View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0552_high_34 (Length: 306)

Name: NF0552_high_34
Description: NF0552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0552_high_34
NF0552_high_34
[»] chr7 (33 HSPs)
chr7 (1-291)||(21402803-21403099)
chr7 (207-287)||(40518868-40518948)
chr7 (207-287)||(41465845-41465925)
chr7 (207-286)||(15716665-15716744)
chr7 (217-286)||(9497987-9498056)
chr7 (207-291)||(42433067-42433151)
chr7 (218-281)||(14204294-14204357)
chr7 (217-287)||(9497699-9497769)
chr7 (212-286)||(9712178-9712252)
chr7 (207-281)||(30004534-30004608)
chr7 (217-282)||(10646186-10646251)
chr7 (218-286)||(12615773-12615841)
chr7 (207-287)||(21066897-21066977)
chr7 (209-277)||(45640081-45640149)
chr7 (207-286)||(9877247-9877326)
chr7 (207-286)||(10244869-10244948)
chr7 (207-286)||(16200570-16200649)
chr7 (207-286)||(23102538-23102617)
chr7 (218-285)||(25672379-25672446)
chr7 (207-286)||(35835679-35835758)
chr7 (243-286)||(47463978-47464021)
chr7 (212-286)||(3529796-3529870)
chr7 (212-286)||(7401367-7401441)
chr7 (212-286)||(10226691-10226765)
chr7 (248-286)||(28800138-28800176)
chr7 (207-281)||(47641056-47641130)
chr7 (218-287)||(2846039-2846108)
chr7 (243-300)||(46758289-46758346)
chr7 (207-287)||(13730076-13730156)
chr7 (219-287)||(27424862-27424930)
chr7 (212-268)||(28735744-28735800)
chr7 (222-258)||(32250377-32250413)
chr7 (243-287)||(41331058-41331102)
[»] chr4 (38 HSPs)
chr4 (212-286)||(42134437-42134511)
chr4 (207-286)||(42395238-42395317)
chr4 (207-291)||(54534837-54534921)
chr4 (223-286)||(52757258-52757321)
chr4 (225-291)||(8089226-8089292)
chr4 (212-281)||(31852598-31852667)
chr4 (243-287)||(32760689-32760733)
chr4 (210-286)||(53921487-53921563)
chr4 (218-285)||(542795-542862)
chr4 (212-287)||(38228453-38228528)
chr4 (207-286)||(40051633-40051712)
chr4 (207-286)||(42381093-42381172)
chr4 (212-286)||(13578445-13578519)
chr4 (207-281)||(42218761-42218835)
chr4 (209-286)||(37868547-37868624)
chr4 (212-283)||(8848194-8848266)
chr4 (207-258)||(481553-481604)
chr4 (207-286)||(626962-627041)
chr4 (207-286)||(21935488-21935567)
chr4 (233-300)||(23142719-23142786)
chr4 (212-291)||(24455057-24455135)
chr4 (207-286)||(27103081-27103160)
chr4 (207-286)||(30057233-30057312)
chr4 (207-286)||(35465446-35465525)
chr4 (207-286)||(40994083-40994162)
chr4 (207-286)||(51777855-51777934)
chr4 (205-286)||(2688104-2688186)
chr4 (221-291)||(7043909-7043979)
chr4 (207-281)||(25235782-25235856)
chr4 (217-286)||(15208543-15208612)
chr4 (217-286)||(23778805-23778874)
chr4 (212-257)||(25526459-25526504)
chr4 (211-267)||(19963797-19963853)
chr4 (243-287)||(29406404-29406448)
chr4 (214-286)||(32955243-32955315)
chr4 (248-300)||(36099149-36099201)
chr4 (247-287)||(46791187-46791227)
chr4 (223-291)||(47929272-47929340)
[»] chr2 (33 HSPs)
chr2 (223-285)||(4659435-4659497)
chr2 (221-291)||(17777138-17777208)
chr2 (207-286)||(1844828-1844907)
chr2 (219-285)||(4878232-4878298)
chr2 (212-286)||(32609167-32609241)
chr2 (218-279)||(2950349-2950410)
chr2 (243-300)||(7717571-7717628)
chr2 (218-286)||(542006-542074)
chr2 (207-279)||(11050744-11050816)
chr2 (251-291)||(25515995-25516035)
chr2 (212-267)||(5062313-5062368)
chr2 (207-286)||(33228913-33228992)
chr2 (219-281)||(5612977-5613039)
chr2 (223-273)||(11160691-11160741)
chr2 (261-291)||(27463678-27463708)
chr2 (212-286)||(33222134-33222208)
chr2 (212-285)||(7379581-7379654)
chr2 (222-287)||(14835307-14835371)
chr2 (209-258)||(34434402-34434451)
chr2 (243-300)||(36748933-36748990)
chr2 (209-286)||(44186456-44186533)
chr2 (243-287)||(3596297-3596341)
chr2 (243-287)||(13242710-13242754)
chr2 (207-287)||(23919456-23919536)
chr2 (231-271)||(25406673-25406713)
chr2 (207-283)||(25932547-25932623)
chr2 (207-287)||(27497507-27497587)
chr2 (218-286)||(28194654-28194722)
chr2 (207-287)||(28195113-28195193)
chr2 (231-271)||(30811855-30811895)
chr2 (219-287)||(41246409-41246477)
chr2 (247-287)||(44558053-44558093)
chr2 (251-291)||(44898457-44898497)
[»] chr5 (30 HSPs)
chr5 (207-291)||(8241061-8241145)
chr5 (207-287)||(20145543-20145623)
chr5 (207-271)||(40361574-40361638)
chr5 (212-286)||(4153563-4153637)
chr5 (229-271)||(5891082-5891124)
chr5 (207-285)||(12891568-12891646)
chr5 (222-291)||(32623419-32623488)
chr5 (207-287)||(23292396-23292476)
chr5 (242-285)||(33018507-33018550)
chr5 (233-287)||(11348768-11348822)
chr5 (212-286)||(42718802-42718875)
chr5 (247-300)||(4418308-4418361)
chr5 (217-286)||(6558822-6558891)
chr5 (218-286)||(15241418-15241486)
chr5 (218-286)||(35112942-35113010)
chr5 (218-286)||(41756469-41756537)
chr5 (207-259)||(42885840-42885892)
chr5 (217-256)||(18597430-18597469)
chr5 (223-286)||(32226225-32226288)
chr5 (207-286)||(39886192-39886271)
chr5 (207-286)||(42916400-42916479)
chr5 (212-286)||(16280262-16280336)
chr5 (212-286)||(18026808-18026882)
chr5 (217-286)||(3166002-3166071)
chr5 (243-300)||(3741001-3741058)
chr5 (250-287)||(24477879-24477916)
chr5 (233-286)||(33999097-33999150)
chr5 (207-287)||(3198338-3198418)
chr5 (247-287)||(20430616-20430656)
chr5 (207-283)||(42842859-42842935)
[»] chr3 (32 HSPs)
chr3 (212-291)||(29559649-29559728)
chr3 (212-287)||(29098708-29098783)
chr3 (212-286)||(50675722-50675796)
chr3 (207-286)||(25279039-25279118)
chr3 (207-286)||(51155072-51155151)
chr3 (207-281)||(3748587-3748661)
chr3 (207-286)||(7269966-7270045)
chr3 (207-286)||(10482833-10482912)
chr3 (207-286)||(17602656-17602735)
chr3 (207-286)||(19996432-19996511)
chr3 (243-286)||(26880224-26880267)
chr3 (207-286)||(32144595-32144674)
chr3 (207-286)||(39719946-39720025)
chr3 (207-286)||(41936387-41936466)
chr3 (248-287)||(53055981-53056020)
chr3 (207-278)||(53163605-53163676)
chr3 (212-286)||(11206006-11206080)
chr3 (207-281)||(30779552-30779626)
chr3 (212-286)||(34102591-34102665)
chr3 (207-281)||(39966059-39966133)
chr3 (212-286)||(53432717-53432791)
chr3 (243-300)||(25883954-25884011)
chr3 (212-269)||(34847559-34847616)
chr3 (218-291)||(49750381-49750454)
chr3 (215-286)||(7251849-7251920)
chr3 (248-300)||(27329898-27329950)
chr3 (207-287)||(44685147-44685227)
chr3 (207-267)||(45871028-45871088)
chr3 (207-287)||(49983687-49983767)
chr3 (209-269)||(51772902-51772962)
chr3 (248-300)||(51879147-51879199)
chr3 (207-279)||(52046372-52046444)
[»] chr1 (30 HSPs)
chr1 (212-286)||(28564325-28564399)
chr1 (207-287)||(43021601-43021681)
chr1 (207-286)||(42490390-42490469)
chr1 (207-282)||(50536975-50537050)
chr1 (212-286)||(15165871-15165945)
chr1 (212-286)||(44732649-44732723)
chr1 (217-286)||(12048104-12048173)
chr1 (230-287)||(28317234-28317291)
chr1 (212-281)||(51942311-51942379)
chr1 (218-287)||(52426892-52426961)
chr1 (207-287)||(23933047-23933127)
chr1 (243-283)||(48368509-48368549)
chr1 (233-300)||(5431005-5431072)
chr1 (207-286)||(6130013-6130092)
chr1 (248-287)||(7000941-7000980)
chr1 (236-287)||(11860082-11860133)
chr1 (248-287)||(19564132-19564171)
chr1 (207-286)||(21265667-21265746)
chr1 (207-286)||(30360423-30360502)
chr1 (207-286)||(47930651-47930730)
chr1 (217-291)||(1604199-1604273)
chr1 (207-281)||(7166212-7166286)
chr1 (207-281)||(33207216-33207290)
chr1 (234-291)||(9779682-9779739)
chr1 (207-286)||(3767953-3768033)
chr1 (218-286)||(7191054-7191122)
chr1 (248-300)||(18512541-18512593)
chr1 (207-287)||(24874982-24875062)
chr1 (222-286)||(34656375-34656439)
chr1 (243-287)||(39670808-39670852)
[»] scaffold0154 (1 HSPs)
scaffold0154 (215-286)||(1706-1777)
[»] scaffold0031 (2 HSPs)
scaffold0031 (218-286)||(93962-94032)
scaffold0031 (218-281)||(49986-50049)
[»] chr8 (37 HSPs)
chr8 (207-286)||(8698560-8698639)
chr8 (207-279)||(40362059-40362131)
chr8 (207-286)||(34266023-34266102)
chr8 (212-287)||(44444560-44444635)
chr8 (212-286)||(24480801-24480875)
chr8 (219-285)||(31712572-31712638)
chr8 (218-287)||(36433557-36433627)
chr8 (212-286)||(41458311-41458385)
chr8 (207-281)||(43656047-43656121)
chr8 (212-281)||(7388471-7388540)
chr8 (243-300)||(34873133-34873190)
chr8 (243-300)||(36035145-36035202)
chr8 (251-291)||(7678994-7679034)
chr8 (243-291)||(40904578-40904626)
chr8 (227-279)||(42801636-42801688)
chr8 (207-287)||(44088935-44089014)
chr8 (212-287)||(3949060-3949135)
chr8 (207-286)||(10587257-10587336)
chr8 (207-258)||(24296876-24296927)
chr8 (207-286)||(27077077-27077156)
chr8 (207-286)||(34894380-34894459)
chr8 (212-291)||(35880856-35880934)
chr8 (207-281)||(10573112-10573186)
chr8 (207-281)||(16449136-16449210)
chr8 (250-287)||(2114937-2114974)
chr8 (245-286)||(2626045-2626086)
chr8 (212-285)||(10083179-10083252)
chr8 (247-300)||(31024345-31024398)
chr8 (207-291)||(5328542-5328626)
chr8 (217-285)||(5683775-5683843)
chr8 (218-258)||(11850668-11850708)
chr8 (248-300)||(13059143-13059195)
chr8 (248-300)||(13105143-13105195)
chr8 (215-291)||(13290687-13290763)
chr8 (207-287)||(22274590-22274670)
chr8 (207-287)||(25890383-25890463)
chr8 (207-283)||(39362276-39362352)
[»] chr6 (32 HSPs)
chr6 (207-286)||(978114-978193)
chr6 (218-286)||(34040695-34040762)
chr6 (212-283)||(5694930-5695001)
chr6 (207-286)||(22997347-22997426)
chr6 (207-286)||(23790975-23791054)
chr6 (207-281)||(30885555-30885629)
chr6 (212-281)||(19892261-19892330)
chr6 (210-286)||(5944440-5944516)
chr6 (207-287)||(19374819-19374899)
chr6 (217-286)||(19618706-19618777)
chr6 (218-286)||(30527784-30527852)
chr6 (243-287)||(32788833-32788877)
chr6 (207-286)||(2251849-2251928)
chr6 (207-286)||(2500494-2500573)
chr6 (207-286)||(3294775-3294854)
chr6 (207-286)||(7177306-7177385)
chr6 (207-281)||(2426075-2426149)
chr6 (207-281)||(3640525-3640599)
chr6 (207-281)||(3795759-3795833)
chr6 (207-281)||(9435637-9435711)
chr6 (221-283)||(16913883-16913945)
chr6 (207-285)||(16966375-16966453)
chr6 (212-286)||(30704976-30705050)
chr6 (217-286)||(33646855-33646925)
chr6 (217-286)||(216227-216296)
chr6 (230-291)||(3709893-3709954)
chr6 (243-300)||(18904312-18904369)
chr6 (222-271)||(27102645-27102694)
chr6 (222-271)||(27144467-27144516)
chr6 (218-259)||(32837364-32837405)
chr6 (217-285)||(10628635-10628703)
chr6 (243-287)||(31952316-31952360)
[»] scaffold0117 (1 HSPs)
scaffold0117 (218-286)||(18459-18527)
[»] scaffold0088 (1 HSPs)
scaffold0088 (207-286)||(10806-10885)
[»] scaffold0460 (1 HSPs)
scaffold0460 (207-269)||(13200-13262)
[»] scaffold0025 (1 HSPs)
scaffold0025 (207-257)||(65796-65846)
[»] scaffold0009 (1 HSPs)
scaffold0009 (231-271)||(62745-62785)


Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 21403099 - 21402803
Alignment:
Q  1 tctagaaatggaagaattatgctaacaacacattgtacatcagactcttttgtacactatattgttagttgaaaattttatgcattttaattaatctatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  21403099 tctagaaatggaagaattatgctaacaacacattgtacatcagactcttttgtgcactatattgttagttgaaaattttatgcattttaattcatctatg 21403000  T
Q  101 tatggcatgaattatgtataatttcaatccataaaaggatatgttttga-aaaagtgcattgttaacacacctcatagttcattgaacgaaaacaataat 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21402999 tatggcatgaattatgtataatttcaatccataaaaggatatgttttgaaaaaagtgcattgttaacacacctcatagttcatagaacgaaaacaataat 21402900  T
Q  200 tc-----tcctgagcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    ||       || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||| ||||    
