q |
704 |
attttaattagataggttcaaagtgattatttactgcttatttcaccgtagacatagccttccttcatactattagatacaa |
785 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
36314226 |
attttaattagataggttcaaagtgattatttactgcttatttcaccgtagacatagccttccttcataccattagatacaa |
36314145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 292; Significance: 1e-163; HSPs: 42)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 7 - 667
Target Start/End: Complemental strand, 19504331 - 19503690
Alignment:
| Q |
7 |
agttgggagttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaacc |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||| ||||||||| |
|
|
| T |
19504331 |
agttgggagttaatcgaaaaacaggacataattggtcattggtttcatggttgactccttcgctaccaactccaggtaaatttagtcttgtatgggaacc |
19504232 |
T |
|
| Q |
107 |
aaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgt |
206 |
Q |
| |
|
|||| || ||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| | || || |
|
|
| T |
19504231 |
aaaagaacgtgaattgaacataaggaaaa-gcggcaaagtgcattggaaaagcggaaaacttaaaagcaatggaatattcgagaacattcccacaaaagt |
19504133 |
T |
|
| Q |
207 |
tcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcg |
306 |
Q |
| |
|
||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||| ||||| |
|
|
| T |
19504132 |
tcaacgtatatatcagtacattattgtctctaacaagaatgaagattctttcgctttcgaagttaaagatgggaagtttgcacgatggcaactaacctcg |
19504033 |
T |
|
| Q |
307 |
aagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaat |
406 |
Q |
| |
|
||||| | |||| | ||| |||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19504032 |
aaggggaggttagta---ggtcatga------------tggagagattgggaatgcagatatgtgttatggatataatagcaatggagggtgccaaaaat |
19503948 |
T |
|
| Q |
407 |
gggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgt |
506 |
Q |
| |
|
||||||| ||||||| |||||||||| |||||||||||||||||||| | |||||||||| || | ||||||||| || | | |||| | |||| |
|
|
| T |
19503947 |
gggaggaaataccaaattgtagggaaaatggtgaggtttttcagaaaattgcgggaacacca---aacgtagacaatgcaacaacgtttgaacaggatgt |
19503851 |
T |
|
| Q |
507 |
aatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctat |
606 |
Q |
| |
|
| |||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| |||| |||| |||||||||| |||||||| |
|
|
| T |
19503850 |
gacttatagttacagtgattgcaagattagatgttggagaaattgtaattgcaatggattccaggaattttatggtaatgggactggatgtatattctat |
19503751 |
T |
|
| Q |
607 |
tcatggaattcgacacaagatgttgatttagacagtcagggtaactttaacgtcttggtaa |
667 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||| |||||| |||||||||||| |
|
|
| T |
19503750 |
tcatggaattcgacacaagatgttgatttggtgagtcagaataacttctacgtcttggtaa |
19503690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 7 - 667
Target Start/End: Original strand, 19345012 - 19345653
Alignment:
| Q |
7 |
agttgggagttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaacc |
106 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
19345012 |
agttgggagttaatcgaaaaactggacataattggtcattggtttcatggatgactccttcgctaccaactccaggtgaatttagtcttgaatgggaacc |
19345111 |
T |
|
| Q |
107 |
aaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgt |
206 |
Q |
| |
|
|||| ||||||||||||||||| | |||| |||||| || |||||||||||| ||||||||||| ||||||||||| |||||||||||||| | ||| || |
|
|
| T |
19345112 |
aaaagaaggtgaattgaacatcaagaaaa-gcggcatagcgtattggaaaagcggaaaacttaatagcaatggaatattcgagaacattcccacgaaagt |
19345210 |
T |
|
| Q |
207 |
tcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcg |
306 |
Q |
| |
|
||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||| ||||| |
|
|
| T |
19345211 |
tcaacgtatatatcagtacattattgtctctaacaagaatgaagattctttcgctttcgaagttaaagatgggaagtttgcacgatggcaactaacctcg |
19345310 |
T |
|
| Q |
307 |
aagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaat |
406 |
Q |
| |
|
|| || | |||| | ||| |||| |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19345311 |
aacgggaggttagta---ggtcatga------------tggagatattgggaatgcagatatgtgttatggatataatagcaatggagggtgccaaaaat |
19345395 |
T |
|
| Q |
407 |
gggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgt |
506 |
Q |
| |
|
||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||| | | ||| ||| | || | ||||| |||| |
|
|
| T |
19345396 |
gggaggaaataccaaattgtagggaaaatggtgaggtttttcagaaaatggtgggaacaccaacc---ttagactatgaaacagtgtttgaattcgatgt |
19345492 |
T |
|
| Q |
507 |
aatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctat |
606 |
Q |
| |
|
| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| |||| |||| |||||||||| ||||||| |
|
|
| T |
19345493 |
gacttatagttacagtgattgcaagattagatgttggagaaattgttattgcaatggattccaggaattttatggtaatgggactggatgtacattctat |
19345592 |
T |
|
| Q |
607 |
tcatggaattcgacacaagatgttgatttagacagtcagggtaactttaacgtcttggtaa |
667 |
Q |
| |
|
||||||||||| |||||| |||||||||| | |||||| |||||| |||||||||||| |
|
|
| T |
19345593 |
tcatggaattcaacacaatatgttgatttggtgagtcagaataacttctacgtcttggtaa |
19345653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 85 - 632
