View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0552_low_8 (Length: 651)

Name: NF0552_low_8
Description: NF0552
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0552_low_8
NF0552_low_8
[»] chr8 (25 HSPs)
chr8 (106-625)||(40047591-40048113)
chr8 (46-103)||(40048199-40048256)
chr8 (45-86)||(45276844-45276885)
chr8 (47-86)||(15048560-15048599)
chr8 (48-86)||(1646758-1646796)
chr8 (48-86)||(27669577-27669615)
chr8 (45-86)||(27473319-27473360)
chr8 (45-86)||(33295932-33295973)
chr8 (48-83)||(37569566-37569601)
chr8 (48-86)||(1651823-1651861)
chr8 (48-86)||(1740199-1740237)
chr8 (48-86)||(5152785-5152823)
chr8 (48-82)||(5435151-5435185)
chr8 (52-86)||(7949573-7949607)
chr8 (52-86)||(15871876-15871910)
chr8 (52-86)||(38588748-38588782)
chr8 (52-86)||(45077458-45077492)
chr8 (45-86)||(7535081-7535122)
chr8 (48-86)||(1432292-1432330)
chr8 (52-86)||(1870094-1870128)
chr8 (56-86)||(18298488-18298518)
chr8 (57-86)||(11173894-11173923)
chr8 (53-103)||(44594857-44594911)
chr8 (52-80)||(24659451-24659479)
chr8 (45-77)||(34470714-34470746)
[»] chr3 (33 HSPs)
chr3 (45-103)||(47669399-47669461)
chr3 (18-86)||(28986368-28986431)
chr3 (48-103)||(22201756-22201815)
chr3 (45-86)||(42591945-42591986)
chr3 (45-86)||(51509367-51509408)
chr3 (46-86)||(8474095-8474135)
chr3 (46-86)||(26318431-26318471)
chr3 (46-86)||(54752324-54752364)
chr3 (47-86)||(32633315-32633354)
chr3 (48-86)||(10506199-10506237)
chr3 (48-86)||(16931767-16931805)
chr3 (48-105)||(21568884-21568944)
chr3 (48-86)||(44893901-44893939)
chr3 (48-86)||(54108153-54108191)
chr3 (48-85)||(29818339-29818376)
chr3 (45-82)||(41835174-41835211)
chr3 (45-82)||(46152778-46152815)
chr3 (46-86)||(22152006-22152046)
chr3 (52-87)||(11256263-11256298)
chr3 (52-86)||(4773403-4773437)
chr3 (52-86)||(39241519-39241553)
chr3 (48-86)||(39951518-39951556)
chr3 (45-86)||(1994416-1994457)
chr3 (45-86)||(5900671-5900712)
chr3 (46-83)||(15986399-15986436)
chr3 (45-86)||(21969790-21969831)
chr3 (45-86)||(21992226-21992267)
chr3 (53-86)||(39664440-39664473)
chr3 (48-84)||(12203802-12203838)
chr3 (52-84)||(53716456-53716488)
chr3 (40-86)||(4757736-4757782)
chr3 (48-86)||(18464617-18464655)
chr3 (53-85)||(27801651-27801683)
[»] chr6 (22 HSPs)
chr6 (46-105)||(5310964-5311027)
chr6 (45-86)||(26600518-26600559)
chr6 (48-105)||(7270091-7270152)
chr6 (45-83)||(5639421-5639459)
chr6 (48-86)||(6137629-6137667)
chr6 (48-86)||(7270790-7270828)
chr6 (48-86)||(34890805-34890843)
chr6 (53-103)||(5938069-5938123)
chr6 (45-86)||(31247277-31247318)
chr6 (47-86)||(24744489-24744528)
chr6 (52-86)||(3423425-3423459)
chr6 (52-86)||(32993270-32993304)
chr6 (53-86)||(18053117-18053150)
chr6 (45-86)||(21856803-21856844)
chr6 (45-103)||(25176905-25176967)
chr6 (55-86)||(21540235-21540266)
chr6 (52-86)||(9046247-9046281)
chr6 (52-86)||(26957123-26957157)
chr6 (52-86)||(34994635-34994669)
chr6 (56-86)||(35167751-35167781)
chr6 (45-86)||(31237907-31237948)
chr6 (46-86)||(2517163-2517203)
[»] chr2 (19 HSPs)
chr2 (48-103)||(29472382-29472441)
chr2 (48-86)||(2148137-2148175)
chr2 (48-86)||(13193149-13193187)
chr2 (48-86)||(26181951-26181989)
chr2 (45-86)||(15744618-15744659)
chr2 (45-86)||(19847566-19847607)
chr2 (45-86)||(24372215-24372256)
chr2 (45-86)||(34735591-34735632)
chr2 (48-86)||(15406007-15406045)
chr2 (52-86)||(16305186-16305220)
chr2 (52-86)||(17052219-17052253)
chr2 (52-86)||(24138761-24138795)
chr2 (52-86)||(38332865-38332899)
chr2 (45-86)||(7469327-7469368)
chr2 (45-86)||(12860615-12860656)
chr2 (45-86)||(19815952-19815993)
chr2 (55-86)||(8174143-8174174)
chr2 (45-83)||(7496227-7496265)
chr2 (52-86)||(10992012-10992046)
[»] scaffold0003 (2 HSPs)
scaffold0003 (45-86)||(349234-349275)
scaffold0003 (53-85)||(113528-113560)
[»] chr7 (21 HSPs)
chr7 (47-105)||(19681745-19681807)
chr7 (45-86)||(48626311-48626352)
chr7 (47-86)||(41191935-41191974)
chr7 (48-86)||(28297980-28298018)
chr7 (45-86)||(7579120-7579161)
chr7 (48-85)||(31638194-31638231)
chr7 (47-86)||(17359342-17359381)
chr7 (47-86)||(34037161-34037200)
chr7 (45-105)||(41453253-41453317)
chr7 (52-86)||(6356446-6356480)
chr7 (52-86)||(10526472-10526506)
chr7 (52-86)||(33716749-33716783)
chr7 (52-86)||(36423530-36423564)
chr7 (52-86)||(43247576-43247610)
chr7 (52-86)||(44332774-44332808)
chr7 (53-86)||(6356926-6356959)
chr7 (45-82)||(8542664-8542701)
chr7 (54-86)||(28286374-28286406)
chr7 (18-86)||(1114215-1114287)
chr7 (45-83)||(8937097-8937135)
chr7 (45-83)||(35146946-35146984)
[»] chr1 (30 HSPs)
chr1 (45-86)||(12127301-12127342)
chr1 (48-105)||(37284979-37285040)
chr1 (48-86)||(1762925-1762963)
chr1 (48-86)||(8762650-8762688)
chr1 (48-86)||(16024058-16024096)
chr1 (48-86)||(20306163-20306201)
chr1 (48-86)||(26707447-26707485)
chr1 (48-86)||(35612333-35612371)
chr1 (48-86)||(37304189-37304227)
chr1 (45-86)||(49140391-49140432)
chr1 (52-86)||(2064466-2064500)
chr1 (48-103)||(3089482-3089541)
chr1 (48-86)||(6798058-6798096)
chr1 (52-86)||(9006446-9006480)
chr1 (52-86)||(23476596-23476630)
chr1 (48-86)||(37585944-37585982)
chr1 (52-86)||(38127870-38127904)
chr1 (52-86)||(39486448-39486482)
chr1 (52-86)||(44322821-44322855)
chr1 (52-86)||(45052944-45052978)
chr1 (45-86)||(12481307-12481348)
chr1 (52-85)||(25995946-25995979)
chr1 (53-86)||(27547925-27547958)
chr1 (45-86)||(37576342-37576383)
chr1 (55-86)||(4697140-4697171)
chr1 (56-86)||(27400683-27400713)
chr1 (106-152)||(37466802-37466848)
chr1 (45-82)||(4330085-4330122)
chr1 (53-86)||(31703775-31703808)
chr1 (55-83)||(49643929-49643957)
[»] chr5 (12 HSPs)
chr5 (46-86)||(36440449-36440489)
chr5 (48-86)||(2183104-2183142)
chr5 (52-86)||(9989484-9989518)
chr5 (52-86)||(11316119-11316153)
chr5 (48-86)||(32288328-32288366)
chr5 (45-86)||(35570028-35570069)
chr5 (52-82)||(16860675-16860705)
chr5 (48-86)||(25567239-25567277)
chr5 (47-85)||(37424512-37424550)
chr5 (52-86)||(38958979-38959013)
chr5 (53-82)||(16860559-16860588)
chr5 (53-86)||(34264604-34264637)
[»] chr4 (35 HSPs)
chr4 (46-86)||(37206676-37206716)
chr4 (48-86)||(23755669-23755707)
chr4 (48-86)||(30683779-30683817)
chr4 (48-86)||(38339653-38339691)
chr4 (48-103)||(44957529-44957588)
chr4 (48-85)||(23756051-23756088)
chr4 (45-86)||(42855587-42855628)
chr4 (45-86)||(46849917-46849958)
chr4 (48-85)||(52557338-52557375)
chr4 (51-86)||(24898350-24898385)
chr4 (47-86)||(41878109-41878148)
chr4 (52-86)||(1433526-1433560)
chr4 (52-86)||(6712124-6712158)
chr4 (52-86)||(14985492-14985526)
chr4 (48-86)||(15477896-15477934)
chr4 (48-86)||(19508664-19508702)
chr4 (52-86)||(33091708-33091742)
chr4 (48-86)||(36122684-36122722)
chr4 (52-86)||(43734541-43734575)
chr4 (52-86)||(44991533-44991567)
chr4 (48-86)||(50508708-50508746)
chr4 (52-103)||(50768961-50769016)