T  21402899 tcctgtgagcttagcttagttagtagggatattgtatattatatataagggttggggtttgaacttcggagacctcacttctccacatttaaaatgt 21402803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 40518948 - 40518868
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| ||||||| |||| ||| ||||| || |||||||| |||||||| ||||||||||| |||||||||||||||    
T  40518948 agctcagttggtagggacattgcataatatatgtaggggttgggattcgaactccggacaccccacttctccacatttaat 40518868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 41465845 - 41465925
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||||||||||| |||||||||  | ||||  ||||||||||| ||||||||||| |||||||||||||||    
T  41465845 agctcagttggtagggatattgcatattatatgcaggggtcagggttcgaactccggacaccccacttctccacatttaat 41465925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 15716744 - 15716665
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| ||||||||||||  ||||||||  |||||| |||||||||||||||||||||||| || | |||||||||    
T  15716744 agctcagttggtagggatattgcgtattatatgcaagggtcggggttcgaacttcggacaccccacttattcacatttaa 15716665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 9497987 - 9498056
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||| ||||||||| || |||| |||||||||||  ||||||||||| ||||||||| ||||    
T  9497987 gtagggatattgcatattatatgtaggggtcggggttcgaaccccggacaccccacttctccacaattaa 9498056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 42433151 - 42433067
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    ||||||||| |||||||||||||||||||||| || ||  || ||||||||| || |||||  |||||||||| |||||| ||||    
T  42433151 agcttagttggtagggatattgtatattatatgtagggaatgtggttcgaacctcagacacttcatttctccatatttaaaatgt 42433067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 281
Target Start/End: Original strand, 14204294 - 14204357
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    ||||||||||| ||||||||| || ||| |||||||||||| |||||||| ||| |||||||||    
T  14204294 tagggatattgcatattatatgtaggggctggggttcgaacctcggacactccacttctccaca 14204357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 9497699 - 9497769
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||||||||||| ||| | |||||| ||||||||||||||| ||| ||||| | ||||||||| |||||||    
T  9497699 gtagggatattgcataatttatataggggttggggttcgaatttcagacactctatttctccatatttaat 9497769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 9712252 - 9712178
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||  | |||| |||||||||||  ||||||||||| ||||||||| ||||    
T  9712252 agttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggacaccccacttctccacaattaa 9712178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 30004608 - 30004534
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||  |||||||||||| |||| ||||||||||| |||| ||| ||| |||||||||    
T  30004608 agctcagttggtagggatattacatattatatataggggtcggggttcgaacctcggccactccacttctccaca 30004534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 282
Target Start/End: Original strand, 10646186 - 10646251
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacat 282  Q
    |||||||||||| ||||| |||  |||||| |||||| |||| |||||||||||| ||||||||||    
T  10646186 gtagggatattgcatattttatgcaagggtaggggtttgaacctcggacaccccacttctccacat 10646251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 12615773 - 12615841
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||| |||||||||  | |||||||| |||||||| ||||||||||  ||||||||| ||||    
T  12615773 tagggatattgcatattatatgcaggggttgggattcgaactccggacaccccgcttctccacaattaa 12615841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 21066897 - 21066977
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||||||||||| ||||||||| || |||  |||||||||||  |||||| | || |||||||||||||||    
T  21066897 agctcagttggtagggatattgcatattatatgtaggggccggggttcgaaccccggacatctcacttctccacatttaat 21066977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 45640149 - 45640081
Alignment:
Q  209 cttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctc 277  Q
    ||||||||||||||||||||||||||||||  | |   ||||||||||||| ||||||| ||| |||||    
T  45640149 cttagttagtagggatattgtatattatatgcaggaactggggttcgaactccggacactccacttctc 45640081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 9877326 - 9877247
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  9877326 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 9877247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 10244948 - 10244869
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||||||| || | |  |||||||||||  ||||||||||| ||||||||| ||||    
T  10244948 agctcagttggtagggatattgcatattatatgtaggagccggggttcgaaccccggacaccccacttctccacaattaa 10244869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 16200570 - 16200649
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||| || ||||| |||||| |||||||||  | |||| |||||||||||  | ||||||||||||||||||| ||||    
T  16200570 agcttaattggtaggaatattgcatattatatgcaggggtcggggttcgaaccccagacaccccatttctccacaattaa 16200649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 23102617 - 23102538
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  23102617 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 23102538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 25672446 - 25672379
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    ||||||||||| ||||||||||||| |||||| |||| ||| || ||||||| | |||| ||||||||    
T  25672446 tagggatattgcatattatatataaaggttggagttcaaacctcagacaccctacttcttcacattta 25672379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 35835758 - 35835679
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| ||||||||||||||| |||| ||||||  |||||  ||||||||||| || ||||| ||| ||||||||| ||||    
T  35835758 agctcagttagtagggatatcgtattttatatgcaagggccggggttcgaacctcagacactccacttctccacaattaa 35835679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 47463978 - 47464021
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||    
T  47463978 gggttggggttcgaacctcggacaccccacttctccacaattaa 47464021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 3529796 - 3529870
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| || ||||||| | ||  || ||||||||||||| |||| ||||||||||||| ||||    
T  3529796 agttggtagggatattgcattttatatacagggactgaggttcgaacttcgaacactccatttctccacaattaa 3529870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 7401441 - 7401367
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| ||||||||||||||||||||||  | |  |||||||| |||| |||||||| ||| ||||||||| ||||    
T  7401441 agttggtagggatattgtatattatatgcaggaattggggtttgaacctcggacactccacttctccacaattaa 7401367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 10226691 - 10226765
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||| ||| |||||||||  | ||| ||| |||||| |||||||||||||| ||||||||| ||||    
T  10226691 agttggtagggatgttgcatattatatgcaggggctggagttcgagcttcggacaccccacttctccacaattaa 10226765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 28800138 - 28800176
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  28800138 ggggttcgaacttctgacaccccacttctccacatttaa 28800176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 47641056 - 47641130
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| ||||||||| || ||| ||||||||||||  | ||||| ||| |||||||||    
T  47641056 agctcagttggtagggatattgcatattatatgtaggggctggggttcgaaccccagacactccacttctccaca 47641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 2846108 - 2846039
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||| || | |||| || ||||||||||||||||    ||||||||| |||||||||||||||    
T  2846108 tagggatattgcatgtaatatgtaggggttggggttcgaacccaagacaccccacttctccacatttaat 2846039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 46758289 - 46758346
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||| |||||||||||| ||||||||||| | |||||||||||| |||| || |||||    
T  46758289 gggtcggggttcgaactccggacaccccactcctccacatttaaaatgtgtgagctcc 46758346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 13730156 - 13730076
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||| |||| ||||||| |||||||||  | |||  |||||| ||||  ||||||| ||||||||||| |||||||    
T  13730156 agcttagttggtagagatattgcatattatatgcaggggccggggtttgaaccccggacactccatttctccatatttaat 13730076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 27424862 - 27424930
Alignment:
Q  219 agggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||||||||| |||||||||  | |||  ||||||||||| ||||| || ||| |||||||||||||||    
T  27424862 agggatattgcatattatatgcaggggccggggttcgaacctcggatactccacttctccacatttaat 27424930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 28735744 - 28735800
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacacc 268  Q
    |||| |||||||||||| ||||||||  |||||| ||||||||||||| || |||||    
T  28735744 agttggtagggatattgcatattataagtaagggctggggttcgaactccgaacacc 28735800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Complemental strand, 32250413 - 32250377
Alignment:
Q  222 gatattgtatattatatataagggttggggttcgaac 258  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  32250413 gatattgcatattatatataagggttgaggttcgaac 32250377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 41331102 - 41331058
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||||||||| | ||||||||||| |||||||||||||||    
T  41331102 gggtcggggttcgaattccggacaccccacttctccacatttaat 41331058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 42134511 - 42134437
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||||||||| |||||||||  |||||| |||||||||||| ||||||||||| ||||||||| ||||    
T  42134511 agttagtagggatattgcatattatatgcaagggtcggggttcgaactccggacaccccacttctccacaattaa 42134437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 42395238 - 42395317
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||| |||||||||||| ||||||||| || |||  |||||||||||| ||||||||||| ||||||||| ||||    
T  42395238 agcttagttggtagggatattgcatattatatgtaggggccggggttcgaactccggacaccccacttctccacaattaa 42395317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 54534837 - 54534921
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||| |||| |||||||||||| |||||||||  || | | |||||||||||  ||||||||||| |||||||||||||||||||    
T  54534837 agctcagttggtagggatattgcatattatatgcaaagttcggggttcgaaccacggacaccccacttctccacatttaatatgt 54534921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 52757321 - 52757258
Alignment:
Q  223 atattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||| |||||||||  | ||||||||||||||||||| ||||||||||||||||||| ||||    
T  52757321 atattgcatattatatgcaggggttggggttcgaacttcagacaccccatttctccacaattaa 52757258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 8089292 - 8089226
Alignment:
Q  225 attgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||| |||||||||  | |||| || ||||||||||||||||| |||||||||||||||||||||||    
T  8089292 attgcatattatatgcaggggtcggagttcgaacttcggacactccatttctccacatttaatatgt 8089226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 281
Target Start/End: Complemental strand, 31852667 - 31852598
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||||| ||||| ||||||||| || ||||||||||||||||  ||||||| |||||||||||||    
T  31852667 agttggtagggttattgcatattatatgtaggggttggggttcgaaccccggacactccatttctccaca 31852598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 32760689 - 32760733
