View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0559_low_35 (Length: 273)

Name: NF0559_low_35
Description: NF0559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0559_low_35
NF0559_low_35
[»] chr1 (62 HSPs)
chr1 (52-155)||(29203645-29203753)
chr1 (158-240)||(27172118-27172200)
chr1 (159-240)||(999115-999196)
chr1 (158-240)||(999494-999576)
chr1 (158-240)||(20480170-20480252)
chr1 (158-240)||(49317754-49317836)
chr1 (158-240)||(49318135-49318217)
chr1 (157-240)||(50526441-50526525)
chr1 (158-240)||(9347128-9347211)
chr1 (158-240)||(48105085-48105168)
chr1 (158-240)||(9347520-9347602)
chr1 (159-240)||(50430050-50430132)
chr1 (158-240)||(50615590-50615672)
chr1 (158-240)||(50623418-50623500)
chr1 (158-230)||(20480591-20480663)
chr1 (158-240)||(13918448-13918531)
chr1 (158-240)||(20371321-20371404)
chr1 (158-240)||(26814696-26814779)
chr1 (158-240)||(28633722-28633805)
chr1 (158-232)||(32163020-32163095)
chr1 (159-240)||(46823846-46823928)
chr1 (159-240)||(48104681-48104763)
chr1 (158-240)||(49318412-49318494)
chr1 (158-232)||(6703871-6703946)
chr1 (158-240)||(13918836-13918919)
chr1 (158-240)||(26815088-26815171)
chr1 (158-240)||(46824247-46824330)
chr1 (158-231)||(4692411-4692485)
chr1 (159-240)||(28634126-28634208)
chr1 (159-232)||(42611188-42611262)
chr1 (158-232)||(47498303-47498376)
chr1 (159-240)||(44224088-44224169)
chr1 (153-240)||(6703457-6703545)
chr1 (158-238)||(20371042-20371121)
chr1 (158-240)||(21687027-21687110)
chr1 (158-232)||(27172518-27172593)
chr1 (159-240)||(42611583-42611665)
chr1 (158-231)||(21687445-21687518)
chr1 (153-240)||(44911022-44911110)
chr1 (169-240)||(44911406-44911477)
chr1 (160-240)||(50949534-50949615)
chr1 (153-240)||(19008719-19008807)
chr1 (158-232)||(49284411-49284486)
chr1 (158-240)||(50429658-50429741)
chr1 (158-240)||(4692024-4692106)
chr1 (158-217)||(19007737-19007796)
chr1 (156-205)||(17518606-17518655)
chr1 (176-225)||(32162750-32162799)
chr1 (158-211)||(47498493-47498546)
chr1 (159-231)||(50949164-50949237)
chr1 (158-209)||(1176719-1176770)
chr1 (158-232)||(6002239-6002314)
chr1 (158-232)||(39691977-39692052)
chr1 (157-232)||(6002871-6002947)
chr1 (158-205)||(13589663-13589710)
chr1 (158-204)||(50615242-50615289)
chr1 (158-204)||(50623070-50623117)
chr1 (158-211)||(8108991-8109045)
chr1 (158-211)||(48190773-48190827)
chr1 (183-232)||(49285032-49285081)
chr1 (169-209)||(41082923-41082963)
chr1 (158-205)||(47955308-47955356)
[»] chr4 (41 HSPs)
chr4 (158-240)||(48405964-48406046)
chr4 (158-240)||(4239335-4239418)
chr4 (158-240)||(25161880-25161963)
chr4 (158-240)||(28196742-28196825)
chr4 (158-240)||(32703619-32703702)
chr4 (146-239)||(292772-292866)
chr4 (151-240)||(28196341-28196431)
chr4 (153-240)||(9023241-9023329)
chr4 (153-240)||(39744434-39744522)
chr4 (158-240)||(9380309-9380392)
chr4 (158-240)||(9380710-9380793)
chr4 (158-240)||(43292326-43292409)
chr4 (158-240)||(26207363-26207445)
chr4 (158-240)||(169015-169099)
chr4 (158-240)||(169408-169491)
chr4 (158-232)||(293194-293269)
chr4 (158-240)||(9023649-9023732)
chr4 (158-240)||(43292039-43292122)
chr4 (158-240)||(23539843-23539924)
chr4 (151-240)||(39744025-39744115)
chr4 (170-240)||(44468892-44468962)
chr4 (159-240)||(12757770-12757851)
chr4 (159-240)||(48406354-48406435)
chr4 (158-240)||(23540221-23540304)
chr4 (158-240)||(26207715-26207798)
chr4 (158-240)||(32703227-32703310)
chr4 (158-240)||(39086592-39086675)
chr4 (158-232)||(39912464-39912538)
chr4 (159-240)||(12758173-12758254)
chr4 (158-232)||(50678781-50678856)
chr4 (170-240)||(25162282-25162352)
chr4 (159-232)||(36096452-36096526)
chr4 (158-232)||(36095819-36095894)
chr4 (158-232)||(50679401-50679476)
chr4 (158-232)||(39912056-39912130)
chr4 (158-232)||(43051229-43051304)
chr4 (158-232)||(56505695-56505770)
chr4 (151-211)||(11241659-11241719)
chr4 (158-205)||(3930484-3930531)
chr4 (159-232)||(43050610-43050684)
chr4 (153-232)||(45830173-45830253)
[»] chr8 (40 HSPs)
chr8 (151-240)||(6199065-6199155)
chr8 (151-240)||(37396703-37396793)
chr8 (158-240)||(24473737-24473820)
chr8 (158-240)||(41662523-41662606)
chr8 (159-232)||(25439103-25439176)
chr8 (158-240)||(37397114-37397197)
chr8 (159-232)||(34498125-34498199)
chr8 (158-240)||(9623504-9623587)
chr8 (158-240)||(17431289-17431372)
chr8 (169-232)||(20861615-20861678)
chr8 (158-240)||(24473345-24473428)
chr8 (158-232)||(13936725-13936799)
chr8 (159-240)||(15444616-15444698)
chr8 (156-219)||(25438792-25438856)
chr8 (153-240)||(34498524-34498612)
chr8 (158-240)||(16169176-16169258)
chr8 (153-240)||(6198655-6198743)
chr8 (158-232)||(9823338-9823413)
chr8 (158-232)||(15444213-15444288)
chr8 (158-240)||(16169576-16169659)
chr8 (158-232)||(39724025-39724100)
chr8 (159-232)||(13027258-13027332)
chr8 (153-240)||(2856523-2856611)
chr8 (153-232)||(13026632-13026712)
chr8 (158-232)||(3307340-3307415)
chr8 (156-217)||(33726694-33726756)
chr8 (178-240)||(33727074-33727136)
chr8 (183-232)||(39723430-39723479)
chr8 (158-232)||(9822750-9822825)
chr8 (154-232)||(15442761-15442840)
chr8 (158-232)||(22851392-22851467)
chr8 (158-232)||(6092779-6092852)
chr8 (158-225)||(9623864-9623933)
chr8 (158-232)||(13937366-13937441)
chr8 (158-205)||(43162236-43162283)
chr8 (156-205)||(765734-765784)
chr8 (163-209)||(7127660-7127706)
chr8 (159-232)||(15042148-15042222)
chr8 (158-205)||(12281126-12281174)
chr8 (158-205)||(41662407-41662455)
[»] chr7 (40 HSPs)
chr7 (158-240)||(13744202-13744284)
chr7 (158-240)||(9035262-9035345)
chr7 (158-240)||(10533036-10533119)
chr7 (158-240)||(36527767-36527850)
chr7 (158-240)||(37888835-37888918)
chr7 (158-240)||(37889228-37889311)
chr7 (158-240)||(37972365-37972448)
chr7 (159-240)||(20418891-20418973)
chr7 (151-240)||(37971955-37972045)
chr7 (158-240)||(48359322-48359404)
chr7 (159-232)||(22740568-22740641)
chr7 (158-240)||(20419293-20419376)
chr7 (158-240)||(22740158-22740241)
chr7 (158-240)||(29292924-29293007)
chr7 (158-240)||(3204671-3204752)
chr7 (159-240)||(18863970-18864052)
chr7 (158-240)||(18864371-18864453)
chr7 (159-240)||(42418997-42419079)
chr7 (158-240)||(3205062-3205145)
chr7 (158-240)||(13741559-13741642)
chr7 (158-240)||(17156969-17157052)
chr7 (160-240)||(48359627-48359707)
chr7 (158-240)||(42418593-42418676)
chr7 (153-240)||(9034864-9034953)
chr7 (159-223)||(36527387-36527451)
chr7 (158-240)||(29293315-29293398)
chr7 (153-232)||(46816288-46816368)
chr7 (158-240)||(38826882-38826965)
chr7 (158-232)||(44599491-44599566)
chr7 (158-232)||(44600112-44600187)
chr7 (153-232)||(13863310-13863390)
chr7 (158-232)||(13863934-13864008)
chr7 (158-219)||(16198967-16199029)
chr7 (153-232)||(8643743-8643823)
chr7 (158-208)||(27096049-27096099)
chr7 (159-209)||(27096342-27096392)
chr7 (159-209)||(27181911-27181961)
chr7 (158-208)||(27182204-27182254)
chr7 (153-205)||(9412329-9412382)
chr7 (158-205)||(3687660-3687708)
[»] chr6 (22 HSPs)
chr6 (159-240)||(32733965-32734047)
chr6 (158-240)||(10087827-10087910)
chr6 (158-240)||(33974268-33974351)
chr6 (158-240)||(22755058-22755141)
chr6 (158-240)||(22684327-22684409)
chr6 (158-240)||(22754659-22754741)
chr6 (158-240)||(29074341-29074423)
chr6 (158-240)||(29079105-29079187)
chr6 (158-240)||(29106914-29106996)
chr6 (158-240)||(7654517-7654600)
chr6 (169-232)||(32733571-32733634)
chr6 (158-240)||(2354411-2354493)
chr6 (158-232)||(33828992-33829067)
chr6 (158-232)||(33829613-33829688)
chr6 (158-232)||(13177033-13177107)
chr6 (160-240)||(13176624-13176704)
chr6 (158-240)||(2354779-2354862)
chr6 (159-205)||(3825530-3825576)
chr6 (153-205)||(13579655-13579707)
chr6 (159-211)||(31598726-31598778)
chr6 (158-205)||(10039678-10039725)
chr6 (157-218)||(403650-403711)
[»] chr5 (38 HSPs)
chr5 (158-240)||(22729409-22729491)
chr5 (158-240)||(37780322-37780404)
chr5 (159-240)||(43463759-43463840)
chr5 (153-240)||(12498564-12498652)
chr5 (153-240)||(26571133-26571221)
chr5 (158-240)||(25940983-25941066)
chr5 (153-240)||(43464161-43464248)
chr5 (159-240)||(2817152-2817234)
chr5 (151-240)||(12498897-12498987)
chr5 (159-240)||(21207229-21207311)
chr5 (158-232)||(37610204-37610278)
chr5 (156-232)||(2817552-2817628)
chr5 (159-240)||(10098910-10098991)
chr5 (158-240)||(19514527-19514611)
chr5 (152-240)||(26570725-26570814)
chr5 (158-240)||(3888241-3888324)
chr5 (158-238)||(10098521-10098602)
chr5 (158-240)||(19514932-19515015)
chr5 (158-240)||(34147479-34147562)
chr5 (159-240)||(3888631-3888713)
chr5 (158-232)||(22729010-22729084)
chr5 (159-240)||(30401885-30401967)
chr5 (158-240)||(37610587-37610669)
chr5 (159-240)||(41072183-41072264)
chr5 (169-240)||(25940535-25940606)
chr5 (159-240)||(11316717-11316799)
chr5 (158-240)||(34147143-34147224)
chr5 (158-232)||(18817588-18817663)
chr5 (158-232)||(37780719-37780794)
chr5 (159-231)||(11351405-11351478)
chr5 (153-232)||(18816949-18817029)
chr5 (159-240)||(11316943-11317025)
chr5 (159-233)||(31569910-31569984)
chr5 (158-232)||(11350810-11350884)
chr5 (158-232)||(42919307-42919381)
chr5 (153-207)||(16466744-16466799)
chr5 (153-211)||(22428931-22428989)
chr5 (153-211)||(22429194-22429252)
[»] chr3 (37 HSPs)
chr3 (158-240)||(40848523-40848605)
chr3 (158-240)||(42672980-42673062)
chr3 (158-240)||(42673265-42673347)
chr3 (158-240)||(48159899-48159982)
chr3 (158-240)||(24485429-24485511)
chr3 (158-240)||(36180558-36180639)
chr3 (163-240)||(3353520-3353597)
chr3 (158-230)||(3353130-3353202)
chr3 (156-240)||(22429565-22429649)
chr3 (158-240)||(40848930-40849013)
chr3 (158-240)||(48160302-48160385)
chr3 (159-232)||(27238877-27238951)
chr3 (153-240)||(27238462-27238550)
chr3 (158-240)||(10348768-10348851)
chr3 (158-240)||(53687890-53687973)
chr3 (158-232)||(26007184-26007258)
chr3 (158-240)||(53688272-53688354)
chr3 (159-240)||(53766166-53766248)
chr3 (159-240)||(24485025-24485106)
chr3 (158-240)||(22429160-22429243)
chr3 (158-240)||(47666304-47666387)
chr3 (158-240)||(42456164-42456245)
chr3 (152-240)||(36180959-36181048)
chr3 (158-240)||(10348481-10348564)
chr3 (159-240)||(26007588-26007670)
chr3 (158-240)||(44008370-44008452)
chr3 (158-240)||(44007969-44008052)
chr3 (158-232)||(21896488-21896562)
chr3 (158-232)||(8314015-8314090)
chr3 (152-218)||(42455786-42455853)
chr3 (153-231)||(47665908-47665987)
chr3 (158-219)||(53766569-53766631)
chr3 (159-224)||(1928419-1928484)
chr3 (153-205)||(8315086-8315138)
chr3 (158-205)||(47871126-47871173)
chr3 (158-205)||(1927774-1927822)
chr3 (158-205)||(20969023-20969071)
[»] scaffold0460 (2 HSPs)
scaffold0460 (158-240)||(332-415)
scaffold0460 (158-232)||(740-814)
[»] scaffold0017 (2 HSPs)
scaffold0017 (158-240)||(185243-185326)
scaffold0017 (158-232)||(184841-184916)
[»] scaffold0176 (2 HSPs)
scaffold0176 (158-240)||(19623-19705)
scaffold0176 (158-240)||(20012-20095)
[»] chr2 (38 HSPs)
chr2 (163-240)||(6324924-6325002)
chr2 (159-240)||(8851151-8851233)
chr2 (158-240)||(16911238-16911320)
chr2 (159-240)||(26692789-26692871)
chr2 (159-240)||(19141818-19141898)
chr2 (158-238)||(18750097-18750177)
chr2 (158-240)||(7664642-7664725)
chr2 (158-240)||(8851551-8851634)
chr2 (158-232)||(37720206-37720281)
chr2 (159-240)||(5793450-5793532)
chr2 (155-240)||(6325316-6325402)
chr2 (158-240)||(7664250-7664333)
chr2 (158-232)||(16910829-16910904)
chr2 (158-240)||(17850980-17851062)
chr2 (159-240)||(41790494-41790575)
chr2 (153-240)||(5378658-5378746)
chr2 (158-230)||(7979982-7980054)
chr2 (153-240)||(7979564-7979650)
chr2 (155-240)||(19141443-19141528)
chr2 (159-232)||(26692399-26692473)
chr2 (158-232)||(38490818-38490892)
chr2 (153-240)||(41790881-41790969)
chr2 (158-240)||(5379928-5380011)
chr2 (178-240)||(17851371-17851433)
chr2 (159-240)||(18749729-18749810)
chr2 (145-232)||(2639459-2639547)
chr2 (153-232)||(26841584-26841664)
chr2 (158-232)||(2638822-2638897)
chr2 (158-232)||(18296078-18296153)
chr2 (158-232)||(26842215-26842290)
chr2 (159-232)||(7591204-7591278)
chr2 (158-209)||(43495605-43495656)
chr2 (158-211)||(18296691-18296745)
chr2 (159-205)||(32673147-32673193)
chr2 (183-232)||(7591827-7591876)
chr2 (158-205)||(20347468-20347516)
chr2 (158-205)||(30190925-30190973)
chr2 (158-209)||(43495311-43495363)
[»] scaffold0069 (2 HSPs)
scaffold0069 (158-240)||(50475-50558)
scaffold0069 (158-238)||(50077-50156)
[»] scaffold0041 (2 HSPs)
scaffold0041 (158-240)||(38664-38747)
