View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0553_low_47 (Length: 251)

Name: NF0553_low_47
Description: NF0553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0553_low_47
NF0553_low_47
[»] chr3 (1 HSPs)
chr3 (29-251)||(1281165-1281387)
[»] chr6 (30 HSPs)
chr6 (29-251)||(4617073-4617295)
chr6 (29-251)||(4601840-4602062)
chr6 (29-247)||(4516372-4516590)
chr6 (62-247)||(4256474-4256660)
chr6 (45-247)||(4260017-4260219)
chr6 (29-251)||(4585687-4585909)
chr6 (29-247)||(4626002-4626220)
chr6 (29-247)||(4592282-4592500)
chr6 (29-247)||(4560557-4560775)
chr6 (29-251)||(4613577-4613799)
chr6 (65-246)||(4622229-4622410)
chr6 (62-249)||(3171825-3172012)
chr6 (29-251)||(4480744-4480966)
chr6 (114-247)||(4563847-4563980)
chr6 (87-247)||(4574417-4574577)
chr6 (29-247)||(4571023-4571241)
chr6 (114-251)||(4267025-4267162)
chr6 (114-251)||(4457730-4457867)
chr6 (114-251)||(4469939-4470076)
chr6 (114-251)||(4514980-4515117)
chr6 (93-247)||(4557240-4557394)
chr6 (117-247)||(4568195-4568325)
chr6 (114-251)||(4461259-4461396)
chr6 (62-251)||(4490214-4490403)
chr6 (87-251)||(4598280-4598444)
chr6 (39-247)||(4579493-4579701)
chr6 (114-185)||(4299671-4299742)
chr6 (144-251)||(4506023-4506130)
chr6 (160-251)||(4493137-4493228)
chr6 (29-251)||(4504256-4504478)
[»] chr8 (3 HSPs)
chr8 (29-251)||(1674277-1674499)
chr8 (87-247)||(16686130-16686290)
chr8 (114-251)||(20863702-20863839)
[»] chr5 (2 HSPs)
chr5 (29-251)||(27999958-28000180)
chr5 (114-251)||(24103135-24103272)
[»] scaffold0288 (1 HSPs)
scaffold0288 (32-247)||(3582-3797)
[»] chr7 (1 HSPs)
chr7 (87-251)||(3086529-3086693)
[»] scaffold0477 (1 HSPs)
scaffold0477 (45-251)||(4545-4751)
[»] scaffold0475 (1 HSPs)
scaffold0475 (136-213)||(3581-3658)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 1281165 - 1281387
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1281165 acaaccacccggtctagtgttctcctccgccgccttcttcaattccatggccttttctctcatattctttccttcatccccggctatcaattcattgatc 1281264  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    | |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1281265 aacttagccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 1281364  T
Q  229 gtggccaacacaacattggcact 251  Q
     ||||||||||||||||||||||    
T  1281365 atggccaacacaacattggcact 1281387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 4617073 - 4617295
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    ||||||||||||||||||||||||||| |||  ||||||||| ||||||||| |||   |||| |||||||||| ||||||| |||||| ||||||||||    
T  4617073 acaaccacctggtctagtgttctcctctgccttcttcttcaactccatggccttttgcttcattttctttcctttatctccggctatcacttcattgatc 4617172  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    |||||  ||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  4617173 agctttgccaactcctctctcttcacattcgtatcgatttccataccaatctcccattcattacaaataaatctacagtctgttggctggtcggcaaaaa 4617272  T
Q  229 gtggccaacacaacattggcact 251  Q
     ||||||||||||||||||||||    
T  4617273 atggccaacacaacattggcact 4617295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 4601840 - 4602062
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    |||||||||| |||||||| ||||||  |||  ||||||||| ||||||||| |||  ||||| ||||| |||| ||||||| |||||| ||||||||||    
T  4601840 acaaccacctagtctagtgctctcctttgccatcttcttcaactccatggccttttgcctcatcttcttgcctttatctccggctatcacttcattgatc 4601939  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||    
T  4601940 agcttcgccaactcctctctcttcacatttgtatcgatttccataccaatctcccattcattacaaataaatctacagtttgttggctgatcggcaaaaa 4602039  T
Q  229 gtggccaacacaacattggcact 251  Q
      |||||||||||||| ||||||    
T  4602040 aaggccaacacaacatcggcact 4602062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 4516372 - 4516590
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    ||||||||||||||| |||| |||||| |||  ||||||||||||||||||| |||  ||||| |||||||||| ||||||  | || ||||||||||||    