Target Start/End: Original strand, 19410701 - 19411229
Alignment:
| Q |
85 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgt |
184 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||| | | |
|
|
| T |
19410701 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaa-gcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattat |
19410799 |
T |
|
| Q |
185 |
tcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtt |
284 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
19410800 |
tcgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagtt |
19410899 |
T |
|
| Q |
285 |
tatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataat |
384 |
Q |
| |
|
| || |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| ||||||||| |
|
|
| T |
19410900 |
tgcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataat |
19410984 |
T |
|
| Q |
385 |
agcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatg |
484 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| ||||||| || |||||| |
|
|
| T |
19410985 |
agtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagc---atagacaatt |
19411081 |
T |
|
| Q |
485 |
catcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataa |
584 |
Q |
| |
|
|| || ||||||||| | || | |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| | || ||| ||| |
|
|
| T |
19411082 |
caacaacatatgaattcgacgtgacttatagttacagtgattgcaagatcagatgttggaaaaattgtagttgcaatggattccaactatattatagtaa |
19411181 |
T |
|
| Q |
585 |
tttgactggatgtgtattctattcatggaattcgacacaagatgttga |
632 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
19411182 |
tatgactggatgtgtattcctttcatggaattcgacacaatatgttga |
19411229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 7 - 443
Target Start/End: Original strand, 19390434 - 19390864
Alignment:
| Q |
7 |
agttgggagttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaacc |
106 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| | || ||| ||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
19390434 |
agttgggagttaatcgaaaaacaggacataattggtcattggtt--------ggcttcttcgctaccaactccaggtgaatttagtcttgaatgggaacc |
19390525 |
T |
|
| Q |
107 |
aaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgt |
206 |
Q |
| |
|
||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||| ||||||| |
|
|
| T |
19390526 |
aaaacaaggggaattgaacatc-aagaaacgcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggtttattcgagaacattccggtgaatgt |
19390624 |
T |
|
| Q |
207 |
tcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgggagctatcctcg |
306 |
Q |
| |
|
||||| ||| ||||| ||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
19390625 |
tcaacgtatatatcaatacattattgtctctaacaaggatgaagattcttttgctttcgaagttaaagatgggaagtttatacgatggttcattacctcg |
19390724 |
T |
|
| Q |
307 |
aagggcaagttaacaagtggtgatga---agacaatgctagtggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaa |
403 |
Q |
| |
|
||||| | ||||| ||||| |||||| ||| | | ||||| ||| |||| |||||||||| ||||||||||||||||| ||| |||||||||| |
|
|
| T |
19390725 |
aaggggaggttaataagtgctgatgagggagagatttatagtgcagacattgctaatgcagataagtgttatggatataatagtgatgccgggtgccaaa |
19390824 |
T |
|
| Q |
404 |
aatgggaggatataccaacttgtagggaacctggtgaggt |
443 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
19390825 |
aatgggaggatataccaacttgcagggaccctcgtgaggt |
19390864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 85 - 630
Target Start/End: Original strand, 19592051 - 19592574
Alignment:
| Q |
85 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgt |
184 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||| | | |
|
|
| T |
19592051 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaa-gcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattat |
19592149 |
T |
|
| Q |
185 |
tcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtt |
284 |
Q |
| |
|
||||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
19592150 |
tcgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagtt |
19592249 |
T |
|
| Q |
285 |
tatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataat |
384 |
Q |
| |
|
| || |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| || |
|
|
| T |
19592250 |
tgcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---at |
19592331 |
T |
|
| Q |
385 |
agcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatg |
484 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| || | ||||||| |
|
|
| T |
19592332 |
agtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtttttcagaaaaaggcgggaacacca---aacgtagacaatg |
19592428 |
T |
|
| Q |
485 |
catcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataa |
584 |
Q |
| |
|
|| || | | |||| | |||| | |||| ||||||||||||||||||| ||||||||||||||||||| ||||| || |||| ||||| |||||||| |
|
|
| T |
19592429 |
caacaacgtttgaacaggatgtgacttatagttacagtgattgcaagattagatgttggagaaattgtaattgcagtgcattccaagaatattatgataa |
19592528 |
T |
|
| Q |
585 |
