View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0552_high_46 (Length: 252)

Name: NF0552_high_46
Description: NF0552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0552_high_46
NF0552_high_46
[»] chr7 (46 HSPs)
chr7 (30-252)||(33601960-33602184)
chr7 (33-187)||(33601346-33601500)
chr7 (36-187)||(17944282-17944434)
chr7 (33-186)||(27863661-27863815)
chr7 (33-187)||(48470023-48470178)
chr7 (33-187)||(19302499-19302650)
chr7 (33-184)||(420342-420494)
chr7 (33-157)||(11619094-11619218)
chr7 (77-187)||(30570911-30571022)
chr7 (77-187)||(39967899-39968010)
chr7 (36-187)||(19022524-19022676)
chr7 (33-184)||(34744010-34744162)
chr7 (62-153)||(38499878-38499969)
chr7 (56-157)||(21568454-21568555)
chr7 (33-153)||(36517593-36517711)
chr7 (33-125)||(5947283-5947375)
chr7 (93-187)||(48507701-48507797)
chr7 (109-187)||(46280284-46280363)
chr7 (83-157)||(39629943-39630017)
chr7 (44-188)||(45593505-45593651)
chr7 (38-166)||(19214347-19214476)
chr7 (40-139)||(3927953-3928052)
chr7 (33-187)||(20526425-20526580)
chr7 (92-187)||(45338428-45338523)
chr7 (38-187)||(33678759-33678909)
chr7 (86-147)||(20428494-20428555)
chr7 (77-153)||(5947198-5947274)
chr7 (77-157)||(28614443-28614523)
chr7 (33-153)||(34035931-34036051)
chr7 (51-188)||(3308205-3308344)
chr7 (93-183)||(38138475-38138566)
chr7 (33-187)||(39907782-39907935)
chr7 (128-185)||(4970824-4970882)
chr7 (92-169)||(28341052-28341129)
chr7 (202-245)||(33602268-33602313)
chr7 (83-139)||(28900903-28900960)
chr7 (33-118)||(34464157-34464242)
chr7 (79-187)||(39279941-39280050)
chr7 (49-153)||(44989629-44989734)
chr7 (39-157)||(45790372-45790485)
chr7 (128-187)||(7467588-7467648)
chr7 (145-188)||(20234461-20234505)
chr7 (33-157)||(21196279-21196402)
chr7 (33-100)||(25670522-25670590)
chr7 (78-154)||(43250681-43250756)
chr7 (128-187)||(43694601-43694661)
[»] chr8 (36 HSPs)
chr8 (34-187)||(26771244-26771398)
chr8 (39-188)||(38648329-38648479)
chr8 (36-187)||(18133635-18133787)
chr8 (33-187)||(10758193-10758347)
chr8 (33-187)||(27028810-27028965)
chr8 (33-157)||(12976223-12976346)
chr8 (33-187)||(35534549-35534702)
chr8 (33-182)||(30251390-30251540)
chr8 (33-153)||(31716163-31716283)
chr8 (37-140)||(35643928-35644031)
chr8 (36-155)||(43045664-43045783)
chr8 (33-147)||(1058013-1058126)
chr8 (77-188)||(25930533-25930646)
chr8 (32-153)||(35749505-35749626)
chr8 (77-134)||(8146362-8146419)
chr8 (37-118)||(28763417-28763498)
chr8 (32-187)||(42043290-42043436)
chr8 (50-185)||(6881908-6882044)
chr8 (33-117)||(36963290-36963374)
chr8 (38-153)||(1930049-1930164)
chr8 (77-140)||(10120783-10120846)
chr8 (33-187)||(15180520-15180673)
chr8 (77-187)||(16825518-16825628)
chr8 (55-185)||(29168015-29168146)
chr8 (77-187)||(29205787-29205897)
chr8 (33-112)||(41589641-41589720)
chr8 (77-187)||(37945576-37945686)
chr8 (33-111)||(40859719-40859796)
chr8 (33-153)||(43717870-43717993)
chr8 (33-125)||(32840922-32841014)
chr8 (79-157)||(16347200-16347279)
chr8 (33-67)||(9130255-9130289)
chr8 (77-166)||(9956794-9956884)
chr8 (77-184)||(10114471-10114579)
chr8 (77-125)||(10383927-10383974)
chr8 (128-179)||(11861791-11861843)
[»] chr4 (41 HSPs)
chr4 (33-187)||(17822801-17822956)
chr4 (33-182)||(21731592-21731742)
chr4 (33-157)||(54426053-54426177)
chr4 (43-187)||(50681035-50681180)
chr4 (49-157)||(30668320-30668426)
chr4 (39-176)||(50662680-50662818)
chr4 (33-157)||(26801-26924)
chr4 (36-151)||(13126515-13126630)
chr4 (33-179)||(22030190-22030337)
chr4 (37-187)||(53294054-53294205)
chr4 (77-158)||(29657393-29657474)
chr4 (36-153)||(55302263-55302380)
chr4 (39-151)||(24169279-24169391)
chr4 (39-182)||(2244032-2244179)
chr4 (33-154)||(25904159-25904280)
chr4 (83-179)||(55414406-55414503)
chr4 (80-185)||(7839344-7839450)
chr4 (33-157)||(39603107-39603230)
chr4 (33-183)||(35571567-35571718)
chr4 (77-179)||(46588053-46588157)
chr4 (36-125)||(49939890-49939979)
chr4 (33-120)||(15173239-15173326)
chr4 (107-181)||(16199991-16200066)
chr4 (51-187)||(25332753-25332891)
chr4 (33-102)||(437100-437169)
chr4 (88-184)||(41512633-41512730)
chr4 (92-157)||(46592204-46592269)
chr4 (33-153)||(1706636-1706756)
chr4 (80-140)||(21523585-21523644)
chr4 (77-125)||(41336802-41336850)
chr4 (33-100)||(52172791-52172859)
chr4 (79-185)||(2996554-2996660)
chr4 (84-153)||(1407970-1408040)
chr4 (77-187)||(37863935-37864043)
chr4 (77-147)||(55064855-55064925)
chr4 (83-187)||(54069403-54069508)
chr4 (128-187)||(15177233-15177293)
chr4 (77-141)||(20109611-20109675)
chr4 (33-137)||(23459658-23459761)
chr4 (77-125)||(43886112-43886159)
chr4 (77-125)||(56249566-56249613)
[»] chr5 (44 HSPs)
chr5 (33-187)||(16937819-16937974)
chr5 (53-187)||(16457935-16458070)
chr5 (33-188)||(10639931-10640087)
chr5 (33-187)||(39105443-39105599)
chr5 (33-179)||(43300865-43301012)
chr5 (33-153)||(9202684-9202804)
chr5 (37-187)||(29925820-29925970)
chr5 (33-186)||(40426745-40426899)
chr5 (33-118)||(31038333-31038418)
chr5 (33-118)||(31047557-31047642)
chr5 (33-153)||(7705934-7706054)
chr5 (33-153)||(7984983-7985103)
chr5 (33-157)||(12857274-12857398)
chr5 (77-157)||(12857685-12857765)
chr5 (38-154)||(42500184-42500298)
chr5 (52-184)||(32009674-32009808)
chr5 (77-141)||(3735138-3735202)
chr5 (33-152)||(35445780-35445898)
chr5 (40-153)||(19460330-19460442)
chr5 (80-157)||(37954696-37954773)
chr5 (33-153)||(15246847-15246967)
chr5 (77-168)||(1465000-1465091)
chr5 (89-183)||(25461074-25461169)
chr5 (33-166)||(11700163-11700296)
chr5 (77-187)||(2568636-2568747)
chr5 (33-157)||(9107100-9107224)
chr5 (33-69)||(22209760-22209796)
chr5 (77-140)||(34669709-34669773)
chr5 (84-140)||(35446082-35446138)
chr5 (34-125)||(36797032-36797124)
chr5 (33-112)||(3520632-3520711)
chr5 (33-140)||(3932612-3932719)
chr5 (99-153)||(4014426-4014480)
chr5 (83-157)||(39477893-39477967)
chr5 (77-110)||(2973524-2973557)
chr5 (78-153)||(3280696-3280771)
chr5 (33-112)||(6096602-6096681)
chr5 (102-166)||(13697764-13697828)
chr5 (36-152)||(29845375-29845489)
chr5 (80-140)||(32859703-32859762)
chr5 (80-140)||(32861875-32861934)
chr5 (35-111)||(32942650-32942726)
chr5 (33-121)||(41419365-41419453)
chr5 (77-149)||(42646685-42646757)
[»] chr3 (44 HSPs)
chr3 (33-179)||(18405767-18405914)
chr3 (33-187)||(39980708-39980863)
chr3 (33-187)||(20880455-20880610)
chr3 (33-187)||(30443872-30444027)
chr3 (40-188)||(53789406-53789553)
chr3 (33-157)||(24085274-24085398)
chr3 (33-187)||(584025-584180)
chr3 (33-187)||(21367646-21367801)
chr3 (33-120)||(31365124-31365211)
chr3 (77-187)||(36631031-36631142)
chr3 (33-153)||(3845499-3845618)
chr3 (33-153)||(46031004-46031124)
chr3 (81-187)||(402526-402633)
chr3 (74-157)||(901934-902017)
chr3 (33-187)||(46778127-46778281)
chr3 (33-153)||(34610742-34610862)
chr3 (77-187)||(20170502-20170613)
chr3 (39-187)||(20257514-20257664)
chr3 (35-167)||(22203429-22203561)
chr3 (33-187)||(31365245-31365391)
chr3 (95-187)||(35959454-35959547)
chr3 (34-125)||(49556900-49556997)
chr3 (89-169)||(46478684-46478767)
chr3 (33-187)||(13715508-13715665)
chr3 (40-107)||(34034158-34034225)
chr3 (107-188)||(47132309-47132391)
chr3 (77-185)||(37689212-37689319)
chr3 (84-187)||(4401026-4401127)
chr3 (33-153)||(39602147-39602266)
chr3 (120-187)||(44061046-44061114)
chr3 (77-153)||(45541585-45541660)
chr3 (33-100)||(24684758-24684825)
chr3 (83-154)||(28795839-28795910)
chr3 (39-154)||(37389196-37389311)
chr3 (33-187)||(46886628-46886783)
chr3 (33-120)||(51929293-51929380)
chr3 (35-153)||(466207-466325)
chr3 (33-139)||(9832691-9832797)
chr3 (130-187)||(30956659-30956717)
chr3 (130-187)||(30972471-30972529)
chr3 (115-153)||(33883768-33883806)
chr3 (74-138)||(944591-944655)
chr3 (81-125)||(26911627-26911671)
chr3 (33-88)||(47132397-47132450)
[»] chr2 (52 HSPs)
chr2 (33-187)||(41851514-41851669)
chr2 (33-187)||(15757594-15757750)
chr2 (36-185)||(43279466-43279616)
chr2 (33-187)||(45229491-45229645)
chr2 (36-187)||(18066107-18066259)
chr2 (33-169)||(26202025-26202162)
chr2 (33-179)||(20952342-20952489)
chr2 (33-187)||(39659445-39659600)
chr2 (75-149)||(33981140-33981214)
chr2 (77-187)||(41812072-41812181)
chr2 (33-137)||(449877-449981)
chr2 (36-187)||(32592566-32592717)
chr2 (33-187)||(1625879-1626034)
chr2 (33-187)||(41241069-41241223)
chr2 (33-158)||(750679-750804)
chr2 (40-187)||(12464416-12464564)
chr2 (33-125)||(19608569-19608661)
chr2 (45-153)||(41293111-41293219)
chr2 (50-157)||(7035520-7035627)
chr2 (80-184)||(5745768-5745873)
chr2 (33-173)||(9174808-9174949)
chr2 (33-187)||(33319752-33319903)
chr2 (33-153)||(4606939-4607059)
chr2 (33-141)||(13325596-13325704)
chr2 (33-97)||(27317449-27317513)
chr2 (36-112)||(30331806-30331882)
chr2 (33-156)||(10619156-10619279)
chr2 (33-100)||(42659147-42659214)
chr2 (33-147)||(31561678-31561792)
chr2 (33-107)||(42419853-42419927)
chr2 (33-149)||(7928234-7928351)
chr2 (93-154)||(20926516-20926577)
chr2 (79-187)||(40279176-40279285)
chr2 (33-150)||(43036574-43036690)
chr2 (33-179)||(2142640-2142788)
chr2 (33-140)||(15305701-15305808)
chr2 (77-152)||(16451133-16451208)
chr2 (77-187)||(26626852-26626963)
chr2 (77-160)||(33192209-33192291)
chr2 (85-139)||(2227194-2227248)
chr2 (39-153)||(42457962-42458076)
chr2 (77-135)||(43570446-43570503)
chr2 (77-154)||(1647249-1647325)
chr2 (85-188)||(12289774-12289879)
chr2 (39-152)||(23974435-23974547)
chr2 (33-153)||(26143578-26143696)
chr2 (33-154)||(36534781-36534902)
chr2 (33-118)||(38916245-38916330)
chr2 (33-101)||(7033238-7033306)
chr2 (75-147)||(36043924-36043996)
chr2 (92-187)||(39073684-39073780)
chr2 (77-187)||(41407280-41407392)
[»] chr1 (56 HSPs)
chr1 (33-157)||(2295106-2295230)
chr1 (47-179)||(49938734-49938867)
chr1 (33-187)||(3233951-3234106)
chr1 (37-187)||(13809977-13810128)
chr1 (33-187)||(14576590-14576744)
chr1 (33-157)||(29904761-29904885)
chr1 (77-154)||(15477578-15477655)
chr1 (52-187)||(17603339-17603475)
chr1 (80-187)||(24915034-24915142)
chr1 (74-186)||(37631536-37631649)
chr1 (33-187)||(6556950-6557106)
chr1 (46-188)||(27970243-27970387)
chr1 (45-187)||(27976574-27976725)
chr1 (77-187)||(30286499-30286611)
chr1 (33-187)||(473143-473297)
chr1 (36-184)||(2777874-2778022)
chr1 (33-169)||(43230708-43230843)
chr1 (89-186)||(51688685-51688782)
chr1 (33-157)||(5720935-5721059)
chr1 (82-185)||(51929524-51929628)
chr1 (77-152)||(37473418-37473493)
chr1 (33-120)||(42575405-42575492)
chr1 (33-157)||(5741616-5741740)
chr1 (33-187)||(41195132-41195284)
chr1 (89-180)||(42174841-42174933)
chr1 (50-182)||(36872716-36872845)
chr1 (33-120)||(37517102-37517189)
chr1 (33-124)||(38001639-38001729)
chr1 (77-187)||(41184630-41184741)
chr1 (56-154)||(27820156-27820253)
chr1 (37-147)||(38018304-38018414)
chr1 (33-157)||(27146191-27146315)
chr1 (90-186)||(27820330-27820427)
chr1 (77-150)||(38503445-38503518)
chr1 (77-179)||(40977383-40977487)
chr1 (102-187)||(47432075-47432160)
chr1 (33-184)||(1432497-1432649)
chr1 (77-153)||(7136979-7137054)
chr1 (36-179)||(14331970-14332112)
chr1 (33-85)||(14385729-14385781)
chr1 (47-154)||(33186318-33186426)
chr1 (77-168)||(37842336-37842427)
chr1 (33-97)||(38247397-38247461)
chr1 (33-112)||(37617401-37617480)
chr1 (131-185)||(39596578-39596633)
chr1 (36-111)||(52863290-52863365)
chr1 (115-184)||(49888749-49888819)
chr1 (80-133)||(36872299-36872352)
chr1 (77-157)||(3887612-3887692)
chr1 (36-132)||(7119877-7119972)
chr1 (77-153)||(10199389-10199464)
chr1 (77-153)||(10744315-10744390)
chr1 (33-85)||(33204330-33204382)
chr1 (33-152)||(38116013-38116133)
chr1 (81-153)||(45975704-45975776)
chr1 (77-153)||(51695475-51695551)
[»] chr6 (25 HSPs)
chr6 (37-153)||(31813175-31813291)
chr6 (83-185)||(34430447-34430550)
chr6 (83-153)||(9763574-9763644)
chr6 (43-184)||(20368127-20368268)
chr6 (38-175)||(24982696-24982834)
chr6 (33-134)||(848022-848122)
chr6 (79-187)||(9093538-9093647)
chr6 (33-105)||(4163215-4163287)
chr6 (33-105)||(4224836-4224908)
chr6 (77-187)||(2735048-2735159)
chr6 (102-184)||(6536597-6536680)
chr6 (117-187)||(6909892-6909963)
chr6 (37-140)||(9912131-9912234)
chr6 (32-187)||(24626274-24626422)
chr6 (33-108)||(30926578-30926653)
chr6 (77-155)||(35070630-35070708)
chr6 (51-184)||(35099019-35099152)
chr6 (32-112)||(9559357-9559437)
chr6 (80-187)||(18076175-18076290)
chr6 (36-100)||(30536570-30536634)
chr6 (77-149)||(31624108-31624179)
chr6 (39-125)||(19411491-19411577)
chr6 (115-187)||(837234-837307)
chr6 (33-167)||(13907584-13907717)
chr6 (33-100)||(33089572-33089640)
[»] scaffold0221 (1 HSPs)
scaffold0221 (36-153)||(22245-22362)
[»] scaffold0528 (1 HSPs)
scaffold0528 (33-118)||(918-1003)
[»] scaffold0050 (1 HSPs)
scaffold0050 (53-153)||(58756-58856)
[»] scaffold0057 (1 HSPs)
scaffold0057 (33-100)||(24688-24755)


Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 33601960 - 33602184
Alignment:
Q  30 agattgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaatt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601960 agattgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaatt 33602059  T
Q  130 cataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaatacnnnnnnnctataacgaaattg--ctgttacgttgatttt 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||  ||||||||||||||||    
T  33602060 cataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaatacaaaaaaactataacgaaattgctctgttacgttgatttt 33602159  T
Q  228 caagatccaaaactacaaaatgaaa 252  Q
    | |||||||||||||||||||||||    
T  33602160 ccagatccaaaactacaaaatgaaa 33602184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 33601346 - 33601500
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33601346 ttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaattcat 33601445  T
Q  133 aagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  33601446 aagttctctaagatagcttataaaacaacttatagcaaatacaaaaataatttaa 33601500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 187
Target Start/End: Original strand, 17944282 - 17944434
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||||||||||||||||| ||| ||||||| |||  || ||||||| ||||||||||||||||||||||||| || ||||||||||||| |||||||     
T  17944282 agcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgacacttttcatatgcttttttcagcttaatttcataaa 17944381  T
Q  136 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    || || |||||| ||||| ||||| ||||| | || |||||||||||||||||    
T  17944382 ttatccaagataacttatgaaaacaacttacaacatatacaaaaacaatttaa 17944434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 186
Target Start/End: Original strand, 27863661 - 27863815
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||| ||||||||||||||| ||||||| |||  || ||||||||||||||||||  || | |||||| || | ||||||||||||  |||||    
T  27863661 ttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagcttgagaaaattttcaaaaacttttttcagcttatgttcat 27863760  T
Q  133 aagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaattta 186  Q
    ||||||||||| |||| ||| |||||| |||||||||| ||||||| | ||||||    
T  27863761 aagttctctaatatagtttattaaaacaacttatagcatatacaaataaaattta 27863815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 48470178 - 48470023
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||  | |||||||||||||||| | |||  || ||||||||||||||||||||| || ||||||||||| ||||| ||||||  |||||    
T  48470178 ttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagcttatgttcat 48470079  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| |  || ||||||||| ||||| |||||||  | |||||||||||||||||    
T  48470078 aagttattcaaaatagcttatgaaaacaacttatattatatacaaaaacaatttaa 48470023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 19302499 - 19302650
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||||||||| ||||| | |||  || || ||||||||||||||||||||| ||||||||| | ||||||| ||||  |||||    
T  19302499 ttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaacttttttcaacttattttcat 19302598  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||     ||||||||| ||||| ||||||| || |||||||||||||||||    
T  19302599 aagttct----tatagcttataaaaacaacttataacatatacaaaaacaatttaa 19302650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 420494 - 420342
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||| ||||||||| |||| ||| ||||||| |||  || ||||||||||||||  |||||||| |||||  |||||||||||| ||||  |||||    
T  420494 ttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttcaacttattttcat 420395  T
Q  133 aagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaatt 184  Q
    |||||||| || ||||||||   |||| |||||||||| ||||||||||||||    
T  420394 aagttctccaatatagcttacggaaacaacttatagcatatacaaaaacaatt 420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 11619094 - 11619218
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||||| || |||| ||   ||  || || ||||||||||| ||||||||| ||||||||||| ||||||| ||||| |||||    
T  11619094 ttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttcataagcttttttcaacttaatttcat 11619193  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    |||||||| ||  ||||||||||||    
T  11619194 aagttctccaacgtagcttataaaa 11619218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 30570911 - 30571022
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaataca 175  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||  |||| ||||||||||||| ||  ||| ||||||||  | ||||||||| |||||    
T  30570911 aacttgtgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaatagcttatagcatataca 30571010  T
Q  176 aaaacaatttaa 187  Q
    |||| |||||||    
T  30571011 aaaataatttaa 30571022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 39968010 - 39967899
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 175  Q
    ||||||||||||||||||||| || | |||||||||  |||||| ||||  ||||| |||||||| ||||||||||| ||||| ||||||||| | |||     
T  39968010 aacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagctagtacg 39967911  T
Q  176 aaaacaatttaa 187  Q
    ||||||||||||    
T  39967910 aaaacaatttaa 39967899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 187
Target Start/End: Original strand, 19022524 - 19022676
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    ||||||||||||| ||| |||||| ||||| | |||  || || ||||||||||| ||||||||| ||||||||||   | |||| ||||  ||||||||    
T  19022524 agcttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataag 19022623  T
Q  136 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| || ||||||||| ||||| ||||||||||  ||  ||||||||||||    
T  19022624 ttctccaatatagcttataaaaacaacttatagcatttattaaaacaatttaa 19022676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 34744162 - 34744010
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||  |||||| ||| ||||||| |||   | |||| ||||||| | ||||||||| |||||| |||| ||||||  ||||  || ||    
T  34744162 ttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttcacaagcttttttcgccttatttttat 34744063  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 184  Q
    |||||||| || ||||||||| ||||| ||||||| || ||||||||||||||    
T  34744062 aagttctccaatatagcttatgaaaacaacttataccatatacaaaaacaatt 34744010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 38499878 - 38499969
Alignment:
Q  62 gagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    ||||||||||  || ||||| | |||||||||||||||| ||||||||||| |||| |||||||  ||||||||||||| ||||| ||||||    
T  38499878 gagactctttgggagaacttttcaaaacagcttatgacatttttcataagctttttccagcttattttcataagttctccaagattgcttat 38499969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 21568454 - 21568555
Alignment:
Q  56 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataa 155  Q
    |||| ||||||| |||  || |||||||||||||||||||| ||| |||||||||||  |||||| ||||  | ||||||||||| || |||||||||||    
T  21568454 ttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataa 21568553  T
Q  156 aa 157  Q
    ||    
T  21568554 aa 21568555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 36517711 - 36517593
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||| ||||||||||||||||| | ||||| |||  || ||||||| |||||||||  ||||| | |||||||||  ||||||| |||  |||||    
T  36517711 ttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagct--tgacattgttcataagctattttcagtttattttcat 36517614  T
Q  133 aagttctctaagatagcttat 153  Q