chr4 (52-86)||(53259393-53259427)
chr4 (45-86)||(8592130-8592171)
chr4 (45-86)||(16038042-16038083)
chr4 (45-86)||(19088589-19088630)
chr4 (45-86)||(53995182-53995223)
chr4 (45-85)||(623927-623967)
chr4 (55-86)||(21763439-21763470)
chr4 (48-86)||(12817967-12818005)
chr4 (52-86)||(39448743-39448777)
chr4 (52-86)||(43566633-43566667)
chr4 (52-86)||(53751157-53751191)
chr4 (45-86)||(25182060-25182101)
chr4 (111-152)||(31214162-31214203)
[»] scaffold0182 (1 HSPs)
scaffold0182 (45-86)||(19869-19910)
[»] scaffold0340 (1 HSPs)
scaffold0340 (48-86)||(18434-18472)
[»] scaffold0221 (1 HSPs)
scaffold0221 (52-86)||(8589-8623)
[»] scaffold0134 (1 HSPs)
scaffold0134 (48-86)||(14386-14424)
[»] scaffold0115 (1 HSPs)
scaffold0115 (52-86)||(21672-21706)
[»] scaffold0019 (1 HSPs)
scaffold0019 (52-86)||(50731-50765)
[»] scaffold0220 (1 HSPs)
scaffold0220 (45-86)||(20912-20953)
[»] scaffold0037 (1 HSPs)
scaffold0037 (45-86)||(45917-45958)
[»] scaffold0029 (1 HSPs)
scaffold0029 (45-86)||(72923-72964)
[»] scaffold0032 (1 HSPs)
scaffold0032 (47-86)||(82108-82147)
[»] scaffold0072 (1 HSPs)
scaffold0072 (56-86)||(15609-15639)


Alignment Details
Target: chr8 (Bit Score: 423; Significance: 0; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 106 - 625
Target Start/End: Complemental strand, 40048113 - 40047591
Alignment:
Q  106 atccaataccaattaaatggttagattataaaaaatgtaatttagcccannnnnnncactgtttgcaatgcaagtaaaagcacataaaattagtctaaga 205  Q
    |||||||| ||||||||| |||||||||| ||||| ||||||||||| |       |  |||||||||||||||||||||||||||||||||||||||||    
T  40048113 atccaatatcaattaaatagttagattatcaaaaaagtaatttagcc-atttttttctatgtttgcaatgcaagtaaaagcacataaaattagtctaaga 40048015  T
Q  206 aaatgaaaagttgaaaaacgacaacgtggcaagatataattgggaacagtcacgtggagcataacaccattggttaaaacagctcgcaggaagtgtgacc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40048014 aaatgaaaagttgaaaaacgacaacgtggcaagatataattgggaacagtcacgtggagcataacaccattggttaaaacagctcgcaggaagtgtgacc 40047915  T
Q  306 ttgagatctaaataaaaaccgcaactgctcaaagagtctcttgttcgaatgaaacaaacaccactgacatttaaataagcatcttagaaattctctatca 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40047914 ttgagatctaaataaaaaccgcaactgctcaaagagtctcttgttcgaatgaaacaaacaccactgacatttaaataagcatcttagaaattctctatca 40047815  T
Q  406 tttcatcattagggttcatcgagagtgcaatatgggagagcgaaagcgaattcctctcggaatttttgcagtgatcttcttcgtaatttgttcttcatcg 505  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40047814 tttcatcattagggttcatcgagagtgcaacatgggagagcgaaagcgaattcctctcggaatttttgcagtgatcttcttcgtaatttgttcttcatcg 40047715  T
Q  506 ttacaccttcttcgtgcttccgatgatgccgatgacgcggtaattcatcttgtc----nnnnnnnnnggtgtttgtttgatgattgaatttggatctatg 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||    
T  40047714 ttacaccttcttcgtgcttccgatgatgccgatgacgcggtaattcatcttgtccttttttttttttggtgtttgtttgatgattgaatttggatctatg 40047615  T
Q  602 ttgtttttatgaggctttaattga 625  Q
    ||||||||||||||||||||||||    
T  40047614 ttgtttttatgaggctttaattga 40047591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 40048256 - 40048199
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagaggacataacacaaaccttaac 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40048256 gaatatgaccaaaatgatactaataaataaagttagaggacataacacaaactttaac 40048199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 45276844 - 45276885
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45276844 ggaatatgaccaaaatgatactaataaataaagttagaggac 45276885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 15048599 - 15048560
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15048599 aatatgaccaaaatgatactaataaataaagttagaggac 15048560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 1646758 - 1646796
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1646758 atatgaccaaaatgatactaataaataaagttagaggac 1646796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 27669615 - 27669577
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27669615 atatgaccaaaatgatactaataaataaagttagaggac 27669577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 27473319 - 27473360
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  27473319 ggaataagaccaaaatgatactaataaataaagttagaggac 27473360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 33295932 - 33295973
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  33295932 ggaatatgatcaaaatgatactaataaataaagttagaggac 33295973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 37569566 - 37569601
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagag 83  Q
    ||||||||||||||||||||||||||||||||||||    
T  37569566 atatgaccaaaatgatactaataaataaagttagag 37569601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 1651823 - 1651861
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1651823 atatgaccaaaatgatactaacaaataaagttagaggac 1651861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 1740199 - 1740237
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1740199 atatgaccaaaatgatactaacaaataaagttagaggac 1740237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 5152785 - 5152823
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  5152785 atatgaccaaaatgatactagtaaataaagttagaggac 5152823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 5435151 - 5435185
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttaga 82  Q
    |||||||||||||||||||||||||||||||||||    
T  5435151 atatgaccaaaatgatactaataaataaagttaga 5435185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 7949607 - 7949573
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  7949607 gaccaaaatgatactaataaataaagttagaggac 7949573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 15871876 - 15871910
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  15871876 gaccaaaatgatactaataaataaagttagaggac 15871910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 38588782 - 38588748
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  38588782 gaccaaaatgatactaataaataaagttagaggac 38588748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 45077458 - 45077492
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  45077458 gaccaaaatgatactaataaataaagttagaggac 45077492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 7535081 - 7535122
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  7535081 ggaataagaccaaaatgatactaataaataaagctagaggac 7535122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 1432330 - 1432292
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  1432330 atatgatcaaaatgatattaataaataaagttagaggac 1432292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 1870128 - 1870094
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||| ||||    
