View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0556-INSERTION-3 (Length: 402)

Name: NF0556-INSERTION-3
Description: NF0556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0556-INSERTION-3
NF0556-INSERTION-3
[»] chr7 (74 HSPs)
chr7 (1-300)||(41702794-41703092)
chr7 (302-402)||(43266266-43266365)
chr7 (305-402)||(25628481-25628577)
chr7 (302-402)||(32934675-32934774)
chr7 (302-402)||(43266593-43266692)
chr7 (305-402)||(32068099-32068195)
chr7 (305-402)||(42618238-42618334)
chr7 (302-402)||(23058756-23058855)
chr7 (302-402)||(42617911-42618010)
chr7 (304-402)||(25628805-25628902)
chr7 (305-402)||(10600276-10600372)
chr7 (305-402)||(28890582-28890678)
chr7 (302-402)||(22081886-22081985)
chr7 (302-390)||(25453128-25453216)
chr7 (302-402)||(27138268-27138367)
chr7 (302-402)||(32068423-32068522)
chr7 (302-402)||(33828301-33828400)
chr7 (305-402)||(32934351-32934447)
chr7 (302-378)||(10600026-10600102)
chr7 (302-402)||(22081560-22081658)
chr7 (305-402)||(39274873-39274969)
chr7 (305-382)||(46204424-46204501)
chr7 (302-394)||(32680900-32680992)
chr7 (311-402)||(13050109-13050200)
chr7 (74-201)||(46691849-46691978)
chr7 (305-402)||(25453455-25453551)
chr7 (321-402)||(28469337-28469417)
chr7 (302-402)||(23058429-23058528)
chr7 (321-402)||(6571032-6571112)
chr7 (321-402)||(10935813-10935893)
chr7 (321-402)||(32299034-32299114)
chr7 (302-394)||(32680595-32680687)
chr7 (311-385)||(32687406-32687480)
chr7 (321-402)||(6253490-6253570)
chr7 (321-402)||(17102039-17102119)
chr7 (311-376)||(18087692-18087757)
chr7 (321-402)||(19204508-19204588)
chr7 (321-402)||(22871606-22871686)
chr7 (321-402)||(42731438-42731518)
chr7 (314-385)||(18855999-18856070)
chr7 (324-402)||(23181323-23181400)
chr7 (302-380)||(30948479-30948557)
chr7 (302-380)||(34928650-34928728)
chr7 (302-380)||(34928969-34929047)
chr7 (302-380)||(39686853-39686931)
chr7 (1-47)||(49036025-49036071)
chr7 (321-402)||(16803974-16804054)
chr7 (321-402)||(45010933-45011013)
chr7 (77-132)||(49035928-49035983)
chr7 (321-402)||(5457236-5457316)
chr7 (321-402)||(27991758-27991838)
chr7 (321-390)||(42362469-42362538)
chr7 (144-201)||(42598057-42598114)
chr7 (305-402)||(46205636-46205732)
chr7 (311-383)||(22828165-22828237)
chr7 (311-402)||(13044681-13044771)
chr7 (309-380)||(30948167-30948238)
chr7 (77-132)||(33320710-33320765)
chr7 (328-402)||(2640507-2640580)
chr7 (311-385)||(18086298-18086372)
chr7 (311-385)||(32688563-32688637)
chr7 (322-380)||(39686554-39686612)
chr7 (356-402)||(48789132-48789177)
chr7 (61-201)||(1039067-1039208)
chr7 (311-384)||(23608817-23608890)
chr7 (321-378)||(27396947-27397004)
chr7 (77-201)||(30655602-30655727)
chr7 (144-201)||(31424776-31424833)
chr7 (321-390)||(37656871-37656940)
chr7 (321-382)||(40379788-40379849)
chr7 (311-383)||(10092215-10092287)
chr7 (321-385)||(17886835-17886899)
chr7 (321-385)||(24388838-24388902)
chr7 (1-65)||(30655753-30655817)
[»] chr4 (94 HSPs)
chr4 (302-402)||(54858887-54858986)
chr4 (302-402)||(3032582-3032681)
chr4 (304-402)||(45463075-45463172)
chr4 (305-402)||(11523952-11524048)
chr4 (302-402)||(10408216-10408315)
chr4 (302-402)||(27069237-27069336)
chr4 (302-402)||(50504152-50504251)
chr4 (302-402)||(54858560-54858659)
chr4 (305-402)||(39701236-39701332)
chr4 (302-402)||(27068910-27069009)
chr4 (302-402)||(52573228-52573327)
chr4 (302-402)||(52573555-52573654)
chr4 (305-402)||(5818102-5818198)
chr4 (302-402)||(10407889-10407988)
chr4 (302-402)||(22987178-22987277)
chr4 (302-402)||(27149323-27149421)
chr4 (302-402)||(50503825-50503924)
chr4 (305-402)||(22717942-22718038)
chr4 (305-402)||(45463400-45463496)
chr4 (302-390)||(16605602-16605690)
chr4 (302-402)||(51859733-51859832)
chr4 (302-402)||(27891584-27891683)
chr4 (305-402)||(39667103-39667199)
chr4 (302-394)||(9400519-9400611)
chr4 (304-375)||(39666772-39666843)
chr4 (321-402)||(7451853-7451933)
chr4 (313-402)||(22718266-22718354)
chr4 (313-402)||(22923149-22923237)
chr4 (313-402)||(22927802-22927890)
chr4 (313-402)||(22984081-22984169)
chr4 (313-402)||(22986862-22986950)
chr4 (313-402)||(22997669-22997757)
chr4 (305-390)||(39700912-39700997)
chr4 (302-394)||(4982726-4982818)
chr4 (302-378)||(22567107-22567183)
chr4 (302-394)||(27934532-27934624)
chr4 (302-402)||(34765709-34765808)
chr4 (322-402)||(37248256-37248335)
chr4 (302-394)||(42738031-42738123)
chr4 (304-394)||(9400824-9400914)
chr4 (309-394)||(6236838-6236922)
chr4 (321-402)||(23613328-23613408)
chr4 (321-402)||(24711130-24711210)
chr4 (302-385)||(4983040-4983123)
chr4 (301-380)||(38012489-38012568)
chr4 (311-385)||(11446279-11446353)
chr4 (311-385)||(32063681-32063755)
chr4 (64-201)||(32183268-32183409)
chr4 (302-380)||(34837074-34837152)
chr4 (302-380)||(34837393-34837471)
chr4 (302-380)||(42738350-42738428)
chr4 (302-380)||(51203609-51203687)
chr4 (324-402)||(52909275-52909352)
chr4 (321-402)||(5368966-5369046)
chr4 (309-394)||(6237156-6237241)
chr4 (321-402)||(13058056-13058136)
chr4 (321-402)||(14801755-14801835)
chr4 (77-202)||(16572075-16572199)
chr4 (321-402)||(18831368-18831448)
chr4 (321-394)||(33247293-33247366)
chr4 (321-402)||(44967367-44967447)
chr4 (321-402)||(50418966-50419046)
chr4 (325-402)||(50750910-50750986)
chr4 (325-402)||(55867443-55867519)
chr4 (310-378)||(27934839-27934907)
chr4 (302-402)||(35508569-35508668)
chr4 (302-402)||(50751827-50751925)
chr4 (326-381)||(8438305-8438359)
chr4 (309-380)||(9144773-9144844)
chr4 (5-201)||(25641273-25641476)
chr4 (321-400)||(51692572-51692650)
chr4 (302-380)||(9145085-9145163)
chr4 (311-388)||(30641529-30641604)
chr4 (302-380)||(32950142-32950220)
chr4 (302-380)||(32950461-32950539)
chr4 (302-380)||(38012170-38012248)
chr4 (328-402)||(54087024-54087097)
chr4 (311-376)||(30642500-30642565)
chr4 (305-394)||(33247578-33247667)
chr4 (321-390)||(39539258-39539327)
chr4 (321-402)||(49879505-49879585)
chr4 (145-201)||(15186985-15187041)
chr4 (328-380)||(43155846-43155898)
chr4 (311-386)||(10203630-10203705)
chr4 (321-376)||(24711434-24711489)
chr4 (311-382)||(29321253-29321324)
chr4 (74-121)||(42390857-42390904)
chr4 (321-376)||(50418687-50418742)
chr4 (340-402)||(36009142-36009203)
chr4 (321-382)||(15508021-15508081)
chr4 (321-402)||(24411377-24411457)
chr4 (321-402)||(35028327-35028407)
chr4 (311-376)||(41582456-41582521)
chr4 (321-402)||(53701831-53701911)
[»] chr3 (83 HSPs)
chr3 (305-402)||(32306751-32306847)
chr3 (305-402)||(33156323-33156419)
chr3 (302-402)||(3469200-3469299)
chr3 (302-402)||(13948780-13948879)
chr3 (306-402)||(29118865-29118960)
chr3 (302-402)||(37778600-37778699)
chr3 (304-402)||(29686267-29686364)
chr3 (296-402)||(52032132-52032237)
chr3 (302-399)||(40788750-40788846)
chr3 (302-402)||(3469527-3469626)
chr3 (302-402)||(32306424-32306523)
chr3 (302-402)||(33506277-33506376)
chr3 (302-402)||(52032466-52032565)
chr3 (305-382)||(3596112-3596189)
chr3 (305-402)||(41421975-41422071)
chr3 (302-402)||(47551493-47551592)
chr3 (304-402)||(11910701-11910798)
chr3 (304-390)||(29118529-29118615)
chr3 (304-402)||(29685943-29686040)
chr3 (302-402)||(10294567-10294666)
chr3 (59-201)||(31525351-31525491)
chr3 (320-402)||(35643869-35643950)
chr3 (297-394)||(48322682-48322779)
chr3 (302-402)||(10294886-10294985)
chr3 (302-394)||(36314298-36314390)
chr3 (302-394)||(36314603-36314695)
chr3 (311-385)||(21186040-21186114)
chr3 (302-376)||(42855659-42855733)
chr3 (61-135)||(53349391-53349465)
chr3 (321-402)||(2796198-2796278)
chr3 (305-394)||(10770493-10770582)
chr3 (305-394)||(10770796-10770885)
chr3 (1-131)||(55166895-55167035)
chr3 (77-201)||(9358753-9358876)
chr3 (302-352)||(13949071-13949121)
chr3 (305-402)||(43998148-43998244)
chr3 (77-200)||(28934741-28934861)
chr3 (304-352)||(33506180-33506228)
chr3 (302-394)||(48322377-48322469)
chr3 (74-201)||(43073050-43073175)
chr3 (311-385)||(6956257-6956331)
chr3 (321-402)||(9294287-9294367)
chr3 (77-130)||(47820904-47820957)
chr3 (338-402)||(10307702-10307765)
chr3 (2-200)||(20701076-20701275)
chr3 (311-402)||(9368630-9368720)
chr3 (62-130)||(28956935-28957005)
chr3 (302-385)||(33154877-33154960)
chr3 (309-380)||(54466430-54466501)
chr3 (311-385)||(1079566-1079640)
chr3 (302-380)||(8041616-8041694)
chr3 (324-390)||(33689719-33689785)
chr3 (325-402)||(4323531-4323607)
chr3 (74-202)||(10454282-10454413)
chr3 (321-402)||(19741221-19741301)
chr3 (321-402)||(23458308-23458388)
chr3 (305-382)||(40788423-40788500)
chr3 (321-402)||(42342810-42342890)
chr3 (311-376)||(43607789-43607854)
chr3 (302-402)||(4322592-4322690)
chr3 (315-370)||(3596432-3596486)
chr3 (309-380)||(54466742-54466813)
chr3 (74-132)||(8431489-8431546)
chr3 (321-390)||(40506127-40506197)
chr3 (321-383)||(40758166-40758227)
chr3 (324-402)||(46474837-46474914)
chr3 (311-381)||(47856396-47856466)
chr3 (302-380)||(47921466-47921544)
chr3 (311-388)||(23276325-23276402)
chr3 (321-402)||(40033785-40033865)
chr3 (321-402)||(51994215-51994295)
chr3 (1-65)||(52075975-52076039)
chr3 (309-380)||(8041935-8042006)
chr3 (321-376)||(40758464-40758519)
chr3 (311-369)||(1078546-1078604)
chr3 (302-376)||(25107213-25107287)
chr3 (311-377)||(26479079-26479145)
chr3 (340-402)||(43384321-43384382)
chr3 (324-402)||(53756766-53756843)
chr3 (340-382)||(55052596-55052638)
chr3 (321-373)||(34142575-34142627)
chr3 (321-377)||(35712063-35712119)
chr3 (144-204)||(44656226-44656286)
[»] scaffold0328 (2 HSPs)
scaffold0328 (302-402)||(11467-11566)
scaffold0328 (305-402)||(11143-11239)
[»] chr1 (91 HSPs)
chr1 (302-402)||(40714444-40714543)
chr1 (302-402)||(49955674-49955773)
chr1 (302-402)||(40714770-40714869)
chr1 (301-402)||(17189178-17189278)
chr1 (302-390)||(17188954-17189042)
chr1 (302-402)||(20760832-20760931)
chr1 (302-402)||(31058384-31058483)
chr1 (302-402)||(49955347-49955446)
chr1 (296-402)||(28325131-28325235)
chr1 (301-402)||(30326495-30326595)
chr1 (302-402)||(12905986-12906085)
chr1 (302-402)||(31050950-31051049)
chr1 (302-390)||(37929418-37929506)
chr1 (302-402)||(45749842-45749941)
chr1 (302-402)||(45750169-45750268)
chr1 (59-201)||(26990589-26990729)
chr1 (305-402)||(35040941-35041037)
chr1 (302-402)||(8898517-8898616)
chr1 (302-402)||(8898844-8898943)
chr1 (59-134)||(47028919-47028994)
chr1 (59-201)||(12172942-12173082)
chr1 (302-394)||(28011673-28011765)
chr1 (304-402)||(44523465-44523562)
chr1 (302-363)||(25885358-25885419)
chr1 (302-394)||(24905167-24905259)
chr1 (302-390)||(28324805-28324892)
chr1 (302-385)||(32558450-32558533)
chr1 (321-402)||(6367581-6367661)
chr1 (310-402)||(14878979-14879070)
chr1 (296-380)||(52134387-52134471)
chr1 (323-402)||(26024444-26024522)
chr1 (302-368)||(7371529-7371595)
chr1 (321-383)||(25647903-25647965)
chr1 (321-390)||(23209667-23209736)
chr1 (321-402)||(24009870-24009950)
chr1 (321-402)||(34464468-34464548)
chr1 (77-130)||(43268679-43268732)
chr1 (305-381)||(35038458-35038534)
chr1 (1-64)||(26384877-26384940)
chr1 (323-402)||(41098754-41098832)
chr1 (302-380)||(33442594-33442672)
chr1 (328-402)||(46163056-46163129)
chr1 (305-390)||(7371293-7371378)
chr1 (321-402)||(7820973-7821053)
chr1 (77-198)||(8462976-8463097)
chr1 (321-402)||(13914396-13914476)
chr1 (321-402)||(17662179-17662259)
chr1 (321-390)||(19515838-19515907)
chr1 (311-388)||(32132313-32132390)
chr1 (321-402)||(34464778-34464858)
chr1 (321-402)||(36694577-36694657)
chr1 (321-402)||(36710678-36710758)
chr1 (321-390)||(37578532-37578601)
chr1 (311-379)||(10304206-10304274)
chr1 (302-390)||(19017969-19018057)
chr1 (304-380)||(33442913-33442989)
chr1 (321-377)||(42533043-42533099)
chr1 (324-402)||(1841481-1841558)
chr1 (324-402)||(40210699-40210776)
chr1 (62-108)||(42442105-42442151)
chr1 (302-380)||(52134068-52134146)
chr1 (65-201)||(19472791-19472928)
chr1 (321-402)||(35152362-35152442)
chr1 (321-402)||(40772526-40772606)
chr1 (321-402)||(42248492-42248572)
chr1 (302-402)||(5734010-5734108)
chr1 (302-346)||(25884701-25884745)
chr1 (325-385)||(31197088-31197148)
chr1 (74-134)||(31833898-31833957)
chr1 (309-372)||(4716475-4716538)
chr1 (321-376)||(13914087-13914142)
chr1 (309-380)||(31514325-31514396)
chr1 (309-380)||(31514636-31514707)
chr1 (321-376)||(35473650-35473705)
chr1 (302-385)||(44522147-44522230)
chr1 (356-402)||(1103515-1103560)
chr1 (324-402)||(4960562-4960639)
chr1 (311-385)||(10303932-10304006)
chr1 (1-67)||(38548593-38548659)
chr1 (321-371)||(40435364-40435414)
chr1 (321-383)||(47999439-47999501)
chr1 (156-201)||(28447802-28447847)
chr1 (1-46)||(30465186-30465231)
chr1 (321-402)||(32917279-32917359)
chr1 (77-134)||(41955959-41956016)
chr1 (311-375)||(9443581-9443645)
chr1 (300-376)||(26024746-26024822)
chr1 (321-385)||(34849030-34849094)
chr1 (321-385)||(34850410-34850474)
chr1 (321-377)||(35152683-35152739)
chr1 (66-130)||(46757301-46757365)
[»] scaffold0388 (2 HSPs)
scaffold0388 (305-402)||(12566-12662)
scaffold0388 (305-402)||(12249-12339)
[»] chr8 (76 HSPs)
chr8 (302-402)||(15229931-15230030)
chr8 (302-402)||(234067-234166)
chr8 (302-402)||(710478-710577)
chr8 (302-402)||(747690-747789)
chr8 (302-402)||(871585-871684)
chr8 (302-402)||(7983428-7983527)
chr8 (302-402)||(44664508-44664607)
chr8 (304-402)||(44664835-44664932)
chr8 (63-201)||(5200486-5200623)
chr8 (305-402)||(10445662-10445758)
chr8 (305-402)||(25124566-25124662)
chr8 (302-402)||(15230258-15230357)
chr8 (302-402)||(35634426-35634525)
chr8 (299-402)||(25124890-25124992)
chr8 (304-402)||(8998016-8998113)
chr8 (305-402)||(6471693-6471789)
chr8 (305-402)||(37542227-37542323)
chr8 (305-390)||(8997859-8997944)
chr8 (302-394)||(23505052-23505144)
chr8 (305-385)||(38003749-38003829)
chr8 (305-394)||(36325539-36325628)
chr8 (305-402)||(42945441-42945537)
chr8 (302-394)||(11674695-11674787)
chr8 (302-394)||(11674999-11675091)
chr8 (62-201)||(24200626-24200762)
chr8 (302-384)||(41353917-41353999)
chr8 (321-402)||(40318293-40318373)
chr8 (305-402)||(41353577-41353673)
chr8 (302-394)||(23507761-23507853)
chr8 (60-202)||(40930833-40930972)
chr8 (311-385)||(10749853-10749927)
chr8 (304-402)||(21432695-21432792)
chr8 (311-388)||(2535892-2535969)
chr8 (321-402)||(8316917-8316997)
chr8 (321-402)||(16388855-16388935)
chr8 (321-402)||(23663843-23663923)
chr8 (302-394)||(36325234-36325326)
chr8 (302-348)||(6472395-6472441)
chr8 (321-402)||(4994986-4995065)
chr8 (321-402)||(12273182-12273262)
chr8 (321-402)||(23698573-23698653)
chr8 (321-402)||(39071695-39071775)
chr8 (59-132)||(10124847-10124922)
chr8 (302-380)||(2266492-2266570)
chr8 (302-380)||(2266811-2266889)
chr8 (314-372)||(27500434-27500492)
chr8 (302-380)||(38845618-38845696)
chr8 (302-380)||(40775650-40775728)
chr8 (321-402)||(13186079-13186159)
chr8 (321-402)||(22915687-22915767)
chr8 (321-402)||(36928495-36928575)
chr8 (305-402)||(37542552-37542648)
chr8 (305-381)||(27500092-27500168)
chr8 (309-380)||(3041463-3041534)
chr8 (302-385)||(8746324-8746407)
chr8 (309-380)||(44406864-44406935)
chr8 (322-380)||(35449928-35449986)
chr8 (62-200)||(38086419-38086560)
chr8 (77-130)||(30836212-30836265)
chr8 (321-390)||(31608853-31608922)
chr8 (321-402)||(38955722-38955802)
chr8 (62-197)||(25829272-25829408)
chr8 (321-376)||(8316672-8316727)
chr8 (309-380)||(38845306-38845377)
chr8 (335-402)||(39474579-39474645)
chr8 (302-349)||(44407207-44407254)
chr8 (302-380)||(3041775-3041853)
chr8 (340-402)||(6472017-6472078)
chr8 (302-372)||(40775977-40776047)
chr8 (321-402)||(4405989-4406069)
chr8 (345-402)||(21433020-21433076)
chr8 (144-201)||(22839325-22839382)
chr8 (295-376)||(34060482-34060563)
chr8 (1-54)||(40930992-40931045)
chr8 (2-65)||(25829419-25829483)
chr8 (321-381)||(30459390-30459450)
[»] chr5 (60 HSPs)
chr5 (302-402)||(17544375-17544474)
chr5 (302-402)||(8875449-8875548)
chr5 (302-402)||(33871339-33871438)
chr5 (302-402)||(33871665-33871764)
chr5 (302-402)||(20152781-20152880)
chr5 (308-377)||(8875618-8875687)
chr5 (302-402)||(20153245-20153341)
chr5 (324-402)||(22298564-22298641)
chr5 (302-402)||(21287984-21288083)
chr5 (321-402)||(3529171-3529251)
chr5 (321-402)||(38475328-38475408)
chr5 (302-402)||(3656745-3656844)
chr5 (302-394)||(6758170-6758262)
chr5 (321-402)||(39453319-39453399)
chr5 (295-402)||(5993882-5993988)
chr5 (311-385)||(24141461-24141535)
chr5 (295-380)||(1505960-1506045)
chr5 (321-402)||(5024347-5024427)
chr5 (321-402)||(11761768-11761848)
chr5 (321-402)||(16082996-16083076)
chr5 (321-402)||(16157184-16157264)
chr5 (321-402)||(20814464-20814544)
chr5 (321-402)||(24547454-24547534)
chr5 (321-402)||(35512167-35512247)
chr5 (305-394)||(41930821-41930910)
chr5 (320-380)||(6757883-6757943)
chr5 (302-394)||(41930516-41930608)
chr5 (323-402)||(186440-186518)
chr5 (62-197)||(23172981-23173116)
chr5 (324-402)||(13362557-13362634)
chr5 (316-402)||(13962878-13962963)
chr5 (321-383)||(27587167-27587229)
chr5 (302-380)||(31482402-31482480)
chr5 (302-380)||(31482721-31482799)
chr5 (324-402)||(38442090-38442167)
chr5 (311-385)||(40148907-40148981)
chr5 (311-385)||(40150159-40150233)
chr5 (59-130)||(2292149-2292222)
chr5 (321-390)||(17202418-17202487)
chr5 (321-402)||(19892637-19892717)
chr5 (321-390)||(20840552-20840621)
chr5 (297-373)||(297009-297085)
chr5 (309-380)||(1506286-1506357)
chr5 (74-129)||(9931877-9931932)
chr5 (320-394)||(5256348-5256421)
chr5 (321-390)||(18247105-18247172)
chr5 (321-383)||(28771185-28771247)
chr5 (321-369)||(6150781-6150829)
chr5 (309-380)||(297333-297404)
chr5 (331-402)||(17544077-17544147)
chr5 (321-376)||(19892327-19892382)
chr5 (311-390)||(24204938-24205016)
chr5 (2-44)||(2292079-2292121)
chr5 (321-402)||(6150473-6150553)
chr5 (321-402)||(14194752-14194831)
chr5 (323-376)||(16156876-16156929)
chr5 (65-134)||(25539813-25539881)
chr5 (321-402)||(29646691-29646770)
chr5 (324-381)||(30005175-30005232)
chr5 (321-402)||(32242261-32242341)
[»] chr2 (49 HSPs)
chr2 (302-402)||(8710795-8710894)
chr2 (302-402)||(28226071-28226170)
chr2 (302-402)||(15604339-15604438)
chr2 (305-402)||(15604666-15604762)
chr2 (305-402)||(8342190-8342286)
chr2 (303-402)||(41588385-41588483)
chr2 (302-402)||(6573543-6573642)
chr2 (303-402)||(11830365-11830463)
chr2 (305-382)||(6573050-6573127)
chr2 (305-390)||(8342517-8342602)
chr2 (302-402)||(41587235-41587333)
chr2 (302-402)||(25892394-25892493)
chr2 (311-385)||(202701-202775)
chr2 (321-402)||(39498329-39498409)
chr2 (321-402)||(44714090-44714170)
chr2 (302-385)||(14900795-14900878)
chr2 (311-385)||(6589704-6589778)
chr2 (321-402)||(15848107-15848187)
chr2 (302-378)||(14900496-14900572)
chr2 (297-380)||(13995668-13995751)
chr2 (74-201)||(14732344-14732470)
chr2 (323-402)||(16099076-16099154)
chr2 (302-380)||(1695740-1695818)
chr2 (302-380)||(13995992-13996070)
chr2 (311-381)||(28228679-28228749)
chr2 (302-380)||(33062050-33062128)
chr2 (302-380)||(33062369-33062447)
chr2 (302-380)||(33739703-33739781)
chr2 (321-402)||(2318178-2318257)
chr2 (321-402)||(10712742-10712822)
chr2 (321-382)||(11163371-11163432)
chr2 (313-385)||(3652222-3652294)
chr2 (323-402)||(22051322-22051400)
chr2 (297-380)||(33740022-33740105)
chr2 (74-204)||(41419620-41419751)
chr2 (311-385)||(28230084-28230158)
chr2 (296-402)||(36382155-36382260)
chr2 (324-402)||(36479740-36479817)
chr2 (311-385)||(39936592-39936665)
chr2 (302-380)||(41248878-41248956)
chr2 (311-376)||(199030-199095)
chr2 (321-402)||(45556131-45556211)
chr2 (309-380)||(1696059-1696130)
chr2 (309-380)||(41248566-41248637)
chr2 (311-385)||(43742021-43742095)
chr2 (336-385)||(3653425-3653473)
chr2 (321-402)||(6657897-6657977)
chr2 (321-390)||(34447832-34447901)
chr2 (74-134)||(38908672-38908731)
[»] chr6 (49 HSPs)
chr6 (303-390)||(7905244-7905331)
chr6 (305-402)||(7160807-7160903)
chr6 (305-402)||(22502777-22502873)
chr6 (302-382)||(6517503-6517583)
chr6 (302-402)||(22503101-22503200)
chr6 (305-402)||(21836035-21836130)
chr6 (305-402)||(31407205-31407301)
chr6 (302-402)||(21836357-21836456)
chr6 (302-394)||(32593490-32593582)
chr6 (302-379)||(31406878-31406955)
chr6 (302-385)||(10781147-10781230)
chr6 (302-402)||(7161131-7161230)
chr6 (305-402)||(7905570-7905666)
chr6 (305-402)||(15913551-15913647)
chr6 (321-402)||(30803880-30803960)
chr6 (303-394)||(14196920-14197011)
chr6 (302-380)||(14196615-14196693)
chr6 (305-402)||(12065223-12065319)
chr6 (302-383)||(15913893-15913974)
chr6 (305-394)||(25485956-25486045)
chr6 (302-380)||(362870-362948)
chr6 (321-390)||(30337468-30337537)
chr6 (297-380)||(363149-363232)
chr6 (62-130)||(15859084-15859154)
chr6 (302-380)||(22373007-22373085)
chr6 (321-402)||(21628042-21628122)
chr6 (321-402)||(33517553-33517633)
chr6 (302-394)||(28000690-28000782)
chr6 (336-390)||(10781496-10781550)
chr6 (321-402)||(3059276-3059356)
chr6 (325-402)||(8089466-8089542)
chr6 (321-402)||(12080655-12080735)
chr6 (311-376)||(28498379-28498444)
chr6 (2-131)||(33984672-33984814)
chr6 (145-201)||(6575797-6575853)
chr6 (302-394)||(25486231-25486323)
chr6 (325-385)||(26463202-26463262)
chr6 (321-376)||(30337772-30337827)
chr6 (323-402)||(30725781-30725858)
chr6 (311-381)||(141089-141159)
chr6 (311-381)||(149110-149180)
chr6 (302-380)||(22367425-22367503)
chr6 (1-67)||(33112865-33112931)
chr6 (329-382)||(3176376-3176429)
chr6 (321-402)||(17734492-17734572)
chr6 (1-54)||(34761078-34761131)
chr6 (311-371)||(139817-139875)
chr6 (311-371)||(147838-147896)
chr6 (309-349)||(28000392-28000432)
[»] scaffold0771 (2 HSPs)
scaffold0771 (302-402)||(920-1019)
scaffold0771 (302-352)||(1211-1261)
[»] scaffold0006 (2 HSPs)
scaffold0006 (302-402)||(222116-222215)
scaffold0006 (305-402)||(221794-221889)
[»] scaffold0599 (1 HSPs)
scaffold0599 (304-402)||(2395-2492)
[»] scaffold0042 (1 HSPs)
scaffold0042 (304-402)||(12107-12204)
[»] scaffold0205 (2 HSPs)
scaffold0205 (302-394)||(21009-21101)
scaffold0205 (302-380)||(21288-21366)
[»] scaffold0031 (1 HSPs)
scaffold0031 (321-402)||(68984-69064)
[»] scaffold0020 (1 HSPs)
scaffold0020 (321-383)||(139691-139753)
[»] scaffold0008 (1 HSPs)
scaffold0008 (311-385)||(239896-239970)
[»] scaffold0007 (1 HSPs)
scaffold0007 (321-402)||(1788-1868)
[»] scaffold0005 (1 HSPs)
scaffold0005 (321-402)||(37892-37972)
[»] scaffold0075 (1 HSPs)
scaffold0075 (321-383)||(14737-14799)
[»] scaffold0024 (2 HSPs)
scaffold0024 (302-380)||(141913-141991)
scaffold0024 (309-380)||(141601-141672)
[»] scaffold0559 (1 HSPs)
scaffold0559 (302-372)||(1233-1303)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 41702794 - 41703092
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattctcttttgtttagggttggtttttaaggggtatttgttcgagc 100  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41702794 tggtgttgatgcaagggtatgcatgtggtttgtcatatgtttatgcctgcgtcaattctcttttgtttagggttggtttttaaggggtttttgttcgagc 41702893  T
Q  101 cggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgggctaattggttgataatattttgc 200  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  41702894 cggtgtttgtgcggcaaccgacttccccttgtatgttttttttctccacccaaacttattagtgctccttgcacgggctagttggttgataatattttgt 41702993  T
Q  201 caatcnnnnnnnnnncatgatttttaggttttcaaaaatacattagcacaatttatgtcaaatatacaaaagaaaattttggtcaatgacattcaaaatt 300  Q
    ||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41702994 caat-aaaaaaaaaacatgatttttaggttttcaaaaatacattagcacaatttatgtcaaatatacaaaagaaaattttggtcaatgacattcaaaatt 41703092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 43266266 - 43266365
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||||||||    
T  43266266 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgca-ttgtttaatcat 43266364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 25628481 - 25628577
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||||||    
T  25628481 ttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgca-ttgtttaatcatt 25628577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 32934774 - 32934675
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||| |||||| ||||||||||||    
T  32934774 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttaca-ttgtttaatcat 32934676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 43266692 - 43266593
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||| || ||||||||||||    
T  43266692 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgca-ttgtttaatcat 43266594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 32068099 - 32068195
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  32068099 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 32068195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 42618334 - 42618238
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||| || |||||||||||||    
T  42618334 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 42618238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 23058855 - 23058756
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||  || ||||||||||||    
T  23058855 ggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgca-ttgtttaatcat 23058757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 42617911 - 42618010
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||| |||||||| |||||||||||| || ||||||||||||    
T  42617911 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 42618009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 25628902 - 25628805
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||| || |||||||||||||    
T  25628902 cttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 25628805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 10600372 - 10600276
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  10600372 ttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 10600276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 28890582 - 28890678
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||| ||||||||||||| || |||||||||||||    
T  28890582 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgca-ttgtttaatcatt 28890678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 22081985 - 22081886
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||||||   |||||||| ||||||||||||||||||||| || ||||||||||||    
T  22081985 ggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 22081887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 25453128 - 25453216
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||| |||||||| |||||||||||| ||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatt 25453216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 27138367 - 27138268
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||||||||  |||||||| |||||||| |||||||||||| || ||||||||||||    
T  27138367 ggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 27138269  T