    || ||||| ||||||||||||    
T  36517613 aatttctccaagatagcttat 36517593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 5947375 - 5947283
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    ||||||||||||| ||| ||||||||||||||||| |||   | ||||| ||||| |||||||||||| |||||||| || |||| |||||||    
T  5947375 ttgagcttatctattggtataagttttatgagactgtttggaagaacttttgaaaccagcttatgacatttttcatatgctttttacagctta 5947283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 48507797 - 48507701
Alignment:
Q  93 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaa-gatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| |||| |||||  ||||||||||||| |||||||||||||||| ||| |||||| |||||   |||||||| |||||||||||||||||    
T  48507797 ttatgacattttttataagtatttttcagcttaatttcataagttctctaaggatggcttatgaaaacagtttatagcatatacaaaaacaatttaa 48507701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 46280284 - 46280363
Alignment:
Q  109 aagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 187  Q
    |||| ||||||||| ||  ||||||||||||| || ||||||||||||| || ||||||||| |||||||||||||||||    
T  46280284 aagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatatacaaaaacaatttaa 46280363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 39629943 - 39630017
Alignment:
Q  83 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| | |||||||||||  || |||||||| ||||    
T  39629943 tgaaaacagcttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagcttaaaaaa 39630017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 45593651 - 45593505
Alignment:
Q  44 tactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt-cagcttaaattcataagttctcta 142  Q
    ||||| |||||| ||| ||||||| |||  || ||||||| |||||| || |||||| ||||||||||| ||||| ||| |||  ||| ||||||||| |    
T  45593651 tactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatgacatttttcataagcttttttccagtttattttcgtaagttctcca 45593552  T
Q  143 agatagcttataaaacca-cttatagcaaatacaaaaacaatttaat 188  Q
    |||||||||| ||||  | ||||||||| |||||||||  |||||||    
T  45593551 agatagcttagaaaaatagcttatagcatatacaaaaaatatttaat 45593505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 166
Target Start/End: Original strand, 19214347 - 19214476
Alignment:
Q  38 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 137  Q
    |||||||||  ||||||||||| ||||| | |||  || ||||||||||||||||  |||||| ||||||||| | | ||||| ||||  ||||||||||    
T  19214347 cttatctacatgcataagttttgtgagattgtttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagtt 19214446  T
Q  138 ctctaagatagcttata-aaaccacttata 166  Q
    ||  || |||||||||| |||| |||||||    
T  19214447 ctacaatatagcttatacaaacaacttata 19214476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 3927953 - 3928052
Alignment:
Q  40 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 139  Q
    |||||||| ||||||||||| ||||||| |||  || || || | ||||||  |||||||| ||||||||||| ||||||| ||||  ||||||||||||    
T  3927953 tatctactagcataagttttgtgagactatttgagagaattttttaaaacaatttatgacaattttcataagcttttttcaacttattttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 20526580 - 20526425
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||||| ||| | || |||| ||||||| |||  || ||||||||||||||| |||| ||| ||||| |||||  |||| ||||||  |||||    
T  20526580 ttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagcttattttcat 20526481  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
     ||||||| || ||||||||| |||||  |||||||||  |||||| | |||||||    
T  20526480 tagttctccaaaatagcttatgaaaacagcttatagcatgtacaaacataatttaa 20526425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 45338523 - 45338428
Alignment:
Q  92 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||| |||| || ||  ||||||| ||||  ||||| ||||||| || |||||||| ||||| ||||| |||| |||||||||||||||||    
T  45338523 cttatgacaatttttattagtttttttcaacttattttcatcagttctccaatatagcttaaaaaacaacttacagcatatacaaaaacaatttaa 45338428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 33678909 - 33678759
Alignment:
Q  38 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 137  Q
    |||||||||| ||||||||||| ||||||  |||  || |||||||||||||| ||||| ||| | ||||| ||   |||||| ||||  |||| |||||    
T  33678909 cttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttcaacttattttcacaagtt 33678810  T
Q  138 ctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
     || |||||||||||| |||||  ||||||||   ||||||||| ||||||    
T  33678809 ttccaagatagcttatgaaaacagcttatagcttttacaaaaaccatttaa 33678759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 20428555 - 20428494
Alignment:
Q  86 aaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 147  Q
    ||||||||||||||| || |||||||| ||||||||||||  ||| ||||||| ||||||||    
T  20428555 aaacagcttatgacagttctcataagcttttttcagcttattttcgtaagttccctaagata 20428494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 5947274 - 5947198
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    ||||| ||||| ||||||||| || |||||||||||  |||||||||||  ||||||| |||||  |||||||||||    
T  5947274 aacttttgaaaccagcttatggcatttttcataagctcttttcagcttattttcataacttctcctagatagcttat 5947198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 28614523 - 28614443
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    |||||||||||||| | ||| ||| |||||| |||| |||||||| |||| ||||||||||||| || | ||||| |||||    
T  28614523 aacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaa 28614443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 34036051 - 34035931
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||| || || |||||||  ||   | |||||||||||| | ||||||||| | ||||||||   |||||| ||||  |||      
T  34036051 ttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgc 34035952  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||||||||||||||||||    
T  34035951 aagttctctaagatagcttat 34035931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 3308205 - 3308344
Alignment:
Q  51 ataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttt-tcataagcctttttcagcttaaattcataagttctctaagatagc 149  Q
    |||||||||||| |||| |||  || ||||| |||||| |||||||| || ||| |||||||| ||||||||||||  || |||||||||| || ||| |    
T  3308205 ataagttttatgtgactgtttgggagaacttttgaaaatagcttatgccattttctcataagcttttttcagcttattttaataagttctcaaacataac 3308304  T
Q  150 ttat-aaaaccacttatagcaaatacaaaaacaatttaat 188  Q
    || | ||||   ||||||||| ||| | ||||||||||||    
T  3308305 ttctgaaaatatcttatagcatataaataaacaatttaat 3308344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 38138475 - 38138566
Alignment:
Q  93 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 183  Q
    |||||||| ||||||||||| ||||||| ||||  |||||||||||   || |||||| || ||||| |||||||||| |||||||| ||||    
T  38138475 ttatgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaat 38138566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 39907935 - 39907782
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| ||| || ||||||||| ||||||| |||  || ||||| | |||  |||||||| || | ||||| |||  |||||||||||  |||||    
T  39907935 ttgagcttatatacagggataagttttgtgagactgtttgagagaacttgtaaaatgagcttatg-ca-tgttcattagctgttttcagcttattttcat 39907838  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
     ||||||||||||||| |||| |||||   |||||||  |||||||||||||||||    
T  39907837 tagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaa 39907782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 4970824 - 4970882
Alignment:
Q  128 ttcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaattt 185  Q
    |||||||||||||||| ||| ||||| ||||  |||||||||| |||||||||||||||    
T  4970824 ttcataagttctctaatatatcttataaaaagaacttatagcatatacaaaaacaattt 4970882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 28341052 - 28341129
Alignment:
Q  92 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagca 169  Q
    ||||||||| |||||| |||| |||| |||||||  |||||||||||||||| |||| ||||| |||| ||||||||||    
T  28341052 cttatgacaattttcaaaagctttttccagcttat-ttcataagttctctaatatagtttatacaaacaacttatagca 28341129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 33602268 - 33602313
Alignment:
Q  202 aacgaaattgct--gttacgttgattttcaagatccaaaactacaa 245  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||    
T  33602268 aacgaaattgctctgttacgttgattttccagatccaaaactacaa 33602313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 28900960 - 28900903
Alignment:
Q  83 tgaaaacagcttatgacacttt-tcataagcctttttcagcttaaattcataagttct 139  Q
    |||||||||||||||||| ||| || |||| |||||||||||||  ||||||||||||    
T  28900960 tgaaaacagcttatgacattttctcgtaaggctttttcagcttattttcataagttct 28900903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 34464157 - 34464242
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 118  Q
    ||||| ||||||| || ||||| |||||  ||||| |||  ||  ||||||||||||||||||||||| |||||| |||| |||||    
T  34464157 ttgagtttatctattgacataaattttacaagactttttgggaggacttatgaaaacagcttatgacaattttcacaagctttttt 34464242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 39280050 - 39279941
Alignment:
Q  79 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaa 177  Q
    ||||| ||||||||||||  || ||| ||||||| ||||||||||||  |||| |||||||| ||||||  |||| ||| || | |||| || ||||| |    
T  39280050 cttataaaaacagcttatagcattttacataagcttttttcagcttattttcaaaagttctccaagataatttatgaaatcagcctataacatatacaca 39279951  T
Q  178 aacaatttaa 187  Q
    ||||||||||    
T  39279950 aacaatttaa 39279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 44989629 - 44989734
Alignment:
Q  49 gcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc-ctttttcagcttaaattcataagttctctaagata 147  Q
    ||||||||||| ||||||| |||  ||||||||||||||||| ||| ||||| | |||| ||||  |||| |||||||  ||||||| ||||  ||||||    
T  44989629 gcataagttttgtgagactgtttgggaaaacttatgaaaacaacttctgacattgttcacaagctgttttgcagcttattttcataatttctacaagata 44989728  T
Q  148 gcttat 153  Q
     |||||    
T  44989729 tcttat 44989734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 45790372 - 45790485
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    ||||||| || |||||||||||||||    |||  || |||||||||||| | ||||||||| |||| | |||| ||||||||||||  ||||||||||     
T  45790372 ttatctattgacataagttttatgag----tttcggagaacttatgaaaataacttatgacaatttttaaaagc-tttttcagcttattttcataagtta 45790466  T
Q  139 tctaagatagcttataaaa 157  Q
    || || |||| ||||||||    
T  45790467 tccaatatagtttataaaa 45790485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 7467648 - 7467588
Alignment:
Q  128 ttcataagttctctaagatagcttataaaaccacttatagcaaatac-aaaaacaatttaa 187  Q
    ||||||||||| |||||||| ||| | ||| ||||||||||| |||| |||||||||||||    
T  7467648 ttcataagttcactaagataacttctgaaatcacttatagcatatacaaaaaacaatttaa 7467588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 20234505 - 20234461
Alignment:
Q  145 atagctta-taaaaccacttatagcaaatacaaaaacaatttaat 188  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||    
T  20234505 atagcttagtaaaacaacttatagcaattacaaaaacaatttaat 20234461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 21196402 - 21196279
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| |||| ||||||||||| ||||||| |||   | || ||||| ||||||| ||||||| |||||||| || ||||| | ||||  ||| |    
T  21196402 ttgagcttatatactagcataagttttgtgagactgtttagaagaatttatgcaaacagc-tatgacaattttcatatgctttttttaacttattttctt 21196304  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    |||||||  || | |||||||||||    
T  21196303 aagttctgcaataaagcttataaaa 21196279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 25670522 - 25670590
Alignment:
Q  33 ttgagcttatctactggcataagtt-ttatgagactcttttcgaaaacttatgaaaacagcttatgaca 100  Q
    ||||||||||||| || |||||| | || ||||||| |||  ||||||||||||||||| |||||||||    
T  25670522 ttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgaca 25670590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 43250681 - 43250756
Alignment:
Q  78 acttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 154  Q
    ||||||||||||||||||||||| | ||| ||||   ||||||| ||| ||||||||| |||| || ||||||||||    
T  43250681 acttatgaaaacagcttatgaca-tgttcgtaagttgttttcagtttatattcataagctctccaaaatagcttata 43250756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 43694601 - 43694661
Alignment:
Q  128 ttcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||||||   | ||||||||||||| || ||||||||| |||||||||||||||||    
T  43694601 ttcataagttcttcgatatagcttataaaaacagcttatagcatatacaaaaacaatttaa 43694661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 187
Target Start/End: Complemental strand, 26771398 - 26771244
Alignment:
Q  34 tgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcata 133  Q
    ||||||||||||| |||||||||||| ||||||| |||  || |||||||||||||||||||||||| |||||| |||||||||||| ||||  ||||||    
T  26771398 tgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcata 26771299  T
Q  134 agttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 187  Q
    |||||||||| ||| |||||||||  | ||||||||| |||||||||||||||||    
T  26771298 agttctctaatatatcttataaaaaaagcttatagcatatacaaaaacaatttaa 26771244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 38648479 - 38648329
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    |||||||||| |||||||||| ||||||| |||  || | ||||||||||||||| |||||| || |||||||| ||||| ||| ||| |||||||||||    
T  38648479 ttatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataagcttttttaagcgtaatttcataagttc 38648380  T
Q  139 tctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaat 188  Q
    |  |||||||||||| ||||| ||| ||| || |||||||||||| |||||    
T  38648379 tacaagatagcttatgaaaacaactcataacatatacaaaaacaagttaat 38648329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 187
Target Start/End: Complemental strand, 18133787 - 18133635
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||||||||| | ||||||||| ||||||| |||  || | ||| ||||| |||||||| ||| |||||| |||| ||||||||||||  ||||||||    
T  18133787 agcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagcttattttcataag 18133688  T
Q  136 ttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 187  Q
    ||||| || |||| ||||||||||| ||||||| | |||||||| ||||||||    
T  18133687 ttctccaatatagtttataaaaccagcttataggatatacaaaagcaatttaa 18133635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 10758193 - 10758347
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||| ||||||| ||  |||||||||| ||||||| |||   | || ||||||||||||||||||||| |||||| |||| |||||||||||   |||||    
T  10758193 ttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaaagcttttttcagcttgttttcat 10758292  T
Q  133 aagttctctaagatagcttataaa-accacttatagcaaatacaaaaacaatttaa 187  Q
    |||||  |||| |||||||||||| || |||||||||| |||||||||||||||||    
T  10758293 aagtt-gctaatatagcttataaagacaacttatagcatatacaaaaacaatttaa 10758347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 27028965 - 27028810
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||| ||||||||||||||  ||||| | |||  || || || ||||||||||||| |||| |||||||||||  |||||||||||  |||||    
T  27028965 ttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagcttattttcat 27028866  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||| |||| |||||||||||| |||||  ||||||||| ||||| |||||||||||    
T  27028865 aagctctccaagatagcttatgaaaacagcttatagcatatacacaaacaatttaa 27028810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 12976346 - 12976223
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| ||||||| ||| ||||||| |||   | ||||||||| |||||||| | ||| |||||| |||| ||||||||||| | |||||    
T  12976346 ttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagcttttttcagctt-atttcat 12976248  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    ||||||||||| |||||||||||||    
T  12976247 aagttctctaatatagcttataaaa 12976223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 35534549 - 35534702
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||  |||||||||| ||||||| |||  || ||||| |||||||||||||||||| |||| | |||| |||||| |||||  |||||    
T  35534549 ttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggcttactttcat 35534648  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| || ||| ||||| ||||| || ||||  | |||||||||||||||||    
T  35534649 aagttctccaatataacttatgaaaacaacatata--acatacaaaaacaatttaa 35534702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 30251390 - 30251540
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||||||||  ||||||| |||  || |||||| |||||||||||||  || ||||||||||| |||| |||||||  |||||    
T  30251390 ttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataagctttttacagcttattttcat 30251489  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaa 182  Q
    ||||  || |||||||||||| |||||  |||||| || |||||| |||||    
T  30251490 aagtggtccaagatagcttatgaaaacagcttataacatatacaataacaa 30251540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 31716163 - 31716283
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| |||||||  |||| ||||||| |||  || ||||| |||||||||||||||||| | ||||||||| ||||||||||||  |  ||    
T  31716163 ttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttatttctat 31716262  T
Q  133 aagttctctaagatagcttat 153  Q
    || ||||| ||||||||||||    
T  31716263 aacttctccaagatagcttat 31716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 35643928 - 35644031
Alignment:
Q  37 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 136  Q
    |||||||||||||||||| |||| ||||||| |||  || |||||||||||| || |||||||| ||||||||||| ||||||| ||||  ||||||||     
T  35643928 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagc 35644027  T
Q  137 tctc 140  Q
    ||||    
T  35644028 tctc 35644031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 43045664 - 43045783
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||||||||| ||||||| ||| ||||||| |||| || | |||||||||||||||||  ||| |||| |||||| ||||||| ||||  ||||||||    
T  43045664 agcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagcttttttcaacttattttcataag 43045763  T
Q  136 ttctctaagatagcttataa 155  Q
    ||||| || |||| ||||||    
T  43045764 ttctccaatatagtttataa 43045783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 1058013 - 1058126
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||  |||||||||| ||||||| |||  || ||||| ||||||| |||||||||| ||||||| ||  |||||| |||||  |||||    
T  1058013 ttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattag-ttttttccgcttattttcat 1058111  T
Q  133 aagttctctaagata 147  Q
    |||||||| ||||||    
T  1058112 aagttctccaagata 1058126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 25930533 - 25930646
Alignment:
Q  77 aacttatgaaaacagctta-tgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatac 174  Q
    |||||||||||| | |||| ||||||||||| ||||| ||||||||||||   ||| |||||||| |||||||||||| ||||| | ||| |||| ||||    
T  25930533 aacttatgaaaaaatcttaatgacacttttcgtaagcttttttcagcttactatcacaagttctccaagatagcttatgaaaacaatttaaagcatatac 25930632  T
Q  175 aaaaacaatttaat 188  Q
    ||||||| ||||||    
T  25930633 aaaaacattttaat 25930646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 35749505 - 35749626
Alignment:
Q  32 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 131  Q
    |||||||||||||| || ||||||||||  ||| || |||  || |||||||||||||||||| |  || ||||||||| | ||||||| | ||  ||||    
T  35749505 attgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttcaacatattttca 35749604  T
Q  132 taagttctctaagatagcttat 153  Q
    |||||||| |||||||||||||    
T  35749605 taagttctttaagatagcttat 35749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 8146419 - 8146362
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataa 134  Q
    ||||||||||||||| |||||||||||||||||||  |||| |||||||| |||||||    
T  8146419 aacttatgaaaacagtttatgacacttttcataagttttttccagcttaatttcataa 8146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 28763498 - 28763417
Alignment:
Q  37 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 118  Q
    ||||||||| |  |||||||||| ||||||| |||  || |||||||||||||||||||| ||| ||||||||||| |||||    
T  28763498 gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttt 28763417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 42043290 - 42043436
Alignment:
Q  32 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 131  Q