T  1870128 gaccaaaatgatactaataaataaagttaggggac 1870094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 18298488 - 18298518
Alignment:
Q  56 aaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||    
T  18298488 aaaatgatactaataaataaagttagaggac 18298518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 86
Target Start/End: Original strand, 11173894 - 11173923
Alignment:
Q  57 aaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||    
T  11173894 aaatgatactaataaataaagttagaggac 11173923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 44594857 - 44594911
Alignment:
Q  53 accaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    |||||||| |||||||||||||||||||||||    |||||||||||||| ||||    
T  44594857 accaaaataatactaataaataaagttagaggatccacataacacaaaccctaac 44594911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 80
Target Start/End: Original strand, 24659451 - 24659479
Alignment:
Q  52 gaccaaaatgatactaataaataaagtta 80  Q
    |||||||||||||||||||||||||||||    
T  24659451 gaccaaaatgatactaataaataaagtta 24659479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 34470746 - 34470714
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaag 77  Q
    ||||||||| |||||||||||||||||||||||    
T  34470746 ggaatatgatcaaaatgatactaataaataaag 34470714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 7e-17; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 47669461 - 47669399
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||    
T  47669461 ggaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccttaac 47669399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 28986368 - 28986431
Alignment:
Q  18 caataatatcagttactatttaatcatggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||| |||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  28986368 caataatatcagtcactatttaatcat-----atgaccaaaatgatactaataaataaagttagaggac 28986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 22201815 - 22201756
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||    
T  22201815 atatgaccaaaatgatactaataaataaagttagaggactcacataacacaaaccttaac 22201756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 42591986 - 42591945
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42591986 ggaatatgaccaaaatgatactaataaataaagttagaggac 42591945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 51509367 - 51509408
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  51509367 ggaatatgaccaaaatgatactaataaataaagttagaggac 51509408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 8474095 - 8474135
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8474095 gaatatgaccaaaatgatactaataaataaagttagaggac 8474135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 26318431 - 26318471
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26318431 gaatatgaccaaaatgatactaataaataaagttagaggac 26318471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 54752364 - 54752324
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  54752364 gaatatgaccaaaatgatactaataaataaagttagaggac 54752324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 32633315 - 32633354
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32633315 aatatgaccaaaatgatactaataaataaagttagaggac 32633354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 10506199 - 10506237
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10506199 atatgaccaaaatgatactaataaataaagttagaggac 10506237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 16931805 - 16931767
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16931805 atatgaccaaaatgatactaataaataaagttagaggac 16931767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 21568944 - 21568884
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagg---acataacacaaaccttaacat 105  Q
    |||||||||||||||||||||||||||| ||||||||   |||||||||||||| ||||||    
T  21568944 atatgaccaaaatgatactaataaataaggttagaggaccacataacacaaaccctaacat 21568884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 44893939 - 44893901
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44893939 atatgaccaaaatgatactaataaataaagttagaggac 44893901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 54108153 - 54108191
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  54108153 atatgaccaaaatgatactaataaataaagttagaggac 54108191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 29818376 - 29818339
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagga 85  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29818376 atatgaccaaaatgatactaataaataaagttagagga 29818339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 41835174 - 41835211
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttaga 82  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41835174 ggaatatgaccaaaatgatactaataaataaagttaga 41835211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 46152815 - 46152778
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttaga 82  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46152815 ggaatatgaccaaaatgatactaataaataaagttaga 46152778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 22152046 - 22152006
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  22152046 gaataggaccaaaatgatactaataaataaagttagaggac 22152006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 11256298 - 11256263
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggaca 87  Q
    ||||||||||||||||||||||||||||||||||||    
T  11256298 gaccaaaatgatactaataaataaagttagaggaca 11256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 4773437 - 4773403
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  4773437 gaccaaaatgatactaataaataaagttagaggac 4773403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 39241553 - 39241519
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  39241553 gaccaaaatgatactaataaataaagttagaggac 39241519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 39951556 - 39951518
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  39951556 atatgaccaaaatgatactaataaataaagttaaaggac 39951518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 1994416 - 1994457
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  1994416 ggaataggaccaaaatgatgctaataaataaagttagaggac 1994457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 5900671 - 5900712
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  5900671 ggaataggaccaaaatgatgctaataaataaagttagaggac 5900712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 15986436 - 15986399
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagag 83  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  15986436 gaataggaccaaaatgatactaataaataaagttagag 15986399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 21969831 - 21969790