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Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 32068522 - 32068423
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| ||  |||||||| |||||||| |||||||||||| || ||||||||||||    
T  32068522 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgca-ttgtttaatcat 32068424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 33828400 - 33828301
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||  |||||||| |||||||| |||||||||||| || ||||||||||||    
T  33828400 ggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 33828302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 32934351 - 32934447
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  32934351 ttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 32934447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 378
Target Start/End: Original strand, 10600026 - 10600102
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 378  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  10600026 ggctaaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcctggcaatt 10600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 22081560 - 22081658
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  | |||||| |||| |||||||||||||||| || ||||||||||||    
T  22081560 ggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtc-ctctaatcgctaatgctggcaatttacccttgca-ttgtttaatcat 22081657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 39274873 - 39274969
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||  |||||||| ||||||| | |||||||| || || |||||||||||||    
T  39274873 ttaatgatgtgttttgtccttgcaatttggcgttatttaaaaattagtctctgtaatcgctaatcctagtaatttacctttgca-ttgtttaatcatt 39274969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 46204424 - 46204501
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||| |||| |||||||||    
T  46204424 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttacc 46204501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 32680992 - 32680900
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| ||| ||||||| | |||||||||||||||| |||| || |||||    
T  32680992 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgtt 32680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 402
Target Start/End: Complemental strand, 13050200 - 13050109
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||| |||||||||||||||||| |||| ||| || |||  |||||||||||||||||| ||||||||||| || |||||||||||||    
T  13050200 atgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttacccttgcaattgtttaatcatt 13050109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 46691978 - 46691849
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatg--nnnnnnnnctccacccaaacttattagtgctccttg 171  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||||||          |||||||| | ||| |||||||| ||||    
T  46691978 tggtttttaaggggtttttgttcgagccggtgtttatgtggcaaccgatttccccttgtatgtattttttttctccacccgagcttgttagtgcttcttg 46691879  T
Q  172 cacgggctaattggttgataatattttgcc 201  Q
    ||||||||  |||||| |||||||||||||    
T  46691878 cacgggcttgttggttaataatattttgcc 46691849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 25453551 - 25453455
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||| ||||| ||||||||||||||||||||  || ||||| ||||||| ||||||||||||| || |||||||||||||    
T  25453551 ttaatgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttacccttgca-ttgtttaatcatt 25453455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 28469417 - 28469337
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||||| || |||||||||||||    
T  28469417 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgca-ttgtttaatcatt 28469337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 23058429 - 23058528
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||||||||||  ||||||   ||||||||||||| |||| || || ||||||||||||    
T  23058429 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcctggcaatataccattgca-ttgtttaatcat 23058527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 6571032 - 6571112
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||||||| |||||||||||| || |||||||||||||    
T  6571032 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgca-ttgtttaatcatt 6571112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 10935813 - 10935893
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  10935813 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 10935893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 32299114 - 32299034
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  32299114 tccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 32299034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 32680595 - 32680687
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||   |||||| | |||||||| ||||||| |||| || |||||    
T  32680595 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgtt 32680687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 32687406 - 32687480
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||||||| ||||||| ||||||||||| || |||  ||||||||||||||||||||| || |||||    
T  32687406 atgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgccctt 32687480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 6253490 - 6253570
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | || |||||||||||||    
T  6253490 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgca-ttgtttaatcatt 6253570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 17102039 - 17102119
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | || |||||||||||||    
T  17102039 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgca-ttgtttaatcatt 17102119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 18087757 - 18087692
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||| ||||||||||||||| |||||||||||||| |||| |||||||| ||||||| ||||    
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaa 18087692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 19204508 - 19204588
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||| ||| |||||||||| |||  ||||||||||||| |||||||||||||||| || |||||||||||||    
T  19204508 tccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgca-ttgtttaatcatt 19204588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 22871686 - 22871606
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||| |||  |||||| | ||||||| ||||||||||||| || |||||||||||||    
T  22871686 tccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgca-ttgtttaatcatt 22871606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 42731438 - 42731518
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | || |||||||||||||    
T  42731438 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgca-ttgtttaatcatt 42731518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 385
Target Start/End: Complemental strand, 18856070 - 18855999
Alignment:
Q  314 tgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    ||||| |||| |||||||||| |||||||||||||| |||  |||||||||||||| |||||| ||||||||    
T  18856070 tgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattaccctt 18855999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 402
Target Start/End: Complemental strand, 23181400 - 23181323
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||| |||||| ||| ||| ||||||||| ||||| ||||||||||||||| || |||||||||||||    
T  23181400 ttgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgca-ttgtttaatcatt 23181323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 30948557 - 30948479
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  30948557 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 30948479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 34928650 - 34928728
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  34928650 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34928728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 34929047 - 34928969
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  34929047 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34928969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 39686931 - 39686853
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  39686931 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 39686853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 49036071 - 49036025
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgct 47  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  49036071 tggtgttgacgcaggggtatgcatgtggtttgtcatatgtatatgct 49036025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 16804054 - 16803974
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||  |||||| ||||||||||||| || |||||||||||||    
T  16804054 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgca-ttgtttaatcatt 16803974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 45011013 - 45010933
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| ||  ||||| ||| ||||||| ||||||||||||| || |||||||||||||    
T  45011013 tccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgca-ttgtttaatcatt 45010933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 49035983 - 49035928
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgt 132  Q
    |||||||||||| ||||||||| ||||||||| || ||||||||| ||||||||||    
T  49035983 tttttaaggggtttttgttcgaaccggtgtttatgtggcaaccgatttccccttgt 49035928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 5457316 - 5457236
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||||||||||| |||| |||||||| ||  ||||||||||||    
T  5457316 tccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttca-atgtttaatcatt 5457236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 27991758 - 27991838
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||| |||||  ||  |||||||| ||||||||||||||||||| | || |||||||||||||    
T  27991758 tccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgca-ttgtttaatcatt 27991838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 42362469 - 42362538
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||||||||||| |||| |||||||| ||||    
T  42362469 tccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcatt 42362538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 42598057 - 42598114
Alignment:
Q  144 ctccacccaaacttattagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    |||||||||| |||||||||||| |||||||||| |  |||||| |||||||||||||    
T  42598057 ctccacccaagcttattagtgcttcttgcacgggtttgttggttaataatattttgcc 42598114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 46205732 - 46205636
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| || ||||||||||    ||||||||| ||| ||   ||||||||||||||||| ||| |||||||| || |||||||||||||    
T  46205732 ttaatgatgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattacccttgca-ttgtttaatcatt 46205636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 22828237 - 22828165
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    ||||||||  |||||| ||||||| |||||||||||||| |||  |||||||||||||| || ||| ||||||    
T  22828237 atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattaccc 22828165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 402
Target Start/End: Original strand, 13044681 - 13044771
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| | ||||||||||||||||| ||||||||| || |||   ||||||| || ||||| ||||||||| || || |||||||||||||    
T  13044681 atgtgtctcgtccttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgacaatttaccattgca-ttgtttaatcatt 13044771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 30948167 - 30948238
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  30948167 tgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 30948238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 33320710 - 33320765
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgt 132  Q
    |||||||||||  |||||||||||||||||||||  ||||||| | ||||||||||    
T  33320710 tttttaagggggttttgttcgagccggtgtttgtaaggcaaccaatttccccttgt 33320765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 2640580 - 2640507
Alignment:
Q  328 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||| ||| |||||||||| | |  |||||||| |||| |||||||||||||||| || |||||||||||||    
T  2640580 aattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgca-ttgtttaatcatt 2640507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 18086298 - 18086372
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| ||||||||||||||| ||| |||||||||| |||  ||||| || ||||||| |||| ||| ||||    
T  18086298 atgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagcctt 18086372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 32688637 - 32688563
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| | ||||||||||||| ||||||||||| || |||  |||||||| |||||||| ||| || |||||    
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgccctt 32688563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 39686554 - 39686612
Alignment:
Q  322 ccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  39686554 ccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 39686612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 402
Target Start/End: Complemental strand, 48789177 - 48789132
Alignment:
Q  356 tgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||| |||||||||||||||| || |||||||||||||    
T  48789177 tgtaatcgttaattctggcaatttacccttgca-ttgtttaatcatt 48789132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 201
Target Start/End: Complemental strand, 1039208 - 1039067
Alignment:
Q  61 ttttgtttagggttggttttt-aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttat 159  Q
    |||||||||| | |||||||| ||||||| ||||||||||||   ||||||   |||||||| || ||||||| ||         ||||||| | |||||    
T  1039208 ttttgtttagagatggttttttaaggggtttttgttcgagccaaagtttgtattgcaaccgattttcccttgtttgttttttttatccacccgagcttat 1039109  T
Q  160 tagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    ||||||| ||||||||||||  | |||| |||||||||||||    
T  1039108 tagtgcttcttgcacgggcttgtcggttaataatattttgcc 1039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 23608817 - 23608890
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccct 384  Q
    |||||||| |||||||||| |||| |||||||||||||| |||  |||| |  |||||||||||| ||| ||||    
T  23608817 atgtgtttagtccttgcaaataggggtcatttaaaaattggtccctgtatttcttaatcctggcattttgccct 23608890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 27397004 - 27396947
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 378  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| |||||    
T  27397004 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatt 27396947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 30655727 - 30655602
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgttt-gtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacg 175  Q
    |||||||| ||| |||||||||| || | ||| ||| ||||||||| |||||||||| ||         ||||||| | |||||||||||  ||||||||    
T  30655727 tttttaagaggtttttgttcgagtcgatattttgtgtggcaaccgatttccccttgtttgtattttttttccacccgagcttattagtgcgtcttgcacg 30655628  T
Q  176 ggctaattggttgataatattttgcc 201  Q
    ||||  |||||| |||||||||||||    
T  30655627 ggcttgttggttaataatattttgcc 30655602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 31424833 - 31424776
Alignment:
Q  144 ctccacccaaacttattagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    |||||||||| |||||||||| | |||||||||| |  |||||| |||||||||||||    
T  31424833 ctccacccaagcttattagtgtttcttgcacgggtttgttggttaataatattttgcc 31424776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 37656871 - 37656940
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||||||||||||  || |||||||||| |||  |||||||| ||||||| ||||||||| ||| ||||    
T  37656871 tccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcatt 37656940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 382
Target Start/End: Original strand, 40379788 - 40379849
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| ||||||||||    
T  40379788 tccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacc 40379849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 10092287 - 10092215
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    |||||||| |||| || ||||||| ||||| |||||||  |||  | ||||||||||||||||||| ||||||    
T  10092287 atgtgtttcgtccctgtaattaggggtcatgtaaaaatcggtccctataatcgttaatcctggcaaattaccc 10092215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 17886899 - 17886835
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    ||||||||||||||  |||||||||||||  || ||||| ||||||||||| ||||  |||||||    
T  17886899 tccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactaccctt 17886835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 24388838 - 24388902
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||| | ||| |||||||||| |||  |||| ||| ||||| |||||||||||||||    
T  24388838 tccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttaccctt 24388902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30655817 - 30655753
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattctcttttg 65  Q
    ||||||||||||| |||||||| ||||| ||||||| | |||||||  |||||| | ||||||||    
T  30655817 tggtgttgacgcaggggtatgcttgtggattgtcatttgtatatgccggcgtcattactcttttg 30655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 5e-38; HSPs: 94)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 54858986 - 54858887
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||    
T  54858986 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgca-ttgtttaatcat 54858888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 3032582 - 3032681
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||    
T  3032582 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 3032680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 45463075 - 45463172
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 45463172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 11523952 - 11524048
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| || |||||||||||||    
T  11523952 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgca-ttgtttaatcatt 11524048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 10408315 - 10408216
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||    
T  10408315 ggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 10408217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 27069336 - 27069237
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||| || ||||||||||||    
T  27069336 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgca-ttgtttaatcat 27069238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 50504251 - 50504152
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||| || ||||||||||||    
T  50504251 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgca-ttgtttaatcat 50504153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 54858560 - 54858659
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| || ||||||||||||    
T  54858560 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 54858658  T