scaffold0041 (188-240)||(38284-38336)
[»] scaffold0029 (2 HSPs)
scaffold0029 (158-240)||(9907-9991)
scaffold0029 (152-217)||(10311-10375)
[»] scaffold0328 (2 HSPs)
scaffold0328 (158-232)||(6772-6847)
scaffold0328 (158-232)||(6154-6229)
[»] scaffold0110 (1 HSPs)
scaffold0110 (152-205)||(45811-45864)
[»] scaffold0376 (1 HSPs)
scaffold0376 (158-216)||(7457-7515)
[»] scaffold0319 (1 HSPs)
scaffold0319 (158-205)||(6701-6748)
[»] scaffold0802 (1 HSPs)
scaffold0802 (158-205)||(1424-1472)


Alignment Details
Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 29203753 - 29203645
Alignment:
Q  52 ccctttcccattaatctaaaaacaagatggccggtatgaataaatgtgtgtcacacattactactatg------tcatatagaatccaaatacttacgtg 145  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||    
T  29203753 ccctttcccattaatctaaaa-caagatgaccggtatgaataaatgtgtgtcacacattactactatgtctatatcatatagaatccaaatacttacgtg 29203655  T
Q  146 ttttgaatta 155  Q
    ||||||||||    
T  29203654 ttttgaatta 29203645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 27172118 - 27172200
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  27172118 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 27172200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 999115 - 999196
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  999115 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 999196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 999576 - 999494
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  999576 cttaattgcacttttccccctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctat 999494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 20480170 - 20480252
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  20480170 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20480252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 49317754 - 49317836
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||    
T  49317754 cttaattgcacttttccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctat 49317836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 49318217 - 49318135
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  49318217 cttaattgcactttcccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctat 49318135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 50526525 - 50526441
Alignment:
Q  157 acttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  50526525 acttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 50526441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 9347128 - 9347211
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  9347128 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 9347211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 48105168 - 48105085
Alignment:
Q  158 cttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  48105168 cttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48105085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 9347602 - 9347520
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||||||    
T  9347602 cttaattgcactttcccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctat 9347520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 50430132 - 50430050
Alignment:
Q  159 ttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 50430050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 50615672 - 50615590
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||| |||||||    
T  50615672 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 50615590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 50623500 - 50623418
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||| |||||||    
T  50623500 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 50623418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 20480663 - 20480591
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattt 230  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  20480663 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 13918448 - 13918531
Alignment:
Q  158 cttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  13918448 cttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13918531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 20371404 - 20371321
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgca-tcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  20371404 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctat 20371321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 26814696 - 26814779
Alignment:
Q  158 cttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  26814696 cttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26814779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 28633722 - 28633805
Alignment:
Q  158 cttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||||||||||| |||||||    
T  28633722 cttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 28633805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 32163095 - 32163020
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  32163095 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 32163020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 46823846 - 46823928
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctat 46823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 48104681 - 48104763
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48104763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 49318494 - 49318412
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||  |||||||    
T  49318494 cttaattgcatttttccccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctat 49318412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 6703946 - 6703871
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  6703946 cttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttg 6703871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 13918919 - 13918836
Alignment:
Q  158 cttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| | ||||||||||||||| |||||||| |||||||    
T  13918919 cttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctat 13918836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 26815171 - 26815088
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||  ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  26815171 cttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 46824330 - 46824247
Alignment:
Q  158 cttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| || ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||||||    
T  46824330 cttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctat 46824247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 4692485 - 4692411
Alignment:
Q  158 cttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgatttt 231  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  4692485 cttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgatttt 4692411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 28634208 - 28634126
Alignment:
Q  159 ttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||| |||||||| |||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctat 28634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 42611188 - 42611262
Alignment:
Q  159 ttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttg 42611262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 47498303 - 47498376
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  47498303 cttaattgcacttt-ccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttg 47498376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 44224169 - 44224088
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||| |||| | |||||| |||||| || |||||||||||||||||||||||||||||||||||| |||||||    
T  44224169 ttaattgcactttgccccatgtagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctat 44224088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 6703457 - 6703545
Alignment:
Q  153 ttagacttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| ||||||||||||||| || |||||||||| |||||| |||||||||||| | |||||||||||||||||||||||| |||||||    
T  6703457 ttaggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 6703545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 20371042 - 20371121
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccct 238  Q
    |||||||||||||| |||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||||||| |||||    
T  20371042 cttaattgcacttt-ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 20371121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 21687027 - 21687110
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||| ||||| ||  |||||||| |||||||||||||||||||||||||| |||||||    
T  21687027 cttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctat 21687110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 27172593 - 27172518
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||| | || |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  27172593 cttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttg 27172518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 42611665 - 42611583
Alignment:
Q  159 ttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||||||||||| |||||||||| |||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctat 42611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 21687518 - 21687445
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgatttt 231  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||| | | |||||||||||||||||||||||    
T  21687518 cttaatagcacttttccccctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttt 21687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 44911022 - 44911110
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||| ||||| |||| |||||||||| |||||||||||| ||||| |||| ||||||||||||||| |||||||    
T  44911022 ttaggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 44911110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 44911477 - 44911406
Alignment:
Q  169 ttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||||||| |||||||||||| || || |||| ||||||||||||||| |||||||    
T  44911477 ttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctat 44911406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 50949615 - 50949534
Alignment:
Q  160 taattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||| ||||| ||||||||| ||||| |||||||||||||| ||| |||| ||||||||||||||| |||||||    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctat 50949534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 19008807 - 19008719
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||||||||| ||||||||  ||||| |||||||||||| |||||||||| ||||| || |||||| |||||||    
T  19008807 ttaggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctat 19008719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 49284411 - 49284486
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  49284411 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 49284486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 50429658 - 50429741
Alignment:
Q  158 cttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||| |||||||||| | ||| ||||| |||| |||||||||||| | |||||||||||||||||||||||| |||||||    
T  50429658 cttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 50429741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 4692024 - 4692106
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||  || ||||||||||| |||| | ||||||||||||| ||||||| |||||||| |||||| |||||||    
T  4692024 cttaattgcactttctcctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctat 4692106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 19007737 - 19007796
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagtttt 217  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||  || ||||||||    
T  19007737 cttaattgcactttcccccctatagtttgccaattgtgcgattttgccccctatagtttt 19007796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 17518655 - 17518606
Alignment:
Q  156 gacttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  17518655 gacttaattgcacttttccccctatcttttgccaattgtgcgattttgca 17518606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 32162750 - 32162799
Alignment:
Q  176 cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagc 225  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  32162750 cctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagc 32162799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 47498546 - 47498493
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccat 211  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||    
T  47498546 cttaattgcacttttccccctatagtttgtcaattgtgcggttttgcaccccat 47498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 50949164 - 50949237
Alignment:
Q  159 ttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgatttt 231  Q
    ||||||| ||||||||| |||||||| |||||||| |||||||||||| | ||| |||| ||||||||||||||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 1176719 - 1176770
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatccc 209  Q
    |||||||||||||| ||||||||| ||||| |||| ||||||||||||||||    
T  1176719 cttaattgcactttcccccctatattttgctaattgtgcgattttgcatccc 1176770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 6002239 - 6002314
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||| ||||| || ||||||||| |||||  |||||||||||||||||||    
T  6002239 cttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttg 6002314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 39692052 - 39691977
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||  ||||||||| | |||||||    
T  39692052 cttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttg 39691977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 6002947 - 6002871
Alignment:
Q  157 acttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||  ||||||  |||  ||||| |||||||||||| |||||  |||||||||||||||||||    
T  6002947 acttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 6002871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 13589710 - 13589663
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||    
T  13589710 cttaattgcacttttccccctatcttttgctaattgtgcgattttgca 13589663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 50615242 - 50615289
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgc 204  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  50615242 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 50623070 - 50623117
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgc 204  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  50623070 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 8109045 - 8108991
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccat 211  Q
    |||||||||||||||||||| |||  |||||||||| |||||||||||| |||||    
T  8109045 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccat 8108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 48190773 - 48190827
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccat 211  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||    
T  48190773 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 48190827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 49285081 - 49285032
Alignment:
Q  183 tttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| |||||||||||| |||||  |||||||| ||||||||||    
T  49285081 tttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttg 49285032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 41082923 - 41082963
Alignment:
Q  169 ttttccccctatagtttgccaattatgcgattttgcatccc 209  Q
    ||||||||||||  |||||||||| ||||||||||||||||    
T  41082923 ttttccccctatcttttgccaattgtgcgattttgcatccc 41082963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 47955308 - 47955356
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  47955308 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 47955356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 48405964 - 48406046
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  48405964 cttaattgcacttttccccctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctat 48406046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 4239418 - 4239335
Alignment:
Q  158 cttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  4239418 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 4239335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 25161880 - 25161963
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  25161880 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 25161963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 28196825 - 28196742
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  28196825 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 28196742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 32703702 - 32703619
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  32703702 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 32703619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 292772 - 292866
Alignment:
Q  146 ttttgaattagacttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgaccccta 239  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||    
T  292772 tttttaattaggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgcccccta 292866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 28196341 - 28196431
Alignment:
Q  151 aattagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||| |||||||||||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  28196341 aattaggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 28196431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 9023241 - 9023329
Alignment:
Q  153 ttagacttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||    
T  9023241 ttaggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctat 9023329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 39744522 - 39744434
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  39744522 ttaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 39744434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 9380309 - 9380392
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||||    
T  9380309 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctat 9380392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 9380793 - 9380710
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||    
T  9380793 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctat 9380710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 43292409 - 43292326
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  43292409 cttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 43292326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 26207363 - 26207445
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||| |||||||    
T  26207363 cttaattgcactttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 26207445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 169015 - 169099
Alignment:
Q  158 cttaattgcacttttc--cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |||||||    
T  169015 cttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctat 169099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 169491 - 169408
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| ||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  169491 cttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 293269 - 293194
Alignment:
Q  158 cttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  293269 cttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 293194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 9023732 - 9023649
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||| |||||||    
T  9023732 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 9023649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 43292039 - 43292122
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||  ||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  43292039 cttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 43292122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 23539843 - 23539924
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||| |||||||    
T  23539843 cttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctat 23539924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 39744025 - 39744115
Alignment:
Q  151 aattagacttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||| ||||||||||||||| ||||||||||||| |||||| ||||||||| || |||||| ||||||||||||||||||| |||||||    
T  39744025 aattaggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctat 39744115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 44468962 - 44468892
Alignment:
Q  170 tttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||    
T  44468962 tttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 44468892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 12757770 - 12757851
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||| ||||||||  |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  12757770 ttaattgtacttttccttctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctat 12757851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 48406435 - 48406354
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||| ||||| ||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||    
T  48406435 ttaattgtactttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 48406354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 23540304 - 23540221
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||||||| || ||||||||||||||||||||||  |||||||    
T  23540304 cttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctat 23540221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 26207798 - 26207715
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||| |||| ||||||||||||||| |||||||    
T  26207798 cttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 26207715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 32703227 - 32703310
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| |||| |||||||||| ||||||| |||| ||| |||||||||||||||||||||| |||||||    
T  32703227 cttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctat 32703310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 39086675 - 39086592
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||||||| |  ||||||||||||||||||||||| |||||||    
T  39086675 cttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctat 39086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 39912538 - 39912464
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||| |||||||||  |||||||||  ||||| ||||||||||||||||||||||||||||||| |||||||    
T  39912538 cttaattacacttttccttctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttg 39912464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 12758254 - 12758173
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||   |||||||||||||||||||| | |||||||  |||||||||||||||||| |||||| |||||||    
T  12758254 ttaattgcactttttttcctatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctat 12758173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 50678781 - 50678856
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  50678781 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 50678856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 25162352 - 25162282
Alignment:
Q  170 tttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||| |||| ||||| || |||||||||  ||||||||||||||||||||||||| |||||||    
T  25162352 tttccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctat 25162282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 36096526 - 36096452
Alignment:
Q  159 ttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 36096452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 36095819 - 36095894
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  36095819 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 36095894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 50679476 - 50679401
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| | |||||||||| |||||  |||||||||||||||||||    
T  50679476 cttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttg 50679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 39912056 - 39912130
Alignment:
Q  158 cttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||||||| |||||||||||   |||| ||||||||| ||||| |||||||||||||| ||||||||    
T  39912056 cttaattgcacttttcctccctatagtttattaattgtgcgattttacatcc-atagttttaaacgaacgattttg 39912130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 43051304 - 43051229