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  21969831 ggaataagaccaaaacgatactaataaataaagttagaggac 21969790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 21992267 - 21992226
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  21992267 ggaataagaccaaaacgatactaataaataaagttagaggac 21992226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 39664440 - 39664473
Alignment:
Q  53 accaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||    
T  39664440 accaaaatgatactaataaataaagttagaggac 39664473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 12203802 - 12203838
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagg 84  Q
    |||| ||||||||||||||||||||||||||||||||    
T  12203802 atattaccaaaatgatactaataaataaagttagagg 12203838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 53716488 - 53716456
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagagg 84  Q
    |||||||||||||||||||||||||||||||||    
T  53716488 gaccaaaatgatactaataaataaagttagagg 53716456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 4757736 - 4757782
Alignment:
Q  40 atcatggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||| ||||||  ||||||||||| ||||||||||||||||||||||    
T  4757736 atcaaggaatagaaccaaaatgatgctaataaataaagttagaggac 4757782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 18464655 - 18464617
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||| || |||||    
T  18464655 atatgaccaaaatgatactaataaataaagctataggac 18464617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 27801683 - 27801651
Alignment:
Q  53 accaaaatgatactaataaataaagttagagga 85  Q
    |||||||||||| ||||||||||||||||||||    
T  27801683 accaaaatgatattaataaataaagttagagga 27801651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 46 - 105
Target Start/End: Complemental strand, 5311027 - 5310964
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaacat 105  Q
    |||||||||||||||||||||||||||||||||||||||    |||||||||||||| ||||||    
T  5311027 gaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacat 5310964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 26600559 - 26600518
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26600559 ggaatatgaccaaaatgatactaataaataaagttagaggac 26600518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 7270152 - 7270091
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaacat 105  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||| ||||||    
T  7270152 atatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacat 7270091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 5639421 - 5639459
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagag 83  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5639421 ggaatatgaccaaaatgatactaataaataaagttagag 5639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 6137629 - 6137667
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6137629 atatgaccaaaatgatactaataaataaagttagaggac 6137667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 7270828 - 7270790
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7270828 atatgaccaaaatgatactaataaataaagttagaggac 7270790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 34890843 - 34890805
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34890843 atatgaccaaaatgatactaataaataaagttagaggac 34890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 5938069 - 5938123
Alignment:
Q  53 accaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    ||||||||||||||||||||||||||||||||    |||||||||||||||||||    
T  5938069 accaaaatgatactaataaataaagttagaggacccacataacacaaaccttaac 5938123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 31247318 - 31247277
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  31247318 ggaatatgatcaaaatgatactaataaataaagttagaggac 31247277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 24744528 - 24744489
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  24744528 aataggaccaaaatgatactaataaataaagttagaggac 24744489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 3423425 - 3423459
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  3423425 gaccaaaatgatactaataaataaagttagaggac 3423459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 32993270 - 32993304
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  32993270 gaccaaaatgatactaataaataaagttagaggac 32993304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 18053150 - 18053117
Alignment:
Q  53 accaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||    
T  18053150 accaaaatgatactaataaataaagttagaggac 18053117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 21856803 - 21856844
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  21856803 ggaataagaccaaaatgatgctaataaataaagttagaggac 21856844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 25176905 - 25176967
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    |||||| |||||||||||| ||||||||||||||||||||    |||||||||||||| ||||    
T  25176905 ggaataggaccaaaatgatgctaataaataaagttagaggccccacataacacaaaccctaac 25176967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 86
Target Start/End: Original strand, 21540235 - 21540266
Alignment:
Q  55 caaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||    
T  21540235 caaaatgatactaataaataaagttagaggac 21540266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 9046281 - 9046247
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||| |||||||||    
T  9046281 gaccaaaatgatactaataaataaatttagaggac 9046247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 26957157 - 26957123
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||| ||||||||    
T  26957157 gaccaaaatgatactaataaataaagctagaggac 26957123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 34994635 - 34994669
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||| ||||||||||||    
T  34994635 gaccaaaatgatactaataaatcaagttagaggac 34994669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 35167751 - 35167781
Alignment:
Q  56 aaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||    
T  35167751 aaaatgatactaataaataaagttagaggac 35167781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 31237948 - 31237907
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||| |||| |||||| |||||||||||||||||||||||||    
T  31237948 ggaacatgatcaaaataatactaataaataaagttagaggac 31237907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 2517203 - 2517163
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||| || |||||||||||| ||||||    
T  2517203 gaatatgaccaaaatgattcttataaataaagttggaggac 2517163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 29472441 - 29472382
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||    