    ||||||||||| ||||| |||||||||||||||||| ||   || ||| |||| ||||||||||||| | ||||||||          ||||||   |||    
T  42043290 attgagcttatttactgtcataagttttatgagactgttcgggagaacatatggaaacagcttatgatatttttcata----------agcttattgtca 42043379  T
Q  132 taagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    | |||||||||||||||||||| ||||| ||||||| || || ||||||||||||||    
T  42043380 ttagttctctaagatagcttatgaaaacaacttatatcatatccaaaaacaatttaa 42043436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 185
Target Start/End: Complemental strand, 6882044 - 6881908
Alignment:
Q  50 cataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca-gcttaaattcataagttctctaagatag 148  Q
    |||||||||| ||||||| |||  || ||| ||||||||||||| |||| | |||| | |||| |||||   |||||  ||||||||||||| ||  |||    
T  6882044 cataagttttgtgagactgtttgggagaacctatgaaaacagctcatgataattttaacaagctttttttttgcttattttcataagttctccaatttag 6881945  T
Q  149 cttataaaaccacttatagcaaatacaaaaacaattt 185  Q
    ||||||||||  ||||||||| ||| |||||||||||    
T  6881944 cttataaaacagcttatagcatatataaaaacaattt 6881908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 36963290 - 36963374
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttt 117  Q
    ||||||| ||||||||||||||||||| ||||||| |||  || ||||||  |||||||||| ||||| |||||| |||| ||||    
T  36963290 ttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaattttcaaaagcttttt 36963374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 1930164 - 1930049
Alignment:
Q  38 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 137  Q
    ||||||||||| |||||||||| ||| | | |||  || ||||| ||||||||| |||||||| | |||||||||  |||||||||||  |||| ||| |    
T  1930164 cttatctactgacataagttttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggt 1930065  T
Q  138 ctctaagatagcttat 153  Q
    | | ||||||||||||    
T  1930064 caccaagatagcttat 1930049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 10120846 - 10120783
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 140  Q
    |||||||||||||||||||||||| || ||||| ||  |||||||||||  |||||||||||||    
T  10120846 aacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctc 10120783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 15180673 - 15180520
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| |||||||||| |||||||||||||||||| |||| || || || ||||||||| || ||||| |||||  |||  ||||| | ||||  ||||     
T  15180673 ttgagtttatctactgccataagttttatgagact-ttttggagaatttctgaaaacaggttttgacaattttc-caagtttttttaaacttattttcag 15180576  T
Q  133 aagttctctaagatagcttata-aaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| || |||||||||| |||| ||||||| ||  |||||||| |||||||    
T  15180575 aagttctccaatatagcttatagaaacaacttataacatttacaaaaataatttaa 15180520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 16825518 - 16825628
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaataca 175  Q
    |||||||||||| ||||||||||| |||||||||| |||||||| ||||  |||||||||||   || ||||||| || |||| ||||||| |  | |||    
T  16825518 aacttatgaaaatagcttatgacaattttcataag-ctttttcaacttattttcataagttcggcaatatagcttgtagaaacaacttataacgtaaaca 16825616  T
Q  176 aaaacaatttaa 187  Q
    ||||||||||||    
T  16825617 aaaacaatttaa 16825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 29168015 - 29168146
Alignment:
Q  55 gttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-t 153  Q
    ||||| ||||||| |||  || ||||||| ||||||| |||||||| |||||||||   ||| ||||||||  | ||||||||||| ||||||||| |      
T  29168015 gttttgtgagactgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataagttctccaagatagctcagg 29168114  T
Q  154 aaaaccacttatagcaaatacaaaaacaattt 185  Q
    |||||  ||||||||| ||||||||| |||||    
T  29168115 aaaacagcttatagcatatacaaaaataattt 29168146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 29205897 - 29205787
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 175  Q
    ||||||| |||||||| ||||||| |||||||||| |||||| | | ||  ||||||| ||||| || |||| |||| ||||  |||||||||| |||||    
T  29205897 aacttattaaaacagcgtatgacatttttcataag-cttttttaacctactttcataaattctccaaaatagtttatgaaaataacttatagcatataca 29205799  T
Q  176 aaaacaatttaa 187  Q
    ||||||||||||    
T  29205798 aaaacaatttaa 29205787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 41589720 - 41589641
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 112  Q
    |||||||| ||||||| |||||| ||| ||||||| |||| || |||||||||||||| ||||| ||| |||||| ||||    
T  41589720 ttgagcttgtctactgacataagctttttgagactgttttggagaacttatgaaaacaacttataacaattttcaaaagc 41589641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 37945686 - 37945576
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 176  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||| | ||||  |||| ||||| |  || ||||||||||||| ||  ||||||| ||||||    
T  37945686 aacttctgaaaacagcttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaacaactatagcatatacaa 37945587  T
Q  177 aaacaatttaa 187  Q
    ||  |||||||    
T  37945586 aattaatttaa 37945576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 40859719 - 40859796
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataag 111  Q
    |||||||||||| ||  |||||||||| |||| || |||| || | |||||||||||||||||||||| ||||||||||    
T  40859719 ttgagcttatctgctaacataagttttgtgaggctgttttggaga-cttatgaaaacagcttatgacaattttcataag 40859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 43717870 - 43717993
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttat---gacacttttcataagcctttttcagcttaaatt 129  Q
    ||||||||||||| || |||||||||| ||||||| |||  || |||||||||||||||  |||   ||||    ||||||||  |||| ||||||  ||    
T  43717870 ttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacagactatgaggacatcgctcataagctgtttttagcttacttt 43717969  T
Q  130 cataagttctctaagatagcttat 153  Q
    ||||||||||| ||||||||||||    
T  43717970 cataagttctccaagatagcttat 43717993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 32840922 - 32841014
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    |||||||||||||||  || |||||||  |||||| |||  || |||||||||||||| ||||||||| | ||||||||   |||||||||||    
T  32840922 ttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagctta 32841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 16347279 - 16347200
Alignment:
Q  79 cttatgaaaacagctta-tgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    ||||||||||||  ||| ||||||||||||||||| || ||||||||||  ||||||||||   ||||||| ||||||||    
T  16347279 cttatgaaaacaagttaatgacacttttcataagctttattcagcttaatatcataagttcaacaagatagtttataaaa 16347200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 9130255 - 9130289
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagact 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  9130255 ttgagcttatctactggcataagttttgtgagact 9130289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 9956794 - 9956884
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttata 166  Q
    |||||||||||| || ||||| || | ||||||||   |||||||||||  ||||||||||||| ||||||| |||| ||||| |||||||    
T  9956794 aacttatgaaaatagtttatggcattgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttata 9956884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 10114579 - 10114471
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 175  Q
    |||||||||||||| ||||| ||| || ||||| ||  |||||||||||  |||||| |||||| || |||||| || |||||  ||||||||  ||||     
T  10114579 aacttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttatacc 10114480  T
Q  176 aaaacaatt 184  Q
    |||||||||    
T  10114479 aaaacaatt 10114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 10383974 - 10383927
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    |||||||||||||||||||||||| |||||||||||  ||| |||||||    
T  10383974 aacttatgaaaacagcttatgaca-ttttcataagctgtttacagctta 10383927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 11861843 - 11861791
Alignment:
Q  128 ttcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 179  Q
    |||||||||||||||  ||||||||| ||||| |||||||||| |||||||||    
T  11861843 ttcataagttctctattatagcttataaaaacaacttatagcatatacaaaaa 11861791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 17822801 - 17822956
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||||||| | ||||||| |||  || ||| |||||||||||||||||||| ||||||||||| ||||| ||||||  |||||    
T  17822801 ttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagctttttttagcttattttcat 17822900  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| |||||||||||| ||||| |||||||||| ||| || ||||||||||    
T  17822901 aagttctccaagatagcttatgaaaacaacttatagcatataaaataacaatttaa 17822956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 21731592 - 21731742
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||| ||||||||| |||||||||| ||||| | |||  || |||||||||||||||||||| ||| ||||||||| | ||||||| ||||  |||||    
T  21731592 ttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaacttttttcaacttactttcat 21731691  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaa 182  Q
    || ||||| || ||||||||| ||||| |||||||||| ||||||||||||    
T  21731692 aaattctccaatatagcttataaaaacaacttatagcacatacaaaaacaa 21731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 54426177 - 54426053
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||||||||||||||| |||||||  ||  || |||||| ||||||||||||||||| ||||||||||| |||||||  |||  |||||    
T  54426177 ttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagcttttttcaagttattttcat 54426078  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    |||||||| || |||| ||||||||    
T  54426077 aagttctccaatatagattataaaa 54426053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 50681035 - 50681180
Alignment:
Q  43 ctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctcta 142  Q
    ||||| || |||||||| ||||||| |||  || ||||||||||||||| | |||||| ||||||||||| |||||||  |||  ||||||| ||||| |    
T  50681035 ctactcgcttaagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctcca 50681134  T
Q  143 agatagcttata-aaaccacttatagcaaatacaaaaacaatttaa 187  Q
    | |||||||||| |||| |||||||||| |||||||||||||||||    
T  50681135 atatagcttatataaacaacttatagcatatacaaaaacaatttaa 50681180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 30668320 - 30668426
Alignment:
Q  49 gcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatag 148  Q
    ||||||||||| ||||||| |||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||  | || |||||||    
T  30668320 gcataagttttttgagact-ttttggagaacttgtgaaaacagcttatgacacttttcataag-ctttttcagcttaatttcataaactatccaagatag 30668417  T
Q  149 cttataaaa 157  Q
    |||||||||    
T  30668418 cttataaaa 30668426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 176
Target Start/End: Original strand, 50662680 - 50662818
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    ||||||||  || ||||||||||||||||||||  || ||||||||||||||| | |||||| ||||||||||| ||||||| ||||  |||| || |||    
T  50662680 ttatctacccgcttaagttttatgagactctttaagagaacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttcacaatttc 50662779  T
Q  139 tctaagatagcttata-aaaccacttatagcaaatacaa 176  Q
    || || |||||||||| |||| |||||||||| ||||||    
T  50662780 tccaatatagcttatataaacaacttatagcatatacaa 50662818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 26801 - 26924
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||| ||||||||||| ||| | ||||| ||| ||| || |||||||||||||||||||||  ||||| ||| ||||||||| |||  |||||    
T  26801 ttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaag-ctttttcagattattttcat 26899  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    |||||||| || |||||||||||||    
T  26900 aagttctccaatatagcttataaaa 26924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 13126515 - 13126630
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||| |||||  |||||||||| ||||||| |||   | ||||||| |||||||||||||||| || |||||||| ||||||||||||  ||||||||    
T  13126515 agcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagcttttttcagcttattttcataag 13126614  T
Q  136 ttctctaagatagctt 151  Q
    ||||| ||||||||||    
T  13126615 ttctcgaagatagctt 13126630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 22030337 - 22030190
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||| |||| | ||||||||||| |||| || |||  || |||||||||||||||||||||||| |||||| |||| ||| |||| |||  |||||    
T  22030337 ttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttctcaggttattttcat 22030238  T
Q  133 aagttctctaagatagcttataa-aaccacttatagcaaatacaaaaa 179  Q
    |||||||||||  || ||| ||| ||| |||||||||| |||||||||    
T  22030237 aagttctctaatttaacttgtaagaacaacttatagcatatacaaaaa 22030190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 53294054 - 53294205
Alignment:
Q  37 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 136  Q
    |||||||||||| ||| |||||| | ||||| |||  ||||||| |||||||||  ||||||   |||||| ||||  ||||||||||   |||||||||    
T  53294054 gcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaacaaattatgatggttttcaaaagctattttcagcttgttttcataagt 53294153  T
Q  137 tctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||||| |||| |||| ||||| |||||||||| |||||||||||||||||    
T  53294154 tctctaatatagtttataaaaacaacttatagcatatacaaaaacaatttaa 53294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 29657474 - 29657393
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaac 158  Q
    |||||||||||||||||||||||| |||||| |||| ||||| ||||||| ||||||| |||||||| ||||||| ||||||    
T  29657474 aacttatgaaaacagcttatgacaattttcaaaagcatttttgagcttaatttcataacttctctaatatagcttgtaaaac 29657393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 55302380 - 55302263
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||||||| ||||||||||||| |||| || ||   ||||||||||  ||||||||||||||| ||||| ||||| ||||||||||||  ||||||||    
T  55302380 agcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaagcttttttcagcttattttcataag 55302281  T
Q  136 ttctctaagatagcttat 153  Q
    || || || |||||||||    
T  55302280 ttttccaacatagcttat 55302263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 24169391 - 24169279
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    ||||||||||||||||||||| ||||||| |||  || ||||| | |||| ||||||||||| ||||||||||  ||||||| ||||  |||||||| ||    
T  24169391 ttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattttttcaacttattttcataagctc 24169292  T
Q  139 tctaagatagctt 151  Q
    || ||||||||||    
T  24169291 tccaagatagctt 24169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 2244179 - 2244032
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    |||||||||| |||||||||| ||| ||| |||  || || || | |||||||||||||||| | ||||||| | ||||||| ||||  |||||||||||    
T  2244179 ttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaacttttttcaccttattttcataagttc 2244080  T
Q  139 tctaagatagctta---taaaaccacttatagca-aatacaaaaacaa 182  Q
    || || ||||||||   |||||| |||||||||| |||||||||||||    
T  2244079 tccaatatagcttatattaaaacaacttatagcataatacaaaaacaa 2244032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 25904159 - 25904280
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||| | || ||||| |||| ||||||| |||  || | ||||||||||||||||||| || ||||||||||| ||||||||||||  || ||    
T  25904159 ttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagcttatttttat 25904258  T
Q  133 aagttctctaagatagcttata 154  Q
    |||||||| || | ||||||||    
T  25904259 aagttctccaaaacagcttata 25904280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 179
Target Start/End: Original strand, 55414406 - 55414503
Alignment:
Q  83 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 179  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||  ||||||||||||| |||||| ||||| ||||| | |||||||| || ||||||    
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaa 55414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 7839344 - 7839450
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 178  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||||  ||| ||||||||  ||  |||||||| ||||| | |||||||| ||||||||    
T  7839344 ttatgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaatttatagcatatacaaaa 7839443  T
Q  179 acaattt 185  Q
    |||||||    
T  7839444 acaattt 7839450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 39603107 - 39603230
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||| |||| ||| ||||||||| ||||||| |||  || |||||| ||||||||||||||||| |||| |||||| ||||| |  |||  |||||    
T  39603107 ttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagctttttttaagttattttcat 39603205  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    |||||||| || ||| |||||||||    
T  39603206 aagttctccaatataccttataaaa 39603230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 35571567 - 35571718
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| ||||||||||| || ||   |||  || ||||| | |||||||||||| ||||| ||||| |||   ||||| ||||  ||||     
T  35571567 ttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctggtttcaacttattttcac 35571666  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 183  Q
    ||||||||||||||||||||| |||||  ||||||||  |||| ||||||||    
T  35571667 aagttctctaagatagcttatgaaaacagcttatagcttatacgaaaacaat 35571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 46588053 - 46588157
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat--aaaaccacttatagcaaatac 174  Q
    |||||| ||||| | ||||||||| |||||||||||||||| || ||||  ||||||||||||| || ||| |||||  ||||| |||||||||| |||     
T  46588053 aacttacgaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaaacaacttatagcatatat 46588152  T
Q  175 aaaaa 179  Q
    |||||    
T  46588153 aaaaa 46588157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 49939890 - 49939979
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    |||||||||||| ||||||| ||| ||||||| |||   | |||||||||||| ||||||||||| | |||||||||  |||||||||||    
T  49939890 agcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacattgttcataagctgttttcagctta 49939979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 15173239 - 15173326
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 120  Q
    |||| ||||||||||| |||||||||| ||||||| |||  || |  ||||||||| ||||||||||| ||||||||||  |||||||    
T  15173239 ttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagtttttttca 15173326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 16199991 - 16200066
Alignment:
Q  107 ataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaaca 181  Q
    |||||||||||| ||||||  ||||||||| ||| |||||||||||| |||||  ||||||||| |||||||||||    
T  16199991 ataagccttttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaaaca 16200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 187
Target Start/End: Complemental strand, 25332891 - 25332753
Alignment:
Q  51 ataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct-ctaagatagc 149  Q
    ||||||||| ||||||| |||  || |||||  ||||||| |||||| || | ||||||||   |||||||||||  ||||||||||||  |||||||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataagttctgataagatagc 25332792  T
Q  150 ttataaaacca-cttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||  | |||| |||  |||||||||||||||||    
T  25332791 ttataaaaatagcttagagcttatacaaaaacaatttaa 25332753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 437100 - 437169
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacact 102  Q
    |||||| |||||| | |||||| |||| ||||||| |||  ||||||||||||||||| |||||||||||    
T  437100 ttgagcatatctagtagcataacttttgtgagactatttgggaaaacttatgaaaacaacttatgacact 437169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 41512730 - 41512633
Alignment:
Q  88 acagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 184  Q
    ||||||||| ||||||||||||||| ||| ||| ||||  ||||||||||||   ||| ||||||| ||||| |||||||||| |  |||||||||||    
T  41512730 acagcttataacacttttcataagcttttatcatcttattttcataagttcttccagaaagcttatgaaaacaacttatagcatacgcaaaaacaatt 41512633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 46592204 - 46592269
Alignment:
Q  92 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    ||||||||| |||||||||||||||| || ||||  ||||||||||||| || ||| |||||||||    