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Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 39701332 - 39701236
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| || || |||||||||||||    
T  39701332 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgca-ttgtttaatcatt 39701236  T

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Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 27068910 - 27069009
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||    
T  27068910 ggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 27069008  T

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Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 52573228 - 52573327
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||   |||||||| ||||||||||||||||| |||||| ||||||||||||    
T  52573228 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttaca-ttgtttaatcat 52573326  T

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Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 52573654 - 52573555
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| || || ||||||||||||    
T  52573654 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgca-ttgtttaatcat 52573556  T

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Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 5818198 - 5818102
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| || |||||||||||||    
T  5818198 ttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgca-ttgtttaatcatt 5818102  T

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Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 10407889 - 10407988
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||| ||  |||||||| |||||||| |||||||||||| || ||||||||||||    
T  10407889 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 10407987  T

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Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 22987277 - 22987178
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |||||||| |||| ||||||| | |||||||||||||    
T  22987277 ggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgc-tttgtttaatcat 22987179  T

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Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 27149421 - 27149323
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||| || ||||||||||||    
T  27149421 ggcttaatgatgtgtttcgtccttgcaattaggcgtcattt-aaaattagtccctgtaattgctaatcctggcaatttacccttgca-ttgtttaatcat 27149324  T

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Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 50503825 - 50503924
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||| |||| ||||||||||||||| | ||||||||||||| || ||||||||||||    
T  50503825 ggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgca-ttgtttaatcat 50503923  T

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Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 22717942 - 22718038
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |||||||| |||| ||||||| | ||||||||||||||    
T  22717942 ttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgc-tttgtttaatcatt 22718038  T

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Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 45463496 - 45463400
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||| ||||||| || |||||||||||||    
T  45463496 ttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgca-ttgtttaatcatt 45463400  T

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Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 16605602 - 16605690
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||| || |||| |||||||||||| ||||    
T  16605602 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcatt 16605690  T

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Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 51859832 - 51859733
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||||  |||||||| |||||||||||||||| ||||  | ||||||||||||    
T  51859832 ggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgta-ttgtttaatcat 51859734  T

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Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 27891584 - 27891683
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||| | | |||||||||||||||  |||||||| ||||  ||||||||||||||| || ||||||||||||    
T  27891584 ggcttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttacccttgca-ttgtttaatcat 27891682  T

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Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 39667199 - 39667103
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||| ||||| | |||||||||||||| |||  |||||||||||||||||| || |||||||| || |||||||||||||    
T  39667199 ttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgca-ttgtttaatcatt 39667103  T

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Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 9400519 - 9400611
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 9400611  T

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Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 39666772 - 39666843
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggca 375  Q
    ||||||||||||||| ||| ||| ||||||  |||||||||||||||||||||||||||| |||||||||||    
T  39666772 cttaatgatgtgtttcgtctttgtaattagaagtcatttaaaaattagtcaatgtaatcgctaatcctggca 39666843  T

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Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 7451853 - 7451933
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||| | || |||||||||||||    
T  7451853 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgca-ttgtttaatcatt 7451933  T

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Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 22718354 - 22718266
Alignment:
Q  313 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||  ||||||||||||||||||||||| ||  |||||| ||||||||||||||||||| ||| || |||||||||||||    
T  22718354 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgca-ttgtttaatcatt 22718266  T

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Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 22923149 - 22923237
Alignment:
Q  313 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||  |||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||| || |||||||||||||    
T  22923149 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgca-ttgtttaatcatt 22923237  T

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Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 22927802 - 22927890
Alignment:
Q  313 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||  |||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||| || |||||||||||||    
T  22927802 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgca-ttgtttaatcatt 22927890  T

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Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 22984081 - 22984169
Alignment:
Q  313 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||  |||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||| || |||||||||||||    
T  22984081 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgca-ttgtttaatcatt 22984169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 22986862 - 22986950
Alignment:
Q  313 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||  ||||||||||||||||||||||| ||  |||||| ||||||||||||||||||| ||| || |||||||||||||    
T  22986862 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgca-ttgtttaatcatt 22986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 402
Target Start/End: Original strand, 22997669 - 22997757
Alignment:
Q  313 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||  |||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||| || |||||||||||||    
T  22997669 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgca-ttgtttaatcatt 22997757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 39700912 - 39700997
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||| |||||||  | ||||||||||||||| |||||||||||| || ||||||||| |||||||| |||| ||||||||||||    
T  39700912 ttaatggtgtgtttcattcttgcaattaggcgttatttaaaaattaatccatgtaatcgctaatcctgacaatatacccttacatt 39700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 4982726 - 4982818
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||| ||| ||||||||||| ||| ||||||| | ||||| |||||||||| |||| || |||||    
T  4982726 ggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaatttagccttgcaattgtt 4982818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 378
Target Start/End: Complemental strand, 22567183 - 22567107
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 378  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||| ||||||    
T  22567183 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 22567107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 27934532 - 27934624
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || ||||||||||||||| ||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  27934532 ggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 27934624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 34765808 - 34765709
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| ||  ||||||||| |||||||||||||||||| || || ||||||||||||    
T  34765808 ggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgca-ttgtttaatcat 34765710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 37248256 - 37248335
Alignment:
Q  322 ccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  37248256 ccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 37248335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 42738031 - 42738123
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| ||||||||||||| |||| |||| || |||||    
T  42738031 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccttgcaattgtt 42738123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 9400914 - 9400824
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||| || ||||||||||||||| ||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  9400914 cttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 9400824  T

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Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 394
Target Start/End: Original strand, 6236838 - 6236922
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||| ||| |||||||||||||| |||||||||||| ||||||  ||||||||||||||| || ||||||||||| || |||||    
T  6236838 tgatgtctttagtccttgcaattagacgtcatttaaaatttagtc-ttgtaatcgttaatcccgggaatttacccttgcaattgtt 6236922  T

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Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 23613328 - 23613408
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||| ||||| ||||||||||||| | || |||||||||||||    
T  23613328 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgca-ttgtttaatcatt 23613408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 24711130 - 24711210
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||||||||||||| || || |||||||||||||    
T  24711130 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgca-ttgtttaatcatt 24711210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 4983123 - 4983040
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||  ||  |||||| | ||||||| |||||||| ||||    
T  4983123 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagcctt 4983040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 380
Target Start/End: Complemental strand, 38012568 - 38012489
Alignment:
Q  301 gggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    ||||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  38012568 gggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38012489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 11446279 - 11446353
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||| |||||||||  |||||||||||||| ||  ||| |||||||||||||||||| ||||||||    
T  11446279 atgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattaccctt 11446353  T