T  29472441 atatgaccaaaatgatactaataaataaagttagaggactcacataacacaaaccttaac 29472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 2148137 - 2148175
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2148137 atatgaccaaaatgatactaataaataaagttagaggac 2148175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 13193187 - 13193149
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13193187 atatgaccaaaatgatactaataaataaagttagaggac 13193149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 26181951 - 26181989
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26181951 atatgaccaaaatgatactaataaataaagttagaggac 26181989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 15744659 - 15744618
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  15744659 ggaatatgaccaaaatgatgctaataaataaagttagaggac 15744618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 19847566 - 19847607
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  19847566 ggaatatgaccaaaatgatgctaataaataaagttagaggac 19847607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 24372215 - 24372256
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  24372215 ggaataggaccaaaatgatactaataaataaagttagaggac 24372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 34735591 - 34735632
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  34735591 ggaataggaccaaaatgatactaataaataaagttagaggac 34735632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 15406007 - 15406045
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  15406007 atatgaccaaaataatactaataaataaagttagaggac 15406045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 16305220 - 16305186
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  16305220 gaccaaaatgatactaataaataaagttagaggac 16305186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 17052253 - 17052219
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  17052253 gaccaaaatgatactaataaataaagttagaggac 17052219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 24138761 - 24138795
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  24138761 gaccaaaatgatactaataaataaagttagaggac 24138795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 38332899 - 38332865
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  38332899 gaccaaaatgatactaataaataaagttagaggac 38332865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 7469368 - 7469327
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  7469368 ggaataggaccaaaatgatactagtaaataaagttagaggac 7469327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 12860615 - 12860656
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  12860615 ggaataggaccaaaatgatgctaataaataaagttagaggac 12860656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 19815952 - 19815993
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||| |||||||||||||||||||||||| |||||||    
T  19815952 ggaatatgagcaaaatgatactaataaataaagtcagaggac 19815993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 86
Target Start/End: Original strand, 8174143 - 8174174
Alignment:
Q  55 caaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||    
T  8174143 caaaatgatactaataaataaagttagaggac 8174174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 7496227 - 7496265
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagag 83  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  7496227 ggaataggaccaaaatgatgctaataaataaagttagag 7496265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 10992046 - 10992012
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||| ||||||||||||||||||||||    
T  10992046 gaccaaaatgatgctaataaataaagttagaggac 10992012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 349275 - 349234
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  349275 ggaatatgaccaaaatgatactaataaataaagttagaggac 349234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 113560 - 113528
Alignment:
Q  53 accaaaatgatactaataaataaagttagagga 85  Q
    |||||||||||||||||||||||||||||||||    
T  113560 accaaaatgatactaataaataaagttagagga 113528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 19681745 - 19681807
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaacat 105  Q
    ||||||||||||||||||||||||||||||||||||||    |||||||||||||| ||||||    
T  19681745 aatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacat 19681807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 48626311 - 48626352
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  48626311 ggaatatgaccaaaatgatactaataaataaagttagaggac 48626352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 41191935 - 41191974
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41191935 aatatgaccaaaatgatactaataaataaagttagaggac 41191974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 28298018 - 28297980
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28298018 atatgaccaaaatgatactaataaataaagttagaggac 28297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 7579120 - 7579161
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  7579120 ggaataagaccaaaatgatactaataaataaagttagaggac 7579161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 31638194 - 31638231
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagga 85  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31638194 atatgaccaaaatgatactaataaataaagttagagga 31638231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 17359381 - 17359342
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  17359381 aataggaccaaaatgatactaataaataaagttagaggac 17359342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 34037161 - 34037200
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  34037161 aatatgaccaaaatgatattaataaataaagttagaggac 34037200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 41453253 - 41453317
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaacat 105  Q
    |||||| |||||||||||| ||||||||||||||||||||    |||||||||||||| ||||||    
T  41453253 ggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaaccctaacat 41453317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 6356480 - 6356446
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  6356480 gaccaaaatgatactaataaataaagttagaggac 6356446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 10526506 - 10526472
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  10526506 gaccaaaatgatactaataaataaagttagaggac 10526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 33716783 - 33716749
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  33716783 gaccaaaatgatactaataaataaagttagaggac 33716749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 36423564 - 36423530
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  36423564 gaccaaaatgatactaataaataaagttagaggac 36423530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 43247610 - 43247576