tttgactggatgtgtattctattcatggaattcgacacaagatgtt |
630 |
Q |
| |
|
| |||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
19592529 |
tgggactggatgtgtattccattcatggaattcgacacaatatgtt |
19592574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 85 - 630
Target Start/End: Complemental strand, 19540647 - 19540124
Alignment:
| Q |
85 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgt |
184 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||| | | |
|
|
| T |
19540647 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaa-gcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattat |
19540549 |
T |
|
| Q |
185 |
tcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtt |
284 |
Q |
| |
|
||||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
19540548 |
tcgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagtt |
19540449 |
T |
|
| Q |
285 |
tatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataat |
384 |
Q |
| |
|
| || |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| || |
|
|
| T |
19540448 |
tgcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---at |
19540367 |
T |
|
| Q |
385 |
agcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatg |
484 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||| || |||||| |
|
|
| T |
19540366 |
agtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtgtttcagaaaaaggcgggaagaccaagc---attgacaatt |
19540270 |
T |
|
| Q |
485 |
catcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataa |
584 |
Q |
| |
|
|| || | | |||| | |||| | |||| |||||||||||||||||||||||||||||| |||||||| ||||| || |||| ||||| |||||||| |
|
|
| T |
19540269 |
caacaacgtttgaagaggatgtgacttatagttacagtgattgcaagatgagatgttggaaaaattgtaattgcagtgcattccaagaatattatgataa |
19540170 |
T |
|
| Q |
585 |
tttgactggatgtgtattctattcatggaattcgacacaagatgtt |
630 |
Q |
| |
|
| |||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
19540169 |
tgggactggatgtgtattccattcatggaattcgacacaatatgtt |
19540124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 85 - 617
Target Start/End: Complemental strand, 19469723 - 19469213
Alignment:
| Q |
85 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgt |
184 |
Q |
| |
|
|||||| ||||||||||| ||||||| |||| |||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||| | | |
|
|
| T |
19469723 |
aatttaatcttgaatggggaccaaaagaaggagaattgaacatcaagaaaa-gcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattat |
19469625 |
T |
|
| Q |
185 |
tcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtt |
284 |
Q |
| |
|
||||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
19469624 |
tcgagaatattccggccaatgttcaaaataggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagtt |
19469525 |
T |
|
| Q |
285 |
tatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataat |
384 |
Q |
| |
|
| || |||||| ||| |||||| || | |||| | |||||||| |||| | |||| ||||||||||| ||||| |||| || |
|
|
| T |
19469524 |
tgcacaatgggaactaatctcgaaagggaggttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggat---at |
19469443 |
T |
|
| Q |
385 |
agcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagcaaaatggacaatg |
484 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||| || |||||| |
|
|
| T |
19469442 |
agtgatggaggatgccaaaaatgggaggatataccaacttgcagggaacctggtgaggtgtttcagaaaaaggcgggaagaccaagc---attgacaatt |
19469346 |
T |
|
| Q |
485 |
catcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataa |
584 |
Q |
| |
|
|| || | | |||| | |||| | |||| |||||||||||||||||||||||||||||| |||||||| ||||| || |||| ||||| |||||||| |
|
|
| T |
19469345 |
caacaacgtttgaagaggatgtgacttatagttacagtgattgcaagatgagatgttggaaaaattgtaattgcagtgcattccaagaatattatgataa |
19469246 |
T |
|
| Q |
585 |
tttgactggatgtgtattctattcatggaattc |
617 |
Q |
| |
|
| |||||||||||||||| ||||||||||||| |
|
|
| T |
19469245 |
tgggactggatgtgtattccattcatggaattc |
19469213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 85 - 472
Target Start/End: Original strand, 19457720 - 19458091
Alignment:
| Q |
85 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgt |
184 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||| | | |
|
|
| T |
19457720 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaa-gcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattat |
19457818 |
T |
|
| Q |
185 |
tcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtt |
284 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
19457819 |
tcgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagtt |
19457918 |
T |
|
| Q |
285 |
tatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataat |
384 |
Q |
| |
|
| || |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| ||||||||| |
|
|
| T |
19457919 |
tgcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataat |
19458003 |
T |
|
| Q |
385 |
agcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
472 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| |||||||| |
|
|
| T |
19458004 |
agtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagca |
19458091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 85 - 472
Target Start/End: Complemental strand, 19523358 - 19522987
Alignment:
| Q |
85 |
aatttagtcttgaatgggaaccaaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgt |
184 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||| | | |
|
|
| T |
19523358 |
aatttaatcttgaatgggaaccaaaacaaggtgaattgaacatcaagaaaa-gcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattat |
19523260 |
T |
|
| Q |
185 |
tcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtt |
284 |
Q |
| |
|
||||||| ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
19523259 |
tcgagaatattccggccaatgttcaaagtaggtatcagtacattattgtctctaacaaggatgaagattctttcacgttcgaagttaaagatgggaagtt |
19523160 |
T |
|
| Q |
285 |
tatacgatgggagctatcctcgaagggcaagttaacaagtggtgatgaagacaatgctagtggagaaattggaaatgcagatatatgttatggatataat |
384 |
Q |
| |
|
| || |||||| |||||||||||||| |||||| | |||||||| |||| | |||| ||||||||||| ||||| ||||||||| |
|
|
| T |
19523159 |
tgcacaatgggaactatcctcgaaggggaagttagta---ggtgatga------------tggatatattgctaatgcagatatgtgttacggatataat |
19523075 |
T |
|
| Q |
385 |
agcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaagca |
472 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||| |||||||| |
|
|
| T |
19523074 |
agtgatggagggtgccaaaaatgggaggatataccaacttgcagggaacctggtgagatgtttcagaaaaaggcgggaagaccaagca |
19522987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 15 - 294
Target Start/End: Original strand, 19337304 - 19337582
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaag |
114 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||| ||||| ||| || ||||| |||| |||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
19337304 |
gttaatcgtaaaacaggacataattggtcattggtttcacggttggctcattcgctaccaactccaggtgaacttagtcttgaatgggaaccaaaagaag |
19337403 |
T |
|
| Q |
115 |
gtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacata |
214 |
Q |
| |
|
|||||||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| || |
|
|
| T |
19337404 |
gtgaattgaacatcaggaaaa-gtggcaaagtgcattggaaaagtggaaaactcaaaagcaatggaatgttcgagaacattcctgcgaaagttcaacgta |
19337502 |
T |
|
| Q |
215 |
tgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgg |
294 |
Q |
| |
|
| || |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19337503 |
tataccagtacattattgtgtctaacaaggatgaagattcttttgcttttgaagttaaagatgggaaatttatacgatgg |
19337582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 15 - 294
Target Start/End: Original strand, 19355324 - 19355602
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaag |
114 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||||| ||| || || || ||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
19355324 |
gttaatcgaaaaacaggacataattggtcattggtttcacggttggctcattcgcgaccaacttcaggtgaatttagtcttgaatgggaaccaaaagaag |
19355423 |
T |
|
| Q |
115 |
gtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacata |
214 |
Q |
| |
|
||||||||||||| |||| ||||||||||| |||||||||| |||||||||| ||| |||||||| ||||||||||||||| ||| |||||| || |
|
|
| T |
19355424 |
gtgaattgaacataaggaaaa-gcggcaaagtgcattggaaaagcggaaaacttagaagtaatggaatattcgagaacattccagcgaaagttcaaagta |
19355522 |
T |
|
| Q |
215 |
tgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaagtttatacgatgg |
294 |
Q |
| |
|
| |||| |||||||||||| ||||||||| ||||||||||||| ||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
19355523 |
tatatcggtacattattgtgtctaacaaggatgaagattcttttgctttcgaagttaatgatgggaattttatacgatgg |
19355602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 370 - 681
Target Start/End: Original strand, 19355714 - 19356022
Alignment:
| Q |
370 |
tgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaaggtgggaacaccaa |
469 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
19355714 |
tgttatggatataatagcgatggagggtgccaaaaatgggaggaaataccaaattgtagggaacctggtgaggtttttcggaaaaaggtgggaagaccaa |
19355813 |
T |
|
| Q |
470 |
gcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgt |
569 |
Q |
| |
|
||| ||||||||| || | |||| | |||| | ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
19355814 |
ataaa---gacaatgcaacaactactgaaggtgatgtgaattatggttatagtgattgcaagatgagatgttggagaaattgtaattgctatggattcca |
19355910 |
T |
|
| Q |
570 |
agaattatatgataatttgactggatgtgtattctattcatggaattcgacacaagatgttgatttagacagtcagggtaactttaacgtcttggtaatg |
669 |
Q |
| |
|
||||||||| |||||| ||||||||| ||| ||||||||||||||| |||||||| |||||||| |||| || ||||||| ||| |||||||| | |
|
|
| T |
19355911 |
agaattatacattaattttactggatgtatatactattcatggaattcaacacaagacgttgatttggacaaaaagaataacttttacgccttggtaaag |
19356010 |
T |
|
| Q |
670 |
ccaacaaaatca |
681 |
Q |
| |
|
|||||||||||| |
|
|
| T |
19356011 |
ccaacaaaatca |
19356022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 352 - 667
Target Start/End: Original strand, 19376801 - 19377113
Alignment:
| Q |
352 |
attggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcaga |
451 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| | |
|
|
| T |
19376801 |
attggaaatgcagatatatgttatggatataatagtgatcgagggtgccaaaaatgggaggatataccagcttgcagggaacctggtgaggtgtttcaaa |
19376900 |
T |
|
| Q |
452 |
aaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattg |
551 |
Q |
| |
|
|||| |||| ||||| || | |||||||||||| | |||| | |||| | ||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19376901 |
gaaagactggaagaccaaacata---gacaatgcatcaaccattgaacaggatgtgacttatgtttacagtgattgcaagataagatgttggagaaattg |
19376997 |
T |
|
| Q |
552 |
tagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcatggaattcgacacaagatgttgatttagacagtcagggtaac |
651 |
Q |
| |
|
|| ||||||||||||| |||||| ||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||| |||| |
|
|
| T |
19376998 |
taattgcaatggattccaagaattttatcgcaatgggactggatgtatattctattcatggaattcgacacaagatcttgatttggtgagtcaggataac |
19377097 |
T |
|
| Q |
652 |
tttaacgtcttggtaa |
667 |
Q |
| |
|
||| ||| |||||||| |
|
|
| T |
19377098 |
ttttacgccttggtaa |
19377113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 346 - 635
Target Start/End: Original strand, 19404923 - 19405209
Alignment:
| Q |
346 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
445 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19404923 |
ggagatattggaaatgcagatatgtgttatggatataatagggacggagggtgccaaaagtgggaggatataccaacttgtagggaacctggtgaggtgt |
19405022 |
T |
|
| Q |
446 |
ttcagaaaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggag |
545 |
Q |
| |
|
|||||| ||| ||||| ||||| || || |||||||||| | |||| | |||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19405023 |
ttcagaggaagacgggaagaccaaacatcat---caatgcatcaactactgaaggtgatgtgaattatggttacagtgattgcaagatgagatgttggag |
19405119 |
T |
|
| Q |
546 |
aaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcatggaattcgacacaagatgttgattt |
635 |
Q |
| |
|
|||||||| |||| ||||||||| |||| |||| |||||| ||||||||| ||| |||||||||||||||||||||||| || ||||| |
|
|
| T |
19405120 |
aaattgtaattgctatggattcgaagaactatacagtaattttactggatgtatatactattcatggaattcgacacaagacgtggattt |
19405209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 357 - 681
Target Start/End: Original strand, 19337681 - 19337996
Alignment:
| Q |
357 |
aaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaag |
456 |
Q |
| |
|
||||||||| || |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
19337681 |
aaatgcagacatgtgttatggatataatagcgatggagggtgccaaaaatgggaggaaataccaaattgtagggaacctggtgaggtttttcggaaaatg |
19337780 |
T |
|
| Q |
457 |
gtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggagaaattgtagtt |
556 |
Q |
| |
|
||||||| ||||| ||| ||||||||| || || ||||| || | |||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
19337781 |
gtgggaagaccaaataaa---gacaatgcaacaacagatgaacc---tgcta---atggttacgatgattgcaagatgagatgttggagaaattgtaatt |
19337871 |
T |
|
| Q |
557 |
gcaatggattcgtagaattatatgataatttgactggatgtgtattctattcatggaattcgacacaagatgttgatttagacagtcagggtaactttaa |
656 |
Q |
| |
|
|| ||||||||| ||||||||| |||||| ||||||||| ||| |||||||||||||||||||||||| |||||||| |||| || ||||||| | |
|
|
| T |
19337872 |
gctatggattcgaagaattatacagtaattttactggatgtatatactattcatggaattcgacacaagacgttgatttggacaaaaagaataactttta |
19337971 |
T |
|
| Q |
657 |
cgtcttggtaatgccaacaaaatca |
681 |
Q |
| |
|
|| |||||||| ||||||||||||| |
|
|
| T |
19337972 |
cgccttggtaaagccaacaaaatca |
19337996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 15 - 281
Target Start/End: Original strand, 19376468 - 19376733
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaag |
114 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||| || ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
19376468 |
gttaatcgaaaaacaggatataattggtcattggtgtcctggttgactccttcgcggacaacttcaggtgaatttagtcttgagtgggaaccaaaacaag |
19376567 |
T |
|
| Q |
115 |
gtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacata |
214 |
Q |
| |
|
||||| ||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||| ||||||||| ||| |
|
|
| T |
19376568 |
gtgaactgaacat-caagaaaagcggcaaagtgtattggaaaagcggaaaacttaaaagcaatggattattcgagaatattccggccaatgttcaaaata |
19376666 |
T |
|
| Q |
215 |
tgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagatgggaa |
281 |
Q |
| |
|
|||||| |||||| ||||| ||||||||| |||||||||| || ||||||| |||||||| |||| |
|
|
| T |
19376667 |
tgtatcggtacatcattgtctctaacaaggatgaagattcctttagttttgaaattaaagatcggaa |
19376733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 346 - 632
Target Start/End: Complemental strand, 19555454 - 19555171
Alignment:
| Q |
346 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
445 |
Q |
| |
|
||||| |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
19555454 |
ggagatattgtaaatgcagatatgtgttatggatataatagtgatggaggatgccaaaaatgggaggatataccaacttgtagggcacctggtgaggggt |
19555355 |
T |
|
| Q |
446 |