T  4516372 acaaccacctggtcttgtgtcctcctctgccttcttcttcaattccatggccttttgcctcatcttctttcctttatctcccaccattaattcattgatc 4516471  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    |||||| |||||||||||||||||||||| ||||| |||||    ||||||| ||||||||| |||||| |||| || | ||||||||| ||||||||||    
T  4516472 agcttctccacctcctctctcttcacattggtatcaatttctgctccaatctcccattcattgcaaatatatctgcaatttgttggctgctcagcaaaaa 4516571  T
Q  229 gtggccaacacaacattgg 247  Q
      |||||||||||||||||    
T  4516572 aaggccaacacaacattgg 4516590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 62 - 247
Target Start/End: Complemental strand, 4256660 - 4256474
Alignment:
Q  62 cttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgta 161  Q
    |||||||||||||||| || |||  ||||| ||||||||||  |||||    ||||||||||||||||| ||| ||||||| |||||||||||||| |||    
T  4256660 cttcttcaattccatgaccttttgcctcatcttctttcctttttctcccgacatcaattcattgatcagattctccacctcatctctcttcacattagta 4256561  T
Q  162 tcgatttccataccaatcttccattcattacaaataaatctacagtctgttgg-ctgatcagcaaaaagtggccaacacaacattgg 247  Q
    | |||||| || ||||||| ||||||  |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  4256560 ttgatttcaattccaatctcccattcgctacaaataaatctacagtttgttggtctgatcagcaaaaaatggccaacacaacattgg 4256474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 45 - 247
Target Start/End: Complemental strand, 4260219 - 4260017
Alignment:
Q  45 gtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcct 144  Q
    ||||||||||| |||  | ||||||| |||||| || |||  ||||| ||||||||||| |||||    || | |||||||||||||||| ||||||| |    
T  4260219 gtgttctcctctgccttcctcttcaactccatgaccttttgcctcatcttctttccttcttctcctgacataatttcattgatcagcttcgccacctcat 4260120  T
Q  145 ctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacat 244  Q
    |||| |||||||| ||||  ||||| || ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  4260119 ctcttttcacattagtattaatttcaattccaatctcccattcgttacaaataaatctacagtttgttggctgatcagcaaaaaatggccaacacaacat 4260020  T
Q  245 tgg 247  Q
    |||    
T  4260019 tgg 4260017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 4585687 - 4585909
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    |||||| || ||||| |||| ||||||||||  ||||||||| || || ||| |||  ||||| |||||||| |  |||||  | ||||||||||||| |    
T  4585687 acaacctccaggtctcgtgtcctcctccgccttcttcttcaactcgattgccttttgcctcatcttctttccattctctcccaccatcaattcattgacc 4585786  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    | |||| |||||||||||||||||||||| || || | |||||| ||||||| ||||||||| ||||||| |||||||| |||||||||||||||||  |    
T  4585787 aacttctccacctcctctctcttcacattggtgtcaacttccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatga 4585886  T
Q  229 gtggccaacacaacattggcact 251  Q
     ||||||||||||||||||||||    
T  4585887 atggccaacacaacattggcact 4585909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 4626002 - 4626220
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    ||||||||| || ||| |||||||||| |||  ||||||||| ||||||||| |||  ||||| |||||||| | ||||||  | |||||| ||||||||    
T  4626002 acaaccaccgggactaatgttctcctctgccttcttcttcaactccatggccttttgcctcatcttctttccgttatctcctgccatcaatgcattgatc 4626101  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    || ||| | ||| |||| ||||||||||| | |||||||||||| ||||||| ||||||||| |||||| ||||||| | |||||||||||||||||||     
T  4626102 agtttctctaccccctccctcttcacattagcatcgatttccattccaatctcccattcattgcaaatatatctacaatttgttggctgatcagcaaaat 4626201  T
Q  229 gtggccaacacaacattgg 247  Q
     ||||||||||| ||||||    
T  4626202 ttggccaacacagcattgg 4626220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 4592282 - 4592500
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    |||||| || ||||| ||||||||||| |||  ||||||||| || || ||| |||  ||||| ||||||||||  |||||  | ||||||||||||||     
T  4592282 acaacctccaggtctcgtgttctcctctgccttcttcttcaactcgattgcctttttcctcatcttctttcctttctctcccaccatcaattcattgata 4592381  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    || ||| |||||||||||||||| ||||| ||||| |||||||| ||||||| |||||||||  |||||| |||||||| |||||||||||||  ||| |    