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||    
T  32760689 gggttggggttcgaactccggacaccccatttctccacaattaat 32760733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 53921563 - 53921487
Alignment:
Q  210 ttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||| ||||| |||||| || ||||||||| |||| |||||| ||||  ||||||||||| ||||||||||||||    
T  53921563 ttagttggtaggaatattgcatgttatatataggggtcggggtttgaaccccggacaccccacttctccacatttaa 53921487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 542862 - 542795
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    ||||||||||| ||||| |||  | ||| ||||||||||||||||||||| ||| |||||||||||||    
T  542862 tagggatattgcatattgtatgcaggggctggggttcgaacttcggacactccacttctccacattta 542795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 38228453 - 38228528
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||||||||||| || |||||| || |||  |||||||||||| || ||||||||||||| ||||||||||    
T  38228453 agttggtagggatattgcatgttatatgtaggggccggggttcgaactccgaacaccccatttctacacatttaat 38228528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 40051633 - 40051712
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||||||| || |||| |||||||||||  | ||||||||| ||||||||| ||||    
T  40051633 agctcagttggtagggatattgcatattatatgtaggggtaggggttcgaaccccagacaccccacttctccacaattaa 40051712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 42381172 - 42381093
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| || |||||| || |||| ||||||||||| || ||||||||| ||||||||| ||||    
T  42381172 agctcagttggtagggatattgcatgttatatgtaggggtcggggttcgaacctcagacaccccacttctccacaattaa 42381093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 13578519 - 13578445
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||  | |||| |||||||||||  ||||||||||| ||||||||| ||||    
T  13578519 agttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggacaccccacttctccacaattaa 13578445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 42218761 - 42218835
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| ||||||||  || ||| ||||||||||||| ||||||| ||| |||||||||    
T  42218761 agctcagttggtagggatattgcatattatacgtaggggctggggttcgaactccggacactccacttctccaca 42218835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 286
Target Start/End: Complemental strand, 37868624 - 37868547
Alignment:
Q  209 cttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||| ||||||| |||||||||  | ||| ||| |||||||| ||||||||| || ||||||||| ||||    
T  37868624 cttagttagtagtgatattgcatattatatgcaggggctggagttcgaacctcggacacctcacttctccacaattaa 37868547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 8848266 - 8848194
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccat-ttctccacatt 283  Q
    |||| |||||||||||| |||||||||| | |||  |||||||||||  |||||||||||| |||||||||||    
T  8848266 agttggtagggatattgcatattatatacaggggccggggttcgaaccccggacaccccatattctccacatt 8848194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 481604 - 481553
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaac 258  Q
    ||||||||| |||| ||||||| ||||||||| || ||||||||||||||||    
T  481604 agcttagttggtagagatattgcatattatatgtaggggttggggttcgaac 481553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 627041 - 626962
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  ||| | ||||||||||||  ||||||| ||| ||||||||| ||||    
T  627041 agctcagttggtagggatattgcatattatatgcaagagctggggttcgaaccccggacactccacttctccacaattaa 626962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 21935488 - 21935567
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  21935488 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 21935567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 23142786 - 23142719
Alignment:
Q  233 ttatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||||| || ||| |||||||||||| ||||||  ||||||||||||||||||| |||| || |||||    
T  23142786 ttatatgtaggggctggggttcgaacctcggaccgcccatttctccacatttaaaatgtgtgagctcc 23142719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 24455057 - 24455135
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||| |||||||||||||||||||||| || |||||||||||| |||  ||| || ||| |||||||| |||||| ||||    
T  24455057 agttggtagggatattgtatattatatgtaggggttggggttcaaaccacgggca-cccgtttctccatatttaaaatgt 24455135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 27103160 - 27103081
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||| |||||||||||| ||||||||| ||  ||| || ||||||| | ||||||| ||| ||||||||| ||||    
T  27103160 agcttagttggtagggatattgcatattatatgtagaggtcggagttcgaattccggacactccacttctccacaattaa 27103081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 30057233 - 30057312
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||| ||||||| |||  ||||||||||| ||||||||| ||||    
T  30057233 agctcagttggtagggatattgcatattatatgcaggggtcggggttcaaaccccggacaccccacttctccacaattaa 30057312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 35465446 - 35465525
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| || ||||||| | ||||| ||||||||| ||  ||||||||| ||||||||| ||||    
T  35465446 agctcagttggtagggatattgcattttatatacaggggttagggttcgaattttagacaccccacttctccacaattaa 35465525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 40994162 - 40994083
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||||||| || | |||||||||||||   ||||||| ||| ||||||||| ||||    
T  40994162 agctcagttggtagggatattgcatattatatgtaggagttggggttcgaatcccggacactccacttctccacaattaa 40994083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 51777855 - 51777934
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||  |||||| |||||||||  | || | |||||||||||| |||||| |||| ||||||||||||||    
T  51777855 agctcagttagtagctatattgcatattatatgcagggatcggggttcgaactccggacatcccacttctccacatttaa 51777934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 2688104 - 2688186
Alignment:
Q  205 tgagcttag-ttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||| || |||||||||||| |||||||||  | | | || ||||||||   ||||||||||||||||||||||||||    
T  2688104 tgagcttagcttggtagggatattgcatattatatgcaggagctgtggttcgaatcccggacaccccatttctccacatttaa 2688186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 7043909 - 7043979
Alignment:
Q  221 ggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||||||| |||||| ||||| | ||||||||||||||| | ||| || || |||||||||||||| ||||    
T  7043909 ggatattgcatattaaatataggagttggggttcgaactccagactcctcacttctccacatttaaaatgt 7043979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 25235856 - 25235782
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    ||||||||| |||||||||||| |||||||||  | ||| ||||||||||||  | ||||| ||| |||||||||    
T  25235856 agcttagttggtagggatattgcatattatatgcaggggctggggttcgaaccccagacactccacttctccaca 25235782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 15208543 - 15208612
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||| |||||||||||| |    ||||||||||| |||||||| ||| ||||||||| ||||    
T  15208543 gtagggatattgcatattatatataggaaccggggttcgaacctcggacactccacttctccacaattaa 15208612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 23778874 - 23778805
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||  |||||||||  | ||||||||||||||||  | ||||||||| ||||||||| ||||    
T  23778874 gtagggatattacatattatatgcaggggttggggttcgaaccccagacaccccacttctccacaattaa 23778805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 25526459 - 25526504
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaa 257  Q
    |||| |||||||||||||||||||||| |||| |||||| ||||||    
T  25526459 agttggtagggatattgtatattatatgtaagcgttgggattcgaa 25526504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 19963797 - 19963853
Alignment:
Q  211 tagttagtagggatattgtatattatatataagggttggggttcgaacttcggacac 267  Q
    ||||| |||||||||||| |||||||||  | |||| ||||||||||| ||||||||    
T  19963797 tagttggtagggatattgcatattatatgcaggggtcggggttcgaacctcggacac 19963853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 29406404 - 29406448
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||||||||||| |||||| |||| |||||||||||||||    
T  29406404 gggtcggggttcgaactccggacaacccacttctccacatttaat 29406448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 32955243 - 32955315
Alignment:
Q  214 ttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||||||| || || |||  | | || ||| ||||||| |||||||||||| ||||||||||||||    
T  32955243 ttagtagggatattgcatgttgtatgcatgagtcgggattcgaacctcggacaccccacttctccacatttaa 32955315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 36099201 - 36099149
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||||||||||  ||||||||||| |||||||||||||| |||| || |||||    
T  36099201 ggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctcc 36099149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 46791227 - 46791187
Alignment:
Q  247 tggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||||| ||||||||||| |||| ||||||||||    
T  46791227 tggggttcgaactccggacaccccacttcttcacatttaat 46791187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 47929272 - 47929340
Alignment:
Q  223 atattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||||| |||||||||  | |||| | ||||||||| ||||| |||||| |||||||||||||| ||||    
T  47929272 atattgcatattatatgcaggggtcgaggttcgaacctcggaaaccccacttctccacatttaaaatgt 47929340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 4659435 - 4659497
Alignment:
Q  223 atattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||||    
T  4659435 atattgtatattatatataggggctggggttcgaactccggacaccccacttctccacattta 4659497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 17777208 - 17777138
Alignment:
Q  221 ggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    ||||||||||||||||||  | |||| |||||||||||  ||||||||||| |||||||||||||| ||||    
T  17777208 ggatattgtatattatatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaatgt 17777138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 1844828 - 1844907
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  ||||||||||| |||||||||||| ||||||||| ||||    
T  1844828 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaacctcggacaccccacttctccacaattaa 1844907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 4878232 - 4878298
Alignment:
Q  219 agggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    |||||||||||||||||||| || |||   ||||||||||  ||||||||||| |||||||||||||    
T  4878232 agggatattgtatattatatgtaggggccagggttcgaaccccggacaccccacttctccacattta 4878298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 32609241 - 32609167
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||  ||| || |||||||||||| ||||||| ||| ||||||||| ||||    
T  32609241 agttggtagggatattgcatattatatgcaagagtcggggttcgaactccggacactccacttctccacaattaa 32609167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 2950410 - 2950349
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctcca 279  Q
    ||||||||||| |||||||||  | |||||||||||||||  |||||||| |||||||||||    
T  2950410 tagggatattgcatattatatgcaggggttggggttcgaatctcggacactccatttctcca 2950349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 7717628 - 7717571
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||| |||||||||||||||||||| ||| |||||||||||||| |||| || |||||    