ttcagaaaaaggtgggaacaccaagcaaaatggacaatgcatcatcatatgaatggaatgtaatttatggttacagtgattgcaagatgagatgttggag |
545 |
Q |
| |
|
|||||||||||| ||||| |||| || || |||||| || || | ||||||| |||| | |||| ||||||||||||||||||||| |||||||| |
|
|
| T |
19555354 |
ttcagaaaaaggcgggaagacca---aacatagacaattcaacaacgtatgaattcgatgtgacttatagttacagtgattgcaagatgaaatgttggaa |
19555258 |
T |
|
| Q |
546 |
aaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcatggaattcgacacaagatgttga |
632 |
Q |
| |
|
|||||||||||||||||||||| | || ||| |||| ||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
19555257 |
aaattgtagttgcaatggattccaactatattatagtaatatgactggatgtgtattcctttcatggaattcgacacaatatgttga |
19555171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 7 - 263
Target Start/End: Original strand, 19404591 - 19404846
Alignment:
| Q |
7 |
agttgggagttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaacc |
106 |
Q |
| |
|
|||| ||||||||||||| ||||| |||||||||||||||||| |||||||| ||||||| || | || ||||||| ||||||||||||| |||||||| |
|
|
| T |
19404591 |
agttaggagttaatcgaaaaacagcacataattggtcattggtgtcatggttaactccttcgcggccaaattcaggtaaatttagtcttgagtgggaacc |
19404690 |
T |
|
| Q |
107 |
aaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgt |
206 |
Q |
| |
|
||||||||||||| ||||||| ||| ||| | |||||||||||||||||||| ||||||||||||||| ||||| | |||||||| ||||| ||||| |
|
|
| T |
19404691 |
aaaacaaggtgaactgaacat-caagaaaagaggcaaagtgtattggaaaagcggaaaacttaaaagcgatggattattcgagaatattccggccaatgt |
19404789 |
T |
|
| Q |
207 |
tcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttt |
263 |
Q |
| |
|
|||| ||||||||| |||| |||||| ||||||||| |||||||||||||| |||| |
|
|
| T |
19404790 |
tcaaactatgtatcaatacactattgtctctaacaaggatgaagattctttcacttt |
19404846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 19173081 - 19172821
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaag |
114 |
Q |
| |
|
||||| |||| ||| ||||||||||||||||||||||| |||||| |||||| ||||| | |||||||| ||||||| ||||||||||||||| ||| |
|
|
| T |
19173081 |
gttaaccgaaaaaccggacataattggtcattggtttcgtggttggctccttcgctaccgaattcaggtggatttagtgttgaatgggaaccaatggaag |
19172982 |
T |
|
| Q |
115 |
gtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacata |
214 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||||| | ||| ||||||||| | |||| ||||||||| |
|
|
| T |
19172981 |
gtgaattgaacatc-aagcaacgcggcaaagtgtattggaaaagcggaaaacttaacagcaatggattattcaagaacattctagtgaaagttcaacatg |
19172883 |
T |
|
| Q |
215 |
tgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagat |
276 |
Q |
| |
|
||||||| ||||||||||| ||||||||| ||||||| || ||| |||| ||| | |||||| |
|
|
| T |
19172882 |
tgtatcaatacattattgtctctaacaaggatgaagactccttcactttcgaaatcaaagat |
19172821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 19287565 - 19287825
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaag |
114 |
Q |
| |
|
||||| |||| ||| |||||||||||||| ||||||||||||||| ||| || ||||| || |||||||| ||||||||||||||||||||| ||| ||| |
|
|
| T |
19287565 |
gttaaccgaaaaaccggacataattggtcgttggtttcatggttggctcattcgctaccaaattcaggtggatttagtcttgaatgggaacctaaagaag |
19287664 |
T |
|
| Q |
115 |
gtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacata |
214 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||||||||| ||||||| || | ||||||| | ||||||||||||||| |||| ||||||| | |
|
|
| T |
19287665 |
gtgaattgaacat-caagcaacgcggcaaagtgtattggaaaagcggaaaacgtagacgcaatggtttattcgagaacattccagtgaaagttcaacgtg |
19287763 |
T |
|
| Q |
215 |
tgtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagat |
276 |
Q |
| |
|
||||||| ||||||||||| ||||||||| ||||||| || ||| |||| ||| | |||||| |
|
|
| T |
19287764 |
tgtatcaatacattattgtctctaacaaggatgaagactccttcactttcgaaatcaaagat |
19287825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 77 - 263
Target Start/End: Complemental strand, 19468795 - 19468610
Alignment:
| Q |
77 |
ttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaa |
176 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19468795 |
ttcaggtgaatttaatctagattgggaaccaaaacaaggtgaattgatcatcaagaaaa-gcggcaaagtgtattggaaaagcggaaaacttaaaagcaa |
19468697 |
T |
|
| Q |
177 |
tggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttt |
263 |
Q |
| |
|
|||| | |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||| |
|
|
| T |
19468696 |
tggattattcgagaatattccggtgaatgttcaacatatgtatcagtacattattgtctctaacaaagacgaagattctttcacttt |
19468610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 77 - 263
Target Start/End: Complemental strand, 19555716 - 19555531
Alignment:
| Q |
77 |
ttcaggtgaatttagtcttgaatgggaaccaaaacaaggtgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaa |
176 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19555716 |
ttcaggtgaatttaatctagattgggaaccaaaacaaggtgaattgatcatcaagaaaa-gcggcaaagtgtattggaaaagcggaaaacttaaaagcaa |
19555618 |
T |
|
| Q |
177 |
tggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttctaacaagaatgaagattctttcgcttt |
263 |
Q |
| |
|