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Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 32063755 - 32063681
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||| |||||||| |||||||||| |||||||||||||| ||   ||||||||||||| ||||||| ||||||||    
T  32063755 atgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattaccctt 32063681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 32183268 - 32183409
Alignment:
Q  64 tgtttagggttggttttt--aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnc-tccacccaaacttatt 160  Q
    ||||||||| ||||||||  ||||||| |||||||||||||||||||||  ||||||||| |||||||| | ||        | ||||||| | ||||||    
T  32183268 tgtttaggggtggttttttaaaggggtttttgttcgagccggtgtttgtatggcaaccgatttccccttctttgttttttttcttccacccgagcttatt 32183367  T
Q  161 agtgctccttgcacgggc-taattggttgataatattttgcc 201  Q
    ||||| |||||||||||| |  |||||| |||||||||||||    
T  32183368 agtgcgccttgcacgggcttgtttggttaataatattttgcc 32183409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 34837074 - 34837152
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  34837074 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 34837152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 34837471 - 34837393
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  34837471 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 34837393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 42738428 - 42738350
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  42738428 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 42738350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 51203609 - 51203687
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  51203609 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 51203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 52909275 - 52909352
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||| || ||||||| |||| |||||||| |||||||| |||||||||||| || |||||||||||||    
T  52909275 ttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 52909352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 5368966 - 5369046
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||  || |||||||||| |||  |||||||| ||||||||||||||||||| | || |||||||||||||    
T  5368966 tccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgca-ttgtttaatcatt 5369046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 394
Target Start/End: Complemental strand, 6237241 - 6237156
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||| ||| || ||| |||||||||||||||||||| ||||||  |||||| | ||||||||  |||||||||||||| |||||    
T  6237241 tgatgtctttagttcttacaattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttacccttacaattgtt 6237156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 13058056 - 13058136
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||| ||||||||| | || |||||||||||||    
T  13058056 tccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgca-ttgtttaatcatt 13058136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 14801755 - 14801835
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| ||||||||||||  | |||||||||||||    
T  14801755 tccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgta-ttgtttaatcatt 14801835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 202
Target Start/End: Original strand, 16572075 - 16572199
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgg 176  Q
    |||| ||||||| ||||||||| ||||||||| |||||||||||| ||||||||||||          ||||||| | |||||||||||  || ||||||    
T  16572075 ttttaaaggggt-tttgttcgaaccggtgtttttgcggcaaccgatttccccttgtatttattttttttccacccgagcttattagtgcatctcgcacgg 16572173  T
Q  177 gctaattggttgataatattttgcca 202  Q
    |||  |||||| ||||||||||||||    
T  16572174 gcttgttggttaataatattttgcca 16572199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 18831368 - 18831448
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||| |||||||| ||| |||||||||| |||  |||||||| ||||||||| ||||||||||| || |||||||||||||    
T  18831368 tccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgca-ttgtttaatcatt 18831448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 33247293 - 33247366
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| |||||||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  33247293 tccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 33247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 44967447 - 44967367
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||  ||| |||||||||| |||  |||||||| ||||||||||||||||||| | || |||||||||||||    
T  44967447 tccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgca-ttgtttaatcatt 44967367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 50419046 - 50418966
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| ||||||||||||| ||||||| || |||||||||||||    
T  50419046 tccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgca-ttgtttaatcatt 50418966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 50750910 - 50750986
Alignment:
Q  325 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||| |||  |||||||| |||||||||||| ||| |||| || |||||||||||||    
T  50750910 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgca-ttgtttaatcatt 50750986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 402
Target Start/End: Complemental strand, 55867519 - 55867443
Alignment:
Q  325 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||| ||| |||||||||| ||| ||||||||||||||||| ||||  ||||||| || |||||||||||||    
T  55867519 tgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgca-ttgtttaatcatt 55867443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 27934907 - 27934839
Alignment:
Q  310 gatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 378  Q
    |||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||| ||||||    
T  27934907 gatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatt 27934839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 35508668 - 35508569
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||  |||| |||| || ||||||||||| ||| ||||||||||| ||  ||||||||||||| ||  |||||||||||| || ||||||||||||    
T  35508668 ggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgca-ttgtttaatcat 35508570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 50751925 - 50751827
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||||||||||||   || |||||||||||||| |||||||||| |||  |||||||| |||||||| ||| ||| |||| || ||||||||||||    
T  50751925 ggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtc-ctgtaatcgctaatcctgacaaattaaccttgca-ttgtttaatcat 50751828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 8438305 - 8438359
Alignment:
Q  326 gcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||||    
T  8438305 gcaattaggggtcatttaaaaattggtca-tgtaatcgttaatcctggcaaattac 8438359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 9144773 - 9144844
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  9144773 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 9144844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 25641476 - 25641273
Alignment:
Q  5 gttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaatt---ctcttttgtttagggttggttttt--aaggggtatttgttcgag 99  Q
    ||||||||| ||||||||||||||| |||||| | |||||||  |||||||||    |||| |||||| || ||||||||  || |||| ||||||||||    
T  25641476 gttgacgcaggggtatgcatgtggtctgtcatttgtatatgccggcgtcaattaccttcttgtgtttatgggtggttttttaaaagggtttttgttcgag 25641377  T
Q  100 ccggtgtttgtgcggcaaccgacttccccttgtatg--nnnnnnnnctccacccaaacttattagtgctccttgcacgggctaattggttgataatattt 197  Q
    ||| |||| ||  ||||||| | |||||||| | ||          |||||||||| ||| |||||||| ||||||||||||  |||||| |||| ||||    
T  25641376 ccgatgttagtatggcaaccaatttccccttctttgtattttttttctccacccaagctttttagtgcttcttgcacgggcttgttggttaataacattt 25641277  T
Q  198 tgcc 201  Q
    ||||    
T  25641276 tgcc 25641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 51692572 - 51692650
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatca 400  Q
    |||||||||||||  ||| ||||||||||  || ||||||||| |||||||| |||||||||||| || |||||||||||    
T  51692572 tccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatca 51692650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 9145163 - 9145085
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||  |||  |||||| | ||||||||||| ||||    
T  9145163 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcatttta 9145085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 30641529 - 30641604
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttaca 388  Q
    |||||||| |||| | |||||||| |||||||||||||| |||  |||||||||||||||| |||| ||||| |||||    
T  30641529 atgtgtttcgtccctccaattaggggtcatttaaaaatttgtc--tgtaatcgttaatccttgcaaattaccattaca 30641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 32950142 - 32950220
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||   ||||| | ||||||||||| ||||    
T  32950142 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcctggcatttta 32950220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 32950539 - 32950461
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||| | |||||||||||| |||  |||||| | ||||||||||| ||||    
T  32950539 ggcttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 32950461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 38012170 - 38012248
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||  | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  38012170 ggcttattgatgtgttcagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38012248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 54087097 - 54087024
Alignment:
Q  328 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||| ||| |||||||||| |||  |||||||||||||| || |||||||||||| || |||||||||||||    
T  54087097 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgca-ttgtttaatcatt 54087024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 30642565 - 30642500
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||| |||| |||||||| | ||||||||||||||  ||| |||||||||||||||| ||||    
T  30642565 atgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaa 30642500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 33247667 - 33247578
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||| || |||||||||||||||  || |||||||||  |||  |||||| | |||||||||||||||| |||| || |||||    
T  33247667 ttaatgatgtgattagtccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 33247578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 39539327 - 39539258
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||| | ||| |||||||||| |||||||||||||||||| || |||| ||| |||| ||||    
T  39539327 tccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcatt 39539258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 49879585 - 49879505
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||| |  ||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  49879585 tccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 49879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 15187041 - 15186985
Alignment:
Q  145 tccacccaaacttattagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    ||||||||| |||||||||||  ||||||||||||  |||||| |||||||||||||    
T  15187041 tccacccaagcttattagtgcatcttgcacgggcttgttggttaataatattttgcc 15186985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 43155898 - 43155846
Alignment:
Q  328 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    ||||||| ||| |||||||||| |||  |||||||||||||||||||||||||    
T  43155898 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaattta 43155846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 386
Target Start/End: Original strand, 10203630 - 10203705
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctta 386  Q
    |||||||| |||| |  ||||| | ||||||||||||||||||| ||||||||||||| ||| ||| ||| |||||    
T  10203630 atgtgtttcgtccctataattaagggtcatttaaaaattagtcactgtaatcgttaattctgacaaattatcctta 10203705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Complemental strand, 24711489 - 24711434
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||||| ||| |||||||||| ||| |||| |||||||||||| ||||    
T  24711489 tccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaa 24711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 382
Target Start/End: Complemental strand, 29321324 - 29321253
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||||| ||||||||||||| | |||||||||||||| ||   | ||||||||||| ||||||| |||||    
T  29321324 atgtgtttcgtccttgcaattaagggtcatttaaaaattggtttctataatcgttaattctggcaaattacc 29321253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 121
Target Start/End: Complemental strand, 42390904 - 42390857
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccga 121  Q
    ||||||||||||||| |||||| ||||||||||||  |||||||||||    
T  42390904 tggtttttaaggggtttttgtttgagccggtgttttagcggcaaccga 42390857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 50418687 - 50418742
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||| ||||    
T  50418687 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaa 50418742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 402
Target Start/End: Complemental strand, 36009203 - 36009142
Alignment:
Q  340 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||| |||  |||||||||||||||||| ||||||||| | || |||||||||||||    
T  36009203 tttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgca-ttgtttaatcatt 36009142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 15508081 - 15508021
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| |||||||||    
T  15508081 tccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaatttacc 15508021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 24411377 - 24411457
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||| ||||||||| ||  |||||||||| |||  |||||||| ||| |||| |||||||||||| || |||||||||||||    
T  24411377 tcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgca-ttgtttaatcatt 24411457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 35028407 - 35028327
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||  |||||||||| ||| || |  ||| ||||||| ||||||||||||| || |||||||||||||    
T  35028407 tccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgca-ttgtttaatcatt 35028327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 41582456 - 41582521
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    ||||||||  ||| |||||| ||| |||||||||||||| |||  | |||||||||||||||||||    
T  41582456 atgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaa 41582521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 53701831 - 53701911
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||||||||||  ||  |||||||  |||||||| ||||||| |||| || |||||||||||||    
T  53701831 tccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgca-ttgtttaatcatt 53701911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 32306847 - 32306751
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 32306751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 33156419 - 33156323
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||    
T  33156419 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttca-ttgtttaatcatt 33156323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 3469200 - 3469299
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| || ||||||||||||    
T  3469200 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgca-ttgtttaatcat 3469298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 13948780 - 13948879
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||||| || ||||||||||||    
T  13948780 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgca-ttgtttaatcat 13948878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 306 - 402
Target Start/End: Complemental strand, 29118960 - 29118865
Alignment:
Q  306 taatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || || |||||||||||||    
T  29118960 taatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgca-ttgtttaatcatt 29118865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 37778699 - 37778600
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||| || ||||||||||||    
T  37778699 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgca-ttgtttaatcat 37778601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 29686364 - 29686267
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||||||| || |||||||||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttacccttgca-ttgtttaatcatt 29686267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 52032132 - 52032237
Alignment:
Q  296 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgttt 395  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||| ||||||||||||| || ||||||    
T  52032132 aaattaggtttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgca-ttgttt 52032230  T
Q  396 aatcatt 402  Q
    |||||||    
T  52032231 aatcatt 52032237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 302 - 399
Target Start/End: Complemental strand, 40788846 - 40788750
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatc 399  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||| || ||||||||||    
T  40788846 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgca-ttgtttaatc 40788750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 3469626 - 3469527
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||| || ||||||||||||    
T  3469626 ggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 3469528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 32306424 - 32306523
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||| || |||||||||||| || ||||||||||||    
T  32306424 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgca-ttgtttaatcat 32306522  T

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Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 33506376 - 33506277
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||||| |||||| ||||||||||||    
T  33506376 ggcttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttaca-ttgtttaatcat 33506278  T

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Target: chr3; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 52032565 - 52032466
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||| ||||||| || ||||||||||||    
T  52032565 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgca-ttgtttaatcat 52032467  T

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Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 3596112 - 3596189
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  3596112 ttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaatttacc 3596189  T

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Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 41421975 - 41422071
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||   |||||||||||||| || ||||||||||||||| |||||||||||||    
T  41421975 ttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttaca-ttgtttaatcatt 41422071  T

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Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 47551493 - 47551592
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||  |||||||| |||| |||||||||||||||| || ||||||||||||    
T  47551493 ggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgca-ttgtttaatcat 47551591  T

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Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 11910701 - 11910798
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| ||  |||||||| ||||||| ||||||||||||| || |||||||||||||    
T  11910701 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgca-ttgtttaatcatt 11910798  T

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Target: chr3; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 304 - 390
Target Start/End: Original strand, 29118529 - 29118615
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||| |||| |||||||||||||||| ||||    
T  29118529 cttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcatt 29118615  T

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Target: chr3; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 29685943 - 29686040
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||| |||| || |||||||||||||    
T  29685943 cttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgca-ttgtttaatcatt 29686040  T

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Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 10294567 - 10294666
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||| || ||||||||||||  | ||||||||||||    
T  10294567 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgta-ttgtttaatcat 10294665  T

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Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 31525351 - 31525491
Alignment:
Q  59 tcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaactta 158  Q
    ||||||||||  || ||||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| ||         ||||||||| ||||    
T  31525351 tcttttgttttagggtggtttttaaggggtttttgttcgagccgttgtttgtgtggcaaccgatttccccttgtttgttttttt--tccacccaagctta 31525448  T
Q  159 ttagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    |||||||| ||||||| ||||  |||||| |||||||||||||    
T  31525449 ttagtgcttcttgcacaggcttgttggttaataatattttgcc 31525491  T

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Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 320 - 402
Target Start/End: Original strand, 35643869 - 35643950
Alignment:
Q  320 gtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| | || |||||||||||||    
T  35643869 gtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgca-ttgtttaatcatt 35643950  T

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Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 394
Target Start/End: Complemental strand, 48322779 - 48322682
Alignment:
Q  297 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||| |||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| |||||||||||||||||| |||| || |||||    
T  48322779 aattaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgtt 48322682  T

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Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 10294985 - 10294886
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||| || ||| ||||||||||||||   |||||||| ||||||| ||||||||||||| || ||||||||||||    
T  10294985 ggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgca-ttgtttaatcat 10294887  T

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Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 36314298 - 36314390
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  36314298 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 36314390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 36314695 - 36314603
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| |||||||||||||||||| |||| || |||||    
T  36314695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgtt 36314603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 21186114 - 21186040
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    ||||||||||||| |||||||||| |||||||||||||| ||  |||||||||||||||||||||| ||||||||    
T  21186114 atgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattaccctt 21186040  T

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Target: chr3; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 376
Target Start/End: Complemental strand, 42855733 - 42855659
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||    
T  42855733 ggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaa 42855659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 53349391 - 53349465
Alignment:
Q  61 ttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatg 135  Q
    |||||||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||| || ||||||||||    
T  53349391 ttttgttttggggtggtttttaaggggtttttgtttgagccggtgtttgtgcggcaaccgattttcccttgtatg 53349465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 2796198 - 2796278
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  2796198 tccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 2796278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 10770493 - 10770582
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  10770493 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 10770582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 10770885 - 10770796
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||| || |||||| ||||||||||||||||||||||| |||  |||||| |||||||||||||||||| |||| || |||||    
T  10770885 ttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgtt 10770796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 55167035 - 55166895
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattctcttttgtt----------tagggttggtttttaaggggtat 90  Q
    |||||||| |||| | |||||||||||||||||||||| ||||||| |||| || | ||||||||||          ||||| ||||||||||||||| |    
T  55167035 tggtgttgtcgcacgagtatgcatgtggtttgtcatatgtatatgcctgcgacattactcttttgttccattttgtgtaggggtggtttttaaggggttt 55166936  T
Q  91 ttgttcgagccggtgtttgtgcggcaaccgacttccccttg 131  Q
    |||||||||||   ||||||||||||||||| |||||||||    
T  55166935 ttgttcgagccaaagtttgtgcggcaaccgatttccccttg 55166895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 201
Target Start/End: Complemental strand, 9358876 - 9358753
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgg 176  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||        |||||||||| ||||||||| || || ||||||    
T  9358876 ttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttccccttctatg-tttttttctccacccaagcttattagtacttctcgcacgg 9358778  T
Q  177 gctaattggttgataatattttgcc 201  Q
    |||  |||| | |||||||||||||    
T  9358777 gcttgttgggtaataatattttgcc 9358753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 13949121 - 13949071
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagt 352  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13949121 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 13949071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 43998148 - 43998244
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||| ||||||  || ||| ||||| | ||||||||||||||||||  ||||||||||||| |||||||||||||||| || |||||||||||||    
T  43998148 ttaatgacgtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttacccttgca-ttgtttaatcatt 43998244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 28934861 - 28934741
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgg 176  Q
    |||||||||||| |||||||||||||||||||||  ||||||||| |||||||||| |         |||||||| | |||||||||||| |||||||||    
T  28934861 tttttaaggggtttttgttcgagccggtgtttgt--ggcaaccgatttccccttgt-tttgttttttctccacccgagcttattagtgcttcttgcacgg 28934765  T
Q  177 gctaattggttgataatattttgc 200  Q
    |||  |||||| ||||||||||||    
T  28934764 gcttgttggttaataatattttgc 28934741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 352
Target Start/End: Original strand, 33506180 - 33506228
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagt 352  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33506180 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 33506228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 48322377 - 48322469
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||| | ||||||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  48322377 ggcttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 48322469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 43073175 - 43073050
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgca 173  Q
    ||||||||||||||| ||||||||||||||||||| |  ||||||||| ||||||||||||          ||||||||| |||||||||||  ||||||    
T  43073175 tggtttttaaggggtttttgttcgagccggtgttt-taaggcaaccgatttccccttgtat-tcttttttttccacccaagcttattagtgcatcttgca 43073078  T
Q  174 cgggctaattggttgataatattttgcc 201  Q
    ||||||  |||||| |||||||||||||    
T  43073077 cgggcttgttggttaataatattttgcc 43073050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 6956257 - 6956331
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||| ||||||||||  |||||||||||||||||  | ||||||||||||||||||| ||||||||    
T  6956257 atgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattaccctt 6956331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 9294367 - 9294287
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| ||||||||||||||||||||| || |||||||||||||    
T  9294367 tccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 9294287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 47820904 - 47820957
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 130  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  47820904 ttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttcccctt 47820957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 402
Target Start/End: Complemental strand, 10307765 - 10307702
Alignment:
Q  338 catttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  10307765 catttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 10307702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 200
Target Start/End: Original strand, 20701076 - 20701275
Alignment:
Q  2 ggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattctcttttg-tttagggttggtttttaaggggtatttgttcgagc 100  Q
    |||||||||||| |||||||| ||||||  ||||||| ||||||  ||| ||| | |||||||| ||| |||| | |||||||||||| |||||||||||    
T  20701076 ggtgttgacgcaggggtatgcgtgtggtccgtcatatgtatatgtctgcatcattactcttttgtttttgggtggttttttaaggggtttttgttcgagc 20701175  T
Q  101 cggtgtttgtgcggcaaccgacttccccttgtatg-nnnnnnnnctccacccaaacttattagtgctccttgcacgggctaattggttgataatattttg 199  Q
    | ||  ||||| ||||| ||| |||||||||| ||         || ||||| | |||||||||||| |||| |||||||  |||||| |||||||||||    
T  20701176 c-gtagttgtgtggcaatcgatttccccttgtttgtatttttttcttcacccgagcttattagtgcttcttgtacgggctcgttggttaataatattttg 20701274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 402
Target Start/End: Complemental strand, 9368720 - 9368630
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||| ||| ||||||||||||||| ||| |||||||||| |||  ||||||| |||||||| |||| |||| |||||| |||||||||||||    
T  9368720 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttaca-ttgtttaatcatt 9368630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 28956935 - 28957005
Alignment:
Q  62 tttgtttagggttggttttt--aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 130  Q
    ||||||||| | ||||||||  ||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  28956935 tttgtttagaggtggttttttaaaggggtttttgttcgagccggtgtttgtgtggcaaccgatttcccctt 28957005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 33154877 - 33154960
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||  |||||||| |||| |||||||||| |||||||||||||| |||  ||||||||||||||||| ||| ||| ||||    
T  33154877 ggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatcctt 33154960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 54466430 - 54466501
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| ||||||||||||| ||||    
T  54466430 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 54466501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 1079640 - 1079566
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    ||||||||  ||| |||||||||| |||||||||||||| |||  ||||||||||||||||||||| ||| ||||    
T  1079640 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagcctt 1079566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 8041616 - 8041694
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  8041616 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 8041694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 390
Target Start/End: Complemental strand, 33689785 - 33689719
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||||||||| ||| |||||||||| ||  ||||||||| ||||||||||||||||||||| ||||    
T  33689785 ttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcatt 33689719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 402
Target Start/End: Complemental strand, 4323607 - 4323531
Alignment:
Q  325 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||| |||  |||||||| |||||||||||| ||| |||| || |||||||||||||    
T  4323607 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgca-ttgtttaatcatt 4323531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 202
Target Start/End: Original strand, 10454282 - 10454413
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnct---ccacccaaacttattagtgctcctt 170  Q
    ||||||||||||||| |||||| |||||||  ||  || ||||||||| |||||||||||||         |   |||||| | ||||||||||||||||    
T  10454282 tggtttttaaggggtttttgtttgagccggctttcttgtggcaaccgatttccccttgtatgtattttttttttcccacccgagcttattagtgctcctt 10454381  T
Q  171 gcacgggctaattggttgataatattttgcca 202  Q
    |||||||||  |||||| ||||||||||||||    
T  10454382 gcacgggcttgttggttaataatattttgcca 10454413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 19741301 - 19741221
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||| |||||||||||||||  | |||||||||||||    
T  19741301 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgta-ttgtttaatcatt 19741221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 23458388 - 23458308
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||| | ||| |||||||||| |||  |||||||| ||||||| ||||||||||||| || |||||||||||||    
T  23458388 tccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgca-ttgtttaatcatt 23458308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 40788423 - 40788500
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    ||||||||||||||  |||||||||||| |||| |||||||||||||||  | |||||| |||| ||| |||||||||    
T  40788423 ttaatgatgtgtttcttccttgcaattaagcgttatttaaaaattagtccctctaatcgctaattctgacaatttacc 40788500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 42342810 - 42342890
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||| |||||||| ||| |||||||||| ||| ||||||| | || |||||||||||||||||| || |||||||||||||    
T  42342810 tccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgca-ttgtttaatcatt 42342890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 43607789 - 43607854
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||| |||| |||||||| |||||||||||||||| |||  |||||||||||||||| ||||    
T  43607789 atgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatccttgcaa 43607854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 4322592 - 4322690
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||||||||||||   || |||||||||||||| |||||||||| |||  |||||||| |||||||| ||| ||| |||| || ||||||||||||    
T  4322592 ggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtc-ctgtaatcgctaatcctgacaaattaaccttgca-ttgtttaatcat 4322689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 370
Target Start/End: Complemental strand, 3596486 - 3596432
Alignment:
Q  315 gttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcc 370  Q
    |||| |||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  3596486 gtttcgtccttgcaattaggcgtgatttaaaaattagtc-ttgtaatcgttaatcc 3596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 54466813 - 54466742
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  54466813 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattggtaatcctggcatttta 54466742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 8431546 - 8431489
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgt 132  Q
    ||||||||||||||| ||||||||||||||||||| ||  |||||||| ||||||||||    
T  8431546 tggtttttaaggggtttttgttcgagccggtgttt-tgttgcaaccgatttccccttgt 8431489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 40506197 - 40506127
Alignment:
Q  321 tccttgcaatta-ggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||| || ||||||||||| || ||   ||||||||||||||||| |||||||||||||||||    
T  40506197 tccttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacatt 40506127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 40758166 - 40758227
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||| ||||||| |||||||||||    
T  40758166 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcct-gcaatttaccc 40758227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 46474837 - 46474914
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||| |||||||||| |||  |||||||| ||||| |||||||||||| || || |||||||||||||    
T  46474837 ttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgca-ttgtttaatcatt 46474914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 47856396 - 47856466
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    |||||||| |||| |||||||| ||||| |||||||||| |||  ||||||||||||||||| ||| ||||    
T  47856396 atgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattac 47856466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 47921466 - 47921544
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| ||||||| ||||| ||||    
T  47921466 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcttggcatttta 47921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 23276402 - 23276325
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttaca 388  Q
    ||||||||  ||| |||||||||| |||||||||||||| |||  |||||||| |||||| ||||| |||||| ||||    
T  23276402 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctaca 23276325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 40033865 - 40033785
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| ||   | |||| | ||||||||||||||||||||| || |||||||||||||    
T  40033865 tccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgca-ttgtttaatcatt 40033785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 51994295 - 51994215
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||  || |||||||||| |||  |||||||| |||| |||||||||||||| | || |||||||||||||    
T  51994295 tccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgca-ttgtttaatcatt 51994215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52075975 - 52076039
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattctcttttg 65  Q
    |||||||||||||||||||||||||||  ||| ||  | ||||||| ||||||||| ||||||||    
T  52075975 tggtgttgacgcaagggtatgcatgtgtattgccaattgtatatgcatgcgtcaatactcttttg 52076039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 8042006 - 8041935
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| |||||||| ||| |||  |||||| | ||||||||||| ||||    
T  8042006 tgatgtgtttagcccttgcaattaggcggcatttaaatattcgtccctgtaattgctaatcctggcatttta 8041935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Complemental strand, 40758519 - 40758464
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||| ||||||| ||||    
T  40758519 tccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaa 40758464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 1078546 - 1078604
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatc 369  Q
    |||| ||| |||| |||||||||| |||||||||||||| |||  ||||||||||||||    
T  1078546 atgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatc 1078604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 376
Target Start/End: Original strand, 25107213 - 25107287
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||  ||||||||  ||| |||||||||| |||||||||||||| |||  | |||||| ||||||||||||    
T  25107213 ggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaa 25107287  T