T  4592382 agtttctccacctcctctctctttacattcgtatcaatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcactaaaga 4592481  T
Q  229 gtggccaacacaacattgg 247  Q
     ||||||||||||||||||    
T  4592482 atggccaacacaacattgg 4592500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 4560557 - 4560775
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    |||||| || ||||| |||| | ||||||||   |||||||  ||||||||| |||  ||||| |||||||||| ||||| |   ||||||||||||| |    
T  4560557 acaacctccaggtctcgtgtacacctccgcctttttcttcagctccatggccttttgcctcatcttctttcctttatctcaggacatcaattcattgacc 4560656  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    || ||| |||| ||||| ||||| ||||||||||| |||||  | ||||||||||||||||| |||||| |||| |||| || ||||||||| |||||||    
T  4560657 agtttctccacgtcctccctctttacatttgtatcaatttcgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaa 4560756  T
Q  229 gtggccaacacaacattgg 247  Q
     ||||||||||||||||||    
T  4560757 atggccaacacaacattgg 4560775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 4613799 - 4613577
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    |||||| |||||||| |||| |||||| |||  ||||||||| || || ||| |||  ||||| ||||||||||  |||||  | ||||||||||||| |    
T  4613799 acaacctcctggtctcgtgtcctcctctgccttcttcttcaactcaattgccttttgcctcattttctttcctttctctcccaccatcaattcattgacc 4613700  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    |||||| | ||||| |||||||||||||| || || |||||||| ||||| | ||||||||| || ||| |||| |||| || ||||||||| || ||||    
T  4613699 agcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctggctgatccgcgaaaa 4613600  T
Q  229 gtggccaacacaacattggcact 251  Q
     ||||||||||||||||||||||    
T  4613599 atggccaacacaacattggcact 4613577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 65 - 246
Target Start/End: Original strand, 4622229 - 4622410
Alignment:
Q  65 cttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcg 164  Q
    |||||| ||||||||| ||| |||||| |||||||||| ||||||    ||||||||||||||||| |||  |||||||||||| |||||||| |||| |    
T  4622229 cttcaactccatggccttttgtctcatcttctttcctttatctcccgacatcaattcattgatcagattcgacacctcctctcttttcacattagtattg 4622328  T
Q  165 atttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattg 246  Q
    ||||| || ||||||| ||||  ||| || ||| ||||||||| ||||||||||||||| |||| ||||||||||| |||||    
T  4622329 atttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattg 4622410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 62 - 249
Target Start/End: Original strand, 3171825 - 3172012
Alignment:
Q  62 cttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgta 161  Q
    ||||||||| |||||||||||||  ||||| ||||||||||  |||||  | |||||||| |||||||| ||| | |||||| ||||||| ||||| |||    
T  3171825 cttcttcaactccatggccctttgcctcatcttctttcctttctctcccaccatcaattcgttgatcagtttctctacctcccctctctttacattggta 3171924  T
Q  162 tcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattggca 249  Q
    || |||||||| |||||||||||||| |  ||||||| ||||| ||  | ||| ||||||||||||| ||||| ||||||||||||||    
T  3171925 tcaatttccatcccaatcttccattcttggcaaataattctactgttaggtggttgatcagcaaaaaatggcctacacaacattggca 3172012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 4480744 - 4480966
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    ||||||||| ||||| |||| |||||| |||  ||||||||| ||||||||| |||   |||| ||||||||||  |||||  | | ||||||||||||     
T  4480744 acaaccaccaggtcttgtgtcctcctctgccatcttcttcaactccatggccttttgcttcatcttctttcctttctctcccaccaacaattcattgatt 4480843  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    | | || |||| || |||||||||||||| ||||||||||| |  ||||||| ||||||||| ||||||| ||||| ||  | ||||||||| ||||| |    
T  4480844 aacctctccacatcttctctcttcacattggtatcgatttcgagtccaatctcccattcattgcaaataattctacggttaggtggctgatcggcaaaga 4480943  T
Q  229 gtggccaacacaacattggcact 251  Q
     ||||||||||||||||||||||    
T  4480944 atggccaacacaacattggcact 4480966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 247
Target Start/End: Original strand, 4563847 - 4563980