|||| | |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| |||| |
|
|
| T |
19555617 |
tggattattcgagaatattccggtgaatgttcaacatatgtatcagtacattattgtctctaacaaagacgaagattctttcacttt |
19555531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 510 - 632
Target Start/End: Original strand, 19390951 - 19391073
Alignment:
| Q |
510 |
ttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattca |
609 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||| |
|
|
| T |
19390951 |
ttatagttacagtgattgcaagatgagatgttggaaaaattgtagttgcaatggattccaagaattgtatgataatgggactggatgtatattctattca |
19391050 |
T |
|
| Q |
610 |
tggaattcgacacaagatgttga |
632 |
Q |
| |
|
||||||||||| ||| ||||||| |
|
|
| T |
19391051 |
tggaattcgacgcaatatgttga |
19391073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 346 - 469
Target Start/End: Complemental strand, 19468533 - 19468410
Alignment:
| Q |
346 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggttt |
445 |
Q |
| |
|
||||| |||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
19468533 |
ggagatattgtaaatgcagatatgtgttatggatataatagtgatggaggatgccaaaaatgggaggatataccaacttgtagggcacctggtgaggggt |
19468434 |
T |
|
| Q |
446 |
ttcagaaaaaggtgggaacaccaa |
469 |
Q |
| |
|
|||||||||||| ||||| ||||| |
|
|
| T |
19468433 |
ttcagaaaaaggcgggaagaccaa |
19468410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 19370934 - 19371046
Alignment:
| Q |
139 |
ggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttcta |
238 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||| |||||| |||||| |||||| ||||| ||||| |||| |
|
|
| T |
19370934 |
ggcaaagtgcattggaaaagtggaaaacttagaagcaatggattattcgagaacattccagagaatgtccaacatgtgtatcgatacatgattgtctcta |
19371033 |
T |
|
| Q |
239 |
acaagaatgaaga |
251 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
19371034 |
acaaagatgaaga |
19371046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 443
Target Start/End: Complemental strand, 19172742 - 19172660
Alignment:
| Q |
361 |
gcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggt |
443 |
Q |
| |
|
|||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
19172742 |
gcagatatgtgttatggctataataccgatggagggtgccaaaaatgggaggatataccaacctgcagggaacccggtgaggt |
19172660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 19287901 - 19287999
Alignment:
| Q |
358 |
aatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgaggtttttcagaaaaag |
456 |
Q |
| |
|
|||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||| |||||| |
|
|
| T |
19287901 |
aatgcagataagtgttatggatataataatgatgaagggtgccaaaaatgggaggatatgccaacttgcagggaacgtggtgaggtctttcaaaaaaag |
19287999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 510 - 635
Target Start/End: Complemental strand, 19172599 - 19172474
Alignment:
| Q |
510 |
ttatggttacagtgattgcaagatgagatgttggagaaattgtagttgcaatggattcgtagaattatatgataatttgactggatgtgtattctattca |
609 |
Q |
| |
|
|||||||||||||||||| ||||| || ||||||||||| ||| |||||||| ||| |||||| ||| |||| |||||||||| |||| |||||| |
|
|
| T |
19172599 |
ttatggttacagtgattgtaagatcagttgttggagaaactgtgaatgcaatgggttccaagaattttatcgtaatgggactggatgtatattttattca |
19172500 |
T |
|
| Q |
610 |
tggaattcgacacaagatgttgattt |
635 |
Q |
| |
|
| |||||||||||||||||||||||| |
|
|
| T |
19172499 |
tcgaattcgacacaagatgttgattt |
19172474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 19341154 - 19341266
Alignment:
| Q |
139 |
ggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatatgtatcagtacattattgtttcta |
238 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||| | |||||| |||||| |||||| ||||| ||||| |||| |
|
|
| T |
19341154 |
ggcaaagtgcattggaaaagtggaaaacttggaagcaatggattattcgagaacattctagagaatgtccaacatgtgtatcgatacatgattgtctcta |
19341253 |
T |
|
| Q |
239 |
acaagaatgaaga |
251 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
19341254 |
acaaagatgaaga |
19341266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 19448365 - 19448422
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctac |
72 |
Q |
| |
|
||||||| || |||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
19448365 |
gttaatcaaaaaacaggacataattggtcattggtgtcatggttgactccttcgctac |
19448422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 19532711 - 19532654
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctac |
72 |
Q |
| |
|
||||||| || |||||||||||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
19532711 |
gttaatcaaaaaacaggacataattggtcattggtgtcatggttgactccttcgctac |
19532654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 683
Target Start/End: Original strand, 19450666 - 19450793
Alignment:
| Q |
556 |
tgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcatggaattcgacacaagatgttgatttagacagtcagggtaacttta |
655 |
Q |
| |
|
|||||||||||| |||||||| | |||| |||||||||| ||||||||||||||||||||||| |||| || ||||| || | ||| ||| ||| |
|
|
| T |
19450666 |
tgcaatggattccaagaattatttagtaatgggactggatgtatattctattcatggaattcgacaaaagaagtggatttggagaatcaatataattttt |