T  46592204 cttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaa 46592269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 1706756 - 1706636
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| |||||||||| |||||||||| ||||||  |||  || || |||||||||||||||||| || | |||||||||  ||| || ||||  |||||    
T  1706756 ttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaacttattttcat 1706657  T
Q  133 aagttctctaagatagcttat 153  Q
    ||| | || ||||||| ||||    
T  1706656 aagctgtccaagatagtttat 1706636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 21523644 - 21523585
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 140  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||||  ||||||| |||||    
T  21523644 ttatgaaaacaacttatgacatttttcataag-ctttttcagcttattttcataacttctc 21523585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 41336850 - 41336802
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| ||||    
T  41336850 aacttaagaaaacagcttatgacagttttcataagcttttttcaactta 41336802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 52172859 - 52172791
Alignment:
Q  33 ttgagcttatctactggcataagt-tttatgagactcttttcgaaaacttatgaaaacagcttatgaca 100  Q
    |||||||||  ||||||||||||| ||| ||||||| ||   |||||||||||||||||||||||||||    
T  52172859 ttgagcttacatactggcataagtatttgtgagactgttggggaaaacttatgaaaacagcttatgaca 52172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 2996660 - 2996554
Alignment:
Q  79 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 177  Q
    |||||||||||| ||||||||| | | ||||||| ||||||| ||||  |||||| | |||| |||||||||||| ||||| ||||||| |  ||| |||    
T  2996660 cttatgaaaacaacttatgaca-tgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaa 2996562  T
Q  178 aacaattt 185  Q
    ||||||||    
T  2996561 aacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 1408040 - 1407970
Alignment:
Q  84 gaaaacagcttatgacacttttcataagc-ctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    ||||||||||||||||| |||||||||||  ||||||||||||  ||||||| || ||  |||||||||||    
T  1408040 gaaaacagcttatgacatttttcataagctgtttttcagcttatcttcataaattttcctagatagcttat 1407970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 37863935 - 37864043
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 176  Q
    |||||||||||||||||||||||||  ||||||||   |||||| ||| |||||||||  || | |||||||||||| ||||  |||||| |  | ||||    
T  37863935 aacttatgaaaacagcttatgacac-gttcataagttgttttcacctt-aattcataacctcaccaagatagcttatgaaacagcttatatcttaaacaa 37864032  T
Q  177 aaacaatttaa 187  Q
    |||||||||||    
T  37864033 aaacaatttaa 37864043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 55064925 - 55064855
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 147  Q
    ||||| |||||||| ||||||||| ||||||  ||| ||||||| ||||  ||||||||||||| ||||||    
T  55064925 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaagata 55064855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 187
Target Start/End: Original strand, 54069403 - 54069508
Alignment:
Q  83 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccac-ttatagcaaatacaaaaaca 181  Q
    |||||||||||||  ||| |||||||||||  |||| | ||||  |||||| |||||  || ||| ||||||||| ||  |||||||| |||||||||||    
T  54069403 tgaaaacagcttacaacaattttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatatacaaaaaca 54069502  T
Q  182 atttaa 187  Q
    ||||||    
T  54069503 atttaa 54069508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 15177233 - 15177293
Alignment:
Q  128 ttcataagttctctaagatagcttataaaa-ccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| |||||||||  ||||||||||||| |||||||||||| ||| || ||||||||||    
T  15177233 ttcattagttctctagtatagcttataaaaaccacttatagcacatagaagaacaatttaa 15177293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 20109675 - 20109611
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctct 141  Q
    ||||| |||||||||||||||||| ||||||||||  |||||| ||| |  || |||||||||||    
T  20109675 aacttttgaaaacagcttatgacatttttcataagtttttttctgctgatttttataagttctct 20109611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 23459761 - 23459658
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| |||||||| |  | ||||| |||  || |||||||||||| ||||||||||| | || |||||   |||||| |||| ||||||    
T  23459761 ttgagcttatctactagcataagtatggtaagactgtttcggagaacttatgaaaaaagcttatgaca-tgttaataagttattttcaacttatattcat 23459663  T
Q  133 aagtt 137  Q
    |||||    
T  23459662 aagtt 23459658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 43886112 - 43886159
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    ||||||||||||||||||||| || |||||||||||  |||||||||||    
T  43886112 aacttatgaaaacagcttatggca-ttttcataagctattttcagctta 43886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 56249613 - 56249566
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||| ||||    
T  56249613 aacttatcaaaacagcttatgaca-ttttcataagcttttttcaactta 56249566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 16937819 - 16937974
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| ||||||||||| ||||| | |||   | ||||||||||||||||||||||||  |||||||||| ||||||||||||  ||| |    
T  16937819 ttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagcttttttcagcttattttcct 16937918  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| || ||||| ||| ||||| |||||||||| |||||||||||||||||    
T  16937919 aagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaa 16937974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 187
Target Start/End: Original strand, 16457935 - 16458070
Alignment:
Q  53 aagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 152  Q
    ||||||| ||||||| |||  || |||||||||||||||||||||||| |||||||||||  ||||||| |||  |||| |||||||| ||  ||||| |    
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctca 16458034  T
Q  153 t-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    | ||||| |||||||||| |||||||||||||||||    
T  16458035 taaaaacaacttatagcatatacaaaaacaatttaa 16458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 10640087 - 10639931
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| |||||||||| |||||||||| ||| | | |||  || |||||||||||||||||||||||| ||||||||||| ||||  ||||||  |||||    
T  10640087 ttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataagctttttctagcttattttcat 10639988  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaat 188  Q
    |||||||| || |||| ||||  |||| ||| ||  || ||||||||||||||||||    
T  10639987 aagttctccaaaatagtttatgtaaacaactcatcacatatacaaaaacaatttaat 10639931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 39105599 - 39105443
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaa-aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 131  Q
    ||||| |||||||  || ||||||||||||||||| |||| | | || ||||||||||||||||||||| | |||||||||  |||| ||||||  ||||    
T  39105599 ttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttca 39105500  T
Q  132 taagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||| |||||||||||| |||||   |||||||  |||| ||||||||||||    
T  39105499 taagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaa 39105443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 43301012 - 43300865
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| || ||||||||||||||||||||| ||   || || |||| |||||||| ||||||| |||  |||||| | ||||||||||  |||||    
T  43301012 ttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatgacattttatataagcatgtttcagcttattttcat 43300913  T
Q  133 aagttctctaagatagctta-taaaaccacttatagcaaatacaaaaa 179  Q
    |||||||| |||||||||||  ||||| |||||||| | |||||||||    
T  43300912 aagttctccaagatagcttacaaaaacaacttataggatatacaaaaa 43300865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 9202684 - 9202804
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||| |||||||||||||| | ||||| |||  ||||||| ||| ||||||||||||||| | |||||||||  ||| |||||||  |||||    
T  9202684 ttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctgtttccagcttattttcat 9202783  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||||  |||||| |||||    
T  9202784 aagttcttcaagataacttat 9202804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 29925970 - 29925820
Alignment:
Q  37 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 136  Q
    ||||||||||| ||| ||||||| ||||||  |||  || |||||||||||||||||||||||| | |||||  |  ||||||| ||||  |||||||||    
T  29925970 gcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagt 29925872  T
Q  137 tctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||| || |||||||||  |||| |||||||||| ||||| |||||||||||    
T  29925871 tctccaatatagcttatgtaaacaacttatagcacatacagaaacaatttaa 29925820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 40426899 - 40426745
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| || ||||| |||| ||||||| |||  |    ||||||||||||||||||| || ||||||||||| ||||| ||||||  ||| |    
T  40426899 ttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagcttattttcgt 40426800  T
Q  133 aagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaattta 186  Q
    |||||||| |||| ||||||   ||||  |||| |||||||||||||||||||||    
T  40426799 aagttctccaagacagcttacggaaacagcttacagcaaatacaaaaacaattta 40426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 31038418 - 31038333
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 118  Q
    |||||||||||||| |||||||||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  31038418 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 31038333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 31047642 - 31047557
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 118  Q
    |||||||||||||| |||||||||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  31047642 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 31047557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 7705934 - 7706054
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||| |||||||| ||||||||||| |||  ||||||  || |||||||||||||||||||||||| ||||||   || |||||| |||||  ||||     
T  7705934 ttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctgcttttttcggcttattttcac 7706033  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||||| || |||||||||    
T  7706034 aagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 7985103 - 7984983
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||||||||||||||| ||| ||||||| |||  || | |||| ||||||||||| ||||  | |||||||||  |||||||||||  |||||    
T  7985103 ttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttcat 7985004  T
Q  133 aagttctctaagatagcttat 153  Q
    || ||||| ||||||||||||    
T  7985003 aaattctccaagatagcttat 7984983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 12857274 - 12857398
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| || | |||||||| ||| ||| ||   || |||||||||||||| ||||||||| |||||| |||| ||||||||||||  ||  |    
T  12857274 ttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcacaagcttttttcagcttatttttgt 12857373  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    |||||||| || |||||||||||||    
T  12857374 aagttctccaatatagcttataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 12857685 - 12857765
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    |||||||||||||| ||||||||| |||||| || | ||||||||||||  ||||||||||||| || |||||||||||||    
T  12857685 aacttatgaaaacaacttatgacaattttcacaaccttttttcagcttattttcataagttctccaatatagcttataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 42500184 - 42500298
Alignment:
Q  38 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 137  Q
    |||| |||||| |||||||||| |||||||| ||| || |||||||| ||||| |||| |||| |||||||||| |||||||| ||||  ||||||||||    
T  42500184 cttacctactgacataagttttgtgagactc-tttggagaacttatggaaacaacttacgacaattttcataag-ctttttcaacttattttcataagtt 42500281  T
Q  138 ctctaagatagcttata 154  Q
    ||| || ||||||||||    
T  42500282 ctccaatatagcttata 42500298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 32009808 - 32009674
Alignment:
Q  52 taagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcat-aagcctttttcagcttaaattcataagttctctaagatagct 150  Q
    |||||||| ||||||| |||   |||||||||||||||||||| ||||| ||||||| |||| ||||| | |||   ||||||||||||| || ||||||    
T  32009808 taagttttgtgagactatttggaaaaacttatgaaaacagcttgtgacaattttcataaagcttttttgaacttgttttcataagttctccaatatagct 32009709  T
Q  151 tat-aaaaccacttatagcaaatacaaaaacaatt 184  Q
    ||| ||||| | |||||||| |||||| |||||||    
T  32009708 tataaaaacaatttatagcatatacaagaacaatt 32009674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 3735138 - 3735202
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctct 141  Q
    |||| ||||||||||||||||||| |||||| |||| ||||||||||||  ||||||||||||||    
T  3735138 aactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagttctct 3735202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 152
Target Start/End: Original strand, 35445780 - 35445898
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| |||||||||| |||||||||| |||||||||||   | || ||||||||||||||||| ||| | ||||| || | |||||| ||||  |||||    
T  35445780 ttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataaca-tgttcattaggcattttcaccttattttcat 35445878  T
Q  133 aagttctctaagatagctta 152  Q
    || ||||| |||||||||||    
T  35445879 aaattctccaagatagctta 35445898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 153
Target Start/End: Original strand, 19460330 - 19460442
Alignment:
Q  40 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 139  Q
    |||||||||||||||||||  ||||||| |||  || ||||| || ||||| ||||||| | |||||||||| || ||||||||||  ||||||||||||    
T  19460330 tatctactggcataagtttagtgagactgtttaggagaacttttggaaacaacttatgatatttttcataag-ctgtttcagcttattttcataagttct 19460428  T
Q  140 ctaagatagcttat 153  Q
      |||||| |||||    
T  19460429 tgaagataacttat 19460442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 37954773 - 37954696
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    ||||||||||||||||||| | ||||||| ||| ||||||| ||||  |||||| |||||| || |||||||||||||    
T  37954773 ttatgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaa 37954696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 15246967 - 15246847
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||||||||||| ||| | |||  || ||||||||||| || |||||||||   ||||||||  |||| || ||||  || ||    
T  15246967 ttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacatcattcataagttttttgcaacttatttttat 15246868  T
Q  133 aagttctctaagatagcttat 153  Q
     | ||||||||||||||||||    
T  15246867 catttctctaagatagcttat 15246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 1465000 - 1465091
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagc 168  Q
    ||||||||||||||||||||| || |  |||||||   |||||||||||  |||| |||| ||| ||||||||||||||||  |||||||||    
T  1465000 aacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttcacaagtcctccaagatagcttataaaataacttatagc 1465091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 25461169 - 25461074
Alignment:
Q  89 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaat 183  Q
    ||||||||| || ||||||||| | ||||||||||||  ||||| ||||||| || | ||||||| ||||| ||||||| || |||||||||||||    
T  25461169 cagcttatggcaattttcataaacgtttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatacaaaaacaat 25461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 11700296 - 11700163
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||| ||||||||||||||| ||||||| |||   | |||||||| ||||| ||||||||| | |||||||   | ||||| ||||  |||||    
T  11700296 ttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataa-attgtttcatcttattttcat 11700198  T
Q  133 aagttctctaagatagcttat-aaaaccacttata 166  Q
    |||||||| | |||||| ||| ||||| |||||||    
T  11700197 aagttctccacgatagcatatcaaaacaacttata 11700163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 2568747 - 2568636
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatac- 174  Q
    |||||||||||||||||||||||| | ||||||||   |||| ||||||  ||||| || |||| | |||||||||| ||||| |||||||||  ||||     
T  2568747 aacttatgaaaacagcttatgaca-tattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacg 2568649  T
Q  175 aaaaacaatttaa 187  Q
    |||||||||||||    
T  2568648 aaaaacaatttaa 2568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 9107224 - 9107100
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||||| || |||||||||| ||||| | |||  || |||| |||||||||||||| |||| |||||| || | |||||| ||| |  |||||    
T  9107224 ttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaacttttttctgctaattttcat 9107125  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    |||||||| || ||| |||| ||||    
T  9107124 aagttctccaatataacttacaaaa 9107100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 22209760 - 22209796
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactct 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  22209760 ttgagcttatctactggcataagttttctgagactct 22209796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 34669709 - 34669773
Alignment:
Q  77 aacttatgaaaac-agcttatgacacttttcataagcctttttcagcttaaattcataagttctc 140  Q
    ||||||||||||| | || |||||| ||||||||||| ||||||||||||| |||| ||||||||    
T  34669709 aacttatgaaaactaactaatgacatttttcataagcttttttcagcttaatttcagaagttctc 34669773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 35446138 - 35446082
Alignment:
Q  84 gaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 140  Q
    |||||||| |||||||| ||||| ||||| ||||||||||||  |||||||||||||    
T  35446138 gaaaacagtttatgacatttttcgtaagcttttttcagcttattttcataagttctc 35446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 36797032 - 36797124
Alignment:
Q  34 tgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagc-ttatgacacttttcataagcctttttcagctta 125  Q
    ||||||| |||||||| || |||||||||||| | |||| || ||||||| |||||| | || ||||| ||||||||||| |||||| |||||    
T  36797032 tgagcttctctactggtattagttttatgagaatgttttggagaacttataaaaacaactttctgacaattttcataagcttttttcggctta 36797124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 3520711 - 3520632
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 112  Q
    ||||||| ||||||| | ||||||| | ||||||| |||  || |||||||||||||| ||||||||  |||||||||||    
T  3520711 ttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatgacttttttcataagc 3520632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 3932612 - 3932719
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||    |||||| ||| ||||||| |||  ||||||||   |||||||||||||| | ||||||||||| |||| |||||||  ||| |    
T  3932612 ttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttatgataattttcataagctttttacagcttattttcgt 3932711  T
Q  133 aagttctc 140  Q
    ||||||||    
T  3932712 aagttctc 3932719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 4014426 - 4014480
Alignment:
Q  99 cacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    |||| |||||||||  |||||||||||  ||||||||||||| ||||||||||||    
T  4014426 cactgttcataagctgttttcagcttattttcataagttctccaagatagcttat 4014480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 39477967 - 39477893
Alignment:
Q  83 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    |||| |||||| |||||| |||||| |||  |||||| |||||  |||| ||||||||||| |||||||||||||    
T  39477967 tgaacacagctgatgacaattttcaaaagtttttttctgcttattttcagaagttctctaacatagcttataaaa 39477893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 2973524 - 2973557
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataa 110  Q
    |||||||||||||||||||||||| |||||||||    
T  2973524 aacttatgaaaacagcttatgacaattttcataa 2973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 3280696 - 3280771
Alignment:
Q  78 acttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat-aagttctctaagatagcttat 153  Q
    ||||||||||||||||||||||| | |||||||||  |||| || |||  ||||| |||||||| ||||||||||||    
T  3280696 acttatgaaaacagcttatgaca-tcttcataagctctttttagtttattttcataaagttctcaaagatagcttat 3280771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 6096681 - 6096602
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaa-aacttatgaaaacagcttatgacacttttcataagc 112  Q
    |||| |||||||||||||||||||||| ||||||| |||  ||| |||||| | ||||||||| ||||| | |||||||||    
