View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0566_low_9 (Length: 270)
Name: NF0566_low_9
Description: NF0566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0566_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 26881269 - 26881506
Alignment:
| Q |
1 |
taaaactaatcaagatgcaagaa-tc--cccgtacattctacacaacgttataaattgcaaaatcaaaactatataagcattagttccatgggagatcaa |
97 |
Q |
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||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26881269 |
taaaactaatcaagatgcaagaactcatcccgtacattctacacaacgttataaattgcaaaatcaaaactatataagcattagttccatgggagatcaa |
26881368 |
T |
|
| Q |
98 |
atccacattccttgagtatccaaacaagtgtaatattagagttctttcaacaataatttactttttacattgaaatttctatgtaatgccaaagatgcaa |
197 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26881369 |
atccaaattccttgagtatccaaacaagtgtaatattagagttctttcaacaataatttactttttacattgaaatttctatgtaatgccaaagatgcaa |
26881468 |
T |
|
| Q |
198 |
gagacctcatacatgtttccaccaccaccaggcatggt |
235 |
Q |
| |
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||||||||||||||||||||||||||| | |||||||| |
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| T |
26881469 |
gagacctcatacatgtttccaccaccatcgggcatggt |
26881506 |
T |
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