19450765 |
T |
|
| Q |
656 |
acgtcttggtaatgccaacaaaatcagc |
683 |
Q |
| |
|
||| |||||||| |||||||||| |||| |
|
|
| T |
19450766 |
acgccttggtaaagccaacaaaaacagc |
19450793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 683
Target Start/End: Complemental strand, 19530410 - 19530283
Alignment:
| Q |
556 |
tgcaatggattcgtagaattatatgataatttgactggatgtgtattctattcatggaattcgacacaagatgttgatttagacagtcagggtaacttta |
655 |
Q |
| |
|
|||||||||||| |||||||| | |||| |||||||||| ||||||||||||||||||||||| |||| || ||||| || | ||| ||| ||| |
|
|
| T |
19530410 |
tgcaatggattccaagaattatttagtaatgggactggatgtatattctattcatggaattcgacaaaagaagtggatttggagaatcaatataattttt |
19530311 |
T |
|
| Q |
656 |
acgtcttggtaatgccaacaaaatcagc |
683 |
Q |
| |
|
||| |||||||| |||||||||| |||| |
|
|
| T |
19530310 |
acgccttggtaaagccaacaaaaacagc |
19530283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 19410658 - 19410696
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttca |
53 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19410658 |
gttaatcgaaaaacaggacataattggtcattggtttca |
19410696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 19457677 - 19457715
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttca |
53 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19457677 |
gttaatcgaaaaacaggacataattggtcattggtttca |
19457715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 19469774 - 19469728
Alignment:
| Q |
7 |
agttgggagttaatcgaagaacaggacataattggtcattggtttca |
53 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
19469774 |
agttgggagttaatcgaaaaactggacataaatggtcattggtttca |
19469728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 19523401 - 19523363
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttca |
53 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19523401 |
gttaatcgaaaaacaggacataattggtcattggtttca |
19523363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 19540698 - 19540652
Alignment:
| Q |
7 |
agttgggagttaatcgaagaacaggacataattggtcattggtttca |
53 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
19540698 |
agttgggagttaatcgaaaaactggacataaatggtcattggtttca |
19540652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 19592000 - 19592046
Alignment:
| Q |
7 |
agttgggagttaatcgaagaacaggacataattggtcattggtttca |
53 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| ||||||||||||||| |
|
|
| T |
19592000 |
agttgggagttaatcgaaaaactggacataaatggtcattggtttca |
19592046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 19371145 - 19371192
Alignment:
| Q |
380 |
ataatagcaatggagggtgccaaaaatgggaggatataccaacttgta |
427 |
Q |
| |
|
||||||| ||||| || ||||||||||||||| ||||||||||||||| |
|
|
| T |
19371145 |
ataatagtaatggtggatgccaaaaatgggagtatataccaacttgta |
19371192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 19468830 - 19468792
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttca |
53 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
19468830 |
gttaatcggaaaacaggacataattggtcattggtttca |
19468792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 19555751 - 19555713
Alignment:
| Q |
15 |
gttaatcgaagaacaggacataattggtcattggtttca |
53 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
19555751 |
gttaatcggaaaacaggacataattggtcattggtttca |
19555713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 16 - 276
Target Start/End: Original strand, 19542918 - 19543177
Alignment:
| Q |
16 |
ttaatcgaagaacaggacataattggtcattggtttcatggttgactcctttgctacaaacttcaggtgaatttagtcttgaatgggaaccaaaacaagg |
115 |
Q |
| |
|
|||| |||| ||| |||||||||||||| || ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
19542918 |
ttaaccgaataaccggacataattggtctttagtttcatggatgactccttcgctatcaacttcaggtgaatttagtcttgaatgggaaccaaagcaacg |
19543017 |
T |
|
| Q |
116 |
tgaattgaacatccaaaaaacgcggcaaagtgtattggaaaagtggaaaacttaaaagcaatggaatgttcgagaacattccaatgaatgttcaacatat |
215 |
Q |
| |
|
||||||| | || ||| ||| |||||||||||||||||||||| |||||||||| ||| ||||| | |||| |||||| || ||||||||||| | | |
|
|
| T |
19543018 |
tgaattggaaat-caagaaaagcggcaaagtgtattggaaaagcggaaaacttagaagaaatgggttattcgtgaacataccggcgaatgttcaacgtgt |
19543116 |
T |
|
| Q |
216 |
gtatcagtacattattgtttctaacaagaatgaagattctttcgcttttgaagttaaagat |
276 |
Q |
| |
|
|||| | ||||||||||||||||| || |||||||||| || ||||| || |||||||| |
|
|
| T |
19543117 |
gtatgaatacattattgtttctaagaaagatgaagattcctttacttttaaaattaaagat |
19543177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 19543241 - 19543337
Alignment:
| Q |
346 |
ggagaaattggaaatgcagatatatgttatggatataatagcaatggagggtgccaaaaatgggaggatataccaacttgtagggaacctggtgagg |
442 |
Q |
| |
|
||||| |||||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19543241 |
ggagatattggaaatgcagacttgtgttatggatataatatcaacggagggtgccaaaaatgggaggatataccaagttgtagggaacctggtgagg |
19543337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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