View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0559_low_25 (Length: 313)
Name: NF0559_low_25
Description: NF0559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0559_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 74 - 244
Target Start/End: Original strand, 38341575 - 38341745
Alignment:
| Q |
74 |
cagagaacgtgttatcttttacacactcttggagtatattttatttgtgggtacaagcttattgcaagtcgtatacattcgtcgtctcttcagcaaatca |
173 |
Q |
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| T |
38341575 |
cagaaaacgtgttatcttttacacactcttggagtatattttatttgtgggtacaagcttattgcaagtcgtatacattcgtcgtctcttcagcaaatca |
38341674 |
T |
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| Q |
174 |
tttgcttacaaccgagtgtagaatcacaatgtattgtggtgacaattattttgtttttcctattgatcatt |
244 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38341675 |
tttgcttacaaccgagtgtagaatcacaatgtattgtggtgacaattattttgtttttcctattgatcatt |
38341745 |
T |
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