T  6096681 ttgaacttatctactggcataagttttgtgagact-tttaggaagaacttacgtaaacagcttgtgacattgttcataagc 6096602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 13697764 - 13697828
Alignment:
Q  102 ttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttata 166  Q
    ||||||||||  ||||||| ||||  ||||||| ||||| || |||||||||||||| |||||||    
T  13697764 ttttcataagtttttttcaacttattttcataacttctccaacatagcttataaaacaacttata 13697828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 29845375 - 29845489
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||| |||||||| |||||  ||||  ||||||| |  || |||||||||||| ||||||||| || ||  ||||||  ||||||||||| ||||||||     
T  29845375 agctaatctactgacataaaatttacaagactctctgggagaacttatgaaaa-agcttatgatacgtta-ataagctgttttcagcttatattcataac 29845472  T
Q  136 ttctctaagatagctta 152  Q
    ||||| |||||||||||    
T  29845473 ttctccaagatagctta 29845489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 32859703 - 32859762
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 140  Q
    ||||||||||| |||| |||| |||||||||| |||||||||||||  ||||||| |||||    
T  32859703 ttatgaaaacaacttacgacatttttcataag-ctttttcagcttattttcataacttctc 32859762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 32861875 - 32861934
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctc 140  Q
    ||||||||||| |||| |||| |||||||||| |||||||||||||  ||||||| |||||    
T  32861875 ttatgaaaacaacttacgacatttttcataag-ctttttcagcttattttcataacttctc 32861934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 32942726 - 32942650
Alignment:
Q  35 gagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataag 111  Q
    |||||| ||||||| |||||||||| |  |||| |||  || || ||||||| ||||||||||||| ||||||||||    
T  32942726 gagcttttctactgacataagttttgtttgactgtttgggagaatttatgaatacagcttatgacatttttcataag 32942650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 41419453 - 41419365
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcag 121  Q
    ||||||| |||||||| ||||| |||| ||||| | |||  || ||||| |||||||||||||||||| | ||||| |||  |||||||    
T  41419453 ttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacattgttcatgagctattttcag 41419365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 42646757 - 42646685
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 149  Q
    |||||||||||| || ||| |||| ||||||||||| ||||| || |||  | ||||||||||| ||||||||    
T  42646757 aacttatgaaaaaagtttaggacatttttcataagctttttttagtttatttccataagttctcgaagatagc 42646685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 179
Target Start/End: Original strand, 18405767 - 18405914
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||||||||| ||||||| ||| | | ||||||||||||||| | | |||||||||||||| | ||||  ||||||| |||||    
T  18405767 ttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaagcttaatttcat 18405866  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 179  Q
    |||||||| |||||||||||| ||||| |||||||||| |||||||||    
T  18405867 aagttctccaagatagcttatgaaaacaacttatagcatatacaaaaa 18405914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 39980863 - 39980708
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| ||||||||||| ||||||| |||  || |||||||||||||||||||||||   |||||||||| ||||||| ||||  |||||    
T  39980863 ttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagcttttttcaacttattttcat 39980764  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| || ||||||||| ||||| ||||||||||  | ||||||||||||||    
T  39980763 aagttctccaatatagcttataaaaacaacttatagcatgttcaaaaacaatttaa 39980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 20880610 - 20880455
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| ||||||||||  | ||||| |||  || ||| |||||||||||||||||||| ||||||||||| ||||| ||||||  |||||    
T  20880610 ttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttttttgagcttattttcat 20880511  T
Q  133 aagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| || ||||||| ||||| ||  |||||||| |||||||||||||||||    
T  20880510 aagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaa 20880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 30444027 - 30443872
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||||||||| |||  ||||||| |||   | | |||||||||||||||||||||| |||||| |||| ||||||||||||  |||||    
T  30444027 ttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttcat 30443928  T
Q  133 aagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| || |||| |||||||| || ||||||||| |||||||| ||||||||    
T  30443927 aagttctccaatatagtttataaaaacagcttatagcatatacaaaagcaatttaa 30443872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 188
Target Start/End: Original strand, 53789406 - 53789553
Alignment:
Q  40 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 139  Q
    ||||||||| |||||||||| |||||||  ||  || ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  53789406 tatctactgacataagttttgtgagact--ttgagagaacttttggaaacagcttatgacacttttcataagcttttttcagcttaatttcataagttct 53789503  T
Q  140 ctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaat 188  Q
    | | |||||||||| | ||| |||||||||| |||| |||||| ||||||    
T  53789504 ccatgatagcttatgataacaacttatagcatataccaaaacattttaat 53789553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 24085274 - 24085398
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||| |||||||||||| |||||||  ||| || |||||||||||||||||||||  ||| |||||| ||  |||||||||||  ||||     
T  24085274 ttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgttttcagcttattttcac 24085373  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    |||||||| ||||||||||| ||||    
T  24085374 aagttctccaagatagcttacaaaa 24085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 584180 - 584025
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| ||||||||| | ||||||| |||| || || |||||||||||||||| | || |||||||| |  | ||| ||||||| |||||    
T  584180 ttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagcttacggcagttttcataggtttctttaagcttaatttcat 584081  T
Q  133 aagttctctaagatagcttataaaac-cacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||  |||||||||||| ||||  ||||||||||   |||||||||||||||    
T  584080 aagttcttcaagatagcttatgaaactaacttatagcatgaacaaaaacaatttaa 584025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 21367801 - 21367646
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||||||  ||||||||||| || |||| |||  || |||||||||||||||||||||||| | |||| ||||  |||||||||||  |||||    
T  21367801 ttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcat 21367702  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| |||||||||||| ||||| |||||||    |||| ||||||||||||    
T  21367701 aagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaa 21367646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 31365124 - 31365211
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 120  Q
    ||||||||||||| ||||||||||||| ||||||| |||  || ||||||||||| |||||||||||| ||||||||||| |||||||    
T  31365124 ttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttca 31365211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 36631031 - 36631142
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 175  Q
    ||||||||||| |||||||||||  |||||| |||| |||||| |||||  ||||||||||||| || |||||| || ||||| ||||||||||  ||||    
T  36631031 aacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtaca 36631130  T
Q  176 aaaacaatttaa 187  Q
    ||||||||||||    
T  36631131 aaaacaatttaa 36631142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 3845499 - 3845618
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||||||||||||||| ||||||| |||   | ||| | |||| |||| |||||||| |||| |||| | ||||||||||||  |||||    
T  3845499 ttgagcttatctactggcataagttttgtgagactgtttgatagaacatctgaagacagattatgaca-tttttataatcttttttcagcttattttcat 3845597  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||||| |||||| |||||    
T  3845598 aagttctccaagataacttat 3845618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 46031124 - 46031004
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||||| ||  ||||||||||||||||| |||  || |||||| ||||||||| ||||||| | |||||||||  |||||||||||  || ||    
T  46031124 ttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagcttattttaat 46031025  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||||| ||||||| ||||    
T  46031024 aagttctccaagatagtttat 46031004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 402526 - 402633
Alignment:
Q  81 tatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaa 179  Q
    |||||||||||||||||||| | |||||||||  |||||||||||| |||| |||||||  ||||||| |||||||| || |||||| |  |||| ||||    
T  402526 tatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaa 402625  T
Q  180 caatttaa 187  Q
    ||||||||    
T  402626 caatttaa 402633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 902017 - 901934
Alignment:
Q  74 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    |||||||||||||||||||| || ||| ||| ||||||| ||||||| ||||  ||||||||||||| || |||||||||||||    
T  902017 gaaaacttatgaaaacagctaataacattttccataagcttttttcaacttattttcataagttctccaatatagcttataaaa 901934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 46778127 - 46778281
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| || |||||||| |||| ||| ||  |||  || |||||||||||||| ||||||||| ||||||||||  || |||||||| | |||||    
T  46778127 ttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagctt-atttcat 46778225  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| || ||||||| |||| |||||   |||||||| | |||||||||||||||    
T  46778226 aagttgtccaagatagtttatgaaaacagtttatagcataaacaaaaacaatttaa 46778281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 34610742 - 34610862
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||||||||| |   ||| |||  || ||||||||||||| |||||||||| | ||||||||   ||||||||| |  |||||    
T  34610742 ttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacattgttcataagtggttttcagctgattttcat 34610841  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||| | ||||||||||||    
T  34610842 aagttcgccaagatagcttat 34610862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 20170613 - 20170502
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaataca 175  Q
    |||||| |||||||||| |||  | ||||||||||| ||||||| ||||  ||||| ||||||| || ||| ||| ||||| || ||||||||| |||||    
T  20170613 aacttaagaaaacagctaatgggatttttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatataca 20170514  T
Q  176 aaaacaatttaa 187  Q
    ||||||||||||    
T  20170513 aaaacaatttaa 20170502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 20257664 - 20257514
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaatt-cataagtt 137  Q
    |||||||| | ||||| |||| ||||||| |||  || ||||||||||| ||||| |||||| ||||||||||  ||||  | ||||  || |||||| |    
T  20257664 ttatctacagccataaattttgtgagactgtttgggagaacttatgaaagcagctaatgacaattttcataagttttttaaaacttatttttcataagct 20257565  T
Q  138 ctctaagatagctt-ataaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||| || ||||||| | ||||| |||||||||| |||||||||||||||||    
T  20257564 ctccaatatagcttcaaaaaacaacttatagcatatacaaaaacaatttaa 20257514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 167
Target Start/End: Complemental strand, 22203561 - 22203429
Alignment:
Q  35 gagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataa 134  Q
    |||||||||||| | ||| | |||| ||||||| |||  || |||||||||||||||||||||||| ||| | ||||| |  | ||| |||  |||||||    
T  22203561 gagcttatctaccgacattaattttgtgagactgtttg-gagaacttatgaaaacagcttatgacattttacttaagcttaatgcagtttattttcataa 22203463  T
Q  135 gttctctaagatagcttat-aaaaccacttatag 167  Q
    |||||| |||||||||||| ||||| ||||||||    
T  22203462 gttctccaagatagcttatgaaaacaacttatag 22203429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 31365245 - 31365391
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||||| |||||||| |||| ||| ||| |||  || |||||||||| ||||||||||||| |||||||||  |||||||| || |  |||||    
T  31365245 ttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataaatctttttcaactcattttcat 31365344  T
Q  133 aagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    || ||||| || ||        |||| |||||||||| |||||||||||||||||    
T  31365345 aaattctccaatat--------aaacaacttatagcatatacaaaaacaatttaa 31365391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 35959454 - 35959547
Alignment:
Q  95 atgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||| |||||| |||| ||||||||||||  |||| || |||||||| |||||||||| |||| ||||| |||| ||||||||| |||||||    
T  35959454 atgacaattttcaaaagcttttttcagcttattttcaaaaattctctaatatagcttatagaaacaacttacagcatatacaaaaataatttaa 35959547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 49556997 - 49556900
Alignment:
Q  34 tgagcttatctactggcataagttttatgagactctt-----ttc-gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    |||||||||| | ||||||||||||| ||||||||||     ||| || || ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  49556997 tgagcttatcaagtggcataagttttgtgagactcttagtctttcagagaatttatgaaaacagcttatgacaattttcataagcttttttcaactta 49556900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 46478767 - 46478684
Alignment:
Q  89 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctcta--agatagcttataaaacc-acttatagca 169  Q
    |||||||||||| ||||||||||| ||||||| ||||  ||||||||||||| |  | ||||||||||||||| ||||||||||    
T  46478767 cagcttatgacagttttcataagcttttttcaacttattttcataagttctccaatatatagcttataaaaccaacttatagca 46478684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 13715508 - 13715665
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||| |||||||||| ||||| ||||| ||||||| |||   | |||||   ||||||||||||||||  |||||||||| ||||||| ||||  |||||    
T  13715508 ttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatgacaactttcataagcatttttcaacttattttcat 13715607  T
Q  133 aagttctctaagatagcttat---aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| || || || ||||||   ||||| ||||||| || |||||||| ||| ||||    
T  13715608 aagttgtccaatatcgcttatataaaaacaacttatatcatatacaaaatcaaattaa 13715665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 34034225 - 34034158
Alignment:
Q  40 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttca 107  Q
    |||||||||||| | ||||| |||||||||||  || ||||||||||||||||||| |||| ||||||    
T  34034225 tatctactggcacacgttttgtgagactctttaggagaacttatgaaaacagcttaggacagttttca 34034158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 47132391 - 47132309
Alignment:
Q  107 ataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaatttaat 188  Q
    |||||| ||||||| ||||  ||||||| ||||| || ||||||||||||| || | ||||||| ||||||||||||||||||    
T  47132391 ataagcttttttcaacttattttcataacttctccaatatagcttataaaaacaacctatagcatatacaaaaacaatttaat 47132309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 37689319 - 37689212
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 175  Q
    |||||| ||||||||||||||||| |||||| |||| ||||||| ||||  ||||||||| |||| | ||| || || ||||| || ||||||| |||||    
T  37689319 aacttaagaaaacagcttatgacaattttca-aagcttttttcaacttattttcataagtgctctgatata-ctcataaaaacaacctatagcatataca 37689222  T
Q  176 aaaacaattt 185  Q
    ||||||||||    
T  37689221 aaaacaattt 37689212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 4401127 - 4401026
Alignment:
Q  84 gaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaat 183  Q
    ||||||||||||||||| ||| |||||||  |||| | ||||  ||||||||||||| || ||| ||  |||||| |||||||||| |||| |||| |||    
T  4401127 gaaaacagcttatgacaatttccataagctgtttttaacttattttcataagttctccaatataact--taaaacaacttatagcatatacgaaaataat 4401030  T
Q  184 ttaa 187  Q
    ||||    
T  4401029 ttaa 4401026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 39602147 - 39602266
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||| |||||||||| |||||| |||| || |||   | | |||||||| ||||||||||||| | |||||||    |||||| ||||  |||||    
T  39602147 ttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatgaca-tgttcataaattgttttcaacttattttcat 39602245  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||||| ||||||||||||    
T  39602246 aagttctcaaagatagcttat 39602266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 44061046 - 44061114
Alignment:
Q  120 agcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||||| |||||||||||||||||||| | ||| ||||| |||||||||  ||| |||||||||||||    
T  44061046 agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttatagaaaaacaatttaa 44061114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 45541660 - 45541585
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    |||||||||||||||||||||||| | |||||||||  ||||||| |||   ||||||||| || ||||||||||||    
T  45541660 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaggttattctcataagttatccaagatagcttat 45541585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 24684758 - 24684825
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 100  Q
    ||||||||||||||||||||||||||| ||||||  |||     |||||||||||||| |||||||||    
T  24684758 ttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttatgaca 24684825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 28795839 - 28795910
Alignment:
Q  83 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 154  Q
    ||||||| | || ||||| ||||| |||||  |||||||||||  |||||||||||||||| ||||||||||    
T  28795839 tgaaaacggtttttgacaattttcttaagctcttttcagcttattttcataagttctctaatatagcttata 28795910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 154
Target Start/End: Complemental strand, 37389311 - 37389196
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    |||||||| | |||||||||| ||||||||||   || |||||||||||||| ||||||||| | |||| | ||   ||| ||||||   |||||||| |    
T  37389311 ttatctacagacataagttttgtgagactcttcgggagaacttatgaaaacaacttatgacattgttcaaatgctgcttttagcttattctcataagtac 37389212  T
Q  139 tctaagatagcttata 154  Q
    || |||||||||||||    
T  37389211 tccaagatagcttata 37389196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 46886628 - 46886783
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||| ||||||||| ||||  |||||| |||  |  | || |||||||||||||||| || | ||| ||||   | ||||| |||  ||||     
T  46886628 ttgagcttatctgctggcataaattttgagagactgtttgggtgagctgatgaaaacagcttatggcattgttcgtaagttatgttcaggttattttcaa 46886727  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| |||||||||||| |||||  ||||||||  ||||||||| |||||||    
T  46886728 aagttctccaagatagcttatgaaaacagcttatagctcatacaaaaataatttaa 46886783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 51929293 - 51929380
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 120  Q
    |||| ||||| |||||||||||||||| ||| ||| |||  || || || ||||||||| |||||||| |||||||| || |||||||    
T  51929293 ttgaccttatttactggcataagttttgtgatactatttgagagaatttctgaaaacagattatgacaattttcataggcttttttca 51929380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 466325 - 466207
Alignment:
Q  35 gagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataa 134  Q
    ||||||| | |||| ||||  |||| ||||||| |||  || ||||||  |||||||||| | ||| ||||| ||||| ||||| ||||||  |||||||    
T  466325 gagcttaaccactgacatagattttgtgagactgtttgggataacttacaaaaacagcttttaacatttttcttaagctttttttagcttattttcataa 466226  T
Q  135 gttctctaagatagcttat 153  Q
    |||||| || |||||||||    
T  466225 gttctccaacatagcttat 466207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 9832691 - 9832797
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| || || |||||||||| | | ||| |||  || ||||| ||||||||||||||| |  ||||||||| | ||||||| |||| ||| ||    
T  9832691 ttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatgccttttttcataaacttttttcaacttatatttat 9832790  T
Q  133 aagttct 139  Q
    |||||||    
T  9832791 aagttct 9832797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 30956659 - 30956717
Alignment:
Q  130 cataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||||| |||||||||| | ||||| |||||||||  |||||||||||||||||    
T  30956659 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaa 30956717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 30972471 - 30972529
Alignment:
Q  130 cataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||||| |||||||||| | ||||| |||||||||  |||||||||||||||||    