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    |||||||||||||  || ||| ||||||| |||||||| ||||| |||||||||||||| ||||||| |||||||||  |||||| |||||||| |||||    
T  4563847 atcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttg 4563946  T
Q  214 gctgatcagcaaaaagtggccaacacaacattgg 247  Q
    |||||||| |||| | ||||||||||||||||||    
T  4563947 gctgatcaccaaagaatggccaacacaacattgg 4563980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 4574417 - 4574577
Alignment:
Q  87 ctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccatt 186  Q
    ||||| |||||||||| |||||||   ||||||||||||| ||| ||| |||||||||| ||||| ||||| |||||||||||| | ||||||| |||||    
T  4574417 ctcatcttctttcctttatctccggacatcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccatt 4574516  T
Q  187 cattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattgg 247  Q
    |||| |||||| |||| |||| || ||||||||| | ||||| ||||||||| ||||||||    
T  4574517 cattgcaaatatatctgcagtttgctggctgatccgaaaaaaatggccaacataacattgg 4574577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 29 - 247
Target Start/End: Original strand, 4571023 - 4571241
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    ||||||||| ||||| |||| ||||||||||  ||||||||  |||||     |||  ||||| |||||||||| ||||||  | ||||||||||||| |    
T  4571023 acaaccaccaggtctcgtgtcctcctccgccttcttcttcatctccattatatttttcctcatcttctttcctttatctcccaccatcaattcattgacc 4571122  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    |  ||| ||||||| | |||||||||||| ||||||||||| || ||||||| ||||  ||| || ||| ||||||||| || |||||||||||||||||    
T  4571123 aaattctccacctcatttctcttcacattagtatcgatttcgattccaatctcccatgtattgcagatatatctacagtttgctggctgatcagcaaaaa 4571222  T
Q  229 gtggccaacacaacattgg 247  Q
     |||| |||||||||||||    
T  4571223 atggctaacacaacattgg 4571241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 4267162 - 4267025
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    |||||||||||||  | |||| | || || ||||||||||||||||||| |||||| |  ||||||| ||||||||  |||||||||||||||| |||||    
T  4267162 atcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatctcccattcatagcaaataaatctacagtttgttg 4267063  T
Q  214 gctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    |||||||| |||| | ||||||||||||||||||||||    
T  4267062 gctgatcaccaaagaatggccaacacaacattggcact 4267025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 4457730 - 4457867
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    |||||||||||||  | |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||| ||||||||||||||   |||||    
T  4457730 atcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaataaatctacaacttgttg 4457829  T
Q  214 gctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    ||| |||| |||| | |||||||| || ||||||||||    
T  4457830 gcttatcaccaaagaatggccaacgcagcattggcact 4457867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 4469939 - 4470076
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    |||||||||||||  |||||| ||||||| ||||||||||||| | |||||||||| |  ||||||| ||||||||| |||||||||||||| | || |     
T  4469939 atcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatctcccattcattgcaaataaatctacaatttgcta 4470038  T
Q  214 gctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    |||||||| |||| | ||||||||||||||||||||||    
T  4470039 gctgatcaccaaagaatggccaacacaacattggcact 4470076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 4515117 - 4514980
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    |||||||||||||  |||||  | ||||||||||||||||||||  |||||||||| || ||||||| ||||||||| |||||||||||||||| |||||    
T  4515117 atcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaatctcccattcattgcaaataaatctacagtttgttg 4515018  T
Q  214 gctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    | |||||| |||| | | ||||||| | ||||||||||    
T  4515017 gttgatcaccaaagaattgccaacaaagcattggcact 4514980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 247
Target Start/End: Original strand, 4557240 - 4557394
Alignment:
Q  93 ttctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattac 192  Q