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||||| |||||||  |||||||||| || ||||||||| |||||  |||||||||||||||||||    
T  43051304 cttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttg 43051229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 56505695 - 56505770
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||| |||  |||||||||| |||||||||||| |||||| ||||||  |||| ||||||    
T  56505695 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttg 56505770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 11241719 - 11241659
Alignment:
Q  151 aattagacttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccat 211  Q
    |||||| |||||||| ||||||||||||||  |||||||||| || ||||||||| |||||    
T  11241719 aattaggcttaattgtacttttccccctatcttttgccaattgtgggattttgcaccccat 11241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 3930531 - 3930484
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||    
T  3930531 cttaattgcacttttccccctatcttttgctaattgtgcgattttgca 3930484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 43050610 - 43050684
Alignment:
Q  159 ttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||  ||||||  ||| |||||| |||||||||||| |||||  ||||||||||| |||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttg 43050684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 45830253 - 45830173
Alignment:
Q  153 ttagacttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| |||||| ||||||||| |||||||  |||| ||||| ||||||||| || |||||  ||||||| |||||||||||    
T  45830253 ttaggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttg 45830173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 8e-30; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 6199155 - 6199065
Alignment:
Q  151 aattagacttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  6199155 aattaggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 6199065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 37396703 - 37396793
Alignment:
Q  151 aattagacttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||| ||||||||||||||||||| |||||||||||| ||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  37396703 aattaggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37396793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 24473820 - 24473737
Alignment:
Q  158 cttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  24473820 cttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 24473737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 41662523 - 41662606
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||    
T  41662523 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 41662606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 25439176 - 25439103
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  25439176 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 25439103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 37397197 - 37397114
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||| |||| |||||||    
T  37397197 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctat 37397114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 34498125 - 34498199
Alignment:
Q  159 ttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 34498199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 9623504 - 9623587
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| | | |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||| |||||||    
T  9623504 cttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctat 9623587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 17431289 - 17431372
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||| || | |||||||||||||||||||||||| |||||||    
T  17431289 cttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctat 17431372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 20861678 - 20861615
Alignment:
Q  169 ttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||    
T  20861678 ttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 20861615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 24473345 - 24473428
Alignment:
Q  158 cttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||| |||||| ||||||| ||||||||||| |||||||    
T  24473345 cttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctat 24473428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 13936725 - 13936799
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||||||  ||| |||||| |||||||||||| |||||| |||||||||||||||||||    
T  13936725 cttaattgcacttttccccctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttg 13936799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 15444698 - 15444616
Alignment:
Q  159 ttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| ||||||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||  |||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctat 15444616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 25438792 - 25438856
Alignment:
Q  156 gacttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaa 219  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  25438792 gacttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa 25438856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 34498612 - 34498524
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||||||| || |||| || |||||||    
T  34498612 ttaggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctat 34498524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 16169176 - 16169258
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||| | ||||||||||||||||| |||||  |||||||    
T  16169176 cttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctat 16169258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 6198655 - 6198743
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||||| ||| ||| || | |||||| |||||||||||| || ||||||||||||||||||||||| |||||||    
T  6198655 ttaggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 6198743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 9823413 - 9823338
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  9823413 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 9823338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 15444213 - 15444288
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| |||||||| |||||||||||||||| | | ||||| ||| |||||||||||||||||||||||||    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttg 15444288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 16169659 - 16169576
Alignment:
Q  158 cttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||| |||||||||||  ||||| ||| | ||||||||  ||||||||||||||||||||||| |||||||    
T  16169659 cttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctat 16169576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 39724100 - 39724025
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  39724100 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 39724025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 13027332 - 13027258
Alignment:
Q  159 ttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 13027258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 2856523 - 2856611
Alignment:
Q  153 ttagacttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||| | |||||| |||||||||||||||||| |||||||||||| |||||||||| |||||  |||||||  |||||||    
T  2856523 ttaggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctat 2856611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 13026632 - 13026712
Alignment:
Q  153 ttagacttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| |||||||||||||||| |||||||  |||||||||| |||||||||||| | |||  |||||||||||||||||||    
T  13026632 ttaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttg 13026712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 3307340 - 3307415
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||||| |||||||  |||| ||||| ||||||||||||||||||| |||||||| ||||||||||    
T  3307340 cttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttg 3307415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 33726694 - 33726756
Alignment:
Q  156 gacttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagtttt 217  Q
    ||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||| ||||||||    
T  33726694 gacttaattgcactttttccccctatagtttaccaattgtgcgattttgcctcctatagtttt 33726756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 33727136 - 33727074
Alignment:
Q  178 tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| |||| ||||||||||||   |||||||||||||||||||||||| |||||||    
T  33727136 tatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctat 33727074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 39723430 - 39723479
Alignment:
Q  183 tttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  39723430 tttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttg 39723479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 9822750 - 9822825
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||  ||||| |||||||||||| |||||  |||||||||||||||||||    
T  9822750 cttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 9822825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 15442761 - 15442840
Alignment:
Q  154 tagacttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||| |||| ||||||||| || ||||||| || ||||||||| |||||  ||||||||| |||||||||    
T  15442761 tagacttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttg 15442840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 22851392 - 22851467
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||| ||||| |||||||||||| |||||  |||||||| ||||||||||    
T  22851392 cttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttg 22851467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 6092779 - 6092852
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||||||||||||  |||| ||||| ||||||||||||||||||| ||||||  || ||||||||    
T  6092779 cttaattgca-ttttccccctatcttttgtcaattgtgcgattttgcatcccatatttttaattgaacgattttg 6092852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 9623933 - 9623864
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatccc--atagttttaaacgagc 225  Q
    ||||||||||||||||  ||||||||||||||||  || ||||||||| |||  ||||||||||||||||    
T  9623933 cttaattgcacttttcatcctatagtttgccaatcgtgtgattttgcaccccatatagttttaaacgagc 9623864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 13937441 - 13937366
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||| |||  |||| ||||| ||||| |||||| |||||  ||||||||||| |||||||    
T  13937441 cttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttg 13937366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 43162236 - 43162283
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||||||| ||||  |||| ||||||||||||    
T  43162236 cttaattgcacttttccccctatattttgttaattgtgcgattttgca 43162283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 765734 - 765784
Alignment:
Q  156 gacttaattgcactttt-ccccctatagtttgccaattatgcgattttgca 205  Q
    ||||||||||||||||| ||||||||  |||||||||| ||||||||||||    
T  765734 gacttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 765784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 7127660 - 7127706
Alignment:
Q  163 ttgcacttttccccctatagtttgccaattatgcgattttgcatccc 209  Q
    ||||||||||||||||||  ||||| |||| ||||||||||||||||    
T  7127660 ttgcacttttccccctatcttttgctaattgtgcgattttgcatccc 7127706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 15042148 - 15042222
Alignment:
Q  159 ttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||| |||||| ||  |||||||||| || ||||||||| || || |||||||| |||||||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttg 15042222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 12281126 - 12281174
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  12281126 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 12281174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 41662455 - 41662407
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  41662455 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 41662407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 13744284 - 13744202
