View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0563_high_3 (Length: 320)
Name: NF0563_high_3
Description: NF0563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0563_high_3 |
 | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
| [»] scaffold0811 (1 HSPs) |
| | |
|
| [»] scaffold0764 (1 HSPs) |
| | |
|
| [»] scaffold0313 (2 HSPs) |
| | |
|
| [»] scaffold0535 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0059 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 69 - 309
Target Start/End: Original strand, 40472 - 40712
Alignment:
| Q |
69 |
ttgtactatgaagattgttcttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgga |
168 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||||||||||||| |
|
|
| T |
40472 |
ttgtactatgaagattgttcttgtacgacttcagaatgttgttggatcagatcttctttgaaatatgtcttggaacctgtgcaagatctcataaagtgga |
40571 |
T |
|
| Q |
169 |
actctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgct |
268 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
40572 |
actgtcacttcaagtccatgcttttggggatttggttagctttgtacaataccaactcccttatgtgtcgaattcctattgaataagacttgatcttgct |
40671 |
T |
|
| Q |
269 |
tttagatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
40672 |
tttagatttgttttttactttccaaccactgtactgttcat |
40712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 69 - 309
Target Start/End: Original strand, 15475345 - 15475585
Alignment:
| Q |
69 |
ttgtactatgaagattgttcttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgga |
168 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| |
|
|
| T |
15475345 |
ttgtactatgaagattgttcttgtacgacttcagaatgttgttggatcatatcttctttgaaatatgtcttggaacatgtgcaggatatcataaagtgga |
15475444 |
T |
|
| Q |
169 |
actctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgct |
268 |
Q |
| |
|
||| ||| |||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
15475445 |
actgtcaattcaagtccatgctttaggggatttggttagatttgtatagtaccaactcccttatttgtcgaattcctgttgaataagacttgatcttgct |
15475544 |
T |
|
| Q |
269 |
tttagatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||| ||||| |
|
|
| T |
15475545 |
tttagatttgctttttactttccaaccactgtactattcat |
15475585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 89 - 309
Target Start/End: Original strand, 22908683 - 22908904
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttcttt-gaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccat |
187 |
Q |
| |
|
||||||||||||||||| |||| |||| ||||||||| ||||||||||| || | ||||| ||||||||||||||| || |||||||| ||||| |
|
|
| T |
22908683 |
ttgtacgacttcagaataatgttagatcagatcttcttttgaaatttgtctacgagcgcgtgcatgatctcataaagtggtgctatcacttcacttccat |
22908782 |
T |
|
| Q |
188 |
gctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcact |
287 |
Q |
| |
|
| ||| |||||||||||| ||||||| |||||||||| |||||||||||||| || | |||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
22908783 |
gttttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgaaatcttgttgaatcagacttgatcttgcttttagatttgttttttact |
22908882 |
T |
|
| Q |
288 |
ttccaaccactgtactgttcat |
309 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22908883 |
ttccaaccactgtactgttcat |
22908904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 90 - 309
Target Start/End: Complemental strand, 22902251 - 22902032
Alignment:
| Q |
90 |
tgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatgc |
189 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||| |||||| ||||| ||| | ||||||||||||||||||||| | |||||||| |||||| |
|
|
| T |
22902251 |
tgtacgacttcagaatgttgttagatcagatcttctatgaaatctgtctaggagcgcgtgcaggatctcataaagtggtgttgtcacttcatttccatga |
22902152 |
T |
|
| Q |
190 |
tttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcacttt |
289 |
Q |
| |
|
||| |||||||||| ||||||| ||||||||| | ||||||||||| || || | |||||| |||||||||||||||||| |||||| |||| ||||| |
|
|
| T |
22902151 |
tttacaggatttggtttgctttgtatagtaccaattcccttatgtgtcaaaatcttgttgaatcagacttgatcttgcttttggatttgctttttacttt |
22902052 |
T |
|
| Q |
290 |
ccaaccactgtactgttcat |
309 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
22902051 |
ccaaccattgtactgttcat |
22902032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 119 - 309
Target Start/End: Complemental strand, 19342421 - 19342231
Alignment:
| Q |
119 |
atcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatgctttgggggatttggttagctttgtttagt |
218 |
Q |
| |
|
|||||||||||||||||| | ||| | ||||||||||||||||||||| || |||||||| |||||||||| |||||||||||| |||||| ||| |
|
|
| T |
19342421 |
atcttctttgaaatttgtttaggagcgcgtgcaggatctcataaagtggtgctgtcacttcacttccatgctttaggggatttggtttactttgtacagt |
19342322 |
T |
|
| Q |
219 |
accaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
||||||| | ||||||||| || || | |||||| |||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
19342321 |
accaactcctttatgtgtccaaatcttgttgaatcagacttgatcttgcttttggatttgctttttactttccaaccactgtactgttcat |
19342231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 92 - 309
Target Start/End: Complemental strand, 23722078 - 23721861