    ||||||||||  || || || ||||||||||||| ||  ||| | ||||| |||||||||||||| || || |||||||| ||||||| ||||  ||| |    
T  4557240 ttctttcctttctccccctccatcaattcattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatctcccatgtattgc 4557339  T
Q  193 aaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattgg 247  Q
    ||||| |||| |||| || ||||||||||||||||| ||||||||||||||||||    
T  4557340 aaatatatctgcagtttgctggctgatcagcaaaaaatggccaacacaacattgg 4557394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 4568195 - 4568325
Alignment:
Q  117 aattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggct 216  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||| ||||| || || |||| | | | |||||||||| |||| |||| ||||||||    
T  4568195 aattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttcgattccgatctccaacttattacaaatatatctgcagtatgttggct 4568294  T
Q  217 gatcagcaaaaagtggccaacacaacattgg 247  Q
    | |||| |||||  |||||||| ||||||||    
T  4568295 gctcagaaaaaaaaggccaacataacattgg 4568325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 4461259 - 4461396
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    |||||||| |||| || |||| ||||||| || |||||||||| | |||||||||| |  ||||||| |||||  || |||||||||||||||| || ||    
T  4461259 atcaattcgttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaatctcccatttgttgcaaataaatctacagtttgctg 4461358  T
Q  214 gctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    |||||||| |||| | ||||||||||||||| ||||||    
T  4461359 gctgatcaccaaagaatggccaacacaacatcggcact 4461396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 251
Target Start/End: Complemental strand, 4490403 - 4490214
Alignment:
Q  62 cttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgta 161  Q
    ||||||||| ||| | ||| |||  ||||| ||||||||||  |||||  | ||||||||||||||||| ||| | ||||| |||||||| ||||| |||    
T  4490403 cttcttcaactccgtcgccttttgcctcatcttctttcctttctctcccaccatcaattcattgatcagtttctctacctcttctctctttacattggta 4490304  T
Q  162 tcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    || |||| ||| ||||||| |||||| |  ||||||| ||||| |     ||| ||||||||||||| ||||||||||||||||||||||    
T  4490303 tcaattttcatcccaatctcccattcttcgcaaataattctactgctaagtggttgatcagcaaaaaatggccaacacaacattggcact 4490214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 251
Target Start/End: Original strand, 4598280 - 4598444
Alignment:
Q  87 ctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccatt 186  Q
    ||||| |||||||||| ||||||    |||||||| |||| ||||||| |||||||||||||||||||||| || || ||||  || ||||||| |||||    
T  4598280 ctcattttctttcctttatctcccgacatcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattttgattccaatctcccatt 4598379  T
Q  187 cattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    |||| |||||| |||| ||||  | | ||||||| || ||||  || ||||||||||||||||||    
T  4598380 cattgcaaatatatctgcagttggcttgctgatccgcgaaaaagggacaacacaacattggcact 4598444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 247
Target Start/End: Original strand, 4579493 - 4579701
Alignment:
Q  39 ggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatcagcttcacca 138  Q
    ||||| |||| ||||||| ||  ||||||||| || || ||| |||  ||||| |||||| |||  |||||  | ||||||||||| | ||||||| |||    
T  4579493 ggtctcgtgtcctcctccaccttcttcttcaactcaattgccttttgcctcatcttctttgctttctctcccaccatcaattcattaaccagcttctcca 4579592  T
Q  139 cctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaaca 238  Q
    ||||||||||||||||||| || |||||||| || ||||| ||||||  ||| || | | |||| |||  |  ||| |||||||| |||| |||||||||    
T  4579593 cctcctctctcttcacattagtgtcgatttcaattccaattttccatgtattgcataaatatctgcagcttactgggtgatcagcgaaaaatggccaaca 4579692  T
Q  239 caacattgg 247  Q
    |||||||||    
T  4579693 caacattgg 4579701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 185
Target Start/End: Complemental strand, 4299742 - 4299671
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccat 185  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| || ||||||| ||||    