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  13744284 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13744202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 9035345 - 9035262
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  9035345 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 9035262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 10533036 - 10533119
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  10533036 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10533119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 36527850 - 36527767
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36527850 cttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctat 36527767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 37888835 - 37888918
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  37888835 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37888918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 37889311 - 37889228
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  37889311 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37889228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 37972448 - 37972365
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  37972448 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37972365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 20418891 - 20418973
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20418973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 37971955 - 37972045
Alignment:
Q  151 aattagacttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  37971955 aattaggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37972045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 48359322 - 48359404
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||  |||||||    
T  48359322 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat 48359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 22740641 - 22740568
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 22740568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 20419376 - 20419293
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  20419376 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20419293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 22740158 - 22740241
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  22740158 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22740241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 29292924 - 29293007
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| |||||||    
T  29292924 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctat 29293007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 3204671 - 3204752
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||| |||||||    
T  3204671 cttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctat 3204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 18863970 - 18864052
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 18864052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 18864453 - 18864371
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||||| |||||||    
T  18864453 cttaattgtacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctat 18864371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 42419079 - 42418997
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgca-tcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||||||||||||||| |||||||    
T  42419079 ttaattgcacttttccccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctat 42418997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 3205145 - 3205062
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||| |||||||    
T  3205145 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctat 3205062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 13741559 - 13741642
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| |||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  13741559 cttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13741642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 17156969 - 17157052
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||| |||||||    
T  17156969 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 17157052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 48359707 - 48359627
Alignment:
Q  160 taattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||| | |||||||| ||||||||||||||| |||||||    
T  48359707 taattgcactttttcccctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctat 48359627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 42418593 - 42418676
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||| |||||||    
T  42418593 cttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctat 42418676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 9034864 - 9034953
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatccc-atagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||||||||| |||| |||||||||| ||||||| |||| ||| ||||||||||||||||||||||| |||||||    
T  9034864 ttaggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctat 9034953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 36527387 - 36527451
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacga 223  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  36527387 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacga 36527451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 29293398 - 29293315
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||  |||| |||| ||||||||||||||| |||||||    
T  29293398 cttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctat 29293315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 46816368 - 46816288
Alignment:
Q  153 ttagacttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| ||||||||||||||| ||| ||||  ||| ||||||||||||||||||| |||||| |||||||||||||||||||    
T  46816368 ttaggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttg 46816288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 38826965 - 38826882
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| ||||||||| ||||||||| ||||| |||||||||||| | ||||||||||||||| || ||||| |||||||    
T  38826965 cttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctat 38826882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 44599491 - 44599566
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  44599491 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 44599566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 44600187 - 44600112
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  44600187 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 44600112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 13863310 - 13863390
Alignment:
Q  153 ttagacttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| |||||||||| ||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  13863310 ttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 13863390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 13864008 - 13863934
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||| ||| |||||| |||||||||||||||||||    
T  13864008 cttaattgcacttttcacccctatcttttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttg 13863934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 16199029 - 16198967
Alignment:
Q  158 cttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaa 219  Q
    ||||||||||||||| ||| | |||||||||||||| |||||||||||| |||||||||||||    
T  16199029 cttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttttaa 16198967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 8643823 - 8643743
Alignment:
Q  153 ttagacttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| ||||||||||||||||  ||||||  ||| |||||| |||||||||||| |||||  | |||||||||||||||||    
T  8643823 ttaggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttg 8643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 27096049 - 27096099
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcc 208  Q
    |||||||||||||| ||||||||| ||||| |||| |||||||||| ||||    
T  27096049 cttaattgcactttcccccctatattttgctaattgtgcgattttgtatcc 27096099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 27096392 - 27096342
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatccc 209  Q
    ||||||||||||||||||||||  |||| ||||| || |||||||||||||    
T  27096392 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgcatccc 27096342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 27181911 - 27181961
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatccc 209  Q
    ||||||||||||||||||||||  |||| ||||| || |||||||||||||    
T  27181911 ttaattgcacttttccccctatcttttgtcaattgtgtgattttgcatccc 27181961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 27182254 - 27182204
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcc 208  Q
    |||||||||||||| ||||||||| ||||| |||| |||||||||| ||||    
T  27182254 cttaattgcactttcccccctatattttgctaattgtgcgattttgtatcc 27182204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 9412382 - 9412329
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    |||| |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  9412382 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 9412329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 3687708 - 3687660
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  3687708 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 3687660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 32734047 - 32733965
Alignment:
Q  159 ttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 32733965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 10087910 - 10087827
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  10087910 cttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10087827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 33974351 - 33974268
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  33974351 cttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 33974268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 22755141 - 22755058
Alignment:
Q  158 cttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  22755141 cttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctat 22755058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 22684409 - 22684327
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||||||||||| | |||||||| |||||||    
T  22684409 cttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctat 22684327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 22754659 - 22754741
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||||||||||| | |||||||| |||||||    
T  22754659 cttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctat 22754741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 29074423 - 29074341
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||  |||||||    
T  29074423 cttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29074341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 29079187 - 29079105
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||  |||||||    
T  29079187 cttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29079105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 29106996 - 29106914
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||  |||||||    
T  29106996 cttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29106914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 7654600 - 7654517
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||| || |||| |||||||    
T  7654600 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctat 7654517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 32733571 - 32733634
Alignment:
Q  169 ttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  32733571 ttttccctctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttg 32733634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 2354411 - 2354493
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| |||||||||||||||||  ||||| | |||||||||||||||| |||| ||||||||||||||  |||||||    
T  2354411 cttaattgcatttttccccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctat 2354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 33828992 - 33829067