Alignment:
| Q |
92 |
tacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatgctt |
191 |
Q |
| |
|
||||||| |||||||||||| |||| ||||||| |||||| ||||| ||| | ||||| ||||||||||||||| | | |||||| ||||||||| |
|
|
| T |
23722078 |
tacgactacagaatgttgttagatcagatcttctatgaaatctgtctaggagcgcgtgcatgatctcataaagtggtgatgttacttcacttccatgctt |
23721979 |
T |
|
| Q |
192 |
tgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactttcc |
291 |
Q |
| |
|
|||||||||||| |||||| ||| |||||| |||||||||||||| || | |||||| ||||||||| || |||| |||||| |||| ||||||| |
|
|
| T |
23721978 |
gaggggatttggtttactttgtacagtgccaactcccttatgtgtcgaaatcttgttgaatcagacttgattttactttaggatttgctttttactttcc |
23721879 |
T |
|
| Q |
292 |
aaccactgtactgttcat |
309 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
23721878 |
aaccactgtactgttcat |
23721861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 27159819 - 27159982
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || | || |||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||| |
|
|
| T |
27159819 |
tgaagattgttcttggacatacttcagaatgttcctgtagcagatcttctttgaaatctgtcttggaacgcgtgcaggatatcataaagtggtgctgtca |
27159918 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||| |||||||||| ||||||||||||| |
|
|
| T |
27159919 |
cttcacttccatgctttaggggatttggtttactttgtacagtaccaactcccttatgtgtcga |
27159982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 27170188 - 27170351
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || | || |||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||| |
|
|
| T |
27170188 |
tgaagattgttcttggacatacttcagaatgttcctgtagcagatcttctttgaaatctgtcttggaacgcgtgcaggatatcataaagtggtgctgtca |
27170287 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||||| |||||||||| ||||||||||||| |
|
|
| T |
27170288 |
cttcacttccatgctttaggggatttggtttactttgtacagtaccaactcccttatgtgtcga |
27170351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 138; Significance: 4e-72; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 69 - 309
Target Start/End: Complemental strand, 41526284 - 41526044
Alignment:
| Q |
69 |
ttgtactatgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgg |
167 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||||||||||||| || ||| || ||||||||||| ||||||| ||||||||||| || | ||||||||| |
|
|
| T |
41526284 |
ttgtactatgaagattattcttggacgtacttcagaatgttcctgggtcagattttctttgaaatctgtcttgaaactagtgcagaat-tgataaagtgg |
41526186 |
T |
|
| Q |
168 |
aactctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgc |
267 |
Q |
| |
|
|||| |||||||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41526185 |
aactgtcacttcaagcccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgaattcctgttgaataagacttgatcttgc |
41526086 |
T |
|
| Q |
268 |
ttttagatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
41526085 |
ttttagatttgctttttactttccaaccactgtactgttcat |
41526044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 34 - 309
Target Start/End: Complemental strand, 30651787 - 30651509
Alignment:
| Q |
34 |
tgggttttatcagat--atgtcaaatgaatttgcagattgtactatgaagattgttcttgtacgacttcagaatgttgttgaatcatatcttctttgaaa |
131 |
Q |
| |
|
|||| |||||||||| |||||| |||||||| || |||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||| |
|
|
| T |
30651787 |
tgggctttatcagatgaatgtcacatgaatttctaggttgtactatgaagattgttcttgtacgatttcagaatgttgttaggtcagatcttctttgaaa |
30651688 |
T |
|
| Q |
132 |
tttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttcctta |
231 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||| | |||||||| |||||||||| |||||||||||| | ||||| |||||||||| ||||| |
|
|
| T |
30651687 |
tctgtcttggaacatgtgcaggatctcataaagtggagttgtcacttcacttccatgctttaggggatttggtttggtttgtacagtaccaactccctta |
30651588 |
T |
|
| Q |
232 |
tgtgtcgaattcctcttgaataagacttgatcttgcttttag-atttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||| | |||| |||| |||||||| | |||||||||||||| |
|
|
| T |
30651587 |
tgtgtcgaattcctgttgaatcagacttgatcttgctttttgcttttgctttttactttccaccaactgtactgttcat |
30651509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 69 - 271
Target Start/End: Complemental strand, 16058440 - 16058238
Alignment:
| Q |
69 |
ttgtactatgaagattgttcttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgga |
168 |
Q |
| |
|
||||||||||||||||||| ||||||||||| | ||||||||| |||| || || |||||||| ||||||||||| |||||||||||||||||||| | |
|
|
| T |
16058440 |
ttgtactatgaagattgtttttgtacgactttataatgttgttagatcagatgttatttgaaatctgtcttggaacatgtgcaggatctcataaagtgta |
16058341 |
T |
|
| Q |
169 |
actctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgct |
268 |
Q |
| |
|
|| |||||||| |||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
16058340 |
gctgtcacttcacttccatgctttaagggatttggtttgctttgtacagtaccaactcccttatgtgtcgaattcctgttgaatcagacttgatcttgct |
16058241 |
T |
|
| Q |
269 |
ttt |
271 |
Q |
| |
|
||| |
|
|
| T |
16058240 |
ttt |
16058238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 522105 - 522337