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  43247610 gaccaaaatgatactaataaataaagttagaggac 43247576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 44332774 - 44332808
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  44332774 gaccaaaatgatactaataaataaagttagaggac 44332808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 6356959 - 6356926
Alignment:
Q  53 accaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||    
T  6356959 accaaaatgatactaataaataaagttagaggac 6356926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 8542701 - 8542664
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttaga 82  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8542701 ggaatatgaccaaaatgatgctaataaataaagttaga 8542664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 28286374 - 28286406
Alignment:
Q  54 ccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||    
T  28286374 ccaaaatgatactaataaataaagttagaggac 28286406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 1114287 - 1114215
Alignment:
Q  18 caataatatcagttactatttaatcat----ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||| | || |||||||||||||    |||||| ||||| |||||| ||||||||||||||||||||||    
T  1114287 caataatacccgtcactatttaatcataataggaataggaccacaatgatgctaataaataaagttagaggac 1114215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 8937097 - 8937135
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagag 83  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  8937097 ggaatatgaccaacatgatattaataaataaagttagag 8937135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 35146946 - 35146984
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagag 83  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  35146946 ggaatatgaccaaaatgatattgataaataaagttagag 35146984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 12127301 - 12127342
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12127301 ggaatatgaccaaaatgatactaataaataaagttagaggac 12127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 37284979 - 37285040
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaacat 105  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||| ||||||    
T  37284979 atatgaccaaaatgatactaataaataaagttagaggacccacataacacaaaccctaacat 37285040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 1762925 - 1762963
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1762925 atatgaccaaaatgatactaataaataaagttagaggac 1762963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 8762650 - 8762688
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8762650 atatgaccaaaatgatactaataaataaagttagaggac 8762688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 16024096 - 16024058
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16024096 atatgaccaaaatgatactaataaataaagttagaggac 16024058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 20306201 - 20306163
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20306201 atatgaccaaaatgatactaataaataaagttagaggac 20306163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 26707447 - 26707485
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26707447 atatgaccaaaatgatactaataaataaagttagaggac 26707485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 35612333 - 35612371
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35612333 atatgaccaaaatgatactaataaataaagttagaggac 35612371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 37304227 - 37304189
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37304227 atatgaccaaaatgatactaataaataaagttagaggac 37304189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 49140391 - 49140432
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  49140391 ggaatataaccaaaatgatactaataaataaagttagaggac 49140432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 2064466 - 2064500
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  2064466 gaccaaaatgatactaataaataaagttagaggac 2064500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 3089541 - 3089482
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    ||||||||||||||||||||||||||||||||| |||    |||||||||||||| ||||    
T  3089541 atatgaccaaaatgatactaataaataaagttataggatccacataacacaaaccctaac 3089482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 6798058 - 6798096
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  6798058 atatgaccaaaatgatactaataaataaaattagaggac 6798096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 9006446 - 9006480
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  9006446 gaccaaaatgatactaataaataaagttagaggac 9006480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 23476596 - 23476630
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  23476596 gaccaaaatgatactaataaataaagttagaggac 23476630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 37585944 - 37585982
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  37585944 atatgaccaaaataatactaataaataaagttagaggac 37585982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 38127904 - 38127870
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  38127904 gaccaaaatgatactaataaataaagttagaggac 38127870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 39486448 - 39486482
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  39486448 gaccaaaatgatactaataaataaagttagaggac 39486482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 44322855 - 44322821
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  44322855 gaccaaaatgatactaataaataaagttagaggac 44322821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 45052944 - 45052978
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  45052944 gaccaaaatgatactaataaataaagttagaggac 45052978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 12481307 - 12481348
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  12481307 ggaataggaccaaaatgatgctaataaataaagttagaggac 12481348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 52 - 85
Target Start/End: Complemental strand, 25995979 - 25995946
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagagga 85  Q
    ||||||||||||||||||||||||||||||||||    
T  25995979 gaccaaaatgatactaataaataaagttagagga 25995946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 27547925 - 27547958
Alignment:
Q  53 accaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||    
T  27547925 accaaaatgatactaataaataaagttagaggac 27547958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 37576383 - 37576342
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  37576383 ggaataggaccaaaatgatacttataaataaagttagaggac 37576342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 86