T  7717628 gggtcggggttcgaacttcggacactccacttctccacatttaaaatgtgtgagctcc 7717571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 542074 - 542006
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||| ||||||||||||  |||| |||||||||| || ||||| ||| ||||||||| ||||    
T  542074 tagggatattgcatattatatatagtggtttgggttcgaacatcagacactccacttctccacaattaa 542006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 11050816 - 11050744
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctcca 279  Q
    |||| |||| |||||||||||  |||||||||  | ||| ||||||||||||| ||||||||||| |||||||    
T  11050816 agctcagttggtagggatattacatattatatgcaggggctggggttcgaactccggacaccccacttctcca 11050744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 25516035 - 25515995
Alignment:
Q  251 gttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  25516035 gttcgaacttcggacaccccacttctccacatttaaaatgt 25515995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 5062313 - 5062368
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacac 267  Q
    |||| |||||||||||| |||||||||||| |||||| ||||||||| || |||||    
T  5062313 agttggtagggatattgcatattatatataggggttgtggttcgaacctcagacac 5062368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 33228992 - 33228913
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  33228992 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 33228913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 281
Target Start/End: Original strand, 5612977 - 5613039
Alignment:
Q  219 agggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||||||||| |||||||||  |||||  |||||||||||  ||||||||||| |||||||||    
T  5612977 agggatattgcatattatatgcaagggccggggttcgaaccccggacaccccacttctccaca 5613039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 11160691 - 11160741
Alignment:
Q  223 atattgtatattatatataagggttggggttcgaacttcggacaccccatt 273  Q
    |||||| ||||||||||||||||||| | ||||||||||||| ||| ||||    
T  11160691 atattgcatattatatataagggttgagattcgaacttcggataccacatt 11160741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 291
Target Start/End: Complemental strand, 27463708 - 27463678
Alignment:
Q  261 cggacaccccatttctccacatttaatatgt 291  Q
    |||||||||||||||||||||||||||||||    
T  27463708 cggacaccccatttctccacatttaatatgt 27463678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 33222208 - 33222134
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| ||||||||| || || | || |||| ||| |||||||||||| ||||||||| ||||    
T  33222208 agttggtagggatattgcatattatatgtatggatcggcgttcaaacctcggacaccccacttctccacaattaa 33222134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 7379654 - 7379581
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    |||| ||| |||||||| |||||||||  |  ||| |||||||||| | || ||||||||||||||||||||||    
T  7379654 agttggtaaggatattgcatattatatgcagaggtcggggttcgaattccgaacaccccatttctccacattta 7379581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 14835307 - 14835371
Alignment:
Q  222 gatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||||||||||||||||  | ||| | |||||||||||| ||| |||||| |||||||||||||||    
T  14835307 gatattgtatattatatgcaggggcttgggttcgaactt-ggagaccccacttctccacatttaat 14835371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 34434451 - 34434402
Alignment:
Q  209 cttagttagtagggatattgtatattatatataagggttggggttcgaac 258  Q
    |||||||  |||||||||||||||||||||  | ||||||||||||||||    
T  34434451 cttagttgatagggatattgtatattatatgcaggggttggggttcgaac 34434402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 36748933 - 36748990
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||| ||||||||||||||| |||| ||| |||||||||||||| |||| || |||||    
T  36748933 gggtcggggttcgaacttcgaacactccacttctccacatttaaaatgtgtgagctcc 36748990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 44186456 - 44186533
Alignment:
Q  209 cttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||| |||||||||||  |||||||||  |  || || ||||||||| |||||||||||| ||||||||| ||||    
T  44186456 cttagttggtagggatattacatattatatgcagcggctgtggttcgaacctcggacaccccacttctccacaattaa 44186533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 3596297 - 3596341
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||||||||||  ||||||||||| |||||||||||||||    
T  3596297 gggtcggggttcgaaccccggacaccccacttctccacatttaat 3596341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 13242754 - 13242710
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| ||||||||||| ||||||||| || |||||||||||||||    
T  13242754 gggtcggggttcgaacctcggacacctcacttctccacatttaat 13242710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 23919536 - 23919456
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| ||||||| |||| ||| |||||  | |||| ||||||||||   | |||||||||||||||||||||||||    
T  23919536 agctcagttggtagggacattgcataatatatggaggggtcggggttcgaatcccagacaccccatttctccacatttaat 23919456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 25406713 - 25406673
Alignment:
Q  231 tattatatataagggttggggttcgaacttcggacacccca 271  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  25406713 tattatatatatgggtcggggttcgaactccggacacccca 25406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 25932547 - 25932623
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatt 283  Q
    |||| |||| ||||||||||||||||||| ||  ||||| ||  ||||||||| | ||||||||| | |||||||||    
T  25932547 agctcagttggtagggatattgtatattaaatgcaagggctgacgttcgaactccagacaccccactactccacatt 25932623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 27497587 - 27497507
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||||||||||| || ||||||  ||||| ||| ||| |||| ||  |||||||| |||||||||||||||    
T  27497587 agctcagttggtagggatattgcatgttatatgcaagggctggagtttgaacctcaaacaccccacttctccacatttaat 27497507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 28194654 - 28194722
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||| |||||||||  | ||| ||| ||||||||  ||||||||||| ||||||||| ||||    
T  28194654 tagggatattgcatattatatgcaggggctggagttcgaaccccggacaccccacttctccacaattaa 28194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 28195193 - 28195113
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||||||||||| |||||||||  |||||  ||||||| |||  |||| |||||| ||||||| |||||||    
T  28195193 agctcagttggtagggatattgcatattatatgcaagggcaggggttctaaccccggataccccacttctccatatttaat 28195113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 30811895 - 30811855
Alignment:
Q  231 tattatatataagggttggggttcgaacttcggacacccca 271  Q
    ||||| |||||||||||||| ||||||||||||||| ||||    
T  30811895 tattacatataagggttgggattcgaacttcggacatccca 30811855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 41246409 - 41246477
Alignment:
Q  219 agggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||| |||||||| | ||| ||||||  |||||||||||  ||||||||||| ||||| |||||||||    
T  41246409 agggacattgtatagtttatgtaagggccggggttcgaaccccggacaccccacttctctacatttaat 41246477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 44558053 - 44558093
Alignment:
Q  247 tggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||||  ||||||||||| |||||||||||||||    
T  44558053 tggggttcgaaccccggacaccccacttctccacatttaat 44558093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 44898497 - 44898457
Alignment:
Q  251 gttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    ||||||||| ||||||||||| |||||||||||||| ||||    
T  44898497 gttcgaactccggacaccccacttctccacatttaaaatgt 44898457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 8241061 - 8241145
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||| |||| |||||||||||| |||||||||  |||||| |||||||||||  ||||||||||| |||||||||||||| ||||    
T  8241061 agctcagttggtagggatattgcatattatatgcaagggtcggggttcgaaccccggacaccccacttctccacatttaaaatgt 8241145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 20145623 - 20145543
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||| |||||||||||| ||| | |||  |||||  ||||||||||| |||||||||||| |||||||||||||||    
T  20145623 agcttagttggtagggatattgcataatttatgcaagggccggggttcgaacctcggacaccccacttctccacatttaat 20145543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 40361638 - 40361574
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacacccca 271  Q
    |||| |||| |||||||||||| |||||||||  ||||||||||||||||||| |||||||||||    
T  40361638 agctcagttggtagggatattgcatattatatgcaagggttggggttcgaactccggacacccca 40361574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 4153563 - 4153637
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| || |||||| || ||||||||||||||||||||||||| | | ||||||||| ||||    
T  4153563 agttggtagggatattgcattttatatgtatgggttggggttcgaacttcggacactctacttctccacaattaa 4153637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 5891082 - 5891124
Alignment:
Q  229 tatattatatataagggttggggttcgaacttcggacacccca 271  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  5891082 tatattatatgtaagggttggggttcgaacttcggacacccca 5891124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 12891568 - 12891646
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    |||| |||| |||||||||||| ||||||||| || |||  |||||||||||  ||||||||||| |||||||||||||    
T  12891568 agctcagttggtagggatattgcatattatatgtaggggccggggttcgaaccccggacaccccacttctccacattta 12891646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 32623419 - 32623488
Alignment:
Q  222 gatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    ||||||| |||||||||| | |||| | |||||||||| |||||||||||||||||||| ||||| ||||    
T  32623419 gatattgcatattatatacaggggtcgaggttcgaactccggacaccccatttctccacgtttaaaatgt 32623488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 23292476 - 23292396
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||||||||||| || ||||||  | || ||||||||||||| |||||||||||| ||||||||| |||||    
T  23292476 agctcagttggtagggatattgcatgttatatgcagggtttggggttcgaacctcggacaccccacttctccacaattaat 23292396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 33018550 - 33018507
Alignment:
Q  242 agggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  33018550 agggtcggggttcgaacttcggacaccccacttctccacattta 33018507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 11348822 - 11348768
Alignment:
Q  233 ttatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||||| || |||||||||||||||| || |||||| ||||||||||||||||||    
T  11348822 ttatatgtaggggttggggttcgaacctcagacacctcatttctccacatttaat 11348768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 42718875 - 42718802
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||  | | |||||||||||||| |||||||| ||||||||||||| ||||    
T  42718875 agttggtagggatattgcatattatatgcaggagttggggttcgaac-tcggacactccatttctccacaattaa 42718802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 4418361 - 4418308
Alignment:
Q  247 tggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||| || |||||    
T  4418361 tggggttcgaacctcggacacctcatttctccacatttaaaatgtgtgagctcc 4418308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 6558822 - 6558891
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||| |||||||||  | |||| |||||||||||| ||||||||| | ||||||||| ||||    
T  6558822 gtagggatattgcatattatatgcaggggtcggggttcgaactccggacaccctacttctccacaattaa 6558891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 15241418 - 15241486