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| || ||| |
|
|
| T |
522105 |
tgaagattgttcttggacgtacttcagaatgttcatggatcagatcttctttgaaatctgtcttggaactagtgcagaatctcataaagtggagctgtca |
522204 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| | |
|
|
| T |
522205 |
cttcactaccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgact |
522304 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| |
|
|
| T |
522305 |
ttgccttttgctttccaaccactgtactgttca |
522337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 89 - 308
Target Start/End: Original strand, 17421222 - 17421441
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||||||||||| | | || |||||||||||||| ||||||||| | |||||||||||||||||||||| || |||||||| |||||| |
|
|
| T |
17421222 |
ttgtacgacttcagaatgttgatagaacagatcttctttgaaatctgtcttggagcgcgtgcaggatctcataaagtggagctgtcacttcacttccatg |
17421321 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactt |
288 |
Q |
| |
|
|||| |||||||||||| ||||||| |||||||||| |||| |||||||| || | |||||| ||| ||||||||||||| |||| ||| ||| |
|
|
| T |
17421322 |
ctttaggggatttggtttgctttgtacagtaccaactcccttttgtgtcgagatcttgttgaatcagatctgatcttgcttttgactttgccttttgctt |
17421421 |
T |
|
| Q |
289 |
tccaaccactgtactgttca |
308 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
17421422 |
tccaaccattgtactgttca |
17421441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 308
Target Start/End: Complemental strand, 26458501 - 26458297
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||||| ||||| ||| | ||||||||||||||||||||| | |||||| |
|
|
| T |
26458501 |
ttgtacgacttcagaatgttgttagatcagatcttctttgaaatctgtctaggagcgcgtgcaggatctcataaagtggtgttgtcactt---------- |
26458412 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactt |
288 |
Q |
| |
|
|||||||||||| |||||| |||||||||| ||||||||||||| || | |||||| |||| ||||||||||||| ||||| ||| ||| |
|
|
| T |
26458411 |
-----ggggatttggttttctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagacctgatcttgcttttgactttgtcttttgctt |
26458317 |
T |
|
| Q |
289 |
tccaaccactgtactgttca |
308 |
Q |
| |
|
||||||||||||| |||||| |
|
|
| T |
26458316 |
tccaaccactgtattgttca |
26458297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0811 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0811
Description:
Target: scaffold0811; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 77 - 309
Target Start/End: Original strand, 3421 - 3654
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| || || |||||||||||||||| | ||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
3421 |
tgaagattgttcttggacgtacttcagaatgttcctggattatatcttctttgaaatctttcttggaactagtgcaggatctcataaagtggagctgtca |
3520 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||||| ||||||||| |||||||||||| |||||| |||||||||| ||||||| ||||||||| | || || |||||||||||||||||||||| |
|
|
| T |
3521 |
cttcaagcccatgctttaggggatttggttttctttgtacagtaccaactcccttatgggtcgaattcatgttaaaccagacttgatcttgcttttagat |
3620 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
||| |||| |||||||||||||| |||||||||| |
|
|
| T |
3621 |
ttgctttttactttccaaccactatactgttcat |
3654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 96 - 309
Target Start/End: Original strand, 15988576 - 15988789
Alignment:
| Q |
96 |
acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatgctttggg |
195 |
Q |
| |
|
||||||||||||| || |||| |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| || |
|
|
| T |
15988576 |
acttcagaatgtttctggatcagatcttctttgaaatctgtcttggaactagtgcaggatctcataaagtggtgatgtcacttcaagcccatgctttagg |
15988675 |
T |
|
| Q |
196 |
ggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactttccaacc |
295 |
Q |
| |
|
|||||||||| ||||||| |||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
15988676 |
ggatttggtttgctttgtacagtaccaactcccttatgtgtcgaattaatgttgaaccagacttgatcttgcttttagatttggtttttactttccaacc |
15988775 |
T |
|
| Q |
296 |
actgtactgttcat |
309 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
15988776 |
actatactgttcat |
15988789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 5615383 - 5615615
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| |||||||||| || ||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
5615383 |
tgaagattgttcttggacgtacttcagaattttcttggatcagatcttctttgaaatctgtcttggaactagtgcagaatctcataaagtggagttttca |
5615482 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| | |
|
|
| T |
5615483 |
cttcactaccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgact |
5615582 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| |
|
|
| T |
5615583 |
ttgccttttgctttccaaccactgtactgttca |
5615615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 89 - 309
Target Start/End: Complemental strand, 42595525 - 42595305
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||||||| | |||||||| ||| || |
|
|
| T |
42595525 |
ttgtacgacttcagaatgttgttagatcatatcttctttgaaatttgtctaggagcgcgtgcaggatctcataaagtggtgttgtcacttcatttccttg |
42595426 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactt |
288 |
Q |