T  4299742 atcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatctcccat 4299671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 4506023 - 4506130
Alignment:
Q  144 tctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaaca 243  Q
    ||||| |||||||| ||||| ||||| || ||||||| | ||||||| |||||||||||||||| |||||| |||||| |||| |  |||||||||| ||    
T  4506023 tctctattcacattagtatcaatttcgattccaatctccaattcattgcaaataaatctacagtttgttggttgatcaccaaagaacggccaacacagca 4506122  T
Q  244 ttggcact 251  Q
    ||||||||    
T  4506123 ttggcact 4506130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 4493137 - 4493228
Alignment:
Q  160 tatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    |||||||||| |  ||||||| | ||||||| ||||| |||||||||| |||||||||||||  ||| |  |||||||||||||||||||||    
T  4493137 tatcgatttctactccaatctccaattcattgcaaatcaatctacagtttgttggctgatcactaaagaaaggccaacacaacattggcact 4493228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 4504478 - 4504256
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    |||||||||  |||| |||| |||||| |||  ||||||||| ||||||||| |||  ||||| ||||||||||  |||||  | ||||||||||| ||     
T  4504478 acaaccaccaagtcttgtgtcctcctctgccttcttcttcaactccatggccttttgcctcatcttctttcctttctctcccaccatcaattcattaata 4504379  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    || ||| | ||||| |||||||  ||||| | ||| || | ||| ||||||| |||||| |  |||||||   | |  |    ||||||||||| |||||    
T  4504378 agtttctctacctcttctctctgtacattggcatcaatcttcatcccaatctcccattcttcgcaaataatgttgctattaagtggctgatcagaaaaaa 4504279  T
Q  229 gtggccaacacaacattggcact 251  Q
     ||||||||||||||||||||||    
T  4504278 atggccaacacaacattggcact 4504256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 29 - 251
Target Start/End: Original strand, 1674277 - 1674499
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    ||||||||||||||||||||||||||| |||  ||||||||||||||||||| |||  ||||| || ||||| |  |||||  | ||||||||||||||     
T  1674277 acaaccacctggtctagtgttctcctctgccttcttcttcaattccatggccttttgcctcatcttttttccattctctcccaccatcaattcattgata 1674376  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    |||||| |||   |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1674377 agcttctccaaaccctctctcttcacattcgtatcaatttccataccaatcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaa 1674476  T
Q  229 gtggccaacacaacattggcact 251  Q
     ||||||||||||||||||||||    
T  1674477 atggccaacacaacattggcact 1674499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 16686290 - 16686130
Alignment:
Q  87 ctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccatt 186  Q
    ||||| ||||||||||  |||||  | ||||||||||||| ||  ||| ||||||| |||||||||||||| || || |||||||| ||||||| |||||    
T  16686290 ctcatcttctttcctttctctcccaccatcaattcattgaccaatttctccacctcatctctcttcacattggtgtcaatttccatgccaatctcccatt 16686191  T
Q  187 cattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattgg 247  Q
    |||| |||||| |||| || | || ||||||||||||||||| ||||||||||||||||||    
T  16686190 cattgcaaatatatctgcattttgctggctgatcagcaaaaaatggccaacacaacattgg 16686130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 20863839 - 20863702
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    ||||||||||| | |||| || |||||||||||||||| ||||| || || ||||| || ||||||| |||||  || |||||  |||| |||| ||| |    
T  20863839 atcaattcatttaccagcatctccacctcctctctcttgacattggtgtcaatttcgatcccaatctcccatttgttgcaaatgtatctgcagtttgtcg 20863740  T
Q  214 gctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  20863739 gctgatcagcaaaaaatggccagcacaacattggcact 20863702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 251
Target Start/End: Complemental strand, 28000180 - 27999958
Alignment:
Q  29 acaaccacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatc 128  Q
    ||||||||||||||||||||||||||| |||   |||||||| ||||||||| |||  ||||| || ||||| |  |||||  | ||||||||||||||     
T  28000180 acaaccacctggtctagtgttctcctctgcctttttcttcaactccatggccttttgcctcatcttttttccattctctcccaccatcaattcattgata 28000081  T