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||| |||||||||  | |||| ||||||||||| |||||||||||| ||||||||| ||||    
T  15241418 taggaatattgcatattatatgcaggggtcggggttcgaacctcggacaccccacttctccacaattaa 15241486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 35113010 - 35112942
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||| |||||||||  | ||||||||||||||||| ||||||| | | ||||||||| ||||    
T  35113010 tagggatattgcatattatatgcaggggttggggttcgaactccggacactctacttctccacaattaa 35112942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 41756469 - 41756537
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||| ||| ||||||||||||  ||||||||||||||  |||||||| | ||||||||||| ||||    
T  41756469 tagggatgttgcatattatatatagaggttggggttcgaatctcggacactctatttctccacaattaa 41756537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 42885840 - 42885892
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaact 259  Q
    |||| |||| |||| ||||||| ||||||||| ||||||||||||||||||||    
T  42885840 agctaagttggtagagatattgcatattatatgtaagggttggggttcgaact 42885892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 18597430 - 18597469
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcga 256  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  18597430 gtagggatattgcatattatatataggggttggggttcga 18597469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 32226288 - 32226225
Alignment:
Q  223 atattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||| |||||||||  | |||| ||||||||||| |||||||||||| ||||||||| ||||    
T  32226288 atattgcatattatatgcaggggtcggggttcgaacctcggacaccccacttctccacaattaa 32226225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 39886271 - 39886192
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||||||| || | | ||||||||||||  ||||||| ||| ||||||||| ||||    
T  39886271 agctcagttggtagggatattgcatattatatgtaggagctggggttcgaaccccggacactccacttctccacaattaa 39886192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 42916400 - 42916479
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| ||||||||||||||| ||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  42916400 agctcagttggtagggatattgtatgttatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 42916479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 16280262 - 16280336
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| ||||||| || |||||| || ||||||||||||||||  ||||||| ||| | ||||||||||||    
T  16280262 agttggtagagatattgcattttatatgtaggggttggggttcgaaccccggacactccactcctccacatttaa 16280336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 18026882 - 18026808
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||||||||||| |||  | |||||||||  ||||| ||||| ||||||||| ||||    
T  18026882 agttggtagagatattgtatattatatataggggccgaggttcgaaccccggactccccacttctccacaattaa 18026808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 3166002 - 3166071
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||| |||| ||| | ||| || |||||||||||||||| |||||| ||||| || |||||||||||    
T  3166002 gtagggacattgcataatttatgtaggggttggggttcgaacctcggacgccccacttttccacatttaa 3166071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 3741001 - 3741058
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||| |||||||||||  ||||||||||| |||||||||||||| |||| || |||||    
T  3741001 gggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctcc 3741058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 24477879 - 24477916
Alignment:
Q  250 ggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  24477879 ggttcgaacctcggacaccccacttctccacatttaat 24477916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 33999097 - 33999150
Alignment:
Q  233 ttatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||| || ||||||||||||||||  ||||||| ||||||||||||| ||||    
T  33999097 ttatatgtaggggttggggttcgaaccccggacactccatttctccacagttaa 33999150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 3198338 - 3198418
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| ||||||| |||| ||| |||||  | |||||| |||||||||  ||||||||| | |||||||||||||||    
T  3198338 agctcagttggtagggacattgcataatatatgcaggggttgaggttcgaaccccggacaccctacttctccacatttaat 3198418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 20430616 - 20430656
Alignment:
Q  247 tggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||| | |||||||||||||||||||| ||||||    
T  20430616 tggggttcgaaatccggacaccccatttctccacctttaat 20430656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 42842935 - 42842859
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatt 283  Q
    |||| |||| |||| ||||||||||||||||||||||||  ||||||| |||  |  ||| |||| |||||||||||    
T  42842935 agctcagttggtagagatattgtatattatatataagggccggggttcaaaccccaaacatcccacttctccacatt 42842859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 291
Target Start/End: Complemental strand, 29559728 - 29559649
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||| |||||||||||| ||||||||| ||  ||| |||||| ||||||||||||||||| |||||||||||||| ||||    
T  29559728 agttggtagggatattgcatattatatgtagaggtcggggtttgaacttcggacaccccacttctccacatttaaaatgt 29559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 29098708 - 29098783
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||||||||||||||||  | |||| |||||||||||  ||||||||||||||||||| |||||||    
T  29098708 agttggtagagatattgtatattatatgcaggggtcggggttcgaaccccggacaccccatttctccatatttaat 29098783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 50675796 - 50675722
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||| | |||||| ||||||||||  |||||||||| ||||||||| ||||    
T  50675796 agttggtagggatattgcatattatatacaggggttgtggttcgaactctggacaccccacttctccacaattaa 50675722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 25279118 - 25279039
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||| |||||||||||||||||||||| || |||  ||| || ||||  ||||||||||| ||||||||| ||||    
T  25279118 agcttagttggtagggatattgtatattatatgtaggggccgggatttgaaccccggacaccccacttctccacaattaa 25279039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 51155151 - 51155072
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| ||||| |||||| ||||||||| || ||| |||||||||||| || ||||||||| ||||||||| ||||    
T  51155151 agctcagttggtaggaatattggatattatatgtaggggctggggttcgaacctccgacaccccacttctccacaattaa 51155072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 3748661 - 3748587
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| ||||||||||||||||||||||  | ||||||||||||||||  |||||| | || |||||||||    
T  3748661 agctcagttggtagggatattgtatattatatgcaggggttggggttcgaaccccggacatctcacttctccaca 3748587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 7269966 - 7270045
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | | | ||||||||||||| ||||||| ||| ||||||||| ||||    
T  7269966 agctcagttggtagggatattgcatattatatgcaggagctggggttcgaactccggacactccacttctccacaattaa 7270045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 10482912 - 10482833
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | | | ||||||||||||| ||||||| ||| ||||||||| ||||    
T  10482912 agctcagttggtagggatattgcatattatatgcaggagctggggttcgaactccggacactccacttctccacaattaa 10482833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 17602735 - 17602656
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||||||| || |||  | |||||||||  ||||||||||| ||||||||| ||||    
T  17602735 agctcagttggtagggatattgcatattatatgtaggggccgaggttcgaaccccggacaccccacttctccacaattaa 17602656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 19996511 - 19996432
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | | ||||||||||||||  ||||||| ||| ||||||||| ||||    
T  19996511 agctcagttggtagggatattgcatattatatgcaggagttggggttcgaaccccggacactccacttctccacaattaa 19996432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 26880224 - 26880267
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||    
T  26880224 gggtcggggttcgaacttcagacaccccacttctccacatttaa 26880267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 32144595 - 32144674
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||| |||||| ||||| |||||||||  | | |  |||||||||||  ||||||||||||||||||||| ||||    
T  32144595 agcttagttggtaggggtattgcatattatatgcaggagccggggttcgaaccccggacaccccatttctccacaattaa 32144674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 39719946 - 39720025
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  39719946 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 39720025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 41936466 - 41936387
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  41936466 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 41936387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 53056020 - 53055981
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  53056020 ggggttcgaacctcggacaccctatttctccacatttaat 53055981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 53163605 - 53163676
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctcc 278  Q
    |||| |||| |||||||||||| ||||||||| || |||  |||||||||||  ||||||||||| ||||||    
T  53163605 agctcagttggtagggatattgcatattatatgtaggggccggggttcgaaccccggacaccccacttctcc 53163676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 11206006 - 11206080
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||| ||||||||||| ||||||||| ||  ||||||||||||||   |||| |||||| ||||||||| ||||    
T  11206006 agttattagggatattgcatattatatgtagaggttggggttcgaatcccggataccccacttctccacagttaa 11206080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 30779626 - 30779552
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||  | |||| |||||||||||   |||||||||| |||||||||    
T  30779626 agctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccctggacaccccacttctccaca 30779552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 34102665 - 34102591
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  34102665 agttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 34102591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 39966133 - 39966059
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||  | |||||| ||||||||| || ||||| ||| |||||||||    
T  39966133 agctcagttggtagggatattgcatattatatgcaggggttgaggttcgaacctcagacactccacttctccaca 39966059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 53432791 - 53432717
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  53432791 agttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 53432717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 25884011 - 25883954
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||| |||||||||||  ||||||||||| |||||||||||||| |||| || |||||    
T  25884011 gggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctcc 25883954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 34847559 - 34847616
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccc 269  Q
    |||| |||||||||||| |||||||||  | |||| |||||||||||| |||||||||    
T  34847559 agttggtagggatattgcatattatatgcaggggtcggggttcgaactccggacaccc 34847616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 49750454 - 49750381
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    ||||||||||| |||||||||  | ||| ||||||||||| | | ||||||||| |||| ||||||||| ||||    