| |
|
|||| |||||||||||| ||||||| |||||||||| |||||||||||||| || | |||||| ||| |||||||||||||| |||| ||| |||| |
|
|
| T |
42595425 |
ctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgaaatcttgttgaatcagaattgatcttgcttttgactttgccttttactt |
42595326 |
T |
|
| Q |
289 |
tccaaccactgtactgttcat |
309 |
Q |
| |
|
||| ||| |||||||||||| |
|
|
| T |
42595325 |
tcctcccattgtactgttcat |
42595305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 89 - 309
Target Start/End: Original strand, 12827259 - 12827479
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||||||||||||| || | |||||||||||||| ||||| ||| | |||| ||||||||||||||| | |||||||| |||||| |
|
|
| T |
12827259 |
ttgtacgacttcagaatgttgttagattagatcttctttgaaatctgtctaggagcgcatgcatgatctcataaagtggtgttgtcacttcacttccatg |
12827358 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactt |
288 |
Q |
| |
|
|||| |||||||||||| ||||||| ||||| |||| |||||||||||||| || | |||||| ||| |||||||||||||| |||||| |||| |||| |
|
|
| T |
12827359 |
ctttaggggatttggtttgctttgtacagtacaaactcccttatgtgtcgaaatcttgttgaatcagatttgatcttgcttttggatttgctttttactt |
12827458 |
T |
|
| Q |
289 |
tccaaccactgtactgttcat |
309 |
Q |
| |
|
|||||| | |||||||||||| |
|
|
| T |
12827459 |
tccaactattgtactgttcat |
12827479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 93 - 309
Target Start/End: Complemental strand, 41027708 - 41027492
Alignment:
| Q |
93 |
acgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatgcttt |
192 |
Q |
| |
|
||||||| ||||||||||| || | ||||||||||||| ||||| ||| | ||||||||||||||||||||| | ||||||| |||||||||| |
|
|
| T |
41027708 |
acgactttagaatgttgttagattagatcttctttgaaacctgtctaggagcgcgtgcaggatctcataaagtggtgatgtcacttcccttccatgcttt |
41027609 |
T |
|
| Q |
193 |
gggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactttcca |
292 |
Q |
| |
|
|||||||||||| ||||||| | | | |||| |||||||| ||||| || | |||||| |||||||||||||||||| |||||| |||| |||||||| |
|
|
| T |
41027608 |
aggggatttggtttgctttgtacatttcaaactcccttatgtatcgaaatcttgttgaatcagacttgatcttgcttttggatttgctttttactttcca |
41027509 |
T |
|
| Q |
293 |
accactgtactgttcat |
309 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
41027508 |
accactgtactgttcat |
41027492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 308
Target Start/End: Complemental strand, 31824890 - 31824671
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||||||||||| | | || |||||||||||||| ||||||||| | |||||||||||||||||||||| || |||||||| |||||| |
|
|
| T |
31824890 |
ttgtacgacttcagaatgttgatagaacagatcttctttgaaatatgtcttggagcgcgtgcaggatctcataaagtggagctgtcacttcacttccatg |
31824791 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactt |
288 |
Q |
| |
|
|||| || ||||||||| ||||||| |||||||||| ||||||||||||| || | ||| || ||| ||||||||| ||| |||| ||| ||| |
|
|
| T |
31824790 |
ctttaggagatttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttggatcagatctgatcttgcctttgactttgccttttgctt |
31824691 |
T |
|
| Q |
289 |
tccaaccactgtactgttca |
308 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
31824690 |
tccaaccactgtactgttca |
31824671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 309
Target Start/End: Original strand, 13285684 - 13285904
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||| |||||| || |||| |||||||||||||| ||||| ||||| ||||||||||||||||||||| | |||||||| |||||| |
|
|
| T |
13285684 |
ttgtacgacttcataatgttattagatcagatcttctttgaaatctgtctaggaacacgtgcaggatctcataaagtggtgttgtcacttcacttccatg |
13285783 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactt |
288 |
Q |
| |
|
|||| |||||||||||| ||||||| |||||||||| |||||||||||||| || | |||||| ||| | |||||| ||||| |||| ||| |||| |
|
|
| T |
13285784 |
ctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgaaatcttgttgaatcagattagatctttcttttgactttgccttttactt |
13285883 |
T |
|
| Q |
289 |
tccaaccactgtactgttcat |
309 |
Q |
| |
|
|||||||| ||| ||||||| |
|
|
| T |
13285884 |
tccaaccattgtcttgttcat |
13285904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 289
Target Start/End: Complemental strand, 33091280 - 33091151
Alignment:
| Q |
160 |
taaagtggaactctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagactt |
259 |
Q |
| |
|
|||| ||||||| |||||||||| |||| ||| ||| |||||||| ||||||| ||||| || |||||||||| || | | | |||||| | |||| |
|
|
| T |
33091280 |
taaaatggaactgtcacttcaagatcatgttttagggaatttggtttgctttgtaccgtaccttctcccttatgtgttgagtccttattgaatcatactt |
33091181 |
T |
|
| Q |
260 |
gatcttgcttttagatttgtttttcacttt |
289 |
Q |
| |
|
|||||||||||| | |||| |||| ||||| |
|
|
| T |
33091180 |
gatcttgctttttgctttgctttttacttt |
33091151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 114; Significance: 8e-58; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 69 - 309
Target Start/End: Complemental strand, 19361177 - 19360936
Alignment:
| Q |
69 |
ttgtactatgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgg |
167 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||||||| |||| |||||| ||||||||| | ||||||||| |
|
|
| T |
19361177 |
