View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0553_high_28 (Length: 209)
Name: NF0553_high_28
Description: NF0553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0553_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 36141431 - 36141296
Alignment:
| Q |
1 |
tcaaacatattgttccttagactgcaagaagaatgagcataccgccgtaagtattatgactaattaagcatgattt---actaataaccatagaagatcc |
97 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36141431 |
tcaaacatattgttccttagactgcaagaagaatgagcataccgccgtaagtattatgactaattaagcatgatttactactaataaccatagaagatcc |
36141332 |
T |
|
| Q |
98 |
tttctaaatctaaagttacaagcctaccctatgata |
133 |
Q |
| |
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|||||||||||||||||||||||||||| ||||||| |
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| T |
36141331 |
tttctaaatctaaagttacaagcctaccttatgata |
36141296 |
T |
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