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Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 26479079 - 26479145
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 377  Q
    |||||||| |||| ||||| |||| || ||||||||| | ||| |||||||||||||||||| ||||    
T  26479079 atgtgtttagtccctgcaaataggggtgatttaaaaaatggtccatgtaatcgttaatcctgacaat 26479145  T

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Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 402
Target Start/End: Original strand, 43384321 - 43384382
Alignment:
Q  340 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||| |||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  43384321 tttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 43384382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 53756766 - 53756843
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||| ||||||||||  |  ||||||||||||||| | | ||||||||||| || |||||||||||||    
T  53756766 ttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgca-ttgtttaatcatt 53756843  T

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Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 382
Target Start/End: Complemental strand, 55052638 - 55052596
Alignment:
Q  340 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||    
T  55052638 tttaaaaattggtccatgtaatcgttaatcatggcaatttacc 55052596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 34142627 - 34142575
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctgg 373  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||| ||||    
T  34142627 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatactgg 34142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 35712063 - 35712119
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 377  Q
    ||||||||||||||  ||||||||||||| ||| ||||| ||| ||||||| |||||    
T  35712063 tccttgcaattagggatcatttaaaaattggtccatgtattcgctaatccttgcaat 35712119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 44656286 - 44656226
Alignment:
Q  144 ctccacccaaacttattagtgctccttgcacgggctaattggttgataatattttgccaat 204  Q
    |||||||| | |||||| ||||  ||||||||||||  |||||| ||||||||||||||||    
T  44656286 ctccacccgagcttatttgtgcatcttgcacgggcttgttggttaataatattttgccaat 44656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 11566 - 11467
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||    
T  11566 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgca-ttgtttaatcat 11468  T

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Target: scaffold0328; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 11143 - 11239
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||||| ||||||||||||  ||| |||| ||||| ||||||||||||||| || |||||||||||||    
T  11143 ttaatgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatcttggcaatttacccttgca-ttgtttaatcatt 11239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 40714444 - 40714543
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||    
T  40714444 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgca-ttgtttaatcat 40714542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 49955773 - 49955674
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||    
T  49955773 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgca-ttgtttaatcat 49955675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 40714869 - 40714770
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || || ||||||||||||    
T  40714869 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgca-ttgtttaatcat 40714771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 301 - 402
Target Start/End: Complemental strand, 17189278 - 17189178
Alignment:
Q  301 gggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatca 400  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||||    
T  17189278 gggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatca 17189180  T
Q  401 tt 402  Q
    ||    
T  17189179 tt 17189178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 17188954 - 17189042
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||    
T  17188954 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcatt 17189042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 20760931 - 20760832
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||    
T  20760931 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 20760833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 31058483 - 31058384
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||||    
T  31058483 ggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgca-ttgtttaatcat 31058385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 49955347 - 49955446
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||    
T  49955347 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 49955445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 296 - 402
Target Start/End: Complemental strand, 28325235 - 28325131
Alignment:
Q  296 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgttt 395  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| || ||||||    
T  28325235 aaattaggcttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaattagtc-atgtaatcgttaattatggcaatttacccttgca-ttgttt 28325138  T
Q  396 aatcatt 402  Q
    |||||||    
T  28325137 aatcatt 28325131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 301 - 402
Target Start/End: Original strand, 30326495 - 30326595
Alignment:
Q  301 gggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatca 400  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||| |||| ||||||||||| || |||||||||||    
T  30326495 gggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgca-ttgtttaatca 30326593  T
Q  401 tt 402  Q
    ||    
T  30326594 tt 30326595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 12906085 - 12905986
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||| | | ||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||||||||    
T  12906085 ggcttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 12905987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 31050950 - 31051049
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||||||| || || ||||||||||||    
T  31050950 ggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgca-ttgtttaatcat 31051048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 37929418 - 37929506
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||| |||||||| |||||||||||||||||    
T  37929418 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttacccttacatt 37929506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 45749842 - 45749941
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| ||| || ||||||||||||    
T  45749842 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgca-ttgtttaatcat 45749940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 45750268 - 45750169
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||| ||||||||| ||| || ||||||||||||    
T  45750268 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgca-ttgtttaatcat 45750170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 26990589 - 26990729
Alignment:
Q  59 tcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaactta 158  Q
    |||||||||||||| ||||||||||||| | |||||| ||||||||| ||||||||||| ||| || ||||||||||         ||||||||| ||||    
T  26990589 tcttttgtttaggggtggtttttaagggatttttgtttgagccggtgcttgtgcggcaatcgattttcccttgtatgttttttt--tccacccaagctta 26990686  T
Q  159 ttagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    |||||||| |||||||||||| ||||||| |||||||||||||    
T  26990687 ttagtgcttcttgcacgggcttattggttaataatattttgcc 26990729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 35041037 - 35040941
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||||||| ||||||||| |||||||| |||||||||||| || |||||||||||||    
T  35041037 ttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 35040941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 8898517 - 8898616
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||| |||  | ||||||||||||    
T  8898517 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgta-ttgtttaatcat 8898615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 8898943 - 8898844
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||||  |||| ||| |||||||||||| || ||||||||||||    
T  8898943 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgca-ttgtttaatcat 8898845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 47028919 - 47028994
Alignment:
Q  59 tcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 134  Q
    |||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  47028919 tcttttgtttaggggtagtttttaaggggtttttgttcgagccggtgtttttgcggcaaccgatttccccttgtat 47028994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 12172942 - 12173082
Alignment:
Q  59 tcttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaactta 158  Q
    ||||||||||  || ||||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||||| ||         ||||||||| ||||    
T  12172942 tcttttgttttagggtggtttttaaggggtttttgttcgagctgatgtttgtgtggcaaccgatttccccttgtttgttttttt--tccacccaagctta 12173039  T
Q  159 ttagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    |||||||| ||||||||||||  |||||| |||||||||||||    
T  12173040 ttagtgcttcttgcacgggcttgttggttaataatattttgcc 12173082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 28011765 - 28011673
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  28011765 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 28011673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 44523562 - 44523465
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| |   | |||||| ||||| ||||||||||||||| || |||||||||||||    
T  44523562 cttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaattaatatctataatcgctaatcatggcaatttacccttgca-ttgtttaatcatt 44523465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 25885419 - 25885358
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcg 363  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  25885419 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcg 25885358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 24905167 - 24905259
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||| |||||||| |||| || |||||    
T  24905167 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgtt 24905259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 28324805 - 28324892
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||||||  |||||||||||||||||| ||| |||||||||  ||||||||| |||||||| |||||||||||| ||||    
T  28324805 ggcttaatgatgtgtttcctccttgcaattaggcgtcgttt-aaaattagttcatgtaatcgctaatcctgacaatttacccttgcatt 28324892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 32558533 - 32558450
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||   | |||||| ||||||||  |||||||||||    
T  32558533 ggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttaccctt 32558450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 6367581 - 6367661
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  6367581 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 6367661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 402
Target Start/End: Original strand, 14878979 - 14879070
Alignment:
Q  310 gatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||| |||| |||||||||||||| ||| |||||||||| ||  ||||||||| ||||| ||||||||||||||| || |||||||||||||    
T  14878979 gatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgca-ttgtttaatcatt 14879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 380
Target Start/End: Complemental strand, 52134471 - 52134387
Alignment:
Q  296 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||| ||||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| ||||||||||||| ||||    
T  52134471 aaatagggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 52134387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 26024444 - 26024522
Alignment:
Q  323 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  26024444 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 26024522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 7371595 - 7371529
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaat 368  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||||||||  |||||||| ||||    
T  7371595 ggcttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtctctgtaatcgctaat 7371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 25647903 - 25647965
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||||||||||||||||||    
T  25647903 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttaccc 25647965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 23209736 - 23209667
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||    
T  23209736 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcatt 23209667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 24009950 - 24009870
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||  || |||||||||| |||| ||||||||  |||||||||||||||||||| || |||||||||||||    
T  24009950 tccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgca-ttgtttaatcatt 24009870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 34464468 - 34464548
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||| ||||| ||||||||||||||| ||  ||||||||||||    
T  34464468 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgca-atgtttaatcatt 34464548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 43268732 - 43268679
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 130  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  43268732 ttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttcccctt 43268679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 35038458 - 35038534
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    ||||| |||||||| ||||||||||||| | ||||||||||||||  || ||||||||||||||||| |||| ||||    
T  35038458 ttaataatgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattac 35038534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26384877 - 26384940
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattctctttt 64  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||| ||||||| | |||||||    
T  26384877 tggtgttgacgtaagggtattcatgtggtttgtcatatgtatatgcctgcgtcattactctttt 26384940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 41098754 - 41098832
Alignment:
Q  323 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||| ||| |||||||||| |||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  41098754 cttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 41098832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 33442594 - 33442672
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  33442594 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 33442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 402
Target Start/End: Original strand, 46163056 - 46163129
Alignment:
Q  328 aattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||| ||| |||||||||| ||| ||||||||| |||||||| |||||||||||| || |||||||||||||    
T  46163056 aattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 46163129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 7371293 - 7371378
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||   |||||||| | || |||| |||||| |||| ||||    
T  7371293 ttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaatttatccttgcatt 7371378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 7820973 - 7821053
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||||| ||||||||  |||||||| |||||||  |||||||||||| || |||||||||||||    
T  7820973 tccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgca-ttgtttaatcatt 7821053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 8463097 - 8462976
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgcacgg 176  Q
    |||||||||||| |||||||||||||  |||| || ||||||||| || ||||||||||        |||||||| | || ||||||||| ||||||||     
T  8463097 tttttaaggggtttttgttcgagccgacgtttttgtggcaaccgattttcccttgtatgtattttttctccacccgagctaattagtgcttcttgcacga 8462998  T
Q  177 gctaattggttgataatatttt 198  Q
    |||  |||||| ||||||||||    
T  8462997 gcttgttggttaataatatttt 8462976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 13914476 - 13914396
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||  ||  |||||||||| ||| ||||||||| |||||||||||||||||||||  | |||||||||||||    
T  13914476 tccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgta-ttgtttaatcatt 13914396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 17662259 - 17662179
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| || ||| |||||||||| ||   | |||||||||||||||||||||||||||| || |||||||||||||    
T  17662259 tccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgca-ttgtttaatcatt 17662179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 19515838 - 19515907
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||| |||| ||||||||||| ||||    
T  19515838 tccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcatt 19515907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 32132313 - 32132390
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttaca 388  Q
    |||||||| |||| | |||||||  |||||||||||||| ||| ||||||||||||||||| |||| |||| ||||||    
T  32132313 atgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttaca 32132390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 34464858 - 34464778
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||  |||||||||| ||| ||||||||| ||||| ||||||||||||||| ||  ||||||||||||    
T  34464858 tccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgca-atgtttaatcatt 34464778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 36694657 - 36694577
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||  |||||||||| |||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  36694657 tccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 36694577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 36710758 - 36710678
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||  |||||||||| |||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  36710758 tccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 36710678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 37578601 - 37578532
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||||||||| || ||| |||||||||| ||   |||||||| ||||||||||||||||||||||||||    
T  37578601 tccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacatt 37578532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 10304274 - 10304206
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattt 379  Q
    |||||||| |||| ||||| |||| |||||||||||| | ||||||||| |||||||| ||||||||||    
T  10304274 atgtgtttagtccctgcaaataggggtcatttaaaaaatggtcaatgtattcgttaattctggcaattt 10304206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 19018057 - 19017969
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||  |||| |||| ||||||||||||   ||| |||||||||| ||| ||||| ||| ||||||||||||||||||||| ||||    
T  19018057 ggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcatt 19017969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 380
Target Start/End: Complemental strand, 33442989 - 33442913
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  33442989 cttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33442913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 42533043 - 42533099
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 377  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||    
T  42533043 tccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatccttgcaat 42533099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 1841481 - 1841558
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||| | ||| |||||||||| |||   ||||||| |||||||| ||||||||||||||| |||||||||||||    
T  1841481 ttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttaca-ttgtttaatcatt 1841558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 402
Target Start/End: Complemental strand, 40210776 - 40210699
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| | | |||||||||| |||  |||||||| |||| |||||||||||||||| || |||||||||||||    
T  40210776 ttgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgca-ttgtttaatcatt 40210699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 42442151 - 42442105
Alignment:
Q  62 tttgtttagggttggtttttaaggggtatttgttcgagccggtgttt 108  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  42442151 tttgtttaggggtggtttttaaggggtttttgttcgagtcggtgttt 42442105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 52134068 - 52134146
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | |||||||||||||||  ||||||||||| |||  |||||| | ||||||||||| ||||    
T  52134068 ggcttattgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaattgctaatcctggcatttta 52134146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 201
Target Start/End: Original strand, 19472791 - 19472928
Alignment:
Q  65 gtttagggttggtttttaagggg-tatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagt 163  Q
    ||||| || |||||||||| ||| | |||||||||||||| ||||||  |||||| || |||||||| | ||        |||||||| | |||||||||    
T  19472791 gtttatgggtggtttttaaagggatttttgttcgagccggagtttgtatggcaactgatttccccttctttgtattttttctccacccgagcttattagt 19472890  T
Q  164 gctccttgcacgggctaattggttgataatattttgcc 201  Q
    ||  ||||||||||||  |||||| |||||||||||||    
T  19472891 gcgtcttgcacgggcttgttggttaataatattttgcc 19472928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 35152362 - 35152442
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||  ||| |||||||||| |||  | |||||| |||| ||| ||||||||||||||| |||||||||||||    
T  35152362 tccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttaca-ttgtttaatcatt 35152442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 40772526 - 40772606
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||| | ||| |||||||||| |||  |||||||| |||||||| |||||||| ||| || |||||||||||||    
T  40772526 tccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgca-ttgtttaatcatt 40772606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 42248492 - 42248572
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||  ||| |||||||||| |||  |||| ||| ||||| ||||||||||||||| || |||||||||||||    
T  42248492 tccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgca-ttgtttaatcatt 42248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 5734010 - 5734108
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||  |||| ||| ||||||||||||||| ||| |||||||||| ||| ||||||||| ||||||| |||| |||  ||| || ||||||||||||    
T  5734010 ggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtc-atgtaatcgctaatccttgcaaattagtcttgca-ttgtttaatcat 5734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 25884701 - 25884745
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaa 346  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||    
T  25884701 ggcttaatgatgtgtttcgtcattgcaattagacgtcatttaaaa 25884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 31197088 - 31197148
Alignment:
Q  325 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||| |||||||||||||| |||  |||| ||||||||||||| || ||||||||    
T  31197088 tgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattaccctt 31197148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 31833898 - 31833957
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 134  Q
    ||||||||||||||| |||||||||||||||| || || ||||||||| || |||||||||    
T  31833898 tggtttttaaggggtttttgttcgagccggtg-ttatgtggcaaccgattttcccttgtat 31833957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 372
Target Start/End: Original strand, 4716475 - 4716538
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctg 372  Q
    |||||||||| | ||||||||||||| | |||||||||||| ||| ||||||| | ||||||||    
T  4716475 tgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccatgtaattgctaatcctg 4716538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 13914087 - 13914142
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||| ||||||| ||||    
T  13914087 tccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaa 13914142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 31514325 - 31514396
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| |||||||||||| ||   |||||| |||||| |||||| ||||    
T  31514325 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaattctggcatttta 31514396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 31514707 - 31514636
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | |||| |||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  31514707 tgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 31514636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 35473650 - 35473705
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||    
T  35473650 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaa 35473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 44522147 - 44522230
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||  |||||||| |||| ||||||||||  ||||||||||||| | |  |||||||||||||||| |||| ||| ||||    
T  44522147 ggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaattatcctt 44522230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 402
Target Start/End: Original strand, 1103515 - 1103560
Alignment:
Q  356 tgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||    
T  1103515 tgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 1103560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 4960562 - 4960639
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||| ||||||||||  ||  |||| ||| ||||||| ||||||||||||| || |||||||||||||    
T  4960562 ttgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgca-ttgtttaatcatt 4960639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 10303932 - 10304006
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||  ||||| |||| |||||||||||| |  || ||||| ||||||||||||||||||| |||||    
T  10303932 atgtgtttggtctctgcaaataggagtcatttaaaaaatgatctatgtattcgttaatcctggcaatttgccctt 10304006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38548593 - 38548659
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattctcttttgtt 67  Q
    |||||||| |||| | ||||||| |||||||||||||| ||||||| |||| || | ||||||||||    
T  38548593 tggtgttgtcgcacgagtatgcacgtggtttgtcatatgtatatgcctgcgacattactcttttgtt 38548659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 40435364 - 40435414
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcct 371  Q
    |||||||||||||| ||| |||||||||| |||| |||| |||||||||||    
T  40435364 tccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatcct 40435414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 47999501 - 47999439
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    |||||| ||||||| ||| |||||||||| |||  |||||||| ||||| |||||||||||||    
T  47999501 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttaccc 47999439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 28447802 - 28447847
Alignment:
Q  156 ttattagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    ||||||||||| ||||||||||||  |||||| |||||||||||||    
T  28447802 ttattagtgcttcttgcacgggcttgttggttaataatattttgcc 28447847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30465231 - 30465186
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgc 46  Q
    ||||| |||||||||||||||| ||||||||||||||  |||||||    
T  30465231 tggtggtgacgcaagggtatgcttgtggtttgtcataggtatatgc 30465186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 32917279 - 32917359
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||  || |||||||||| |||  |||||||| |||||||| || ||||| ||| || |||||||||||||    
T  32917279 tccttgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgca-ttgtttaatcatt 32917359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 41956016 - 41955959
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 134  Q
    |||||||||| | ||||||||||||||||||  |  ||||||||| ||||||||||||    
T  41956016 tttttaagggatttttgttcgagccggtgttattatggcaaccgatttccccttgtat 41955959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 9443581 - 9443645
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggca 375  Q
    |||||||| |||||||||| |||| |||||||||||| | |||  |||| || ||||||||||||    
T  9443581 atgtgtttagtccttgcaaataggggtcatttaaaaaatggtctctgtattccttaatcctggca 9443645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 376
Target Start/End: Complemental strand, 26024822 - 26024746
Alignment:
Q  300 tgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||  |||| |||  |||||||||||||| ||| |||||||||| |||  |||||||| ||||||| ||||    
T  26024822 tgggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaa 26024746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 34849030 - 34849094
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| |||| ||||||||    
T  34849030 tccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattaccctt 34849094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 34850474 - 34850410
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||||| ||| |||||||||| |||  |||| ||| ||||||| |||| ||||||||    
T  34850474 tccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattaccctt 34850410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 377
Target Start/End: Complemental strand, 35152739 - 35152683
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 377  Q
    |||||||||||||| ||| ||||||||||||||  |||| ||| ||||||| |||||    
T  35152739 tccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatccttgcaat 35152683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 46757301 - 46757365
Alignment:
Q  66 tttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 130  Q
    ||||||| |||||||||| |||| ||||||||||| ||||||  || ||||| ||| ||||||||    
T  46757301 tttaggggtggtttttaaagggtttttgttcgagctggtgttattgtggcaatcgatttcccctt 46757365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 12662 - 12566
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || |||||||||||||    
T  12662 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgca-ttgtttaatcatt 12566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 12249 - 12339
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| || |||||| || | || |||||||||||      ||||| ||||||||||||||||||||| || |||||||||||||    
T  12249 ttaatgatgtgtttcgtcgttacaattaagcattatataaaaattagt------aatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 12339  T