T  49750454 tagggatattgcatattatatgcaggggctggggttcgaattccagacaccccacttcttcacatttaaaatgt 49750381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 7251849 - 7251920
Alignment:
Q  215 tagtagggatattgtatattatatataagggttggggttcgaacttcggacacc-ccatttctccacatttaa 286  Q
    |||||||||||||| ||||||||||||  |||||| ||||||| || ||||||| | ||||||| ||||||||    
T  7251849 tagtagggatattgcatattatatatagaggttggagttcgaa-tttggacacctctatttctctacatttaa 7251920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 27329950 - 27329898
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||||||||||  ||||||||||| |||||||||||||| |||| || |||||    
T  27329950 ggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctcc 27329898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 44685227 - 44685147
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||| |||| ||||||| |||||||||||| ||| || | |||||||  |  |||||||| ||||||||| |||||    
T  44685227 agcttagttggtagagatattgcatattatatataggggctgagattcgaaccccaaacaccccacttctccacaattaat 44685147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 45871028 - 45871088
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacac 267  Q
    |||| |||| ||||||||||||||||||||||  | |||| |||||||||||  |||||||    
T  45871028 agctcagttggtagggatattgtatattatatgcaggggtcggggttcgaaccccggacac 45871088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 49983767 - 49983687
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| ||||||| |||||||| | |||  | ||||||||||||||||  ||||||||| | ||||||||| |||||    
T  49983767 agctcagttggtagggacattgtataatttatgcaggggttggggttcgaaccccggacaccctacttctccacaattaat 49983687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 51772902 - 51772962
Alignment:
Q  209 cttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccc 269  Q
    ||||||| |||||||||||| |||||||||  | |||| ||||||||||| || |||||||    
T  51772902 cttagttggtagggatattgcatattatatgcaggggtcggggttcgaacctcagacaccc 51772962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 51879147 - 51879199
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||||||||||  ||||||||||| |||||||||||||| |||| || |||||    
T  51879147 ggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctcc 51879199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 52046444 - 52046372
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctcca 279  Q
    |||| |||| |||||||||||| || ||||||| || ||| |||||||||||   |||||| |||||||||||    
T  52046444 agctcagttggtagggatattgcattttatatacaatggtcggggttcgaaccctggacactccatttctcca 52046372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 28564399 - 28564325
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||||||||| | |||||||  | |||||||||||||||| |||||||||||| ||||||||| ||||    
T  28564399 agttagtagggatattgcagattatatgcaggggttggggttcgaacctcggacaccccacttctccacaattaa 28564325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 43021681 - 43021601
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||| ||||||| | || ||||| |||  | |||| ||||||||||| |||||||||||| |||||||||||||||    
T  43021681 agcttagttggtagggacaatgcatattttatgcaggggtcggggttcgaacctcggacaccccacttctccacatttaat 43021601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 42490469 - 42490390
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||| |||||||||||  ||||||||||| ||||||||| ||||    
T  42490469 agctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggacaccccacttctccacaattaa 42490390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 50536975 - 50537050
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacat 282  Q
    |||||| || |||||||||||| |||| ||||  | | |||||||||||||| |||||||||||| ||||||||||    
T  50536975 agcttaattggtagggatattgcatataatatgcaggagttggggttcgaacctcggacaccccacttctccacat 50537050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 15165945 - 15165871
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| ||||| |||||| || ||||||| | ||||||  |||||||| |||||||||||| ||||||||||||||    
T  15165945 agttggtaggaatattgcatgttatatacaggggttgcagttcgaacctcggacaccccacttctccacatttaa 15165871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 44732649 - 44732723
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||  |||||  |||||||||||  ||||||||||| ||||||||| ||||    
T  44732649 agttggtagggatattgcatattatatgcaagggccggggttcgaaccccggacaccccacttctccacaattaa 44732723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 12048173 - 12048104
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||||||||||||||  | ||| |||||||||||   ||||||||||| ||||||||| ||||    
T  12048173 gtagggatattgtatattatatgcaggggctggggttcgaatcccggacaccccacttctccacaattaa 12048104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 28317234 - 28317291
Alignment:
Q  230 atattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||| |||||| ||||||||||||||||  |||||| |||| |||||||||||||||    
T  28317234 atattgtatataggggttggggttcgaaccccggacatcccacttctccacatttaat 28317291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 51942311 - 51942379
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||||||||||| |||||||||| | |||| |||||||||||  ||||||||||| |||||||||    
T  51942311 agttggtagggatattgcatattatataca-gggtcggggttcgaaccccggacaccccacttctccaca 51942379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 52426961 - 52426892
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||| |||||||||  | |||  | |||||||||| | |||||||||||||||||||||||||    
T  52426961 tagggatattgcatattatatgcaggggccgtggttcgaactccagacaccccatttctccacatttaat 52426892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 23933127 - 23933047
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| ||||||| |||||||| | ||| || |||| ||||||||||||||| |||||||| ||||| ||| |||||    
T  23933127 agctcagttggtagggacattgtataatttatctaggggtcggggttcgaacttcgaacaccccacttctctacaattaat 23933047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 48368509 - 48368549
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatt 283  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  48368509 gggttggggttcgaacctcggacaccccacttctccacatt 48368549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 5431072 - 5431005
Alignment:
Q  233 ttatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||||| || |||| ||||||||||||| |||||||||| || ||||||||||| |||| || |||||    
T  5431072 ttatatgtaggggtcggggttcgaactttggacaccccacttatccacatttaaaatgtgtgagctcc 5431005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 6130092 - 6130013
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | | || |||||||||||| ||||||| ||| ||||||||| ||||    
T  6130092 agctcagttggtagggatattgcatattatatgcaggagtcggggttcgaactccggacactccacttctccacaattaa 6130013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 7000980 - 7000941
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  7000980 ggggttcgaactccggacaccccacttctccacatttaat 7000941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 11860082 - 11860133
Alignment:
Q  236 tatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||||| |||| |||||||||||  ||||||||||| |||||||||||||||    
T  11860082 tatataggggtcggggttcgaaccccggacaccccacttctccacatttaat 11860133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 19564171 - 19564132
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  19564171 ggggttcgaacctcggacaccccacttctccacatttaat 19564132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 21265667 - 21265746
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  21265667 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 21265746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 30360423 - 30360502
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||| |||| ||||||| || |||||| || |||| |||||||||||  ||||||| ||| ||||||||| ||||    
T  30360423 agcttagttggtagagatattgcattttatatgtaggggtcggggttcgaaccccggacactccacttctccacagttaa 30360502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 47930730 - 47930651
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | ||| |||||||||||| ||||| |||||| |||| |||| ||||    
T  47930730 agctcagttggtagggatattgcatattatatgcaggggctggggttcgaacctcggataccccacttcttcacaattaa 47930651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 291
Target Start/End: Complemental strand, 1604273 - 1604199
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||||||||||| ||||||||| || |||| |||||||||||    |||||| || |||||||||||||| ||||    
T  1604273 gtagggatattgcatattatatgtaggggtcggggttcgaacccttgacaccacaattctccacatttaaaatgt 1604199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 7166286 - 7166212
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||  | ||| ||||||||||||  ||||||| ||| |||||||||    
T  7166286 agctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccggacactccacttctccaca 7166212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 33207216 - 33207290
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| |||||||||    
T  33207216 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccaca 33207290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 9779682 - 9779739
Alignment:
Q  234 tatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||||| |||| ||||||||||||| ||| |||| ||||||||||| |||||| ||||    
T  9779682 tatatacaaggtttggggttcgaacctcgtacactccatttctccaaatttaaaatgt 9779739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 3768033 - 3767953
Alignment:
Q  207 agcttagttagtagggatattgtatatt-atatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||| ||||  | ||||||||||||||| | ||||||||||| ||||| ||| ||||    
T  3768033 agctcagttggtagggatattgcatatttatatgcaggggttggggttcgaattccggacaccccacttctctacaattaa 3767953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 7191054 - 7191122
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||| |||||||||  | ||| ||||||||||||  |||||||| || ||||||||| ||||    
T  7191054 tagggatattgcatattatatgcaggggctggggttcgaaccccggacacctcacttctccacaattaa 7191122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 18512593 - 18512541
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||||||||||  ||||||||||| |||||||||||||| |||| || |||||    
T  18512593 ggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctcc 18512541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 24874982 - 24875062
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||||||||||| ||| | |||  | |||  ||||||||||| |||||||||||| ||||||| |||||||    
T  24874982 agctcagttggtagggatattgcataatttatgcatgggcaggggttcgaacctcggacaccccacttctccatatttaat 24875062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 34656439 - 34656375
Alignment:
Q  222 gatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||| || ||||||  | |||||||||||||||| |||||||| ||| ||||||||| ||||    
T  34656439 gatattgcattttatatgcaggggttggggttcgaacctcggacactccacttctccacaattaa 34656375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 39670852 - 39670808
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||||||||| | |||| |||| |||||||||||||||    
T  39670852 gggttggggttcgaactccagacatcccacttctccacatttaat 39670808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 1777 - 1706
Alignment:
Q  215 tagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||||  ||||||||| |||||||||||||||||||  ||||||| ||| ||||||||| ||||    