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  33828992 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 33829067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 33829688 - 33829613
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  33829688 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 33829613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 13177107 - 13177033
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| ||||||||||||||||||||| || ||||| || |||||| || | ||||||||||||||||||||||||    
T  13177107 cttagttgcacttttccccctatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttg 13177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 13176624 - 13176704
Alignment:
Q  160 taattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||| |||||  |||||||||||||||||| | |||||||| |||||||  ||||||| ||||||||||| |||||||    
T  13176624 taattgcccttttttccctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctat 13176704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 2354862 - 2354779
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| |||||||  |||||||||| ||||| |||||||||||| ||||| |||| |||||||| |||||| |||||||    
T  2354862 cttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctat 2354779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 3825530 - 3825576
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||    
T  3825530 ttaattgcacttttccccctatattttgctaattgtgcgattttgca 3825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 13579707 - 13579655
Alignment:
Q  153 ttagacttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||| |||||||||||||||| |||||| |||||| |||| ||||||||||||    
T  13579707 ttaggcttaattgcacttttctccctatcgtttgctaattgtgcgattttgca 13579655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 31598778 - 31598726
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccat 211  Q
    ||||||||||||||||||||||  ||||  |||| ||||||||||||||||||    
T  31598778 ttaattgcacttttccccctatcttttgttaattgtgcgattttgcatcccat 31598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 10039678 - 10039725
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||    
T  10039678 cttaattgcacttttccccctatcttttgctaattgtgcgattttgca 10039725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 403650 - 403711
Alignment:
Q  157 acttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagtttta 218  Q
    |||||||||||||||    ||||||||||||||||| ||| |||||||| | ||||||||||    
T  403650 acttaattgcactttctttcctatagtttgccaattttgcaattttgcacctcatagtttta 403711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 22729491 - 22729409
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  22729491 cttaattgcacttttccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22729409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 37780322 - 37780404
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||    
T  37780322 cttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctat 37780404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 43463759 - 43463840
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 43463840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 12498564 - 12498652
Alignment:
Q  153 ttagacttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  12498564 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 12498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 26571221 - 26571133
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  26571221 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 25941066 - 25940983
Alignment:
Q  158 cttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25941066 cttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctat 25940983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 43464248 - 43464161
Alignment:
Q  153 ttagacttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||||| | |||||||||||||||||||||||| |||||||    
T  43464248 ttaggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 43464161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 2817152 - 2817234
Alignment:
Q  159 ttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctat 2817234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 12498987 - 12498897
Alignment:
Q  151 aattagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |||||||    
T  12498987 aattaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctat 12498897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 21207229 - 21207311
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 21207311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 37610204 - 37610278
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  37610204 cttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttg 37610278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 2817628 - 2817552
Alignment:
Q  156 gacttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||    
T  2817628 gacttaattgcacttttccccctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttg 2817552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 10098991 - 10098910
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||  |||||||    
T  10098991 ttaattgcacttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctat 10098910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 19514527 - 19514611
Alignment:
Q  158 cttaattgcacttttcccc--ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| ||||  |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  19514527 cttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 19514611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 26570725 - 26570814
Alignment:
Q  152 attagacttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||| ||||||| ||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  26570725 attaggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 26570814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 3888241 - 3888324
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||| ||||||| |||||||||||||||| | |||||||||| |||||||||||||||||||||||||| |||||||    
T  3888241 cttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 3888324  T

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Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 10098521 - 10098602
Alignment:
Q  158 cttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccct 238  Q
    ||||||||||||||| || ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  10098521 cttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccct 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 19515015 - 19514932
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||  |||||| |||||||    
T  19515015 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctat 19514932  T

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Target: chr5; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 34147562 - 34147479
Alignment:
Q  158 cttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||||| | | |||||||||||||||||||||| |||||||    
T  34147562 cttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctat 34147479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 3888713 - 3888631
Alignment:
Q  159 ttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||| || ||| |||||||||| | |||||||||| |||||||||||||||||||||||||| |||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 3888631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 22729010 - 22729084
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||   ||||||||||||||||||||||||    
T  22729010 cttaattgcacttttccccctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttg 22729084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 30401885 - 30401967
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| | |||||||||||||||| | | |||||||||||||||||||||||| |||||||||| |||||||    
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctat 30401967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 37610669 - 37610587
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||| ||||| ||||||||||||||| |||| |||||||||||| | ||| |||||||||||||||||||| |||||||    
T  37610669 cttaattgtactttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctat 37610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 41072264 - 41072183
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||| ||||||||| ||||||||||| ||||| | |||||||||| || ||||||||||||||||||||||| |||||||    
T  41072264 ttaattacacttttcctcctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctat 41072183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 25940535 - 25940606
Alignment:
Q  169 ttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| ||||||||||||| ||||| |||||||||||| || ||||||||||||||||||||||| |||||||    
T  25940535 tttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 25940606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 11316717 - 11316799
Alignment:
Q  159 ttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||| ||||||||||||||||| | | ||||||||||| ||| |||||||||||| |||||| |||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctat 11316799  T

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Target: chr5; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 34147143 - 34147224
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||  ||||||||  ||||| |||||||||||| ||| |||||||||||||||||||||| |||||||    
T  34147143 cttaattgcacttttccct-tatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctat 34147224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 18817663 - 18817588
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  18817663 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18817588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 37780794 - 37780719
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||| ||||||||||| |||||||||| |||| |||||||||||| | ||| ||||||||||||||||||||    
T  37780794 cttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttg 37780719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 11351478 - 11351405
Alignment:
Q  159 ttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgatttt 231  Q
    ||||||||||||||| | |||||  |||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 18816949 - 18817029
Alignment:
Q  153 ttagacttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| |||||||||| ||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  18816949 ttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18817029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 11317025 - 11316943
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||  || || || |||||||||| |||||||||||| ||||| |||||||| ||||||||||| |||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctat 11316943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 31569910 - 31569984
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttga 233  Q
    ||||||||||||||||||||||  |||| ||||| |||||||||||| | |||  ||||||||||| ||||||||    
T  31569910 ttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttga 31569984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 11350810 - 11350884
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||||| |||||||  |||||||||| ||| |||||||| |||||| |||||||||||||||||||    
T  11350810 cttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttg 11350884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 42919307 - 42919381
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||| ||||| |||||||| ||| |||||| ||||||||| || | |||  |||||||||||||||||||    
T  42919307 cttaattgctctttttcccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttg 42919381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 16466799 - 16466744
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatc 207  Q
    |||| |||||||||||||||||||| |||| ||||| |||| ||||||||||||||    
T  16466799 ttaggcttaattgcacttttcccccctatattttgctaattgtgcgattttgcatc 16466744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 22428931 - 22428989
Alignment:
Q  153 ttagacttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccat 211  Q
    |||| |||||||||||||| ||||||||  ||||| |||| |||||||||||| |||||    
T  22428931 ttaggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcaccccat 22428989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 22429252 - 22429194
Alignment:
Q  153 ttagacttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccat 211  Q
    |||| |||||||||| ||||||||||||  ||||| |||| |||||||||||| |||||    
T  22429252 ttaggcttaattgcatttttccccctatcttttgctaattgtgcgattttgcaccccat 22429194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 40848523 - 40848605
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||| |||||||    
T  40848523 cttaattgcacttttccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 40848605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 42672980 - 42673062
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||    
T  42672980 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctat 42673062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 42673347 - 42673265
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  42673347 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 42673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 48159899 - 48159982
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  48159899 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48159982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 24485511 - 24485429
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||    
T  24485511 cttaattgcacttttctccctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 24485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 36180558 - 36180639
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36180558 cttaattgcacatttcccc-tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctat 36180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 3353597 - 3353520
Alignment:
Q  163 ttgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||    
T  3353597 ttgcacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 3353520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 3353130 - 3353202
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattt 230  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  3353130 cttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt 3353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 22429649 - 22429565
Alignment:
Q  156 gacttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| || ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  22429649 gacttaattgcactttccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22429565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 40849013 - 40848930
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |||||||    
T  40849013 cttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctat 40848930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 48160385 - 48160302
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  48160385 cttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48160302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 27238951 - 27238877
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 27238877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 27238462 - 27238550
Alignment:
Q  153 ttagacttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||| ||||||||| ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||    
T  27238462 ttaggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 27238550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 10348851 - 10348768
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| || | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  10348851 cttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10348768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 53687890 - 53687973
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||  |||||||    
T  53687890 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat 53687973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 26007184 - 26007258
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  26007184 cttaattgcattttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26007258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 53688354 - 53688272
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||| |||||||    
T  53688354 cttaattgcactttctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctat 53688272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 53766166 - 53766248
Alignment:
Q  159 ttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| || ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 53766248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 24485025 - 24485106
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||| || |||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | |||||||    
T  24485025 ttaattacatttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctat 24485106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 22429160 - 22429243
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| |||||||| |||||||||| ||||| |||||| || ||||||||||||||||||||||| |||||||    
T  22429160 cttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctat 22429243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 47666387 - 47666304
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||| ||||| |||| ||||||||||||||| |||||||    
T  47666387 cttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctat 47666304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 42456245 - 42456164
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| ||||||| ||||  |||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  42456245 cttaattgcacttt-ccccctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 42456164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 36181048 - 36180959
Alignment:
Q  152 attagacttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||| ||||||||||||||||| ||||||||||||  |||| |||||||||| | |||||||||||||||||||||||||  |||||||    
T  36181048 attaggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctat 36180959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 10348481 - 10348564
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||| ||| ||||||||| ||||| | | ||||||||||||||| ||||||||||||||||||| |||||||    
T  10348481 cttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctat 10348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 26007670 - 26007588
Alignment:
Q  159 ttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||   |||| ||||||||||||||||||| |||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctat 26007588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 44008452 - 44008370
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||  ||||||||||||||||| ||| |||||||| | ||||||||||||||||| |||||  |||||||    
T  44008452 cttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctat 44008370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 44007969 - 44008052
Alignment:
Q  158 cttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||| |||||||||||  ||||| ||| | ||||||||  ||||||||||||||||||||||| |||||||    
T  44007969 cttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctat 44008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 21896562 - 21896488
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| |||| |||||||| |||| ||||| |||||||||||| ||||| |||||| |||||||||||||    
T  21896562 cttaattgcattttttcccctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttg 21896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 8314015 - 8314090
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| |||||||| |||| ||||| |||||||||||| || ||  ||||||||| |||||||||    
T  8314015 cttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttg 8314090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 42455786 - 42455853
Alignment:
Q  152 attagacttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagtttta 218  Q
    ||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||  || |||||||||    
T  42455786 attaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccccctatagtttta 42455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 47665908 - 47665987
Alignment:
Q  153 ttagacttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgatttt 231  Q
    |||| ||||||||||||||| ||||| |||||||| ||||| |||||||||||| | ||| |||| ||||||| ||||||    
T  47665908 ttaggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgatttt 47665987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 53766631 - 53766569
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaa 219  Q
    |||||||||||||||||||| |||||||||| |||| ||| |||||||| || ||||||||||    
T  53766631 cttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa 53766569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 1928484 - 1928419
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgag 224  Q
    ||||||||| ||| | ||||||  |||||||||| |||||||||||| |||||| |||||||||||    
T  1928484 ttaattgcattttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgag 1928419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 8315138 - 8315086
Alignment:
Q  153 ttagacttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||| |||||||||||||| ||||||||| |||| ||||| ||||||||||||    
T  8315138 ttaggcttaattgcactttcccccctatattttgtcaattgtgcgattttgca 8315086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 47871173 - 47871126
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||    
T  47871173 cttaattgcacttttccccctatcttttgctaattgtgcgattttgca 47871126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 1927774 - 1927822
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    ||||||||||| |||||||| |||  |||||||||||||||||||||||    
T  1927774 cttaattgcacctttcccccctatcttttgccaattatgcgattttgca 1927822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 20969071 - 20969023
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  20969071 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 20969023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 332 - 415
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  332 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 814 - 740
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  814 cttaattgcactttttcccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttg 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 185326 - 185243
Alignment:
Q  158 cttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  185326 cttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 185243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 184841 - 184916
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| || |||||||||| ||| | ||| |||||||| ||||||||||||||||||||||||||    
T  184841 cttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttg 184916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 19623 - 19705
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  19623 cttaattgcaattttccccatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 19705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 20095 - 20012
Alignment:
Q  158 cttaattgcacttttccccct-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||  |||||||||||||||   |||||||| |||||||    
T  20095 cttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctat 20012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 6324924 - 6325002
Alignment:
Q  163 ttgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctat 6325002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 8851151 - 8851233
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 8851233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 16911320 - 16911238
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  16911320 cttaattgcactttcgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 16911238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 26692871 - 26692789
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26692789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 19141898 - 19141818
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  19141898 ttaattgcacttt-ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctat 19141818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 18750177 - 18750097
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccct 238  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  18750177 cttaattgcacttctccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 18750097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 7664725 - 7664642