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Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 15229931 - 15230030
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||  | ||||||||||||    
T  15229931 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgga-ttgtttaatcat 15230029  T

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Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 234166 - 234067
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||| || ||||||||||||    
T  234166 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgca-ttgtttaatcat 234068  T

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Target: chr8; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 710577 - 710478
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||| || ||||||||||||    
T  710577 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgca-ttgtttaatcat 710479  T

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Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 747789 - 747690
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||| || ||||||||||||    
T  747789 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgca-ttgtttaatcat 747691  T

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Target: chr8; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 871684 - 871585
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||| || ||||||||||||    
T  871684 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgca-ttgtttaatcat 871586  T

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Target: chr8; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 7983428 - 7983527
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||    
T  7983428 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 7983526  T

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Target: chr8; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 44664508 - 44664607
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| || ||||||||||||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgca-ttgtttaatcat 44664606  T

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Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 44664932 - 44664835
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 44664835  T

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Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 5200623 - 5200486
Alignment:
Q  63 ttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattag 162  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||        |||||||||||||||||||    
T  5200623 ttgtttaggggtgatttttaaggggtttttgttcgagccggtgtttgtgcggcaaccgattttcccttgtatg-tttttttctccacccaaacttattag 5200525  T
Q  163 tgctccttgcacgggctaattggttgataatattttgcc 201  Q
    || | ||||||||| ||  |||||| |||||||||||||    
T  5200524 tgtttcttgcacggacttgttggttaataatattttgcc 5200486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 10445758 - 10445662
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  10445758 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 10445662  T

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Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 25124566 - 25124662
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||    
T  25124566 ttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 25124662  T

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Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 15230357 - 15230258
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||| || |||||||||||| || ||||||||||||    
T  15230357 ggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgca-ttgtttaatcat 15230259  T

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Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 35634525 - 35634426
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||| |||||||| |||||||||||| || ||||||||||||    
T  35634525 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 35634427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 299 - 402
Target Start/End: Complemental strand, 25124992 - 25124890
Alignment:
Q  299 ttgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaat 398  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||  |||||||| |||| |||||||||||||||| || |||||||||    
T  25124992 ttgggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgca-ttgtttaat 25124894  T
Q  399 catt 402  Q
    ||||    
T  25124893 catt 25124890  T