ttgtactatgaagattgttcttgtatatacttcagaatgttccaggatcagatcttctttgaaatctgtcatggaacctgtgcaggatttgataaagtgg |
19361078 |
T |
|
| Q |
168 |
aactctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgc |
267 |
Q |
| |
|
|||| |||||| |||||||||||| || ||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||| |||||| | |
|
|
| T |
19361077 |
aactgtcactttaagtccatgcttcaggtgatttggttagctttgtacagtaccaactcccttatgtgtcgaattcttgttgaataagacaagatcttac |
19360978 |
T |
|
| Q |
268 |
ttttagatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
||||||||||| |||| |||||||||||| |||||| ||||| |
|
|
| T |
19360977 |
ttttagatttgctttttactttccaaccagtgtactattcat |
19360936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 308
Target Start/End: Complemental strand, 34765510 - 34765278
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| || ||| |
|
|
| T |
34765510 |
tgaagattgttcttggacgtacttcagaatgttcatggatcagatcttctttgaaatctgtcttggaactagtgcagaatctcataaagtggagctgtca |
34765411 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| ||||||||| |||| ||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| | |
|
|
| T |
34765410 |
cttcactaccatgctttaggggttttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgact |
34765311 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| |
|
|
| T |
34765310 |
ttgccttttgctttccaaccactgtactgttca |
34765278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 22223477 - 22223640
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
22223477 |
tgaagattgttcttggacgtacttcagaatgttcctgaattagatcttctttgaaatctgtcttggaactagtgcaggatctcataaagtggagctgtca |
22223576 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||| |||||||||| || |||||||||| |
|
|
| T |
22223577 |
cttcatttccatgctttaggggatttggtttgctttgtacagtaccaactcccatatgtgtcga |
22223640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 22249312 - 22249475
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
22249312 |
tgaagattgttcttggacgtacttcagaatgttcctgaattagatcttctttgaaatctgtcttggaactagtgcaggatctcataaagtggagctgtca |
22249411 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||| |||||||||| || |||||||||| |
|
|
| T |
22249412 |
cttcatttccatgctttaggggatttggtttgctttgtacagtaccaactcccatatgtgtcga |
22249475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 89 - 309
Target Start/End: Original strand, 24361592 - 24361814
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaac--tagtgcaggatctcataaagtggaactctcacttcaagtcca |
186 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||||||||||| ||| | ||||| |||||||||||||||| || |||||||| |||| |
|
|
| T |
24361592 |
ttgtacgacttcagaatgttgttagatcagatcttctttgaaatttgtctaggagcgtgtgtgcatgatctcataaagtggagctgtcacttcacttcca |
24361691 |
T |
|
| Q |
187 |
tgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcac |
286 |
Q |
| |
|
|||||| |||||||||||| ||||||| ||||||||||| |||||||||||||| || | |||||| ||| | |||||||||||| |||| ||| || |
|
|
| T |
24361692 |
tgctttaggggatttggtttgctttgtatagtaccaactcccttatgtgtcgaaatcttgttgaatcagattagatcttgcttttgactttgccttttac |
24361791 |
T |
|
| Q |
287 |
tttccaaccactgtactgttcat |
309 |
Q |
| |
|
||||||||||||| | ||||||| |
|
|
| T |
24361792 |
tttccaaccactgcattgttcat |
24361814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 271
Target Start/End: Original strand, 8563153 - 8563335
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||||| ||||| ||| | ||||||||||||||||||||| | |||||||| |||||| |
|
|
| T |
8563153 |
ttgtacgacttcagaatgttgttagatcagatcttctttgaaatatgtctaggatcgcgtgcaggatctcataaagtggtgttgtcacttcacttccatg |
8563252 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgctttt |
271 |
Q |
| |
|
|||| |||||||||||| ||||||| |||||||||| ||||| |||||||| || | |||||| ||| |||||||||||||| |
|
|
| T |
8563253 |
ctttaggggatttggtttgctttgtacagtaccaactcccttacgtgtcgaaatcttgttgaatcagatttgatcttgctttt |
8563335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 89 - 309
Target Start/End: Complemental strand, 24793620 - 24793400
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| | ||||||||||||||||||||| | |||||||| |||||| |
|
|
| T |
24793620 |
ttgtacgacttcagaatgttgttagatcatatcttctttgaaatctgtctaggagcgcgtgcaggatctcataaagtggtgttgtcacttcacttccatg |
24793521 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactt |
288 |
Q |
| |
|
|||| |||||||||||| ||||||| | |||||||| |||||||||||||| || | |||||| |||||||||||||||||| |||||| |||| |||| |
|
|
| T |
24793520 |
ctttaggggatttggtttgctttgtacactaccaactcccttatgtgtcgaaatcttgttgaatcagacttgatcttgcttttggatttgctttttactt |
24793421 |
T |
|
| Q |
289 |
tccaaccactgtactgttcat |
309 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
24793420 |
tccaaccattgtactgttcat |
24793400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 69 - 309
Target Start/End: Complemental strand, 17734300 - 17734060
Alignment:
| Q |
69 |
ttgtactatgaagattgttcttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgga |
168 |
Q |
| |
|
||||||||||| |||| | ||||||||||||||||||||| | ||| |||||||||||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