Target Start/End: Original strand, 4697140 - 4697171
Alignment:
Q  55 caaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||    
T  4697140 caaaatgatactaataaataaagttagaggac 4697171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 56 - 86
Target Start/End: Original strand, 27400683 - 27400713
Alignment:
Q  56 aaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||    
T  27400683 aaaatgatactaataaataaagttagaggac 27400713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 37466848 - 37466802
Alignment:
Q  106 atccaataccaattaaatggttagattataaaaaatgtaatttagcc 152  Q
    |||| |||||||||||||| |||||  ||||||||||||||||||||    
T  37466848 atccgataccaattaaatgattagagaataaaaaatgtaatttagcc 37466802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 4330085 - 4330122
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttaga 82  Q
    |||||||||  |||||||||||||||||||||||||||    
T  4330085 ggaatatgattaaaatgatactaataaataaagttaga 4330122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 31703808 - 31703775
Alignment:
Q  53 accaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||| ||||||||||||||||||||||    
T  31703808 accaaaatgatgctaataaataaagttagaggac 31703775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 55 - 83
Target Start/End: Original strand, 49643929 - 49643957
Alignment:
Q  55 caaaatgatactaataaataaagttagag 83  Q
    |||||||||||||||||||||||||||||    
T  49643929 caaaatgatactaataaataaagttagag 49643957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 36440449 - 36440489
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36440449 gaatatgaccaaaatgatactaataaataaagttagaggac 36440489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 2183142 - 2183104
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2183142 atatgaccaaaatgatactaataaataaagttagaggac 2183104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 9989518 - 9989484
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  9989518 gaccaaaatgatactaataaataaagttagaggac 9989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 11316153 - 11316119
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  11316153 gaccaaaatgatactaataaataaagttagaggac 11316119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 32288328 - 32288366
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  32288328 atatgaccaaaataatactaataaataaagttagaggac 32288366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 35570028 - 35570069
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  35570028 ggaataagaccgaaatgatactaataaataaagttagaggac 35570069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 82
Target Start/End: Original strand, 16860675 - 16860705
Alignment:
Q  52 gaccaaaatgatactaataaataaagttaga 82  Q
    |||||||||||||||||||||||||||||||    
T  16860675 gaccaaaatgatactaataaataaagttaga 16860705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 25567239 - 25567277
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  25567239 atatgactaaaataatactaataaataaagttagaggac 25567277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 37424512 - 37424550
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagagga 85  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  37424512 aataggaccaaaatgatattaataaataaagttagagga 37424550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 38958979 - 38959013
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||| |||||||||||||||||||    
T  38958979 gaccaaaatgatacttataaataaagttagaggac 38959013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 82
Target Start/End: Original strand, 16860559 - 16860588
Alignment:
Q  53 accaaaatgatactaataaataaagttaga 82  Q
    ||||||||||||||||||||||||||||||    
T  16860559 accaaaatgatactaataaataaagttaga 16860588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 34264604 - 34264637
Alignment:
Q  53 accaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||| |||||||||||||||||||||    
T  34264604 accaaaatgatattaataaataaagttagaggac 34264637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 37206676 - 37206716
Alignment:
Q  46 gaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37206676 gaatatgaccaaaatgatactaataaataaagttagaggac 37206716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 23755669 - 23755707
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23755669 atatgaccaaaatgatactaataaataaagttagaggac 23755707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 30683779 - 30683817
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30683779 atatgaccaaaatgatactaataaataaagttagaggac 30683817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 38339691 - 38339653
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38339691 atatgaccaaaatgatactaataaataaagttagaggac 38339653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 44957588 - 44957529
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||| ||||    
T  44957588 atatgaccaaaatgatactaataaataaagttagaggatccacataacacaaaccctaac 44957529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 23756051 - 23756088
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagga 85  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23756051 atatgaccaaaatgatactaataaataaagttagagga 23756088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 42855587 - 42855628
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  42855587 ggaataggaccaaaatgatactaataaataaagttagaggac 42855628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 46849917 - 46849958
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  46849917 ggaataagaccaaaatgatactaataaataaagttagaggac 46849958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 52557338 - 52557375
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagagga 85  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52557338 atatgaccaaaatgatactaataaataaagttagagga 52557375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 24898385 - 24898350
Alignment:
Q  51 tgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||||||    
T  24898385 tgaccaaaatgatactaataaataaagttagaggac 24898350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 41878109 - 41878148
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  41878109 aatatgaccaaaatgatactaataaataaagttggaggac 41878148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 1433526 - 1433560
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  1433526 gaccaaaatgatactaataaataaagttagaggac 1433560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 6712158 - 6712124
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  6712158 gaccaaaatgatactaataaataaagttagaggac 6712124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 14985526 - 14985492