T  30972471 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaa 30972529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 33883768 - 33883806
Alignment:
Q  115 ttttcagcttaaattcataagttctctaagatagcttat 153  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  33883768 ttttcagcttattttcataagttctctaagatagcttat 33883806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 944655 - 944591
Alignment:
Q  74 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    ||||||||||||||| ||||||||||| ||| ||||| | ||||||| ||||  |||||| ||||    
T  944655 gaaaacttatgaaaatagcttatgacaatttccataatcttttttcaacttactttcatatgttc 944591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 26911671 - 26911627
Alignment:
Q  81 tatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    |||||||||||||||||||| ||||||||||  ||||||| ||||    
T  26911671 tatgaaaacagcttatgacaattttcataagtttttttcaactta 26911627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 47132450 - 47132397
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaa 88  Q
    |||||||||||||||||||  |||||| ||||||| |||| || ||||||||||||    
T  47132450 ttgagcttatctactggca--agttttgtgagactgttttggagaacttatgaaaa 47132397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 41851669 - 41851514
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| || || ||||||| |||||||  ||  || || ||||| ||||| ||||||||||||||||||||| ||| ||||||||| |||||    
T  41851669 ttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttcat 41851570  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    || ||||| |||||||||| | ||||| |||||||||| |||||||||||||||||    
T  41851569 aaattctccaagatagcttctgaaaacaacttatagcatatacaaaaacaatttaa 41851514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 15757594 - 15757750
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| |||||||||||||||| |||||||  ||  || || |||||||||| |||||||||| |||||| |||| ||||||||||||  |||||    
T  15757594 ttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttcagcttattttcat 15757693  T
Q  133 aagttctctaagatagcttataaa-accacttatagcaaatac-aaaaacaatttaa 187  Q
    | |||||||   |||||||||||| || |||||||||| |||| |||||||||||||    
T  15757694 acgttctcttgtatagcttataaatacaacttatagcatatacaaaaaacaatttaa 15757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 43279466 - 43279616
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaa--acttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcata 133  Q
    |||||||||||| ||||||||||| ||||||| |||  || |  | ||||||||||||||||||||| ||||||||||| ||||||| ||||  |||| |    
T  43279466 agcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcaca 43279565  T
Q  134 agttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaattt 185  Q
    ||||||| || ||||||||| ||||| |||||||||  |||||||||||||||    
T  43279566 agttctccaatatagcttataaaaacaacttatagc--atacaaaaacaattt 43279616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 45229645 - 45229491
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||||||||||||| |   | ||  |||  || |||||||||||| | ||||||||| ||||||| ||| ||||||||||||  |||||    
T  45229645 ttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagcttttttcagcttattttcat 45229546  T
Q  133 aagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| |||||||||||| ||| || | ||| || |||||||||||||||||    
T  45229545 aagttctcgaagatagcttatgaaaacaatgataacatatacaaaaacaatttaa 45229491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 187
Target Start/End: Complemental strand, 18066259 - 18066107
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    ||||||||||||| |||||||||| ||| ||| ||||  | |||||||||||||||||||||||| |  ||||||||  |||||| ||||  ||| ||||    
T  18066259 agcttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaag 18066160  T
Q  136 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| |||||||||||| |||||  ||||||||  |||  ||||||||||||    
T  18066159 ttctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaa 18066107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 26202162 - 26202025
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||| ||||||| ||| |||||||||| ||||| ||||| | | || |||||| |||| ||||||||| ||||||||||| ||||||| ||||  |||||    
T  26202162 ttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaattttcataagcttttttcaacttattttcat 26202063  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagca 169  Q
    |||||||| || ||| ||||| ||||| ||||||||||    
T  26202062 aagttctccaatatatcttataaaaacaacttatagca 26202025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 20952489 - 20952342
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| |||||||| ||||||| | ||||| |||  || ||||||||||||||| ||||| || ||||||| | | ||||||| ||||  |||||    
T  20952489 ttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttttttcaacttattttcat 20952390  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaa 179  Q
    |||||||| || |||||| || ||||| |||||||||| ||| |||||    
T  20952389 aagttctccaatatagctaataaaaacaacttatagcatataaaaaaa 20952342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 39659445 - 39659600
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| |||||||||  |||| || | |  || |||||| |||||||||||||||||  |||  ||||| ||| ||| ||||  |||||    
T  39659445 ttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttatgacaaattttctaagcttttgtcaccttatcttcat 39659544  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||||| ||||||||| ||||| | ||||| || | |||||||||||||||    
T  39659545 aagttctctaatatagcttataaaaacaagttataacatagacaaaaacaatttaa 39659600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 33981214 - 33981140
Alignment:
Q  75 aaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 149  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||| ||||| ||||||| ||||| ||||||||    
T  33981214 aaaacttatgaaaacggcttatgacacatttcataagcttttttcaacttaatttcataaattctccaagatagc 33981140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 41812072 - 41812181
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaa 176  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||| ||| | ||| |||||| || |||||||||| | ||||  ||| ||||| ||||||    
T  41812072 aacttttgaaaacagcttatgacatttttcataagcttttttcaactt-atttcctaagttttccaagatagcttttgaaacatcttgtagcatatacaa 41812170  T
Q  177 aaacaatttaa 187  Q
    |||||||||||    
T  41812171 aaacaatttaa 41812181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 449981 - 449877
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| ||||||||||||||||| | |||  ||  |||| |||||||||||||||||| |||||||||||  |||| | ||||| || ||    
T  449981 ttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataagctatttttaacttaatttgat 449882  T
Q  133 aagtt 137  Q
    |||||    
T  449881 aagtt 449877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 187
Target Start/End: Complemental strand, 32592717 - 32592566
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||||||  |||||||||||||  ||| || |||  || |||||||||||| |||||| |||| ||||||||||| ||| ||| ||||  ||||||||    
T  32592717 agcttatctgatggcataagttttgggagtctatttgggagaacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataag 32592618  T
Q  136 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| || || |||||| ||||| |||||||||  |||| ||||||||||||    
T  32592617 ttctccaatattgcttataaaaacaacttatagcgtatac-aaaacaatttaa 32592566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 1626034 - 1625879
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||  ||| |||||||||| | ||||| |||  || |||||||||||  ||||||||||| | ||||||||   ||||||||| |  ||| |    
T  1626034 ttgagcttatcccctgacataagttttgtaagactatttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgt 1625935  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| |||||||||||| ||||| ||||||| |  |||| ||||||||||||    
T  1625934 aagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaa 1625879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 41241069 - 41241223
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| |||| |||| |||||| ||||| | |||   | ||||| ||||||||  |||| || |||| ||||||| ||||||||||||| ||||     
T  41241069 ttgagcttatttactcgcatgagttttgtgagattgtttggtagaacttgtgaaaacaaattataac-ctttccataagcttttttcagcttaatttcac 41241167  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| || |||||| ||||  ||||| |||||||||| |||||||||||||||||    
T  41241168 aagttttccaagataacttaggaaaactacttatagcatatacaaaaacaatttaa 41241223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 750804 - 750679
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| |||||| |||||||| ||||| ||||| | ||| | | |||||||||||| |||| |||||| | |||||||||  |||| ||||||  | |||    
T  750804 ttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagcttatttgcat 750705  T
Q  133 aagttctctaagatagcttataaaac 158  Q
    |||||||| |||||||||||| ||||    
T  750704 aagttctccaagatagcttatgaaac 750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 187
Target Start/End: Original strand, 12464416 - 12464564
Alignment:
Q  40 tatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 139  Q
    ||||||||  |||||||||| ||||| | |||  || | ||||  |||| |||||| ||||  ||||| |||| ||||||||||||  |||| |||||||    
T  12464416 tatctactaacataagttttgtgagaatgtttgggacatcttacaaaaaaagcttacgacatatttcacaagcttttttcagcttattttcacaagttct 12464515  T
Q  140 ctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    | |||||||||||| ||||   ||||||||| |||||||||||||||||    
T  12464516 ccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaa 12464564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 19608569 - 19608661
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    ||||| |||||||||| |||| ||||||||||||| ||| ||| ||||||| || ||||||||||||| | |||||||||  |||| ||||||    
T  19608569 ttgagtttatctactgacataggttttatgagactgtttgcgagaacttataaacacagcttatgacattcttcataagctattttgagctta 19608661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 41293111 - 41293219
Alignment:
Q  45 actggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaag 144  Q
    ||||| || |||||| ||||||| |||  || ||||||| |||||||||||||||| ||  |||||||  ||||||||||| |||||||||| ||| | |    
T  41293111 actggtattagttttgtgagactatttgggagaacttataaaaacagcttatgacatttcgcataagctgttttcagcttatattcataagtactccagg 41293210  T
Q  145 atagcttat 153  Q
    |||||||||    
T  41293211 atagcttat 41293219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 7035520 - 7035627
Alignment:
Q  50 cataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 149  Q
    |||||||||| ||||||| ||||  | |||||||| ||||||||||||||||  ||||||||   ||||| |||||  |||||||||| || |||||||     
T  7035520 cataagttttgtgagactgttttgaagaacttatggaaacagcttatgacacagttcataaggtgttttccgcttattttcataagttttccaagatagt 7035619  T
Q  150 ttataaaa 157  Q
    ||||||||    
T  7035620 ttataaaa 7035627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 5745768 - 5745873
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata-aaaccacttatagcaaatacaaaa 178  Q
    ||||||||||||||||||||| ||||||||||| |||| || || |  ||| ||||| ||| || |||||||||| |||  |||||||||| ||| ||||    
T  5745768 ttatgaaaacagcttatgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttatagaaataacttatagcatataaaaaa 5745867  T
Q  179 acaatt 184  Q
    ||||||    
T  5745868 acaatt 5745873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 9174949 - 9174808
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| ||||||||||| | ||||||| |||  |    ||| | |||||| ||||||||| | |||||||||  |||||||||||  |||||    
T  9174949 ttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttcataagctattttcagcttattttcat 9174850  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaata 173  Q
    ||| ||| ||||||||||||| |||||  ||||||| |||||    
T  9174849 aagctctgtaagatagcttatgaaaacagcttatagtaaata 9174808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 33319752 - 33319903
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||| |||||||||||||||| |  |||||| |||  || ||||| |  ||| |||||||||||  ||| |||||| ||||||||||||  |||||    
T  33319752 ttgagcttgtctactggcataagttgt--gagactgtttgggagaacttttataaatagcttatgaca--tttaataagcttttttcagcttattttcat 33319847  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| ||||||| |||| |||||   |||||| | ||||||||||| |||||    
T  33319848 aagttctccaagatagtttatgaaaacagtttatagtatatacaaaaacagtttaa 33319903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 4607059 - 4606939
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||    ||||||||| ||||||| |||  || ||||| |||||||| ||||||||| | ||||| |||   ||| ||||||  |||||    
T  4607059 ttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctgcttttagcttattttcat 4606960  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||||| ||||||||||||    
T  4606959 aagttctccaagatagcttat 4606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 13325704 - 13325596
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||| | ||  ||||||||||||||| | ||   || ||||| |||||||||||||||||| ||  ||||||| |||||||||| |  |||||    
T  13325704 ttgagcttatcaattgatataagttttatgagattgttcgggagaacttttgaaaacagcttatgacatttcacataagcttttttcagctcattttcat 13325605  T
Q  133 aagttctct 141  Q
    |||||||||    
T  13325604 aagttctct 13325596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 27317513 - 27317449
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatg 97  Q
    |||||||||||||| | |||||||||||||||||| |||  || |||||||||||||| ||||||    
T  27317513 ttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 30331882 - 30331806
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 112  Q
    ||||||||||||| |||||||||| ||||||| |||  || |||||||||||| | ||||||||| |||||| ||||    
T  30331882 agcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcacaagc 30331806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 10619156 - 10619279
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| |||||||||| || ||||||| |||||| | ||  || |||| |||||||||||||||| || |||||   ||| ||||||||||||  |||||    
T  10619156 ttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcat 10619255  T
Q  133 aagttctctaagatagcttataaa 156  Q
    |||| ||| ||  |||||||||||    
T  10619256 aagtactccaatctagcttataaa 10619279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 42659147 - 42659214
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 100  Q
    |||||||||| |||||||||||||||| ||||||| |||  || || || ||||||||||||||||||    
T  42659147 ttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatgaca 42659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 31561678 - 31561792
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| |||||||||  |||||||||| | | ||| |||  |||||||| |||||||||| ||||||  ||||||||||  | ||| ||||||  |||||    
T  31561678 ttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacagcatatgacgtttttcataagattgtttaagcttactttcat 31561777  T
Q  133 aagttctctaagata 147  Q
    |||||||| ||||||    
T  31561778 aagttctccaagata 31561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 42419927 - 42419853
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttca 107  Q
    ||||| |||||| ||| |||||||||| ||||||| |||  || |||||| ||||||||||||||||| ||||||    
T  42419927 ttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttca 42419853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 7928234 - 7928351
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatg-acacttttcataagcctttttcagcttaaattca 131  Q
    ||||||||||||| || |||||||| | ||||||| ||    | ||||| ||||||||||||||| ||| | ||||||||   |||||||||||  ||||    
T  7928234 ttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcataagttgttttcagcttattttca 7928333  T
Q  132 taagttctctaagatagc 149  Q
    ||||||||| ||||||||    
T  7928334 taagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 20926577 - 20926516
Alignment:
Q  93 ttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 154  Q
    |||||||| ||||||| ||| ||||||| ||||  |||||||||||||||| ||||||||||    
T  20926577 ttatgacaattttcattagcttttttcaacttattttcataagttctctaatatagcttata 20926516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 40279285 - 40279176
Alignment:
Q  79 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 177  Q
    |||||||||||| |||||| || | ||||||| |  ||||||||| |  ||||||||||||| || ||||||||| ||||| ||||||| |  |||| ||    
T  40279285 cttatgaaaacaacttatggcattgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttataccaa 40279186  T
Q  178 aacaatttaa 187  Q
    ||||||||||    
T  40279185 aacaatttaa 40279176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 43036690 - 43036574
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| |  |||||||||| ||||| | |||  |||||||||||| |||| ||||||||| | |||||||  || ||| ||||||  |||||    
T  43036690 ttgagcttatctagttacataagttttgtgagagtatttgggaaaacttatgagaacatcttatgacattattcataa-actgttttagcttactttcat 43036592  T
Q  133 aagttctctaagatagct 150  Q
    ||||| || |||||||||    
T  43036591 aagttttccaagatagct 43036574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 2142788 - 2142640
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||||||  ||||||||||||||||||| |||  || ||||||||||||||  || ||||| | ||||| |||  |||| ||||||  |||||    
T  2142788 ttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctgtttttagcttattttcat 2142689  T
Q  133 aagttct-ctaagatagcttat-aaaaccacttatagcaaatacaaaaa 179  Q
    || |||| | ||||||  |||| ||||| |||||||||  |||||||||    
T  2142688 aaattctcccaagataaattatgaaaacaacttatagcttatacaaaaa 2142640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 15305808 - 15305701
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| || |||||||||| ||| ||| |||   | ||||| ||| |||| |||||| || ||||||||||  ||||||| ||||  |||||    
T  15305808 ttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcataagtttttttcaacttattttcat 15305709  T
Q  133 aagttctc 140  Q
    ||||||||    
T  15305708 aagttctc 15305701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 16451208 - 16451133
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 152  Q
    |||||||||||||| ||||||||| | ||||| |||  |||||||||||  ||||  ||||||| |||||||||||    
T  16451208 aacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagctta 16451133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 26626963 - 26626852
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 175  Q
    |||||| ||||| ||||||||||| | ||||||| |  ||||||| |||  ||||||||||||  |||||||||||| |||||  ||| ||||  ||||     
T  26626963 aacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacg 26626864  T
Q  176 aaaacaatttaa 187  Q
    ||||||||||||    
T  26626863 aaaacaatttaa 26626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 33192291 - 33192209
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca 160  Q
    ||||||||||||||| |||||||| | | |||||||  ||||||||||| ||| ||||| |||| | |||||||||| ||||||    
T  33192291 aacttatgaaaacagtttatgaca-tatccataagctgttttcagcttatatttataagctctccaggatagcttatgaaacca 33192209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 2227248 - 2227194
Alignment:
Q  85 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttct 139  Q
    |||||||||||||||| ||||||||| | ||||||||||||  ||| ||||||||    
T  2227248 aaaacagcttatgacatttttcataaacatttttcagcttattttcgtaagttct 2227194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 42458076 - 42457962
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    |||| |||||||||||||||| ||||| | |||  || |  ||||||||||| ||||  ||| |||  |||||   |||||||||||  |||||| ||||    
T  42458076 ttatttactggcataagttttgtgagagtgtttaggagagtttatgaaaacaacttaaaacattttcaataagttgttttcagcttattttcatatgttc 42457977  T
Q  139 tctaagatagcttat 153  Q
    |||||||||||||||    
T  42457976 tctaagatagcttat 42457962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 43570503 - 43570446
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||||||||||||||||||||| | |||||||| |||||| ||||||  ||||||||    
T  43570503 aacttatgaaaacagcttatgacattgttcataag-cttttttagcttattttcataag 43570446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 1647325 - 1647249
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 154  Q
    |||||||||||||||||||||||| |  ||||||||  |||||||||||  | |||||| ||||||  ||||||||||    