17734300 |
ttgtactatgaggattttccttgtacgacttcagaatgttccagggtcaaatcttctttgaaatctgtgttggaacatgtgcaggatctcataaagtgga |
17734201 |
T |
|
| Q |
169 |
actctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgct |
268 |
Q |
| |
|
|| | |||| ||||||||||||| |||||||||||| |||||| | |||||||| ||| ||||||||||||||| | |||| | ||||||||||||| |
|
|
| T |
17734200 |
gctgttactttaagtccatgctttaggggatttggttttctttgtacaataccaactccctaatgtgtcgaattcctgtagaatcatacttgatcttgct |
17734101 |
T |
|
| Q |
269 |
tttagatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
|| | ||||| |||| |||||||||| ||| |||||||||| |
|
|
| T |
17734100 |
ttcaaatttgctttttactttccaactactctactgttcat |
17734060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 69 - 309
Target Start/End: Complemental strand, 19035569 - 19035329
Alignment:
| Q |
69 |
ttgtactatgaagattgttcttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgga |
168 |
Q |
| |
|
||||||||||| |||| | ||||||||||||||||||||| | ||| |||||||||||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
19035569 |
ttgtactatgaggattttccttgtacgacttcagaatgttccagggtcaaatcttctttgaaatctgtgttggaacatgtgcaggatctcataaagtgga |
19035470 |
T |
|
| Q |
169 |
actctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgct |
268 |
Q |
| |
|
|| | |||| ||||||||||||| |||||||||||| |||||| | |||||||| ||| ||||||||||||||| | |||| | ||||||||||||| |
|
|
| T |
19035469 |
gctgttactttaagtccatgctttaggggatttggttttctttgtacaataccaactccctaatgtgtcgaattcctgtagaatcatacttgatcttgct |
19035370 |
T |
|
| Q |
269 |
tttagatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
|| | ||||| |||| |||||||||| ||| |||||||||| |
|
|
| T |
19035369 |
ttcaaatttgctttttactttccaactactctactgttcat |
19035329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 49387261 - 49387493
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||| |
|
|
| T |
49387261 |
tgaagattgttcttggacgtacttcagaatgttcctggatcagatcttctttgaaatctgtcttggaactagtgcagaatctcataaagtggagttgtca |
49387360 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| | |
|
|
| T |
49387361 |
cttcactaccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgact |
49387460 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| |
|
|
| T |
49387461 |
ttgccttttgctttccaaccactgtactgttca |
49387493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 24873144 - 24873376
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || | || |||||||||||||| ||||||||||| ||||||||| ||||||||||| | ||| |
|
|
| T |
24873144 |
tgaagattgttcttggacatacttcagaatgttcctgtagcagatcttctttgaaatctgtcttggaacgcgtgcaggatatcataaagtggtgttgtca |
24873243 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| |||||||||| ||||||||| || ||||||| |||||||||| ||||||||||||| || | ||||| ||| |||||||||||| | |
|
|
| T |
24873244 |
cttcacttccatgctttaggggatttgatttgctttgtacagtaccaactcccttatgtgtcgagatcttgatgaatgagatcagatcttgcttttgact |
24873343 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| | | ||||||||||||||||||||||| |
|
|
| T |
24873344 |
ttgcctcttgctttccaaccactgtactgttca |
24873376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 13431442 - 13431552
Alignment:
| Q |
161 |
aaagtggaactctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttg |
260 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||| ||||||||||| ||||||| ||||||||| ||||||| || |||| | |||||| |||||| |
|
|
| T |
13431442 |
aaagtggaactgtcacttcatgtctatgctttaagggatttggtttgctttgtactgtaccaactcccttatgcgttgaatcctgattgaatctgacttg |
13431541 |
T |
|
| Q |
261 |
atcttgctttt |
271 |
Q |
| |
|
|||||||||| |
|
|
| T |
13431542 |
ttcttgctttt |
13431552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0764 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0764
Description:
Target: scaffold0764; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 687 - 919
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| || ||| |
|
|
| T |
687 |
tgaagattgttcttggacgtacttcagaatgttcatggatcagatcttctttgaaatctgtcttggaactagtgcagaatctcataaagtggagctatca |
786 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| | |
|
|
| T |
787 |
cttcactaccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgact |
886 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| |
|
|
| T |
887 |
ttgccttttgctttccaaccactgtactgttca |
919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0313
Description:
Target: scaffold0313; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 77 - 308
Target Start/End: Complemental strand, 5922 - 5690
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| || ||| |
|
|
| T |
5922 |
tgaagattgttcttggacgtacttcagaatgttcatggatcagatcttctttgaaatctgtcttggaactagtgcagaatctcataaagtggagctatca |
5823 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| | |
|
|
| T |
5822 |
cttcactaccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgact |
5723 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| |
|
|
| T |
5722 |
ttgccttttgctttccaaccactgtactgttca |
5690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 77 - 308