Alignment:
Q  158 cttaattgcacttttcc-ccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  7664725 cttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 8851634 - 8851551
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  8851634 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 8851551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 37720206 - 37720281
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  37720206 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 37720281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 5793450 - 5793532
Alignment:
Q  159 ttaattgcacttttcccccta-tagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctat 5793532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 6325402 - 6325316
Alignment:
Q  155 agacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||| | |||||| ||||||||||||||||| |||||||    
T  6325402 agacttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctat 6325316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 7664250 - 7664333
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  7664250 cttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7664333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 16910829 - 16910904
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  16910829 cttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 16910904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 17850980 - 17851062
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| |||||||||||||| |||||||    
T  17850980 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgccccctat 17851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 41790494 - 41790575
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||| ||||| |||| ||||||||||||||| |||||||    
T  41790494 ttaattgcatttttccccctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 41790575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 5378658 - 5378746
Alignment:
Q  153 ttagacttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||||||| ||| |||||| ||||| ||||||||| |||||||    
T  5378658 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctat 5378746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 7980054 - 7979982
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattt 230  Q
    ||||||||||||||| || ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  7980054 cttaattgcactttttcctctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgattt 7979982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 7979564 - 7979650
Alignment:
Q  153 ttagacttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| ||| ||||||||||||||  ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  7979564 ttaggctttattgcacttttccct-tatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7979650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 19141443 - 19141528
Alignment:
Q  155 agacttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||  |||||||    
T  19141443 agacttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctat 19141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 26692399 - 26692473
Alignment:
Q  159 ttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||| ||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26692473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 38490892 - 38490818
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  38490892 cttaattgcactttcctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttg 38490818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 41790969 - 41790881
Alignment:
Q  153 ttagacttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||| |||||||||||||||||||| |||| |||||||||| |||||||||||  ||||| |||| ||||||||||||||| |||||||    
T  41790969 ttaggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctat 41790881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 5380011 - 5379928
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||| ||| |||||| ||||| ||||||||| |||||||    
T  5380011 cttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctat 5379928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 17851433 - 17851371
Alignment:
Q  178 tatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||||||||| |||||||    
T  17851433 tatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 17851371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 18749729 - 18749810
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    |||||||||||||| | ||| ||||||| |||||||| ||||||||| |||||||||||||||||  ||||||| |||||||    
T  18749729 ttaattgcacttttactcctctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctat 18749810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 2639547 - 2639459
Alignment:
Q  145 gttttgaattagacttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||  ||| |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  2639547 gttttgatataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 2639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 26841584 - 26841664
Alignment:
Q  153 ttagacttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  26841584 ttaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 26841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 2638822 - 2638897
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||||| |||||||  |||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  2638822 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttg 2638897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 18296078 - 18296153
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||| ||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  18296078 cttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18296153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 26842290 - 26842215
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||| |||||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  26842290 cttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 26842215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 7591204 - 7591278
Alignment:
Q  159 ttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    ||||||| ||||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 7591278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 43495656 - 43495605
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatccc 209  Q
    |||||||||||||| || |||||| ||||| |||| ||||||||||||||||    
T  43495656 cttaattgcactttcccacctatattttgctaattgtgcgattttgcatccc 43495605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 18296745 - 18296691
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccat 211  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||| |||||    
T  18296745 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccat 18296691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 32673193 - 32673147
Alignment:
Q  159 ttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||| |||||||  |||||||||| ||||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgca 32673147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 7591876 - 7591827
Alignment:
Q  183 tttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||| ||||| |||||||||||| |||||  |||||||||||||||||||    
T  7591876 tttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 7591827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 20347516 - 20347468
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  20347516 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 20347468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 30190925 - 30190973
Alignment:
Q  158 cttaattgcacttttccccc-tatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||||||    
T  30190925 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 30190973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 43495311 - 43495363
Alignment:
Q  158 cttaattgcacttttccc-cctatagtttgccaattatgcgattttgcatccc 209  Q
    |||||||||||||||||| |||||| ||||| |||| ||||||||| ||||||    
T  43495311 cttaattgcacttttcccacctatattttgctaattgtgcgatttttcatccc 43495363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 50558 - 50475
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgca-tcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  50558 cttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctat 50475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 50077 - 50156
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccct 238  Q
    |||||||||||||| |||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||||||| |||||    
T  50077 cttaattgcacttt-ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 50156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 38747 - 38664
Alignment:
Q  158 cttaattgcactttt-ccccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||| |||||||    
T  38747 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctat 38664  T

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Target: scaffold0041; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 38284 - 38336
Alignment:
Q  188 caattatgcgattttgcatcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctat 38336  T

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Target: scaffold0029 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 9907 - 9991
Alignment:
Q  158 cttaattgcactttt-ccccctatagtttgccaattatgcgattttgca-tcccatagttttaaacgagcgattttgacccctat 240  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| ||  |||||||||||||||||||||||||| |||||||    
T  9907 cttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctat 9991  T

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Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 10375 - 10311
Alignment:
Q  152 attagacttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagtttt 217  Q
    ||||| |||||| |||||||||||| ||||||||||||||| | |||||||||| || ||||||||    
T  10375 attaggcttaatagcacttttcccc-tatagtttgccaattgtccgattttgcaccctatagtttt 10311  T

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Target: scaffold0328 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 6847 - 6772
Alignment:
Q  158 cttaattgcacttttc-cccctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||| ||||| |||||||  |||||||||| |||||||||||| |||||  |||||||||||||||||||    
T  6847 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 6772  T

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Target: scaffold0328; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 6154 - 6229
Alignment:
Q  158 cttaattgcacttttcccc-ctatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttg 232  Q
    |||||||||||||||| || ||||  ||||| |||| ||||||||| || |||||| ||||||| |||||||||||    
T  6154 cttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttg 6229  T

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Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 45864 - 45811
Alignment:
Q  152 attagacttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    ||||| |||||||||||||||||||||||  |||||||||| ||||||||||||    
T  45864 attaggcttaattgcacttttccccctatcttttgccaattgtgcgattttgca 45811  T

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Target: scaffold0376 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 7457 - 7515
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgcatcccatagttt 216  Q
    ||||||||||||||| |||||||  ||||| ||||||||||||||||| ||||| ||||    
T  7457 cttaattgcactttttcccctatcttttgctaattatgcgattttgcaccccatcgttt 7515  T

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Target: scaffold0319 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 6748 - 6701
Alignment:
Q  158 cttaattgcacttttccccctatagtttgccaattatgcgattttgca 205  Q
    |||||||||||||||||||||||  ||||| |||| ||||||||||||    
T  6748 cttaattgcacttttccccctatcttttgctaattgtgcgattttgca 6701  T

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Target: scaffold0802 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 1472 - 1424
Alignment:
Q  158 cttaattgcactttt-ccccctatagtttgccaattatgcgattttgca 205  Q
    ||||||||||||||| ||||||||  |||||||||| ||||||||||||    
T  1472 cttaattgcactttttccccctatcttttgccaattgtgcgattttgca 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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