T  1647325 aacttatgaaaacagcttatgaca-tgctcataagctgttttcagcttatttccataagctctctataatagcttata 1647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 12289879 - 12289774
Alignment:
Q  85 aaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaata-caaaaacaa 182  Q
    ||||||| |||||||| | ||||||||| ||||||| ||||  ||||||||||||| || |||  |||| ||||| ||||||| ||  || |||||||||    
T  12289879 aaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttataacatgtaccaaaaacaa 12289780  T
Q  183 tttaat 188  Q
    ||||||    
T  12289779 tttaat 12289774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 152
Target Start/End: Original strand, 23974435 - 23974547
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc 138  Q
    |||||||||| ||| || ||  ||||| | |||| || |||||||||||||||||||||||| |||||| |||  |||||  ||| |  |||||||||||    
T  23974435 ttatctactgacatgagattagtgagattgttttggagaacttatgaaaacagcttatgacaattttcacaag-tttttttggctcattttcataagttc 23974533  T
Q  139 tctaagatagctta 152  Q
    || || ||||||||    
T  23974534 tcaaatatagctta 23974547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 26143578 - 26143696
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||| ||||| ||||  |||||| |||  || |||||| ||||||| |||||| || | |||| | |   |||||||||||  |||||    
T  26143578 ttgagcttatctactgacataaatttt--gagactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggttattttcagcttattttcat 26143675  T
Q  133 aagttctctaagatagcttat 153  Q
    |||||||| ||| ||||||||    
T  26143676 aagttctccaagttagcttat 26143696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 36534902 - 36534781
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||| | ||  |||||||||| ||||||| |||  || |||||||||||||||||||| | | | ||||||| |  |||||||||||  |||||    
T  36534902 ttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataatctattttcagcttattttcat 36534803  T
Q  133 aagttctctaagatagcttata 154  Q
     | |||||  | ||||||||||    
T  36534802 taattctcctatatagcttata 36534781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 38916245 - 38916330
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 118  Q
    ||||||||||||||  ||||| ||||| ||||  | |||  || |||||||||||| |||||| | |||||||||||||| |||||    
T  38916245 ttgagcttatctaccagcataggttttgtgaggttgtttaggagaacttatgaaaaaagcttacgccacttttcataagctttttt 38916330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 7033238 - 7033306
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacac 101  Q
    |||||||||| ||||  |||||||||||||| ||| |||   | |||||||||||||| ||||||||||    
T  7033238 ttgagcttatatactaacataagttttatgatactgtttaaaagaacttatgaaaacaacttatgacac 7033306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 36043996 - 36043924
Alignment:
Q  75 aaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagata 147  Q
    |||||||||||||||| |||| |||| | |||||||||  |||| |||| || |||||||| |||| ||||||    
T  36043996 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctctccaagata 36043924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 39073684 - 39073780
Alignment:
Q  92 cttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacc-acttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||| ||||||||||  |  |||| ||||  ||||  ||||||| || |||||||||||||   |||||||||| |||||||||||||||||    
T  39073684 cttatgacaattttcataagtttcgttcaacttattttcactagttctccaatatagcttataaaaattacttatagcatatacaaaaacaatttaa 39073780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 41407392 - 41407280
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatac- 174  Q
    ||||||| ||||| ||||||| || ||||||||||| | ||| || |||  |||| |||||||| |||| | ||||| ||||  |||||||||| ||||     
T  41407392 aacttattaaaacggcttatggcatttttcataagcttgtttaaggttattttcacaagttctcaaagaaaacttataaaaataacttatagcatataca 41407293  T
Q  175 aaaaacaatttaa 187  Q
    |||||||||||||    
T  41407292 aaaaacaatttaa 41407280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 2295230 - 2295106
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||||||||||||||| ||||||| |||  || |||||||||||||||||||||||| |||||||||||  | |||| ||||  ||||     
T  2295230 ttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagctctattcaacttattttcac 2295131  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    ||||||||| | |||||||||||||    
T  2295130 aagttctctgatatagcttataaaa 2295106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 49938867 - 49938734
Alignment:
Q  47 tggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagat 146  Q
    ||||||||||||| ||||| | |||  || |||||||||||||||||||||||| |||||| |||| ||||||| ||||  |||||||||||||||| ||    
T  49938867 tggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaacttattttcataagttctctaatat 49938768  T
Q  147 agcttat-aaaaccacttatagcaaatacaaaaa 179  Q
    ||||||| ||||| ||||||| || |||||||||    
T  49938767 agcttataaaaacaacttataacatatacaaaaa 49938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 3233951 - 3234106
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| || | |||||||| ||||||| ||   || |||||||||||||| ||||| ||| ||||||||||  ||||||  ||||  |||||    
T  3233951 ttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagtttttttctacttattttcat 3234050  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| || ||||||||| ||||| |||||||||| |||||||||||||||||    
T  3234051 aagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatttaa 3234106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 187
Target Start/End: Complemental strand, 13810128 - 13809977
Alignment:
Q  37 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 136  Q
    |||||||||||| | |||||||| |||||||||||| || |||||||||| |||| |||||||| |||||| |||  ||| | ||||||  |||| ||||    
T  13810128 gcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagtttttcttagcttattttcacaagt 13810029  T
Q  137 tctctaagatagcttataaaaccact-tatagcaaatacaaaaacaatttaa 187  Q
    ||||||| |||| |||||||| || | ||||||| |||||||||||||||||    
T  13810028 tctctaatatagtttataaaaacaatatatagcatatacaaaaacaatttaa 13809977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 14576590 - 14576744
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||||||||||||| ||| |||| ||  ||| |||  || ||||| |||||||||||||||||| |||||| |||| ||||||||||||  ||||     
T  14576590 ttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagcttttttcagcttattttca- 14576688  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||||||||| ||||||||| ||||  | |||||||| |||||||||||||||||    
T  14576689 aagttctctaatatagcttataaaaaaaaattatagcatatacaaaaacaatttaa 14576744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 29904885 - 29904761
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||||| ||||||||||| ||||||| |||  || ||||||| ||||||||||||| || |||||| |||| ||||||| ||||  |||||    
T  29904885 ttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttattttcat 29904786  T
Q  133 aagttctctaagatagcttataaaa 157  Q
    ||||||| ||| |||| ||||||||    
T  29904785 aagttctataatatagtttataaaa 29904761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 15477655 - 15477578
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 154  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||| ||| ||||||    
T  15477655 aacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctctaatataacttata 15477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 187
Target Start/End: Original strand, 17603339 - 17603475
Alignment:
Q  52 taagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctt 151  Q
    ||||||||| |||||| ||   || |||||| ||||||||||||||||| ||||||||| | |||| || ||||  |||| |||||||| || |||||||    
T  17603339 taagttttacgagactattagggagaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagctt 17603438  T
Q  152 at-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    || ||||| |||||||||| |||||||||||||||||    
T  17603439 ataaaaacaacttatagcatatacaaaaacaatttaa 17603475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 24915034 - 24915142
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaa 178  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||||  |||| |||||||| |||| ||||||| |||||  ||||||||| ||||||||    
T  24915034 ttatgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaa 24915133  T
Q  179 acaatttaa 187  Q
    |||||||||    
T  24915134 acaatttaa 24915142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 37631536 - 37631649
Alignment:
Q  74 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaat 172  Q
    ||||||||||||||||||||| ||||| |||||| |||| ||||||||||||  ||||||||||||| || |||||||| |||| || || ||| || |     
T  37631536 gaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcatac 37631635  T
Q  173 acaaaaacaattta 186  Q
    ||||||||||||||    
T  37631636 acaaaaacaattta 37631649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 6557106 - 6556950
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataa-gcctttttcagcttaaattca 131  Q
    |||| ||||||||||  |||||||||| ||||||| |||  || |||||||||||| ||||||||||| |||||| || |  ||||| ||||||   |||    
T  6557106 ttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatgacagttttcaaaaggttttttttagcttattgtca 6557007  T
Q  132 taagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| ||| ||| ||||| ||||| ||||||| || |||||||||||||||||    
T  6557006 taagttctttaatataacttataaaaacaacttataacatatacaaaaacaatttaa 6556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 188
Target Start/End: Original strand, 27970243 - 27970387
Alignment:
Q  46 ctggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt-ctctaag 144  Q
    |||||||||||||| ||| |||||||  || ||||||| ||||| | |||||||| ||||||||||| |||||||| |||  |||||||||| | | ||     
T  27970243 ctggcataagttttgtgatactctttgggagaacttataaaaacggtttatgacatttttcataagcttttttcagtttattttcataagttccccaaaa 27970342  T
Q  145 atagcttat-aaaaccacttatagcaaatacaaaaacaatttaat 188  Q
    |||| ||||  |||| |||||||||| ||||||||||||||||||    
T  27970343 atagtttatggaaacaacttatagcatatacaaaaacaatttaat 27970387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 187
Target Start/End: Complemental strand, 27976725 - 27976574
Alignment:
Q  45 actggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat---------aag 135  Q
    |||| |||||||||| | ||||| |||  |||||||| |||||| ||||||||||| ||||||||||| ||||||||||||  |||||         |||    
T  27976725 actgacataagttttgttagactgtttg-gaaaacttttgaaaatagcttatgacatttttcataagcttttttcagcttattttcattatttcattaag 27976627  T
Q  136 ttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||||| |||||||||||| ||||| |||||||||| |||||||||||||||||    
T  27976626 ttctcgaagatagcttatgaaaacaacttatagcatatacaaaaacaatttaa 27976574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 30286499 - 30286611
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaa-atac 174  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| || || ||  | ||||||  || ||||||||| ||||| ||||||||||| ||||    
T  30286499 aacttatgaaaacagcttatgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaacaacttatagcaacatac 30286598  T
Q  175 aaaaacaatttaa 187  Q
    |||||||||||||    
T  30286599 aaaaacaatttaa 30286611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 473297 - 473143
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||| |||||||||||||||||| | ||| ||  |||  || |||||||||||| ||||||| ||| ||||||||||| ||||||| ||||  |||||    
T  473297 ttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat-acaattttcataagcttttttcaacttattttcat 473199  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||| || | | ||||| ||||| |||||||||| | || ||||||||||||    
T  473198 aagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaa 473143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 2778022 - 2777874
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||||||| | ||||||||||| ||||||| |||  || ||||||||||| || ||||||||  | |||||||||| |||||||||||  ||||||||    
T  2778022 agcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaaccaacttatgac-gtattcataagccgttttcagcttattttcataag 2777924  T
Q  136 ttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaatt 184  Q
    ||||| ||| || |||| ||||||  ||||||||  ||||||| ||||||    
T  2777923 ttctccaagttaacttattaaaacagcttatagcttatacaaagacaatt 2777874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 169
Target Start/End: Original strand, 43230708 - 43230843
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||| ||||||||||||||||||| |||| | |||  || || ||||||||||||||  ||||| |||| |||||| ||||||| ||||  |||||    
T  43230708 ttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagct--tgacagtttttataagcttttttcaacttattttcat 43230805  T
Q  133 aagttctctaagatagcttataa-aaccacttatagca 169  Q
     ||||||| || ||||| ||||| ||| ||||||||||    
T  43230806 tagttctccaatatagcctataagaacaacttatagca 43230843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 51688782 - 51688685
Alignment:
Q  89 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta-taaaaccacttatagcaaatacaaaaacaattta 186  Q
    ||||||||||||||||||| |||  ||||||||||||| |||||||| |||| | |||||||||  ||||| ||||||||||  |||||||||||||||    
T  51688782 cagcttatgacacttttcagaagtttttttcagcttaatttcataag-tctccacgatagcttacgaaaacaacttatagcatgtacaaaaacaattta 51688685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 5721059 - 5720935
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataag-cctttttcagcttaaattca 131  Q
    ||||||||| ||||| ||||||||||| |  |||| |||  || ||||||||||||||||||||||||  |||||||||   |||||||||| |  ||||    
T  5721059 ttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatgaca-atttcataagtattttttcagctgattttca 5720961  T
Q  132 taagttctctaagatagcttataaaa 157  Q
    || ||||||||| |||||||||||||    
T  5720960 tatgttctctaatatagcttataaaa 5720935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 51929524 - 51929628
Alignment:
Q  82 atgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaac 180  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||  | ||||||||||| || |||| |||||||| || ||||  ||| ||| ||||||    
T  51929524 atgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaacagcttaaggcatatataaaaac 51929623  T
Q  181 aattt 185  Q
    |||||    
T  51929624 aattt 51929628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 37473493 - 37473418
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 152  Q
    ||||| |||||||| ||||||||| ||||||||||| |||| |||||||  ||||||||||||| |||||| ||||    
T  37473493 aacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaagataactta 37473418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 42575405 - 42575492
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 120  Q
    ||||||||||||||| |||||| |||| |||| || |||  ||||| |||| |||||| ||||||||| ||||||||||| |||||||    
T  42575405 ttgagcttatctactagcataaattttgtgaggctgtttgagaaaatttataaaaacaacttatgacagttttcataagcttttttca 42575492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 5741740 - 5741616
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt-cagcttaaattca 131  Q
    ||||||||| ||||| ||||||||||| |   ||| |||  || |||||||||||||| ||||||||| ||| ||||||  ||||| ||||| |  ||||    
T  5741740 ttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgacaattt-cataagtattttttcagctgattttca 5741642  T
Q  132 taagttctctaagatagcttataaaa 157  Q
    |||||||||||| |||||||||||||    
T  5741641 taagttctctaatatagcttataaaa 5741616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 41195132 - 41195284
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    |||||||| |||||||||||||||| |  || ||| |||  || ||||| |  ||| ||||||||||| |||| |||||| ||||||||||||  |||||    
T  41195132 ttgagcttgtctactggcataagttgt--gatactgtttgggagaacttttataaatagcttatgaca-ttttaataagcttttttcagcttattttcat 41195228  T
Q  133 aagttctctaagatagcttataaaaccactt-atagcaaatacaaaaacaatttaa 187  Q
    |||||||| ||||||| |||| ||| || || |||| | ||||||||||| |||||    
T  41195229 aagttctccaagatagtttatgaaaacagttgatagtatatacaaaaacagtttaa 41195284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 42174933 - 42174841
Alignment:
Q  89 cagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaac 180  Q
    |||||||||||| |||||||||||  |||| | ||||  ||||||||||||| || ||| ||||| ||||| |||||||||| ||||||||||    
T  42174933 cagcttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatatacaaaaac 42174841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 36872845 - 36872716
Alignment:
Q  50 cataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 149  Q
    ||||||||||  |||||| |||| || || ||||||||||   |||||||| |||| |||||| ||||||| ||||  ||||||||||||  || |||||    
T  36872845 cataagttttgcgagactgttttggagaatttatgaaaac---ttatgacaattttgataagc-tttttcaacttattttcataagttctgcaatatagc 36872750  T
Q  150 ttataaaacca-cttatagcaaatacaaaaacaa 182  Q
    || ||||| || ||||||||| ||||||||||||    
T  36872749 ttgtaaaaacaacttatagcacatacaaaaacaa 36872716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 37517102 - 37517189
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttca 120  Q
    |||||||||| |||| ||||||||||| ||||||| | |   | |||||| ||||||||||||||||| |||||| |||| |||||||    
T  37517102 ttgagcttatatacttgcataagttttgtgagactgtatgaaagaacttacgaaaacagcttatgacaattttcaaaagcttttttca 37517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 38001729 - 38001639
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctt 124  Q
    ||||| ||||| |||| |||||||||| ||||||| |||  || ||||||||||||||||||||||| || ||||||||   ||||||||||    
T  38001729 ttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatgac-ctgttcataagttgttttcagctt 38001639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 41184630 - 41184741
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacc-acttatagcaaataca 175  Q
    |||||||||||| ||||||||||| ||||||||||  ||||||| ||||  |||||||||| || || || |  ||||||||| | |||||  | |||||    
T  41184630 aacttatgaaaatagcttatgacaattttcataagtttttttcaacttattttcataagttttccaatatggtatataaaaccaaattataatatataca 41184729  T
Q  176 aaaacaatttaa 187  Q
    ||||||||||||    
T  41184730 aaaacaatttaa 41184741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 27820156 - 27820253
Alignment:
Q  56 ttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttata 154  Q
    |||| ||||||| |||| || || ||||||||| ||||||| ||| | |||||||||  |||||||||||  ||||||| |||| ||||||||||||||    
T  27820156 ttttgtgagactgttttggagaatttatgaaaa-agcttattacattgttcataagctattttcagcttattttcataaattctttaagatagcttata 27820253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 147
Target Start/End: Original strand, 38018304 - 38018414
Alignment:
Q  37 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 136  Q
    ||||||||||||||||||||||| |||||||  ||  |||||||||||||| ||| ||| |||| | ||||| ||   |||||||||||  ||||| | |    
T  38018304 gcttatctactggcataagttttgtgagactggttgggaaaacttatgaaagcagattaggacattgttcattaggtattttcagcttattttcatgaat 38018403  T
Q  137 tctctaagata 147  Q
    |||| ||||||    
T  38018404 tctccaagata 38018414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 27146191 - 27146315
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaa-aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 131  Q
    ||||||||||||| ||||||||||||| ||||||| | || ||| |||||| | ||||| ||||||||| | |||||||||  |||||| ||||  |||     
T  27146191 ttgagcttatctattggcataagttttgtgagact-tgttggaagaacttaaggaaacaacttatgacattgttcataagctgttttcaacttactttcg 27146289  T
Q  132 taagttctctaagatagcttataaaa 157  Q
    ||||||||  ||||||| ||| ||||    
T  27146290 taagttcttcaagatagtttacaaaa 27146315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 27820330 - 27820427
Alignment:
Q  90 agcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaattta 186  Q
    |||||| |||| | |||||||||  |||||||||||  ||||||| ||||| |||||||||||||||| || | ||||||  ||||| ||||||||||    
T  27820330 agcttacgacattgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaattta 27820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 38503445 - 38503518
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagct 150  Q
    |||||||| ||||||| ||||||| | ||||||||   |||||||||||  ||||||||||||| |||||||||    
T  38503445 aacttatggaaacagcctatgacattgttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 179
Target Start/End: Original strand, 40977383 - 40977487
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca--cttatagcaaatac 174  Q