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Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 8998113 - 8998016
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||| || |||||||||||| || |||||||||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgca-ttgtttaatcatt 8998016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 6471693 - 6471789
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||  | |||||| ||||||||||||||||||||| || |||||||||||||    
T  6471693 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 6471789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 37542227 - 37542323
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||| || |||||||||||||    
T  37542227 ttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 37542323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 8997859 - 8997944
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  || ||||| |||||||| |||||||||||| ||||    
T  8997859 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaatttacccttgcatt 8997944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 23505052 - 23505144
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||| | ||||| ||||||||||||||| || |||||    
T  23505052 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgtt 23505144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 305 - 385
Target Start/End: Complemental strand, 38003829 - 38003749
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||||  |||||||| |||||||||||||||||||||    
T  38003829 ttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaattagtctctgtaatcgctaatcctggcaatttaccctt 38003749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 36325628 - 36325539
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| |||||||||||||||||| |||| || |||||    
T  36325628 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttgcaattgtt 36325539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 42945537 - 42945441
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||   |||||||| |||||||| |||||||| ||| || |||||||||||||    
T  42945537 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgca-ttgtttaatcatt 42945441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 11674695 - 11674787
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| |||||||||||||||||| |||| || |||||    
T  11674695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgtt 11674787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 11675091 - 11674999
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  11675091 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 11674999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 201
Target Start/End: Complemental strand, 24200762 - 24200626
Alignment:
Q  62 tttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttatta 161  Q
    ||||||||||| ||||||||||| | | ||||||||||||||||||| |||||||||||| |||||||||||||         ||||||||| |||||||    
T  24200762 tttgtttaggggtggtttttaagtgtt-tttgttcgagccggtgtttttgcggcaaccgatttccccttgtatgttttttt--tccacccaagcttatta 24200666  T
Q  162 gtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    ||||| ||||||||| ||  ||| || |||||||||||||    
T  24200665 gtgcttcttgcacggacttgttgattaataatattttgcc 24200626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 384
Target Start/End: Complemental strand, 41353999 - 41353917
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccct 384  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||||||  |||||||  |||||||| |||||||||||    
T  41353999 ggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttaccct 41353917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 40318373 - 40318293
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||    
T  40318373 tccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 40318293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 41353577 - 41353673
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||||   |||||||| |||||||  |||||||||||| || |||||||||||||    
T  41353577 ttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgca-ttgtttaatcatt 41353673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 23507853 - 23507761
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||||||||||||||||||  |||  |||||| | ||||||| ||||||||||||| || |||||    
T  23507853 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgtt 23507761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 40930972 - 40930833
Alignment:
Q  60 cttttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttat 159  Q
    ||||||||||||| |||||||||||| || ||||||||||||| |||||||  | ||||||| |||||||||| ||         ||||||| | |||||    
T  40930972 cttttgtttaggggtggtttttaaggagtttttgttcgagccgttgtttgt--gacaaccgatttccccttgtttgtatttttt-tccacccgagcttat 40930876  T
Q  160 tagtgctccttgcacgggctaattggttgataatattttgcca 202  Q
    ||||||| ||||||||||||  |||||| ||||||||||||||    
T  40930875 tagtgcttcttgcacgggcttgttggttaataatattttgcca 40930833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 10749927 - 10749853
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||||||||||||||  ||||||||||||| ||| |||||||||||||||||| ||| ||||||||    
T  10749927 atgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattaccctt 10749853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 21432695 - 21432792
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||  |||||||  ||||  || |||||||||||| || |||||||||||||    
T  21432695 cttaatgatgtgtttcgtccttgcaattagacgtcatataaaaattagtctctgtaatcactaattttgacaatttacccttgca-ttgtttaatcatt 21432792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 2535969 - 2535892
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttaca 388  Q
    |||| ||| |||| |||||||||| |||||||||||||| |||  ||||||||||||||||||||| |||||||||||    
T  2535969 atgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttaca 2535892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 8316997 - 8316917
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  8316997 tccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 8316917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 16388935 - 16388855
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||| ||  ||||||| | ||||||||||||||||||||| || |||||||||||||    
T  16388935 tccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgca-ttgtttaatcatt 16388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 23663923 - 23663843
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  23663923 tccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 23663843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 36325234 - 36325326
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||| |||||||| ||| |||||||||| |||  |||||| |||||||||||||||||| |||| || |||||    
T  36325234 ggcttaatgatgtgattagtccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgtt 36325326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 6472441 - 6472395
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaat 348  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  6472441 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 4995065 - 4994986
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||| |||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  4995065 tccttgcaattaggggtcatttaaaaattggtc-ctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 4994986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 12273262 - 12273182
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  ||||||||||||||| | |||||||||||| || |||||||||||||    
T  12273262 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgca-ttgtttaatcatt 12273182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 23698653 - 23698573
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  23698653 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 23698573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 39071695 - 39071775
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  39071695 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 39071775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 10124847 - 10124922
Alignment:
Q  59 tcttttgtttagggttggtttt-taaggggtatttgttcgagccggtg-tttgtgcggcaaccgacttccccttgt 132  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| |||||  ||||||||| ||||||||||    
T  10124847 tcttttgtttaggggtggttttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttccccttgt 10124922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 2266492 - 2266570
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  2266492 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcatttta 2266570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 2266889 - 2266811
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  2266889 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 2266811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 372
Target Start/End: Complemental strand, 27500492 - 27500434
Alignment:
Q  314 tgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctg 372  Q
    ||||| ||||||||||||| | |||||||||||||| ||| ||||||||||||||||||    
T  27500492 tgtttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcctg 27500434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 38845696 - 38845618
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  38845696 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38845618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 40775650 - 40775728
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| ||   |||||| ||||||||||||| ||||    
T  40775650 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaatcctggcatttta 40775728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 13186079 - 13186159
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||  || |||||||||| ||  ||||||||| |||||||| |||||||||||| || |||||||||||||    
T  13186079 tccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 13186159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 22915767 - 22915687
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||| ||||  || |||||||||| ||| ||||||||| ||||| ||||||||||||||| || |||||||||||||    
T  22915767 tccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgca-ttgtttaatcatt 22915687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 36928495 - 36928575
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||| |||||| | ||| |||||||||| ||| ||||||||| |||||||| |||||||||||| || |||||||||||||    
T  36928495 tcctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 36928575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 37542648 - 37542552
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||| ||||||||  ||||| ||||||||||||||||||||||| ||   ||| ||||||||| |||  ||||||||||| || |||||||||||||    
T  37542648 ttaataatgtgtttcatccttacaattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgca-ttgtttaatcatt 37542552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 27500092 - 27500168
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    |||||||| ||||| |||||||||||||  ||||||||||||||||||| ||| ||||| |||| ||| ||| ||||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaattagtccatgcaatcgctaattctgacaaattac 27500168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 3041463 - 3041534
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||| ||| |||||||||||| ||| ||||||| | ||||||||||| ||||    
T  3041463 tgatgtgtttagcccttgcaattaagcggcatttaaaaattcgtccatgtaattgctaatcctggcatttta 3041534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 8746324 - 8746407
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||  ||||||||  ||| |||||||||| |||||||||||||  |||| |||||||||||||| || ||| ||||||||    
T  8746324 ggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattaccctt 8746407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 44406864 - 44406935
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  44406864 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 44406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 35449986 - 35449928
Alignment:
Q  322 ccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    ||||||||||||||| |||||||||||| ||| ||||||| | ||||||||||| ||||    
T  35449986 ccttgcaattaggcggcatttaaaaattcgtccatgtaattgctaatcctggcatttta 35449928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 38086560 - 38086419
Alignment:
Q  62 tttgtttagggttggttttt--aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnn-ctccacccaaactta 158  Q
    ||||||||||| ||||||||  ||||||| |||||||||||| | ||||||  ||||||||| || ||||| | ||         |||||||| | ||||    
T  38086560 tttgtttaggggtggttttttaaaggggtttttgttcgagccagagtttgtatggcaaccgattttcccttctttgtatttttttctccacccgagctta 38086461  T
Q  159 ttagtgctccttgcacgggctaattggttgataatattttgc 200  Q
    |||||||  |||||||||||| ||||||| ||||||||||||    
T  38086460 ttagtgcgtcttgcacgggcttattggttaataatattttgc 38086419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 30836265 - 30836212
Alignment:
Q  77 tttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 130  Q
    |||| ||||||| ||||||||||||||| |||||||||||| ||| ||||||||    
T  30836265 ttttaaaggggtttttgttcgagccggtatttgtgcggcaatcgatttcccctt 30836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 31608922 - 31608853
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||| | ||| |||||||||| ||| ||||| ||| ||||||| ||||||||||||| ||||    
T  31608922 tccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcatt 31608853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 38955722 - 38955802
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||  || |||||||||| |||| |||||||| ||||||||| ||||||||| | || |||||||||||||    
T  38955722 tccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgca-ttgtttaatcatt 38955802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 197
Target Start/End: Complemental strand, 25829408 - 25829272
Alignment:
Q  62 tttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatg-nnnnnnnnctccacccaaacttatt 160  Q
    |||||||| || ||||||||||||||| ||| ||| ||||||||||| |  || |||||| |||||||||| ||          ||||||| | ||||||    
T  25829408 tttgtttatgggtggtttttaaggggtttttattcaagccggtgtttatagggaaaccgatttccccttgtttgtatttttttttccacccgagcttatt 25829309  T
Q  161 agtgctccttgcacgggctaattggttgataatattt 197  Q
    |||||| ||||||||||||  |||||| |||||||||    
T  25829308 agtgcttcttgcacgggcttgttggttaataatattt 25829272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 8316672 - 8316727
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||||||||||| ||||    
T  8316672 tccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaa 8316727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 38845306 - 38845377
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  38845306 tgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 38845377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 39474579 - 39474645
Alignment:
Q  335 cgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||||| |   |||||||| ||||| ||||||||||||||| || |||||||||||||    
T  39474579 cgtcatttaaaaattaattcttgtaatcgctaatcttggcaatttacccttgca-ttgtttaatcatt 39474645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 349
Target Start/End: Complemental strand, 44407254 - 44407207
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaatt 349  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||    
T  44407254 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatt 44407207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 3041853 - 3041775
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| |  |||||||||||||| |||||||||| | |||  |||||| | ||||||||||| ||||    
T  3041853 ggcttattgatgtgtttagctcttgcaattaggcggcatttaaaaactcgtccctgtaattgctaatcctggcatttta 3041775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 402
Target Start/End: Complemental strand, 6472078 - 6472017
Alignment:
Q  340 tttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||  |||||||||  ||||||| |||||||||||| || |||||||||||||    
T  6472078 tttaaaaattagttcatgtaatcgccaatcctgacaatttacccttgca-ttgtttaatcatt 6472017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 372
Target Start/End: Complemental strand, 40776047 - 40775977
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctg 372  Q
    |||||| ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | ||||||||    
T  40776047 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 40775977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 4406069 - 4405989
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||| ||  |||||||||| ||| ||||| | ||||||||| ||||||||||||| ||  ||||||||||||    
T  4406069 tccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgca-atgtttaatcatt 4405989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 21433076 - 21433020
Alignment:
Q  345 aaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||| ||||||||||||||  || |||||||||||| || |||||||||||||    
T  21433076 aaattagtccatgtaatcgttaattttgacaatttacccttgca-ttgtttaatcatt 21433020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 22839325 - 22839382
Alignment:
Q  144 ctccacccaaacttattagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    ||||| || |||||||||||||  ||||||||||||  |||||| |||||||||||||    
T  22839325 ctccatccgaacttattagtgcgtcttgcacgggcttgttggttaataatattttgcc 22839382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 376
Target Start/End: Original strand, 34060482 - 34060563
Alignment:
Q  295 aaaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||| |||||||  |||| |||  ||||||||||||  |||| |||||||||| ||| ||||||||| ||||||| ||||    
T  34060482 aaaattaggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaa 34060563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40931045 - 40930992
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtca 54  Q
    ||||||||||||| || |||||||| |||| ||||||| ||||||| |||||||    
T  40931045 tggtgttgacgcagggctatgcatgcggttcgtcatatgtatatgcctgcgtca 40930992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 25829483 - 25829419
Alignment:
Q  2 ggtgttgacgcaagggtatgcatgtggtt-tgtcatatctatatgcttgcgtcaattctcttttg 65  Q
    |||||||| ||| |||||||| ||||||| |||||||  ||||||||||||||| | ||||||||    
T  25829483 ggtgttgaagcaggggtatgcttgtggttgtgtcataagtatatgcttgcgtcattactcttttg 25829419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 30459390 - 30459450
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    ||||| |||||||||||| |||||||||||||| ||||| ||  ||||||| |||| ||||    
T  30459390 tccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaattac 30459450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 17544474 - 17544375
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| || ||||||||||||    
T  17544474 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgca-ttgtttaatcat 17544376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 8875449 - 8875548
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||| || ||||||||||||    
T  8875449 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgca-ttgtttaatcat 8875547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 33871339 - 33871438
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||| |||| |||||||||||||||| || ||||||||||||    
T  33871339 ggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgca-ttgtttaatcat 33871437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 33871764 - 33871665
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||  ||||||||||||||||||||| || ||||||||||||    
T  33871764 ggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggcaatttacccttgca-ttgtttaatcat 33871666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 20152781 - 20152880
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||| |||||||| ||||||||||||||||||||  |||||||| ||||||||| ||||||||||| || ||||||||||||    
T  20152781 ggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgca-ttgtttaatcat 20152879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 8875687 - 8875618
Alignment:
Q  308 atgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaat 377  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  8875687 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaat 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 20153341 - 20153245
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||| |||||   ||||||||||||| || ||||||||||||    
T  20153341 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaatc---gcaatttacccttgca-ttgtttaatcat 20153246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 22298564 - 22298641
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||| |||||||||||||    
T  22298564 ttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttacccttaca-ttgtttaatcatt 22298641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 21288083 - 21287984
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||||||||||| |||||| |||| ||||||||||| || ||||||||| ||||| |||||||  |||||| || ||||||||||||    
T  21288083 ggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgca-ttgtttaatcat 21287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 3529251 - 3529171
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||| |||| |||||||||||||    
T  3529251 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctaca-ttgtttaatcatt 3529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 38475408 - 38475328
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| ||| |||||||||||||||||| |||||||||||| || |||||||||||||    
T  38475408 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgca-ttgtttaatcatt 38475328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 3656844 - 3656745
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||||||||  |||||||| |||| |||  |||||| |||| || ||||||||||||    
T  3656844 ggcttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaattagtctttgtaatcgctaattctgataatttatccttgca-ttgtttaatcat 3656746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 6758262 - 6758170
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| |||||| ||||||||||| |||| || |||||    
T  6758262 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattgtt 6758170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 39453319 - 39453399
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  39453319 tccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 39453399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 295 - 402
Target Start/End: Original strand, 5993882 - 5993988
Alignment:
Q  295 aaaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||| |||||||  |||| |||  |||||||||||||| ||| |||||||||| |||  |||||||| |||| |||||||||||||||| || |||||    
T  5993882 aaaattaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgca-ttgtt 5993980  T
Q  395 taatcatt 402  Q
    ||||||||    
T  5993981 taatcatt 5993988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 24141461 - 24141535
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||| ||||||||| ||||||||||||||| |||  ||||||||||||||||||||| ||| ||||    
T  24141461 atgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagcctt 24141535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 1505960 - 1506045
Alignment:
Q  295 aaaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  1505960 aaaattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1506045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 5024427 - 5024347
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||| |||||||| |||||||| ||||||||| || || |||||||||||||    
T  5024427 tccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgca-ttgtttaatcatt 5024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 11761768 - 11761848
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||| | || |||||||||||||    
T  11761768 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgca-ttgtttaatcatt 11761848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 16082996 - 16083076
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||| |||||||| ||  ||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  16082996 tccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgca-ttgtttaatcatt 16083076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 16157264 - 16157184
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  | ||||||||||||||| |||||||||||| || |||||||||||||    
T  16157264 tccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgca-ttgtttaatcatt 16157184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 20814544 - 20814464
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||| |||||||| ||||||| ||||||||| ||| || |||||||||||||    
T  20814544 tccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgca-ttgtttaatcatt 20814464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 24547534 - 24547454
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| ||||||||||||||||||||| || |||||||||||||    
T  24547534 tccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 24547454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 35512167 - 35512247
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||| | ||| |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  35512167 tccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 35512247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 394
Target Start/End: Complemental strand, 41930910 - 41930821
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||| || ||||||| |||||||||||||||||||||| |||  |||||| | ||||||| |||||||| |||| || |||||    
T  41930910 ttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgtt 41930821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 6757883 - 6757943
Alignment:
Q  320 gtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||||||||||||||||||||||| |||  |||||| | ||||||||||||||||    
T  6757883 gtccttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaattta 6757943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 41930516 - 41930608
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || ||||||||||||||  ||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  41930516 ggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 41930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 186440 - 186518
Alignment:
Q  323 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||| ||||||| ||| ||||||||||||||| ||||||||||||| |||| |||||| |||| || |||||||||||||    
T  186440 cttgaaattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgca-ttgtttaatcatt 186518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 197
Target Start/End: Complemental strand, 23173116 - 23172981
Alignment:
Q  62 tttgtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttatta 161  Q
    |||||||| || ||||||||||||||  ||||||||||||||||||| |  |||||| || ||| |||||| ||         ||||||| | |||||||    
T  23173116 tttgtttatgggtggtttttaagggggttttgttcgagccggtgtttatagggcaactgatttctccttgtttgtattttttttccacccgagcttatta 23173017  T
Q  162 gtgctccttgcacgggctaattggttgataatattt 197  Q
    ||||| ||||||||||||  |||||| |||||||||    
T  23173016 gtgcttcttgcacgggcttgttggttaataatattt 23172981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 402
Target Start/End: Complemental strand, 13362634 - 13362557
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||| |||||||||| |||  |||||||| ||||| ||||||||||||||| || |||||||||||||    
T  13362634 ttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgca-ttgtttaatcatt 13362557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 402
Target Start/End: Original strand, 13962878 - 13962963
Alignment:
Q  316 ttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||| |||||||||||||| ||| |||||||||| |||  |||||| | ||||||||| ||||||||||| || |||||||||||||    
T  13962878 ttttatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgca-ttgtttaatcatt 13962963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 27587167 - 27587229
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||||||||||||||    
T  27587167 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 27587229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 31482402 - 31482480
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  31482402 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 31482480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 31482799 - 31482721
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  31482799 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctggcatttta 31482721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 38442090 - 38442167
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| || ||||||||||| |||| |||||||| |||||||| |||||||| ||| || |||||||||||||    
T  38442090 ttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgca-ttgtttaatcatt 38442167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 40148907 - 40148981
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||| |||||||||   ||||||||||||| ||| ||||||||||||||||| |||| ||||||||    
T  40148907 atgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctt 40148981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 40150233 - 40150159
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||  |||||||||||||||| | || ||||||||    
T  40150233 atgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctt 40150159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 2292149 - 2292222
Alignment:
Q  59 tcttttgtttagggttggtttt-taaggggtatttgttcgagccggtg-tttgtgcggcaaccgacttcccctt 130  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||| |||||  ||||||||| ||||||||    
T  2292149 tcttttgtttaggggtggttttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttcccctt 2292222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 17202418 - 17202487
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    ||||| |||||||| ||| |||||||||| |||| |||||||| |||||||| |||||||||||| ||||    
T  17202418 tccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcatt 17202487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 19892717 - 19892637
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||  ||| |||||||||| |||  ||||||||||||||||  |||||||||||| || |||||||||||||    
T  19892717 tccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgca-ttgtttaatcatt 19892637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 20840552 - 20840621
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||| ||| |||||||||| ||   |||||||||||||||| ||||||||||||| ||||    
T  20840552 tccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaatcctagcaatttacccttgcatt 20840621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 297009 - 297085
Alignment:
Q  297 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctgg 373  Q
    |||| |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | |||||||||    
T  297009 aattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgg 297085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 1506357 - 1506286
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  1506357 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1506286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 9931932 - 9931877
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccct 129  Q
    |||||||| ||| || ||||||||||| |||||||||||||||||||| |||||||    
T  9931932 tggtttttgaggtgtttttgttcgagctggtgtttgtgcggcaaccgatttcccct 9931877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 394
Target Start/End: Complemental strand, 5256421 - 5256348
Alignment:
Q  320 gtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||||||| ||| |||||||||| |||||||||||   ||||||| |||| ||| |||||||||||||    
T  5256421 gtccttgcaattagg-gtcgtttaaaaattggtcaatgtaatgactaatccttgcaaattagccttacatttgtt 5256348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 18247105 - 18247172
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||| ||| |||||||||| ||| ||||||||| ||||  ||||||||||||||| ||||    
T  18247105 tccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcatt 18247172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 28771247 - 28771185
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    |||||| ||||||| ||| |||||||||| ||| ||||||||| ||||| |||||||||||||    
T  28771247 tccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttaccc 28771185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 369
Target Start/End: Complemental strand, 6150829 - 6150781
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatc 369  Q
    |||||||||||||| ||| |||||||||||||| ||||| |||||||||    
T  6150829 tccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatc 6150781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 297404 - 297333
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||| ||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  297404 tgatgtgtttagcccttgtaattaggcgacatttaaaaattcgtccctgtaattgctaatcctggcatttta 297333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 17544077 - 17544147
Alignment:
Q  331 taggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||| |||||||||||||||  |||||| | |||||||| |||||||| ||| || |||||||||||||    
T  17544077 taggcgtgatttaaaaattagtccctgtaattgctaatcctgacaatttactcttgca-ttgtttaatcatt 17544147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 19892327 - 19892382
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||||||||||| ||||    
T  19892327 tccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaa 19892382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 24205016 - 24204938
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||| |||| || ||||||||||| ||| ||||||||||  ||| |||||||| |||||||| |||||||||||| ||||    
T  24205016 atgtattttatctttgcaattaggggtcgtttaaaaattgatca-tgtaatcgctaatcctgacaatttacccttgcatt 24204938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 2292079 - 2292121
Alignment:
Q  2 ggtgttgacgcaagggtatgcatgtggtttgtcatatctatat 44  Q
    |||||||||||| ||||||||||| |||||||||||| |||||    
T  2292079 ggtgttgacgcaggggtatgcatgcggtttgtcatatgtatat 2292121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 6150473 - 6150553
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| ||  ||||||||  |||||||| |||||||  ||| || |||||||||||||    
T  6150473 tccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgca-ttgtttaatcatt 6150553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 14194831 - 14194752
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||| ||| |||||||||| | || ||||||   ||||||||||||||||||||| || |||||||||||||    
T  14194831 tccttgtaattaggggtcgtttaaaaattggcca-tgtaattactaatcctggcaatttacccttgca-ttgtttaatcatt 14194752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 16156876 - 16156929
Alignment:
Q  323 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||| ||| |||||||||| ||| ||||| ||||||||||| ||||    
T  16156876 cttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaa 16156929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 25539813 - 25539881
Alignment:
Q  65 gtttagggttggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 134  Q
    |||| ||| ||||||||||||||| ||||||||||||| ||||||   ||||||||| |||| |||||||    
T  25539813 gttttggggtggtttttaaggggtttttgttcgagccgatgtttg-atggcaaccgatttcctcttgtat 25539881  T

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Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 29646770 - 29646691
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||| ||| ||||||| || ||  ||||||||| |||||||| |||||||||||| || |||||||||||||    
T  29646770 tccttgtaattaggagtcgtttaaaa-ttggtgcatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 29646691  T

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Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 30005175 - 30005232
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    ||||||||||| |||||||||||||||||  || |||| | |||||||| ||||||||    
T  30005175 ttgcaattaggtgtcatttaaaaattagttcatataattgctaatcctgacaatttac 30005232  T

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Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 32242261 - 32242341
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||||||||||  ||  |||||| | ||||| ||||||||||| ||| || |||||||||||||    
T  32242261 tccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgca-ttgtttaatcatt 32242341  T

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Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 8710894 - 8710795
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| || ||||||||||||    
T  8710894 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 8710796  T

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Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 28226170 - 28226071
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||    
T  28226170 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 28226072  T

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Target: chr2; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 15604339 - 15604438
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| || ||||||||||||    
T  15604339 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcat 15604437  T

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Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 15604762 - 15604666
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  15604762 ttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 15604666  T

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Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 8342190 - 8342286
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||| |||| || |||||||||||||    
T  8342190 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaatttatccttgca-ttgtttaatcatt 8342286  T

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Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 402
Target Start/End: Complemental strand, 41588483 - 41588385
Alignment:
Q  303 gcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||||||||  |||||||| |||| |||||||||||| |||||| |||||||||||||    
T  41588483 gcttaataatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttaca-ttgtttaatcatt 41588385  T

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Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 6573543 - 6573642
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||||||||||||  ||| | ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||  | ||||||||||||    
T  6573543 ggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttaccctt-gaattgtttaatcat 6573641  T

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Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 303 - 402
Target Start/End: Original strand, 11830365 - 11830463
Alignment:
Q  303 gcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||  |||||| | |||||||  |||||||||||| || |||||||||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttacccttgca-ttgtttaatcatt 11830463  T

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Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 6573050 - 6573127
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||    
T  6573050 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaatttacc 6573127  T

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Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 305 - 390
Target Start/End: Complemental strand, 8342602 - 8342517
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||  |||||||| |||||||||||| ||||    
T  8342602 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcatt 8342517  T

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Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 41587235 - 41587333
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||| |||  |||||||||||||||||| || |||||||| || ||||||||||||    
T  41587235 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtc-ctgtaatcgttaatcctggaaaattacccttgca-ttgtttaatcat 41587332  T

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Target: chr2; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 25892394 - 25892493
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||||||||||||  ||  || |||||||| ||||||||||||| ||| ||||||||| |||||||||||| |||||||| || ||||||||||||    
T  25892394 ggcttaatgatgtgtttcatctatgaaattaggcttcatttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttcca-ttgtttaatcat 25892492  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 202775 - 202701
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    ||||||||||||| || ||||||| |||||||||||||| ||| |||||||||||||||||||||| ||| ||||    
T  202775 atgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagcctt 202701  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 39498329 - 39498409
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| ||||||| ||| |||||||||| |||  |||||||||||||||||||||||||||| |||| |||||||||||||    
T  39498329 tccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctaca-ttgtttaatcatt 39498409  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 44714170 - 44714090
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||||||||||||||  |||||| | ||||||||||||||||||||| || |||||||||||||    
T  44714170 tccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgca-ttgtttaatcatt 44714090  T

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Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 14900878 - 14900795
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||||| || ||||||||||||||| ||| |||||||||| |||  |||||| | |||||||||||||||| ||||    
T  14900878 ggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagcctt 14900795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 6589778 - 6589704
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||| |||||||| | |||||||||||||| ||| |||||||||||||| ||||||| ||||||||    
T  6589778 atgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattaccctt 6589704  T

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Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 15848107 - 15848187
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||| ||||||||||| || |||||||||||||    
T  15848107 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgca-ttgtttaatcatt 15848187  T

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Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 378
Target Start/End: Original strand, 14900496 - 14900572
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatt 378  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||| |||  |||||| | ||||||| ||||||    
T  14900496 ggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatccttgcaatt 14900572  T

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Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 380
Target Start/End: Original strand, 13995668 - 13995751
Alignment:
Q  297 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||| |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  13995668 aattaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 13995751  T

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Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 14732470 - 14732344
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgnnnnnnnnctccacccaaacttattagtgctccttgca 173  Q
    ||||||||||||||| ||||||||||| ||| ||| ||||| |||||| ||||||||||||         | |||||| | ||||||||||| ||| |||    
T  14732470 tggtttttaaggggtttttgttcgagctggtatttttgcggtaaccgatttccccttgtattatttttttc-ccacccgagcttattagtgcacctcgca 14732372  T
Q  174 cgggctaattggttgataatattttgcc 201  Q
    ||||||  |||||| |||||||||||||    
T  14732371 cgggcttgttggttaataatattttgcc 14732344  T