Target Start/End: Complemental strand, 20079 - 19847
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| || ||| |
|
|
| T |
20079 |
tgaagattgttcttggacgtacttcagaatgttcatggatcagatcttctttgaaatctgtcttggaactagtgcagaatctcataaagtggagctatca |
19980 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| | |
|
|
| T |
19979 |
cttcactaccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgact |
19880 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| |
|
|
| T |
19879 |
ttgccttttgctttccaaccactgtactgttca |
19847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 101; Significance: 5e-50; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 1974592 - 1974824
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| || ||| |
|
|
| T |
1974592 |
tgaagattgttcttggacgtacttcagaatgttcatggatcagatcttctttgaaatctgtcttggaactagtgcagaatctcataaagtggagctgtca |
1974691 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagat |
275 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| | |
|
|
| T |
1974692 |
cttcactaccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgact |
1974791 |
T |
|
| Q |
276 |
ttgtttttcactttccaaccactgtactgttca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||||||||| |
|
|
| T |
1974792 |
ttgccttttgctttccaaccactgtactgttca |
1974824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 1981952 - 1982115
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || | || |||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||| |
|
|
| T |
1981952 |
tgaagattgttcttggacatacttcagaatgttcctgtagcagatcttctttgaaatctgtcttggaacgcgtgcaggatatcataaagtggtgctgtca |
1982051 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
1982052 |
cttcacttccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcga |
1982115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 1989370 - 1989533
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || | || |||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||| |
|
|
| T |
1989370 |
tgaagattgttcttggacatacttcagaatgttcctgtagcagatcttctttgaaatctgtcttggaacgcgtgcaggatatcataaagtggtgctgtca |
1989469 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
1989470 |
cttcacttccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcga |
1989533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 41208710 - 41208547
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || | || ||||||||| |||| ||||||||||| ||||||||| ||||||||||| || ||| |
|
|
| T |
41208710 |
tgaagattgttcttggacatacttcagaatgttcctgtagcagatcttctttaaaatctgtcttggaacgcgtgcaggatatcataaagtggtgctgtca |
41208611 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||| ||| |||||||||||| |||||| |||||||||| ||||||||||||| |
|
|
| T |
41208610 |
cttcacttccatgttttaggggatttggttttctttgtacagtaccaactcccttatgtgtcga |
41208547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 309
Target Start/End: Original strand, 52955273 - 52955409
Alignment:
| Q |
174 |
cacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttag |
273 |
Q |
| |
|
||||||| |||||||||| ||||||||| || ||||||| |||||||||| |||||||| || || || | |||||| ||| | |||||||||||| | |
|
|
| T |
52955273 |
cacttcacttccatgctttaggggatttgatttgctttgtacagtaccaactcccttatgtatcaaaatcttgttgaatcagattagatcttgctttttg |
52955372 |
T |
|
| Q |
274 |
a-tttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
| ||||| ||| |||||||||||| |||||||||||| |
|
|
| T |
52955373 |
actttgtcttttactttccaaccagtgtactgttcat |
52955409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 52939601 - 52939675
Alignment:
| Q |
93 |
acgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgg |
167 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||||| ||||| ||| | ||||||||||||||||||||| |
|
|
| T |
52939601 |
acgacttcagaatgttgttagatcagatcttctttgaaatatgtctaggagcgcgtgcaggatctcataaagtgg |
52939675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 89; Significance: 7e-43; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 89 - 269
Target Start/End: Original strand, 19548362 - 19548542
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
|||||||||||| |||||||||| |||| |||||||||||||| | ||| ||| | ||||||||||||||||||||| | |||||||| |||||| |
|
|
| T |
19548362 |
ttgtacgacttcggaatgttgttagatcagatcttctttgaaatctatctaggagcacgtgcaggatctcataaagtggtgttgtcacttcacttccatg |
19548461 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgctt |
269 |
Q |
| |
|
|||| |||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
19548462 |
ctttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcgaattcctgttgaatcagacttgatcttgctt |
19548542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 309
Target Start/End: Complemental strand, 36316550 - 36316310
Alignment:
| Q |
69 |
ttgtactatgaagattgttcttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtgga |
168 |
Q |
| |
|
||||||| |||||||| | |||||| |||||||||||||| | | || |||||||||||||| ||||||||| | ||||||||||||||||||||| |
|
|
| T |
36316550 |
ttgtactttgaagattttctttgtacaacttcagaatgttgatagaacagatcttctttgaaatctgtcttggagcgcatgcaggatctcataaagtgga |