Q  129 agcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaa 228  Q
    |||||| |||  |||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28000080 agcttctccaaatcctctatcttcacattcatatcaatttccataccaatcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaa 27999981  T
Q  229 gtggccaacacaacattggcact 251  Q
     || |||||||||||||||||||    
T  27999980 atgaccaacacaacattggcact 27999958  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 24103135 - 24103272
Alignment:
Q  114 atcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    |||||||||||||  | |||| | || || |||||||||||||||||||||||||| |  ||||||| ||||||||  |||||||||||||||| |||||    
T  24103135 atcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaatctcccattcatagcaaataaatctacagtttgttg 24103234  T
Q  214 gctgatcagcaaaaagtggccaacacaacattggcact 251  Q
    | |||||| |||| | ||||||||||||||||||||||    
T  24103235 gttgatcaccaaagaatggccaacacaacattggcact 24103272  T

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Target: scaffold0288 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 247
Target Start/End: Complemental strand, 3797 - 3582
Alignment:
Q  32 accacctggtctagtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatcagc 131  Q
    |||||||||||||||||||||||| |||  |||||| || |||| |||| |||  ||||| ||||||||||  |||||  |  ||||||||||||  |||    
T  3797 accacctggtctagtgttctcctctgccttcttctttaactccacggccttttgcctcatcttctttcctttctctcccaccgtcaattcattgactagc 3698  T
Q  132 ttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtg 231  Q
    ||| ||||||| |||||||||||||   |||||||||| |  ||||||| |||||| || |||||||||||||||| ||||||||||||| |||| | ||    
T  3697 ttctccacctcatctctcttcacatccatatcgatttcaagtccaatctcccattcgttgcaaataaatctacagtttgttggctgatcaccaaagaatg 3598  T
Q  232 gccaacacaacattgg 247  Q
    ||||||| | ||||||    
T  3597 gccaacaaagcattgg 3582  T

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Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 251
Target Start/End: Original strand, 3086529 - 3086693
Alignment:
Q  87 ctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcctctctcttcacatttgtatcgatttccataccaatcttccatt 186  Q
    ||||| |||||||||| ||||||  | ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| || ||||||| ||||     
T  3086529 ctcatcttctttcctttatctcccaccatcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctcccata 3086628  T
Q  187 cattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacattggcact 251  Q
     ||| || ||| ||||||||| | |||| |||||  || ||| ||||||||||||||||||||||    
T  3086629 tattgcagatatatctacagtttattggttgatctccataaaatggccaacacaacattggcact 3086693  T

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Target: scaffold0477 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 251
Target Start/End: Complemental strand, 4751 - 4545
Alignment:
Q  45 gtgttctcctccgccgccttcttcaattccatggccctttctctcatattctttccttcatctccgtctatcaattcattgatcagcttcaccacctcct 144  Q
    ||||||||||| |||  ||||||||| ||||||||| |||  ||||| ||| |||||| ||||||    ||||||||||||||||  |||   |||| ||    
T  4751 gtgttctcctctgccttcttcttcaactccatggccttttgcctcatcttcattcctttatctcccgacatcaattcattgatcatattcgttaccttct 4652  T
Q  145 ctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaagtggccaacacaacat 244  Q
    ||||||||||||| ||||| |||||||||||| ||| ||||  ||   | ||| | | | ||| |||||||||||| || |||| |||||||||||||||    
T  4651 ctctcttcacattagtatcaatttccataccagtctcccatatatgggagatataccgatagtttgttggctgatcggcgaaaaatggccaacacaacat 4552  T
Q  245 tggcact 251  Q
    |||||||    
T  4551 tggcact 4545  T

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Target: scaffold0475 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 3658 - 3581
Alignment:
Q  136 ccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg 213  Q
    |||||||||||||||||||||| | ||| |||||  | ||||||| ||||||||| |||||  ||||||||| |||||    
T  3658 ccacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaatgcatctacagtttgttg 3581  T

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