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Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 16099076 - 16099154
Alignment:
Q  323 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||| |||||||||||||| |||  |||||||  ||||||||||||||||||| | || |||||||||||||    
T  16099076 cttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgca-ttgtttaatcatt 16099154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 1695740 - 1695818
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  1695740 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 1695818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 13996070 - 13995992
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  13996070 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 13995992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 28228679 - 28228749
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    |||||||| |||| |||||||||| |||||||||||||| |||  |||||||||||||| |||||| ||||    
T  28228679 atgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattac 28228749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 33062050 - 33062128
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  33062050 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33062128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 33062447 - 33062369
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  33062447 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33062369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 33739703 - 33739781
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  33739703 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33739781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 2318178 - 2318257
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||  |||||||||| ||| ||||||||| |||| |||||||||||||||| || |||||||||||||    
T  2318178 tccttgcaattagg-gtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgca-ttgtttaatcatt 2318257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 10712742 - 10712822
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||  || |||||||||| |||  | ||||| |||||||||||||||||||||| || |||||||||||||    
T  10712742 tccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgca-ttgtttaatcatt 10712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 11163432 - 11163371
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||    
T  11163432 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacc 11163371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 3652222 - 3652294
Alignment:
Q  313 gtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    ||||||||||| |||||| |||  ||||| ||||||| |||||| |||||||||||| |||||| ||||||||    
T  3652222 gtgttttgtccctgcaatcagggatcattcaaaaattggtcaatataatcgttaatcatggcaaattaccctt 3652294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 22051400 - 22051322
Alignment:
Q  323 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||  ||  ||||||||||||||  |||||||| ||||||| ||||||||||||| || |||||||||||||    
T  22051400 cttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgca-ttgtttaatcatt 22051322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 380
Target Start/End: Complemental strand, 33740105 - 33740022
Alignment:
Q  297 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||| |||||| |||||||||| | |||| |||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  33740105 aattaggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 33740022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 41419620 - 41419751
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgta-tgnnnnnnnnctccacccaaacttattagtgctccttgc 172  Q
    ||||||||||||||| |||||||||| |||||||  |  ||||||||| ||||||||||| |          ||||||| | |||||||||||  |||||    
T  41419620 tggtttttaaggggtttttgttcgagtcggtgttattatggcaaccgatttccccttgtatttgtttttttttccacccgagcttattagtgcatcttgc 41419719  T
Q  173 acgggctaattggttgataatattttgccaat 204  Q
    |||||||  |||||| ||||||||||||||||    
T  41419720 acgggcttgttggttaataatattttgccaat 41419751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 28230158 - 28230084
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||| || ||||| | |||||||||||||| |||  |||||||||||||||| |||| ||||||||    
T  28230158 atgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctt 28230084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 36382155 - 36382260
Alignment:
Q  296 aaattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgttt 395  Q
    ||||| |||||||  |||| |||  ||||||||||||||  || |||||||||| |||  | |||||| |||||||| |||||||||||| || ||||||    
T  36382155 aaattaggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgca-ttgttt 36382253  T
Q  396 aatcatt 402  Q
    |||||||    
T  36382254 aatcatt 36382260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 36479740 - 36479817
Alignment:
Q  324 ttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| ||| |||||||||| ||| ||||||||| ||||| | ||| ||||||||| || |||||||||||||    
T  36479740 ttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgca-ttgtttaatcatt 36479817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 39936665 - 39936592
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| |||| |||||||||||||  ||||||| || |||  ||||||||||||||||||||| ||||||||    
T  39936665 atgtgtttcgtccctgcaattaggcgtggtttaaaa-ttggtccttgtaatcgttaatcctggcaaattaccctt 39936592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 41248956 - 41248878
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  41248956 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 41248878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 199030 - 199095
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||| |||| ||||||||||  ||||||||||||||||   |||||||||||||||| ||||    
T  199030 atgtgtttagtccctgcaattagggatcatttaaaaattagttcctgtaatcgttaatccttgcaa 199095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 45556131 - 45556211
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||  || |||||||||| |||  |||||||| |||||||||||||||| || | || |||||||||||||    
T  45556131 tccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgca-ttgtttaatcatt 45556211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 1696130 - 1696059
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| |||||||||||| ||   |||||| | ||||||||||| ||||    
T  1696130 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgctaatcctggcatttta 1696059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 41248566 - 41248637
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | ||||||||||||||| ||||||||||||  ||  |||||| | ||||||||||| ||||    
T  41248566 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcatttta 41248637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 43742095 - 43742021
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||| ||| |||| ||||||| |  |||||||||||||| ||| |||||||| ||||||||| ||| ||||||||    
T  43742095 atgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattaccctt 43742021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 3653473 - 3653425
Alignment:
Q  336 gtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||||||| ||| |||||||||||||| ||||||| ||||||||    
T  3653473 gtcatttaaaaattggtccatgtaatcgttaat-ctggcaaattaccctt 3653425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 6657897 - 6657977
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| || ||| |||||||||| |||  |||||||  ||||| ||||||||||||| | || |||||||||||||    
T  6657897 tccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgca-ttgtttaatcatt 6657977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 34447832 - 34447901
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||| ||||||| |||||||||||||| |||  | ||||||  ||||||| |||||||||||| ||||    
T  34447832 tccttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcatt 34447901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 38908672 - 38908731
Alignment:
Q  74 tggtttttaaggggtatttgttcgagccggtgtttgtgcggcaaccgacttccccttgtat 134  Q
    ||||||||||||||| ||||||||| ||||||||| || ||| ||||| || |||||||||    
T  38908672 tggtttttaaggggtttttgttcgaaccggtgttt-tgtggctaccgattttcccttgtat 38908731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 390
Target Start/End: Original strand, 7905244 - 7905331
Alignment:
Q  303 gcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcatt 7905331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 7160807 - 7160903
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||| || |||||||||||||    
T  7160807 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgca-ttgtttaatcatt 7160903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 22502777 - 22502873
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  22502777 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 22502873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 6517503 - 6517583
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  6517503 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaatttacc 6517583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 22503200 - 22503101
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||| || ||||||||||||    
T  22503200 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgca-ttgtttaatcat 22503102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 21836035 - 21836130
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  21836035 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtc-ttgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 21836130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 31407301 - 31407205
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  31407301 ttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 31407205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 21836456 - 21836357
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||   |||||||| |||||||| |||||||||||| || ||||||||||||    
T  21836456 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 21836358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 32593490 - 32593582
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||  | |||||| |||||||| |||||||||||| ||||||||    
T  32593490 ggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgtt 32593582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 379
Target Start/End: Original strand, 31406878 - 31406955
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattt 379  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  31406878 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaattt 31406955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 10781147 - 10781230
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||  || |||||||| || |||||||||||||||    
T  10781147 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgcaatcgttattcgtggcaatttaccctt 10781230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 7161230 - 7161131
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||  | |||||  |||||||| |||||||||||| || ||||||||||||    
T  7161230 ggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgca-ttgtttaatcat 7161132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 7905666 - 7905570
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||| |||  | |||||| |||| |||||||||||||||| || |||||||||||||    
T  7905666 ttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgca-ttgtttaatcatt 7905570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 15913551 - 15913647
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||  |||||| | |||| |||| ||||||||||| || |||||||||||||    
T  15913551 ttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgca-ttgtttaatcatt 15913647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 30803880 - 30803960
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||| |||| ||| ||||||||||  || |||||||||||||||||||||||||||||||||| |||||||||||||    
T  30803880 tccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttaca-ttgtttaatcatt 30803960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 394
Target Start/End: Complemental strand, 14197011 - 14196920
Alignment:
Q  303 gcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  14197011 gcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 14196920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 14196615 - 14196693
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | |||| |||||||||||    
T  14196615 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaattta 14196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 12065223 - 12065319
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||| ||||  || |||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||  |||  ||||||||||    
T  12065223 ttaatgatgcgtttcatctttgcaattaggcatcatttaaaaattagtc-atgtaatcgctaattctggcaatttacccttgtattgttttaatcatt 12065319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 383
Target Start/End: Complemental strand, 15913974 - 15913893
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||| ||| || |||||||||||| ||| || ||||||    
T  15913974 ggcttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattaccc 15913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 394
Target Start/End: Original strand, 25485956 - 25486045
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||| || ||||||||||||| |||||||||||||||| |||  |||||| | |||||||||||||||| |||| || |||||    
T  25485956 ttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgtt 25486045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 362870 - 362948
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| ||||||||||||| ||||    
T  362870 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcatttta 362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 30337468 - 30337537
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| ||||||||||||||||||||| ||||    
T  30337468 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcatt 30337537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 380
Target Start/End: Complemental strand, 363232 - 363149
Alignment:
Q  297 aattgggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||| |||||| |||||||||| | ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  363232 aatttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 15859084 - 15859154
Alignment:
Q  62 tttgtttagggttggttttt--aaggggtatttgttcgagccggtgtttgtgcggcaaccgacttcccctt 130  Q
    ||||||||||| ||||||||  ||||||| |||||||||||||||||||||  ||||||||| ||||||||    
T  15859084 tttgtttaggggtggttttttaaaggggtttttgttcgagccggtgtttgtttggcaaccgatttcccctt 15859154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 22373085 - 22373007
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||| ||||| ||||||||||||||| |||||||||||| |||  |||||| | ||||||||||| ||||    
T  22373085 ggcttattgatgttttttgcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 22373007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 21628122 - 21628042
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||  ||||||||| |||  |||||||| |||||||| |||||||||||| || |||||||||||||    
T  21628122 tccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcatt 21628042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 33517553 - 33517633
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||| |||||||  || |||||||||| |||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  33517553 tccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 33517633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 28000782 - 28000690
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||| |||| ||||| | ||||||||||||||| |||||||||||| |||  |||||| | |||| ||||||||||| |||| || |||||    
T  28000782 ggcttattgatctgtttagcccttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggcaatttagccttgcaattgtt 28000690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 10781550 - 10781496
Alignment:
Q  336 gtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatt 390  Q
    |||||||||||||||| || ||||||||||||||||| ||||||| |||| ||||    
T  10781550 gtcatttaaaaattagccattgtaatcgttaatcctgacaatttatccttgcatt 10781496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 3059276 - 3059356
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||| | ||| |||||||  | ||| ||||||||| ||||||| ||||||||||||| || |||||||||||||    
T  3059276 tccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgca-ttgtttaatcatt 3059356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 8089466 - 8089542
Alignment:
Q  325 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||| ||| |||||||||| |||  | |||||||||||||| |||| |||||||| || |||||||||||||    
T  8089466 tgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgca-ttgtttaatcatt 8089542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 12080655 - 12080735
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| ||||||||||  ||  |||||||| ||||| ||||||||||||| | || |||||||||||||    
T  12080655 tccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgca-ttgtttaatcatt 12080735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 28498444 - 28498379
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||| |||| ||||||||||  ||||||||||||| |||  |||||||| ||||||||||||    
T  28498444 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaa 28498379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 33984672 - 33984814
Alignment:
Q  2 ggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattct------------cttttgtttagggttggttttt-aaggggt 88  Q
    |||||||||||| ||||||||||||||| |||||| | ||||| |  |||||||||||            |||||||||| || |||||||| |||||||    
T  33984672 ggtgttgacgcaggggtatgcatgtggtgtgtcatttgtatattcccgcgtcaattctcttgggttggtgcttttgtttatgggtggtttttgaaggggt 33984771  T
Q  89 atttgttcgagccggtgtttgtgcggcaaccgacttccccttg 131  Q
     ||||||||| || ||||||||  ||||||||| |||||||||    
T  33984772 ttttgttcgaaccagtgtttgtatggcaaccgatttccccttg 33984814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 6575797 - 6575853
Alignment:
Q  145 tccacccaaacttattagtgctccttgcacgggctaattggttgataatattttgcc 201  Q
    ||||||| |||||||||||||| ||||||||||||  ||| || |||||||||||||    
T  6575797 tccacccgaacttattagtgcttcttgcacgggcttgttgattaataatattttgcc 6575853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 394
Target Start/End: Complemental strand, 25486323 - 25486231
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    ||||||||||| || || |||||||||| || ||||| |||||||||| |||  |||||| | |||||| ||||||||| |||| || |||||    
T  25486323 ggcttaatgatatggttagtccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattgtt 25486231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 26463202 - 26463262
Alignment:
Q  325 tgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||||| ||| |||||||||| |||  |||| |||||||||||||||| ||||||||    
T  26463202 tgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattaccctt 26463262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 376
Target Start/End: Complemental strand, 30337827 - 30337772
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaa 376  Q
    |||||||||||||| |||||||||||||| |||  |||||||| ||||||| ||||    
T  30337827 tccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaa 30337772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 30725781 - 30725858
Alignment:
Q  323 cttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||| ||| |||||||||| |||  |||||||| |||||||| |||||||||||| ||  ||||||||||||    
T  30725781 cttgcaattagg-gtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgca-ctgtttaatcatt 30725858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 141159 - 141089
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    |||||||| ||||||||||||||  || ||||||||||| ||   |||||||||||||||| |||| ||||    
T  141159 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattac 141089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 149180 - 149110
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttac 381  Q
    |||||||| ||||||||||||||  || ||||||||||| ||   |||||||||||||||| |||| ||||    
T  149180 atgtgtttcgtccttgcaattagatgttatttaaaaatttgttcctgtaatcgttaatccttgcaaattac 149110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 380
Target Start/End: Original strand, 22367425 - 22367503
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| ||||||  |||| ||||||||||||||  |||||||||||| |||  |||||| | ||||||||||| ||||    
T  22367425 ggcttattgatgttatttgcccttgcaattaggcagcatttaaaaattcgtccctgtaattgctaatcctggcatttta 22367503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33112931 - 33112865
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtcaattctcttttgtt 67  Q
    |||||||| |||| | ||||||| |||||||||||||| ||||||| |||| || | ||||||||||    
T  33112931 tggtgttgtcgcacgagtatgcacgtggtttgtcatatgtatatgcctgcgacattactcttttgtt 33112865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 3176429 - 3176376
Alignment:
Q  329 attaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacc 382  Q
    |||||| |||||||||||||| |||| ||||||||||||| ||| ||| |||||    
T  3176429 attaggggtcatttaaaaattggtcactgtaatcgttaattctgtcaaattacc 3176376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 17734572 - 17734492
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||| |||||| | ||| ||||||||||  || ||||||||| |||||||  |||||||||||| || |||||||||||||    
T  17734572 tccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgca-ttgtttaatcatt 17734492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34761078 - 34761131
Alignment:
Q  1 tggtgttgacgcaagggtatgcatgtggtttgtcatatctatatgcttgcgtca 54  Q
    ||||||||||||| |||||| |||| || ||||||||| ||||||| |||||||    
T  34761078 tggtgttgacgcaggggtattcatgaggattgtcatatgtatatgcctgcgtca 34761131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 139817 - 139875
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcct 371  Q
    ||||||||||| | || ||||||| |||||||||||||| |||| ||||||||||||||||    
T  139817 atgtgttttgttcctgtaattagg-gtcatttaaaaattggtca-tgtaatcgttaatcct 139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 371
Target Start/End: Original strand, 147838 - 147896
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcct 371  Q
    ||||||||||| | || ||||||| |||||||||||||| |||| ||||||||||||||||    
T  147838 atgtgttttgttcctgtaattagg-gtcatttaaaaattggtca-tgtaatcgttaatcct 147896  T

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Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 28000392 - 28000432
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaatt 349  Q
    |||||||||| | ||||||||||||||| ||||||||||||    
T  28000392 tgatgtgtttagcccttgcaattaggcggcatttaaaaatt 28000432  T

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Target: scaffold0771 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 920 - 1019
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||||| || ||||||||||||    
T  920 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgca-ttgtttaatcat 1018  T

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Target: scaffold0771; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 1261 - 1211
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagt 352  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1261 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 1211  T

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Target: scaffold0006 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 222215 - 222116
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcat 401  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||| || ||||||||||||    
T  222215 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgca-ttgtttaatcat 222117  T

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Target: scaffold0006; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 221794 - 221889
Alignment:
Q  305 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||    
T  221794 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtc-ttgtaatcgctaatcctggcaatttacccttgca-ttgtttaatcatt 221889  T

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Target: scaffold0599 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 2395 - 2492
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| ||  |||||||| ||||||| ||||||||||||| || |||||||||||||    
T  2395 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgca-ttgtttaatcatt 2492  T

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Target: scaffold0042 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 12204 - 12107
Alignment:
Q  304 cttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||| ||   ||||||| ||||||| ||||||||||||| || |||||||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgca-ttgtttaatcatt 12107  T

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Target: scaffold0205 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 302 - 394
Target Start/End: Original strand, 21009 - 21101
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtt 394  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||| |||||||| |||| || |||||    
T  21009 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgtt 21101  T

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Target: scaffold0205; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 21366 - 21288
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||||||| || ||||||||||||||  ||| |||||||||| |||  |||||| | ||||| ||||||||||    
T  21366 ggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggcaattta 21288  T

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Target: scaffold0031 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 68984 - 69064
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| |||||||||||||| |||  |||||||  ||||||||||||||||||||| || |||||||||||||    
T  68984 tccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgca-ttgtttaatcatt 69064  T

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Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 139691 - 139753
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||||||||||||||    
T  139691 tccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccc 139753  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 239970 - 239896
Alignment:
Q  311 atgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccctt 385  Q
    |||||||| ||||||||| ||||| |||||||||||||| ||   |||||||| |||||||||||| ||||||||    
T  239970 atgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattaccctt 239896  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 1788 - 1868
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| || ||||||| |||  |||||||| ||||| ||||||||||||||| || |||||||||||||    
T  1788 tccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgca-ttgtttaatcatt 1868  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 402
Target Start/End: Complemental strand, 37972 - 37892
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttacccttacatttgtttaatcatt 402  Q
    |||||||||||||| ||| |||||||||| |||  |||||||| |||||||| ||||||||||||  | |||||||||||||    
T  37972 tccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgta-ttgtttaatcatt 37892  T

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Target: scaffold0075 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 14799 - 14737
Alignment:
Q  321 tccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaatttaccc 383  Q
    |||||||||||||| ||| |||||||||| |||  | |||||| |||||||||||||||||||    
T  14799 tccttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctggcaatttaccc 14737  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 141991 - 141913
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||| |||||||||| | ||||||||||||||| ||||||||||||  ||  |||||| | ||||||||||| ||||    
T  141991 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcatttta 141913  T

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Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Original strand, 141601 - 141672
Alignment:
Q  309 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctggcaattta 380  Q
    |||||||||| | |||||||||||| || |||||||||||| |||  |||||| | ||||||||||| ||||    
T  141601 tgatgtgtttagcccttgcaattagacggcatttaaaaattcgtccctgtaattgctaatcctggcatttta 141672  T

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Target: scaffold0559 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 372
Target Start/End: Original strand, 1233 - 1303
Alignment:
Q  302 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgttaatcctg 372  Q
    |||||| ||||||||||   ||||||||||||||| |||||||||||| |||  |||||| | ||||||||    
T  1233 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 1303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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