T  1777 tagtagggatattacatattatatgtaagggttggggttcgaaccccggacactccacttctccacaattaa 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 94032 - 93962
Alignment:
Q  218 tagggatattg--tatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||  |||||||||| || ||||||||||||||||| ||||||||||| ||||||||| ||||    
T  94032 tagggatattgcatatattatatgtaggggttggggttcgaactccggacaccccacttctccacaattaa 93962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 50049 - 49986
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    ||||||||||| ||||||||| || ||||| ||||||||||| ||||||| | | |||||||||    
T  50049 tagggatattgcatattatatgtaggggttagggttcgaactccggacactctacttctccaca 49986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 8698639 - 8698560
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||||||| || |||||||||||||||   ||||||||||| |||| |||||||||    
T  8698639 agctcagttggtagggatattgcatattatatgtaggggttggggttcgaatcccggacaccccacttcttcacatttaa 8698560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 279
Target Start/End: Original strand, 40362059 - 40362131
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctcca 279  Q
    |||| ||||||||||||||||| |||||||||  | |||| ||||||||||| |||||||| ||| |||||||    
T  40362059 agctcagttagtagggatattgcatattatatgcaggggtcggggttcgaacctcggacactccacttctcca 40362131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 34266023 - 34266102
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | | |||||||||||||| |||||||| ||| ||||||||| ||||    
T  34266023 agctcagttggtagggatattgcatattatatgcaggagttggggttcgaacctcggacactccacttctccacaattaa 34266102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 44444560 - 44444635
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||||||||||| |||||||||  | ||| ||||||||||||  ||||||||||| ||||||||| |||||    
T  44444560 agttggtagggatattgcatattatatgcaggggctggggttcgaaccccggacaccccacttctccacaattaat 44444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 24480875 - 24480801
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||||||||  | ||| |||||||||||| | |||||||||| ||||||||| ||||    
T  24480875 agttggtagagatattgtatattatatgcaggggctggggttcgaaccttggacaccccacttctccacaattaa 24480801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 285
Target Start/End: Original strand, 31712572 - 31712638
Alignment:
Q  219 agggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    |||||||||||||||||||| || |||   ||||||||||  ||||||||||| |||||||||||||    
T  31712572 agggatattgtatattatatgtaggggccagggttcgaaccccggacaccccacttctccacattta 31712638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 36433557 - 36433627
Alignment:
Q  218 tagggatattgtatattatatataagggttgggg-ttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||||| |||||||| | |||| | ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  36433557 tagggacattgtataatttatacaggggttgggggttcgaatctcggacaccccatttctccacatttaat 36433627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 41458311 - 41458385
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| |||||||||  | ||| |||| ||||||| |||||||| ||| ||||||||||||||    
T  41458311 agttggtagggatattgcatattatatgcaggggctgggtttcgaacctcggacactccacttctccacatttaa 41458385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 43656047 - 43656121
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| ||||||||| || |||| ||||||||||| |||||||  ||| |||||||||    
T  43656047 agctcagttggtagggatattgcatattatatgtaggggtcggggttcgaacctcggacattccacttctccaca 43656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 7388471 - 7388540
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||||||||||| |||||||||  | |||||||||||| |||| || |||| |||||||||||||    
T  7388471 agttggtagggatattgcatattatatgcaggggttggggttcaaactccgaacactccatttctccaca 7388540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 34873133 - 34873190
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||| || |||||    
T  34873133 gggtcggggttcgaacctcggacaccccacttctccacatttaaaatgtgtgagctcc 34873190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 36035202 - 36035145
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||| ||||||||||| |||||||||||| |||||||||||||| |||| || |||||    
T  36035202 gggtcggggttcgaacctcggacaccccacttctccacatttaaaatgtgtgagctcc 36035145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 7678994 - 7679034
Alignment:
Q  251 gttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  7678994 gttcgaacttcggacactccatttctccacatttaaaatgt 7679034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 40904578 - 40904626
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||||||||||||||| ||||||||| || |||||||||||||| ||||    
T  40904578 gggttggggttcgaacctcggacacctcacttctccacatttaaaatgt 40904626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 42801688 - 42801636
Alignment:
Q  227 tgtatattatatataagggttggggttcgaacttcggacaccccatttctcca 279  Q
    |||||||||||| || |||| ||||||||||| |||||||||||| |||||||    
T  42801688 tgtatattatatgtaggggtcggggttcgaacctcggacaccccacttctcca 42801636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 44089014 - 44088935
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||| ||||||| || |||||| || ||||  ||||||||||||||||||||||| ||||||| |||||||    
T  44089014 agctcagttggtagagatattgcatgttatatgta-gggtaagggttcgaacttcggacaccccacttctccatatttaat 44088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 287
Target Start/End: Complemental strand, 3949135 - 3949060
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||||||||||| ||||||||||   ||||||| |||| ||  |||||||||||| ||||||||| |||||    
T  3949135 agttggtagggatattgcatattatatactggggttggagttcaaatctcggacaccccacttctccacaattaat 3949060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 10587336 - 10587257
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  || ||| | | |||||||| ||||||||||| ||||||||| ||||    
T  10587336 agctcagttggtagggatattgcatattatatgcaaaggtcgagattcgaactccggacaccccacttctccacaattaa 10587257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 24296927 - 24296876
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaac 258  Q
    |||| ||||||||||||||||| |||||||||  | ||||||||||||||||    
T  24296927 agctcagttagtagggatattgcatattatatgcaggggttggggttcgaac 24296876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 27077156 - 27077077
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||| ||||||||||   ||||||||||| ||||||||| ||||    
T  27077156 agctcagttggtagggatattgcatattatatgcaggggtcggggttcgaatcccggacaccccacttctccacaattaa 27077077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 34894380 - 34894459
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  34894380 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacagttaa 34894459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 291
Target Start/End: Original strand, 35880856 - 35880934
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||| |||||||||||||||||||||| || |||||||||||| |||  ||| || ||| |||||||| |||||| ||||    
T  35880856 agttggtagggatattgtatattatatgtaggggttggggttcaaaccacgggca-cccgtttctccatatttaaaatgt 35880934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 10573112 - 10573186
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||  | ||||||||||||||||  || |||| ||| |||||||||    
T  10573112 agctcagttggtagggatattgcatattatatgcaggggttggggttcgaaccccgaacactccacttctccaca 10573186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 16449136 - 16449210
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||  | ||||||||||||||||  | ||||| ||| |||||||||    
T  16449136 agctcagttggtagggatattgcatattatatgcaggggttggggttcgaaccccagacactccacttctccaca 16449210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 2114937 - 2114974
Alignment:
Q  250 ggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  2114937 ggttcgaactccggacaccccacttctccacatttaat 2114974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 2626086 - 2626045
Alignment:
Q  245 gttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||    
T  2626086 gttggggttcgaactccggacaccccacttctccacaattaa 2626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 10083179 - 10083252
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    |||| |||||||||||| |||||||||  | |||| | |||||||||  ||||||||||| ||||||| |||||    
T  10083179 agttggtagggatattgcatattatatgcaggggtcgaggttcgaaccccggacaccccacttctccatattta 10083252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 300
Target Start/End: Original strand, 31024345 - 31024398
Alignment:
Q  247 tggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    ||||||||||||  ||||||||||| |||||||||||||| |||| || |||||    
T  31024345 tggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctcc 31024398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 5328626 - 5328542
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  |||||||| || ||||||||| |||| ||||    
T  5328626 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaaatgt 5328542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 5683775 - 5683843
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    ||||| |||||| |||||||||  | ||||||||||||||||  | ||||||| | |||||||||||||    
T  5683775 gtaggaatattgcatattatatgcaggggttggggttcgaaccccagacaccctacttctccacattta 5683843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 11850708 - 11850668
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaac 258  Q
    ||||||||||| ||||||||| ||||||| |||||||||||    
T  11850708 tagggatattgcatattatatgtaagggtgggggttcgaac 11850668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 13059195 - 13059143
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||||||||||  | ||||||||| |||||||||||||| |||| ||||||||    
T  13059195 ggggttcgaacccctgacaccccacttctccacatttaaaatgtgtgtgctcc 13059143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 13105143 - 13105195
Alignment:
Q  248 ggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    ||||||||||| || ||||||||| |||||||||||||| |||| || |||||    
T  13105143 ggggttcgaacctcagacaccccacttctccacatttaaaatgtgtgagctcc 13105195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 13290687 - 13290763
Alignment:
Q  215 tagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||||| |||||| ||||||||||  | || | ||||||||||  |||||||||||||||||  |||||||| ||||    
T  13290687 tagtagagatattatatattatatgcagggatcggggttcgaatctcggacaccccatttctttacatttaaaatgt 13290763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 22274670 - 22274590
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||| |||||||||||| |||||||||  | | |  |||||||||||  ||||||||||| ||||||||| |||||    
T  22274670 agctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacaccccacttctccacaattaat 22274590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 25890463 - 25890383
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||| ||||||| |||| ||| | |||  |||||  |||||||||||  ||||||||||| ||||||||| |||||    
T  25890463 agcttagttggtagggacattgcataatttatgcaagggccggggttcgaaccccggacaccccacttctccacaattaat 25890383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 39362276 - 39362352
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatt 283  Q
    |||| |||| |||||||||||| |||||||||  |  |||||| ||||||||  | ||||||||| |||||||||||    
