View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0553_low_35 (Length: 282)
Name: NF0553_low_35
Description: NF0553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0553_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 612954 - 613144
Alignment:
| Q |
58 |
taggttattgaagcttcattagttttctgacaagttaataagagattagttattgttgtgccttattttggaagtttgtaatacatctgtcaaatcacgc |
157 |
Q |
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| T |
612954 |
taggttattgaagcttcattagttttctgacaagttaataagagattagttattgttgtgccttattttggaagtttgtaatacatctgtcaaatcacgc |
613053 |
T |
|
| Q |
158 |
ggaagctatcaacatagagagtaatgaggaaaatttcacataatctttgga-tttgaattcatacaatgctgctactgctagtctctgctc |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
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| T |
613054 |
ggaagctatcaacatagagagtaatgaggaaaatttcacataatctttggattttgaattcatacaatgctgctactgctagtctttgctc |
613144 |
T |
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