36316451 |
T |
|
| Q |
169 |
actctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgct |
268 |
Q |
| |
|
|| |||||||| |||||||||| |||||||||||| ||||||| |||||||||| |||||||| |||| || | |||||| ||| |||||||||| |
|
|
| T |
36316450 |
gctgtcacttcacttccatgctttaggggatttggtttgctttgtacagtaccaactcccttatgtatcgagatcttgttgaatcagatctgatcttgct |
36316351 |
T |
|
| Q |
269 |
tttagatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
||| |||| ||| |||||||||||||||||||||||| |
|
|
| T |
36316350 |
tttgactttgccttttgctttccaaccactgtactgttcat |
36316310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 20947974 - 20947811
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || | || |||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||| |
|
|
| T |
20947974 |
tgaagattgttcttggacatacttcagaatgttcctgtagcagatcttctttgaaatctgtcttggaacgcgtgcaggatatcataaagtggtgctgtca |
20947875 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||| ||| |||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
20947874 |
cttcacttccatgttttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcga |
20947811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 20958363 - 20958200
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| || | || |||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||| |
|
|
| T |
20958363 |
tgaagattgttcttggacatacttcagaatgttcctgtagcagatcttctttgaaatctgtcttggaacgcgtgcaggatatcataaagtggtgctgtca |
20958264 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcga |
239 |
Q |
| |
|
||||| |||||| ||| |||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
20958263 |
cttcacttccatgttttaggggatttggtttgctttgtacagtaccaactcccttatgtgtcga |
20958200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 309
Target Start/End: Complemental strand, 14437543 - 14437323
Alignment:
| Q |
89 |
ttgtacgacttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatg |
188 |
Q |
| |
|
||||||||||||||||||||| | | || |||||||||||||| ||||||||| | ||||||||| |||||||||||| || |||||||| ||||| |
|
|
| T |
14437543 |
ttgtacgacttcagaatgttgatagaacagatcttctttgaaatctgtcttggagcgcgtgcaggatatcataaagtggagctgtcacttcactaccatg |
14437444 |
T |
|
| Q |
189 |
ctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgcttttagatttgtttttcactt |
288 |
Q |
| |
|
|||| |||| ||||||| ||||||| |||||||||| ||||||||||||| || | |||||| ||| ||||||||||||| |||| |||| ||| |
|
|
| T |
14437443 |
ctttaggggttttggtttgctttgtacagtaccaactcccttatgtgtcgagatcttgttgaatcagatctgatcttgcttttgactttgctttttgctt |
14437344 |
T |
|
| Q |
289 |
tccaaccactgtactgttcat |
309 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
14437343 |
tccaactgctgtactgttcat |
14437323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 26362247 - 26362408
Alignment:
| Q |
77 |
tgaagattgttcttgtacg-acttcagaatgttgttgaatcatatcttctttgaaatttgtcttggaactagtgcaggatctcataaagtggaactctca |
175 |
Q |
| |
|
||||||||||||||| || ||||||||||||| ||||||| |||||||||||||| ||||||||||| |||||| || ||||||||||| || ||| |
|
|
| T |
26362247 |
tgaagattgttcttggacatacttcagaatgttcctgaatcagatcttctttgaaatctgtcttggaacgcgtgcagaatatcataaagtggtgctgtca |
26362346 |
T |
|
| Q |
176 |
cttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtc |
237 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||| | |||||||| ||||||||||| |
|
|
| T |
26362347 |
cttcacttccatgctttaggggatttggtttgctttgtacaataccaactcccttatgtgtc |
26362408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 134 - 271
Target Start/End: Original strand, 12841461 - 12841598
Alignment:
| Q |
134 |
tgtcttggaactagtgcaggatctcataaagtggaactctcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatg |
233 |
Q |
| |
|
|||||||||||||||||| || ||||||||||| | |||||||||| | ||||||| |||||||||||| ||||||| |||||| || ||||||| |
|
|
| T |
12841461 |
tgtcttggaactagtgcatgagagaataaagtggaattgtcacttcaagcctatgctttaggggatttggtttgctttgtagagtaccttctcccttatg |
12841560 |
T |
|
| Q |
234 |
tgtcgaattcctcttgaataagacttgatcttgctttt |
271 |
Q |
| |
|
|||||| | | | |||||| ||| | ||||||||||| |
|
|
| T |
12841561 |
tgtcgagtccttattgaatcagattaaatcttgctttt |
12841598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0535 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0535
Description:
Target: scaffold0535; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 173 - 309
Target Start/End: Original strand, 904 - 1040
Alignment:
| Q |
173 |
tcacttcaagtccatgctttgggggatttggttagctttgtttagtaccaacttccttatgtgtcgaattcctcttgaataagacttgatcttgctttta |
272 |
Q |
| |
|
|||||||| |||||||||| |||||||||||| ||||||| | |||||||| ||||||||| | || || | |||| | |||||||||||||||||| |
|
|
| T |
904 |
tcacttcacttccatgctttaggggatttggtttgctttgtacaataccaactcccttatgtgaccaaatcttgttgattcagacttgatcttgcttttg |
1003 |
T |
|
| Q |
273 |
gatttgtttttcactttccaaccactgtactgttcat |
309 |
Q |
| |
|
|||||| |||| |||||||||||| |||| ||||||| |
|
|
| T |
1004 |
gatttgcttttaactttccaaccattgtattgttcat |
1040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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