    ||||||||||||||  |||||||| |||||| |||| |||| |||||||  |||||| ||||||| | || ||||||||||  |  ||||||||| ||||    
T  40977383 aacttatgaaaacaatttatgacaattttcaaaagctttttccagcttattttcatatgttctcttatatggcttataaaattaaccttatagcatatac 40977482  T
Q  175 aaaaa 179  Q
    |||||    
T  40977483 aaaaa 40977487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 47432160 - 47432075
Alignment:
Q  102 ttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||| |||| ||||||||||||  ||||||| ||||  || ||| ||||||||||  ||||||||| || ||||||||||||||    
T  47432160 ttttcacaagcttttttcagcttattttcataaattcttcaatataacttataaaacaccttatagcatattcaaaaacaatttaa 47432075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 184
Target Start/End: Complemental strand, 1432649 - 1432497
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||| || | ||||| |||| ||||||| |||   | |||||||||||| ||| ||||||| | |||||||| | |  | ||||||  |||||    
T  1432649 ttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacattgttcataagacatacttagcttactttcat 1432550  T
Q  133 aagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 184  Q
    |||||||| ||||||| |||| ||||| | |||||||  ||| ||||||||||    
T  1432549 aagttctccaagatagtttatgaaaacaatttatagcttataaaaaaacaatt 1432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 7136979 - 7137054
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    ||||||||||||  |||||||||| | ||||||||   |||||||||||  ||||||||||||| ||||||||||||    
T  7136979 aacttatgaaaatcgcttatgaca-tattcataagttattttcagcttattttcataagttctccaagatagcttat 7137054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 179
Target Start/End: Complemental strand, 14332112 - 14331970
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    ||||||||||||| |||| ||||| ||||||| ||   |  ||||||||||||||  ||||||||| |||| | ||| ||||||||||||| |||| |||    
T  14332112 agcttatctactgtcatatgttttgtgagactgttcgggtgaacttatgaaaacaaattatgacac-tttcgttagcttttttcagcttaatttca-aag 14332015  T
Q  136 ttctctaagatagc-ttataaaaccacttatagcaaatacaaaaa 179  Q
    | ||| |||||||| ||   |||| |||||||||| |||||||||    
T  14332014 tcctccaagatagcatttggaaacaacttatagcatatacaaaaa 14331970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 14385729 - 14385781
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatga 85  Q
    ||||||||||||||||||||||||||  ||||||| |||| || |||||||||    
T  14385729 ttgagcttatctactggcataagtttcgtgagactattttggagaacttatga 14385781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 33186426 - 33186318
Alignment:
Q  47 tggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgac-acttttcataagcctttttcagcttaaattcataagttctctaaga 145  Q
    ||||||||||||| ||||||| | |  || ||||||||||||| | ||||||| | |||||| |||| ||||||||||||  |  ||||||||||||| |    
T  33186426 tggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgacaatttttcaaaagcttttttcagcttatttatataagttctctaata 33186327  T
Q  146 tagcttata 154  Q
    ||| |||||    
T  33186326 tagattata 33186318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 37842336 - 37842427
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagc 168  Q
    |||||||||||||| || |||||| | |||||||||  |||||||||||  || |||||||||  |||||||||||| ||||| |||||||||    
T  37842336 aacttatgaaaacatctaatgaca-tgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagc 37842427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 38247461 - 38247397
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatg 97  Q
    |||| |||||||||||||||||||||| ||  ||| |||  || |||||||||||||||||||||    
T  38247461 ttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 37617401 - 37617480
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 112  Q
    ||||| ||||||| || | |||||||| ||||||| ||| ||| || ||||||||||||||| |||||  ||||||||||    
T  37617401 ttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagcttttgacaaatttcataagc 37617480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 39596633 - 39596578
Alignment:
Q  131 ataagttctctaagatagcttataaaacca-cttatagcaaatacaaaaacaattt 185  Q
    ||||| |||| ||||||||||||||||||| ||||||||  |||||||||||||||    
T  39596633 ataagctctccaagatagcttataaaaccatcttatagcttatacaaaaacaattt 39596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 52863290 - 52863365
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataag 111  Q
    ||||||||||||||||||| |||| || |||| |||  || |||||||| ||| ||||||||||| ||||| ||||    
T  52863290 agcttatctactggcataatttttgtgtgactgtttcggagaacttatggaaaaagcttatgacatttttcttaag 52863365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 49888819 - 49888749
Alignment:
Q  115 ttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 184  Q
    ||||| |||||  |||||||||||||||||||||||||| ||||| ||| |||||  |||| |||||||||    
T  49888819 ttttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaatt 49888749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 36872352 - 36872299
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcata 133  Q
    ||||||||||||||||| | | ||||||||||| ||||||| ||||| ||||||    
T  36872352 ttatgaaaacagcttattataattttcataagcttttttcaacttaatttcata 36872299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 3887612 - 3887692
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaa 157  Q
    |||||||||||||| ||||||||| | |||||||||  |||| | ||||  |||||||||||||  || |||||| |||||    
T  3887612 aacttatgaaaacatcttatgacattgttcataagctgtttttaacttattttcataagttctcctagctagcttgtaaaa 3887692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 7119877 - 7119972
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||| |||| ||||||||||| ||||||| ||| | | || ||||||||||| ||||||| | | |||||||||   |||||||||| ||||||    
T  7119877 agcttatatactagcataagttttgtgagactgtttgcaagaatttatgaaaacaacttatgata-tcttcataagctgctttcagcttatattcat 7119972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 10199389 - 10199464
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    |||| ||||||| ||||||||||| | ||||||||   |||||||||||  |||||||| ||||||| |||||||||    
T  10199389 aactcatgaaaatagcttatgaca-tgttcataagttgttttcagcttattttcataagctctctaaaatagcttat 10199464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 10744390 - 10744315
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    ||||| ||||||||||||||| || | |||||||||  |||||| ||||  || ||||||||||||||| |||||||    
T  10744390 aacttgtgaaaacagcttatggca-tgttcataagctgttttcatcttatttttataagttctctaagacagcttat 10744315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 33204330 - 33204382
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatga 85  Q
    |||||||||||||||| |||||||||| ||||||| |||  || |||||||||    
T  33204330 ttgagcttatctactgacataagttttgtgagactgtttgggagaacttatga 33204382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 152
Target Start/End: Original strand, 38116013 - 38116133
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcga-aaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 131  Q
    |||||||||||||||| | |||||||| ||||||  |||| || |||  || ||||| ||||||||||| | ||| ||||   ||| |||||||  ||||    
T  38116013 ttgagcttatctactgacgtaagttttgtgagacggttttggagaaaaataagaaaatagcttatgacattgttcctaagttgtttccagcttactttca 38116112  T
Q  132 taagttctctaagatagctta 152  Q
    ||||||||| |||||| ||||    
T  38116113 taagttctccaagataactta 38116133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 45975776 - 45975704
Alignment:
Q  81 tatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    |||||||||||  ||| ||| | |||||||||  |||||||||||  ||||||| ||||| ||||||||||||    
T  45975776 tatgaaaacagtgtataacattattcataagctgttttcagcttattttcataaattctccaagatagcttat 45975704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 51695475 - 51695551
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    |||||||  ||||| ||||| ||| | |||||||||  |||||||||||  ||||||| ||||| ||||||||||||    
T  51695475 aacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttat 51695551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 31813291 - 31813175
Alignment:
Q  37 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 136  Q
    |||||| |||||||||||||||| ||||||| |||  || ||||||||||||  |||||||| | | |||||||||| |||||||||||  |||||| ||    
T  31813291 gcttatttactggcataagttttgtgagactatttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcatatgt 31813192  T
Q  137 tctctaagatagcttat 153  Q
    |||| ||||||||||||    
T  31813191 tctccaagatagcttat 31813175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 34430447 - 34430550
Alignment:
Q  83 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaaca 181  Q
    |||||||||||||||||| || |||||||| ||||||||||||  ||||||| ||||| |||||||||||| |||||  |||||| || |||||||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaaca 34430546  T
Q  182 attt 185  Q
    ||||    
T  34430547 attt 34430550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 9763644 - 9763574
Alignment:
Q  83 tgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat 153  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||  || |||||||||    
T  9763644 tgaaaacagcttatgacacttttgataagcttttttcaacttaatttcataagttctacaatatagcttat 9763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 20368127 - 20368268
Alignment:
Q  43 ctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctcta 142  Q
    |||||| |||||||||| | ||||| |||  || |||||||||||||| ||||||||| | |||||||||   ||||| ||||  ||||||||||||| |    
T  20368127 ctactgacataagttttgtaagactatttgggagaacttatgaaaacaacttatgaca-tgttcataagctagtttcaacttattttcataagttctcca 20368225  T
Q  143 agatagcttat-aaaaccacttatagcaaatacaaaaacaatt 184  Q
    ||| ||||||| ||||| ||||||| |  ||||||||||||||    
T  20368226 agaaagcttatgaaaacaacttataactcatacaaaaacaatt 20368268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 24982834 - 24982696
Alignment:
Q  38 cttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagtt 137  Q
    ||||||||||  |||||||||| ||||||| |||| || ||| | ||| |||||||||||||| |||| || ||| ||||| ||||||   |||||||||    
T  24982834 cttatctactaacataagttttgtgagactgttttggagaacatttgagaacagcttatgacatttttaatgagctttttttagcttaccctcataagtt 24982735  T
Q  138 ctctaagatagcttat-aaaaccacttatagcaaataca 175  Q
    ||| || ||| ||||| |||||  ||||||||| |||||    
T  24982734 ctccaaaataacttatgaaaacagcttatagcatataca 24982696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 848122 - 848022
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||||||||||| | ||||||||||| ||||||| |||   | ||||||| ||||| |||||||||| ||||| ||||| ||||||||||||  |||||    
T  848122 ttgagcttatcta-tagcataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttcttaagcttttttcagcttattttcat 848024  T
Q  133 aa 134  Q
    ||    
T  848023 aa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 9093538 - 9093647
Alignment:
Q  79 cttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaa 177  Q
    |||||||||| ||||||||||| | || |||| |  |||||||||||  ||| |||||||||||||| ||||||| |||||  ||||||||  |||| ||    
T  9093538 cttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaa 9093637  T
Q  178 aacaatttaa 187  Q
    ||||||||||    
T  9093638 aacaatttaa 9093647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 4163287 - 4163215
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacactttt 105  Q
    |||||||||||||||||||||||||||| |||||| ||   || ||| |||||||||| ||||||||| ||||    
T  4163287 ttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttt 4163215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 4224908 - 4224836
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacactttt 105  Q
    |||||||||||||||||||||||||||| |||||| ||   || ||| |||||||||| ||||||||| ||||    
T  4224908 ttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttt 4224836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 2735159 - 2735048
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaataca 175  Q
    ||||||||||||| |||||||||| |||||||||||  ||||| |||||  |||||||||| |  ||||| |||||| |||||  |||||||   |||||    
T  2735159 aacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattataca 2735060  T
Q  176 aaaacaatttaa 187  Q
    |||| |||||||    
T  2735059 aaaataatttaa 2735048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 6536680 - 6536597
Alignment:
Q  102 ttttcataagcctttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatt 184  Q
    ||||||||||| ||||||| ||||  ||||||| ||||| || ||||||| | ||||| |||||||||| ||||||||||||||    
T  6536680 ttttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagcatatacaaaaacaatt 6536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 6909892 - 6909963
Alignment:
Q  117 ttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||||| ||||||| ||||| ||||||  |||| ||||| |||||||||| |||||||||||||||||    
T  6909892 ttcagcttaatttcataaattctccaagatatgttatgaaaacaacttatagcatatacaaaaacaatttaa 6909963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 9912131 - 9912234
Alignment:
Q  37 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagt 136  Q
    ||||||||||||  |||||||||  | |||| |||  || ||||||||||| |||||||||||| | |||||||||  |||| ||||||  |||||||||    
T  9912131 gcttatctactgatataagttttgggcgactgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagt 9912230  T
Q  137 tctc 140  Q
    ||||    
T  9912231 tctc 9912234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 24626422 - 24626274
Alignment:
Q  32 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattca 131  Q
    |||||||||||||| |  ||| || ||| ||||| | |||  |||||||| ||||||||||||||||| || ||||||| | ||||||||||            
T  24626422 attgagcttatctagtaacatcagctttgtgagaatgtttgggaaaacttttgaaaacagcttatgacgctcttcataaacttttttcagct-------- 24626331  T
Q  132 taagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    ||| | ||| |||||||||||| ||||| |||||||| | |||||||||||||||||    
T  24626330 taattactccaagatagcttatgaaaacaacttatagaatatacaaaaacaatttaa 24626274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 30926653 - 30926578
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcat 108  Q
    |||||||||| | ||||||||| ||| |||||||| |||   | |||||||||||||||||||||||| |||||||    
T  30926653 ttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgacaattttcat 30926578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 35070630 - 35070708
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataa 155  Q
    |||||| ||||||||||||||||| |||||| |||| |||||  ||||   ||||||||||||| || |||||||||||    
T  35070630 aacttacgaaaacagcttatgacaattttcacaagcttttttgggcttgttttcataagttctccaaaatagcttataa 35070708  T

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Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 184
Target Start/End: Complemental strand, 35099152 - 35099019
Alignment:
Q  51 ataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagct 150  Q
    ||||||||| |||| || |||  || || ||| |||||||||| |||||| ||||| ||||  ||||||| ||||  |||| || | |||||||||||||    
T  35099152 ataagttttctgaggctgtttgggagaatttaggaaaacagctaatgacatttttcgtaagt-tttttcaacttattttcaaaaatactctaagatagct 35099054  T
Q  151 tat-aaaaccacttatagcaaatacaaaaacaatt 184  Q
    ||| ||||| ||||||| || ||||||||||||||    
T  35099053 tatgaaaacaacttataacatatacaaaaacaatt 35099019  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 9559357 - 9559437
Alignment:
Q  32 attgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagc 112  Q
    |||||| ||||||| ||||||||||||| ||||||| |||  || || ||||||||||||||||  ||| | |||||||||    
T  9559357 attgagattatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagcttacaacattgttcataagc 9559437  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 18076290 - 18076175
Alignment:
Q  80 ttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttc-----tct--aagatagcttat-aaaaccacttatagcaaa 171  Q
    |||||||| |||||||||||| ||||||| |||  |||||| |||| ||||||||||||     |||  || ||||||||| ||||| |||||||||||     
T  18076290 ttatgaaaccagcttatgacaattttcatgagctgttttcaacttatattcataagttcttagttcttcaatatagcttataaaaacaacttatagcaat 18076191  T
Q  172 tacaaaaacaatttaa 187  Q
    || |||||||||||||    
T  18076190 tagaaaaacaatttaa 18076175  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 30536634 - 30536570
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 100  Q
    ||||||||||||||| |||||||| ||||||| |||  ||  ||||||||||| |||||||||||    
T  30536634 agcttatctactggcgtaagttttgtgagactgtttgggaggacttatgaaaatagcttatgaca 30536570  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 31624179 - 31624108
Alignment:
Q  77 aacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagc 149  Q
    |||||||||||||||||||||||| | |||||||||  |||||| ||||  ||||||| ||||| ||||||||    
T  31624179 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttattttcataatttctccaagatagc 31624108  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 19411491 - 19411577
Alignment:
Q  39 ttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagctta 125  Q
    ||||||||| |||||||||||||  || | |||  || ||||| || ||||||||||||||| || |||||||| |||||| |||||    
T  19411491 ttatctacttgcataagttttatatgaatgtttgggagaacttttgtaaacagcttatgacagttctcataagcttttttcggctta 19411577  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 837234 - 837307
Alignment:
Q  115 ttttcagcttaaattcataagttctctaagatagcttat-aaaaccacttatagcaaatacaaaaacaatttaa 187  Q
    |||||||||||  ||||||||||||| ||||||||| || ||||| |||||||||  | || ||||||||||||    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaa 837307  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 167
Target Start/End: Complemental strand, 13907717 - 13907584
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 132  Q
    ||||| ||||||| |||||||||||||  |||||  |||  || || ||||||||||||||| ||||| | |||| |||   ||||||| |||  |||||    
T  13907717 ttgagtttatctagtggcataagtttt--gagacggtttgagagaatttatgaaaacagcttctgacattgttcacaagttattttcagtttattttcat 13907620  T
Q  133 aagttctctaagatagcttat-aaaaccacttatag 167  Q
    || ||||| ||||| |||||| ||||| ||||||||    
T  13907619 aatttctccaagatggcttatgaaaacaacttatag 13907584  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 33089640 - 33089572
Alignment:
Q  33 ttgagcttatctactggcataagt-tttatgagactcttttcgaaaacttatgaaaacagcttatgaca 100  Q
    |||||||||||||||| |||| || ||| ||||||| |||  || ||||||||||||||||||| ||||    
T  33089640 ttgagcttatctactgacatatgtatttgtgagactatttcagagaacttatgaaaacagcttaggaca 33089572  T

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Target: scaffold0221 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 22362 - 22245
Alignment:
Q  36 agcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 135  Q
    |||||||||| ||||||||||||| |||| || ||   ||||||||||  ||||||||||||||| ||||| ||||| ||||||||||||  ||||||||    
T  22362 agcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaagcttttttcagcttattttcataag 22263  T
Q  136 ttctctaagatagcttat 153  Q
    || || || |||||||||    
T  22262 ttttccaacatagcttat 22245  T

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Target: scaffold0528 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 918 - 1003
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagccttttt 118  Q
    |||||||||||||| |||||||||||| ||| ||| |||| || ||||||| |||| ||||||||||| ||||||||||| |||||    
T  918 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 1003  T

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Target: scaffold0050 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 153
Target Start/End: Complemental strand, 58856 - 58756
Alignment:
Q  53 aagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagctta 152  Q
    ||||||| || |||| |||| ||||| |||||||| ||| |||||||| ||||||||||| ||||||| ||||| ||||||||||||  || ||||||||    
T  58856 aagttttgtgtgactgtttttgaaaatttatgaaagcagtttatgacaattttcataagcttttttcaacttaatttcataagttcttcaacatagctta 58757  T
Q  153 t 153  Q
    |    
T  58756 t 58756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 24755 - 24688
Alignment:
Q  33 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 100  Q
    |||||| |||||| ||||||| ||||| ||||||| |||  || ||||||| ||||||||||||||||    
T  24755 ttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgaca 24688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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