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  14985526 gaccaaaatgatactaataaataaagttagaggac 14985492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 15477896 - 15477934
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  15477896 atatgaccaaaatgatactaataaacaaagttagaggac 15477934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 19508664 - 19508702
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  19508664 atatgaccaaaatcatactaataaataaagttagaggac 19508702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 33091708 - 33091742
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  33091708 gaccaaaatgatactaataaataaagttagaggac 33091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 36122684 - 36122722
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  36122684 atatgaccaaaatgatactaataaatatagttagaggac 36122722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 43734541 - 43734575
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  43734541 gaccaaaatgatactaataaataaagttagaggac 43734575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 44991533 - 44991567
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  44991533 gaccaaaatgatactaataaataaagttagaggac 44991567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 50508708 - 50508746
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  50508708 atatgaccaaaataatactaataaataaagttagaggac 50508746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 50769016 - 50768961
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagagg----acataacacaaaccttaac 103  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||| ||||    
T  50769016 gaccaaaatgatactaataaataaagttagaggatccacataacacaaaccctaac 50768961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 53259393 - 53259427
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  53259393 gaccaaaatgatactaataaataaagttagaggac 53259427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 8592171 - 8592130
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  8592171 ggaataggaccaaaatgatgctaataaataaagttagaggac 8592130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 16038042 - 16038083
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  16038042 ggaataggaccaaaatgatgctaataaataaagttagaggac 16038083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 19088589 - 19088630
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  19088589 ggaataagatcaaaatgatactaataaataaagttagaggac 19088630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 53995182 - 53995223
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  53995182 ggaataggaccaaaatgatattaataaataaagttagaggac 53995223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 623927 - 623967
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagagga 85  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  623927 ggaataagaccaaaatgatgctaataaataaagttagagga 623967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 86
Target Start/End: Original strand, 21763439 - 21763470
Alignment:
Q  55 caaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||||||    
T  21763439 caaaatgatactaataaataaagttagaggac 21763470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 12818005 - 12817967
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  12818005 atatgaccaaaatgatactgataaataaagttacaggac 12817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 39448743 - 39448777
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||| ||||||||||||||||||||||    
T  39448743 gaccaaaatgatgctaataaataaagttagaggac 39448777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 43566633 - 43566667
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||| ||||||    
T  43566633 gaccaaaatgatactaataaataaagtttgaggac 43566667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 53751157 - 53751191
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||| |||||||||||||||||||||||||    
T  53751157 gaccaaaattatactaataaataaagttagaggac 53751191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 25182060 - 25182101
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| ||||||||||||  |||||||||||||||||||||    
T  25182060 ggaataggaccaaaatgatgttaataaataaagttagaggac 25182101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 31214203 - 31214162
Alignment:
Q  111 ataccaattaaatggttagattataaaaaatgtaatttagcc 152  Q
    ||||||||||||| ||||||| || |||||||||||||||||    
T  31214203 ataccaattaaatagttagatgatcaaaaatgtaatttagcc 31214162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 19910 - 19869
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  19910 ggaatatgaccaaaatgatgctaataaataaagttagaggac 19869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 18472 - 18434
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  18472 atatgaccaaaatgatactaataaataaaattagaggac 18434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 8623 - 8589
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  8623 gaccaaaatgatactaataaataaagttagaggac 8589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 14386 - 14424
Alignment:
Q  48 atatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  14386 atatgaccaaaatgatgctaataaataaagttagaggac 14424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 21706 - 21672
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  21706 gaccaaaatgatactaataaataaagttagaggac 21672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 50731 - 50765
Alignment:
Q  52 gaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||||||    
T  50731 gaccaaaatgatactaataaataaagttagaggac 50765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 20953 - 20912
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  20953 ggaataggaccaaaatgatgctaataaataaagttagaggac 20912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 45958 - 45917
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  45958 ggaatatgaccaaaatgaaactaataagtaaagttagaggac 45917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 72964 - 72923
Alignment:
Q  45 ggaatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  72964 ggaataagaccaaaatgatgctaataaataaagttagaggac 72923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 82108 - 82147
Alignment:
Q  47 aatatgaccaaaatgatactaataaataaagttagaggac 86  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  82108 aataggaccaaaatgatattaataaataaagttagaggac 82147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 56 - 86
Target Start/End: Complemental strand, 15639 - 15609
Alignment:
Q  56 aaaatgatactaataaataaagttagaggac 86  Q
    |||||||||||||||||||||||||||||||    
T  15639 aaaatgatactaataaataaagttagaggac 15609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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