T  39362276 agctcagttggtagggatattgcatattatatgcagaggttggagttcgaaccccagacaccccacttctccacatt 39362352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 978193 - 978114
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| ||||||||||||||||| |||||||||  | |||| |||||||||||  ||||||||||| ||||||||| ||||    
T  978193 agctcagttagtagggatattgcatattatatgcaggggtcggggttcgaacaccggacaccccacttctccacaattaa 978114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 34040695 - 34040762
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||||||||||||| ||||||| || |||||||| || |||||| |||||||||||| ||||    
T  34040695 tagggatattgtatattatatgtaagggtcggagttcgaac-tcagacacctcatttctccacaattaa 34040762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 5694930 - 5695001
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatt 283  Q
    |||| ||||||||||||||||||||||  | |||| || ||| |||| |||||||||||| |||||||||||    
T  5694930 agttggtagggatattgtatattatatgcaggggtaggagtttgaacctcggacaccccacttctccacatt 5695001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 22997347 - 22997426
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||||||| || |||| |||||||||||  ||||||||| | ||||||||| ||||    
T  22997347 agctcagttggtagggatattgaatattatatgtaggggtcggggttcgaaccccggacaccctacttctccacaattaa 22997426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 23791054 - 23790975
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||||||||| || |||| |||||||||||  ||||||||| | ||||||||| ||||    
T  23791054 agctcagttggtagggatattgaatattatatgtaggggtcggggttcgaaccccggacaccctacttctccacaattaa 23790975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 30885629 - 30885555
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||| | ||| ||||||||||||  | ||||| |||||||||||||    
T  30885629 agctcagttggtagggatattgcatattatatacaggggctggggttcgaaccccagacactccatttctccaca 30885555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 281
Target Start/End: Complemental strand, 19892330 - 19892261
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||||||||||| ||||||||| || |||| |||||||||||  ||||||| ||| |||||||||    
T  19892330 agttggtagggatattgcatattatatgtaggggtcggggttcgaaccccggacactccacttctccaca 19892261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 5944440 - 5944516
Alignment:
Q  210 ttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||| |||||||||||| |||||||||  | |||| ||||||| |||| | ||||||| ||||||||||| ||||    
T  5944440 ttagttggtagggatattgcatattatatgcaggggtcggggttcaaactccagacaccctatttctccacaattaa 5944516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 19374899 - 19374819
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    |||| |||||||||| |||||| |||||||||  | ||||||||||||||||  || |||| ||| ||||||| |||||||    
T  19374899 agctcagttagtaggaatattgcatattatatgcaggggttggggttcgaaccccgaacactccacttctccaaatttaat 19374819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Complemental strand, 19618777 - 19618706
Alignment:
Q  217 gtagggatattgtatattatatataa--gggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||| ||||||||||||   ||| ||||||||||||  ||||||||||| ||||||||| ||||    
T  19618777 gtagggatattgcatattatatatacaggggctggggttcgaaccccggacaccccacttctccacaattaa 19618706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 30527784 - 30527852
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||| ||| |||||||| | ||||| |||||||||||| |||||||| ||| |||| |||||    
T  30527784 tagggatattgcataatatatataggagttggagttcgaacttcgtacaccccacttcaccacttttaa 30527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 32788877 - 32788833
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||    
T  32788877 gggttggggttcgaactccggacaccccacttctacacatttaat 32788833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 2251849 - 2251928
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| ||| |||||  | |||  |||||||||||  ||||||||||| ||||||||||||||    
T  2251849 agctcagttggtagggatattgcatactatatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 2251928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 2500573 - 2500494
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||| |||||||||||| ||||||||| ||  ||| || ||||||| | ||||||| ||| ||||||||| ||||    
T  2500573 agcttagttggtagggatattgcatattatatgtagaggtcggagttcgaattccggacactccacttctccacaattaa 2500494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 3294775 - 3294854
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||| |||||||||||  ||||||||||| |||| |||| ||||    
T  3294775 agctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggacaccccacttcttcacaattaa 3294854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 7177306 - 7177385
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| ||||||||||||||| ||||||  | ||| ||||||||||||  | ||||||||| ||||||||| ||||    
T  7177306 agctcagttggtagggatattgtattttatatgcaggggctggggttcgaaccccagacaccccacttctccacaattaa 7177385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 2426075 - 2426149
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| ||||| |||||  |||||||||  ||||||||||||||||||  ||||||| ||| |||||||||    
T  2426075 agctcagttggtaggaatattacatattatatgcaagggttggggttcgaaccccggacactccacttctccaca 2426149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 3640525 - 3640599
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| ||| |||||  |||||  ||||||||||| |||||||| ||| |||||||||    
T  3640525 agctcagttggtagggatattgcatagtatatgcaagggccggggttcgaacctcggacactccacttctccaca 3640599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 3795833 - 3795759
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||  | ||| |||||||||||| || ||||| ||| |||||||||    
T  3795833 agctcagttggtagggatattgcatattatatgcaggggctggggttcgaacctcagacactccacttctccaca 3795759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 9435637 - 9435711
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccaca 281  Q
    |||| |||| |||||||||||| |||||||||  | ||| ||||||||||||  ||||||| ||| |||||||||    
T  9435637 agctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccccggacactccacttctccaca 9435711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 16913945 - 16913883
Alignment:
Q  221 ggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatt 283  Q
    |||||||| |||||||||  | |||| |||||||||||  ||||||| |||||||||||||||    
T  16913945 ggatattgcatattatatgcaggggtcggggttcgaaccccggacactccatttctccacatt 16913883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 16966453 - 16966375
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    |||| |||| |||||||||||| |||||||||  ||| || ||||||| |||| ||||||| ||| ||||||| |||||    
T  16966453 agctcagttggtagggatattgcatattatatgcaagtgtcggggttcaaactccggacactccacttctccatattta 16966375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 30704976 - 30705050
Alignment:
Q  212 agttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||||||||||| || |||||| || |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  30704976 agttggtagggatattgcatgttatatgtaggggccggggttcgaaccccggacaccccacttctccacaattaa 30705050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 33646855 - 33646925
Alignment:
Q  217 gtagggatattgtatatt-atatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||| ||||| ||||  | |||| ||||||||||| |||||||||||| ||||||||| ||||    
T  33646855 gtagggatattgcatatttatatgcaggggtcggggttcgaacctcggacaccccacttctccacaattaa 33646925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 216227 - 216296
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||||||||||| || ||||||  | ||  |||||||||||| |||||||||||| ||||||||| ||||    
T  216227 gtagggatattgcatgttatatgcagggtctggggttcgaacctcggacaccccacttctccacaattaa 216296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 3709893 - 3709954
Alignment:
Q  230 atattatatataagggttggggttcgaacttcggacaccccatttctccacatttaatatgt 291  Q
    |||||||||  ||||| ||||||||||||  | ||||||||| |||||||||||||| ||||    
T  3709893 atattatatgcaaggggtggggttcgaaccccagacaccccacttctccacatttaaaatgt 3709954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 18904312 - 18904369
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaatatgtctgtgctcc 300  Q
    |||| |||||||||||  ||||||||||| |||||||||||||| |||| || |||||    
T  18904312 gggtcggggttcgaaccccggacaccccacttctccacatttaaaatgtgtgagctcc 18904369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 27102645 - 27102694
Alignment:
Q  222 gatattgtatattatatataagggttggggttcgaacttcggacacccca 271  Q
    |||||||||||||||||  |||||||| |||||||| | |||||||||||    
T  27102645 gatattgtatattatattcaagggttgaggttcgaattccggacacccca 27102694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 27144467 - 27144516
Alignment:
Q  222 gatattgtatattatatataagggttggggttcgaacttcggacacccca 271  Q
    |||||||||||||||||  |||||||| |||||||| | |||||||||||    
T  27144467 gatattgtatattatattcaagggttgaggttcgaattccggacacccca 27144516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 32837364 - 32837405
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaact 259  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  32837364 tagggatattacatattatatgtaagggttggggttcgaact 32837405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 10628635 - 10628703
Alignment:
Q  217 gtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacattta 285  Q
    |||||||||||| |||||||||  | ||| ||| |||||||| |||||||||| | || ||||||||||    
T  10628635 gtagggatattgcatattatatgcaggggctggtgttcgaacatcggacaccctacttttccacattta 10628703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 31952316 - 31952360
Alignment:
Q  243 gggttggggttcgaacttcggacaccccatttctccacatttaat 287  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||||    
T  31952316 gggttggggttcgaaccccggacaccccacttctccacaattaat 31952360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 18527 - 18459
Alignment:
Q  218 tagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    ||||||||||| |||||||||| | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  18527 tagggatattgcatattatatacaggggccggggttcgaaccccggacaccccacttctccacaattaa 18459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 10885 - 10806
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccccatttctccacatttaa 286  Q
    |||| |||| |||||||||||| |||||||||  | |||  |||||||||||  ||||||||||| ||||||||| ||||    
T  10885 agctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 10806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 13262 - 13200
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaacttcggacaccc 269  Q
    |||| |||| |||||||||||| |||||||||  | ||||||||||||||||  |||||||||    
T  13262 agctcagttggtagggatattgcatattatatgcaggggttggggttcgaaccccggacaccc 13200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 65846 - 65796
Alignment:
Q  207 agcttagttagtagggatattgtatattatatataagggttggggttcgaa 257  Q
    |||| |||| |||||||||||| ||||||||| || |||||||||||||||    
T  65846 agctcagttggtagggatattgcatattatatgtaggggttggggttcgaa 65796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 62745 - 62785
Alignment:
Q  231 tattatatataagggttggggttcgaacttcggacacccca 271  Q
    ||||||||||| |||||||||||||||| ||||||| ||||    
T  62745 tattatatataggggttggggttcgaacatcggacaaccca 62785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1359 times since January 2019
Visitors: 3669