View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0568_low_39 (Length: 267)
Name: NF0568_low_39
Description: NF0568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0568_low_39 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 34437165 - 34437393
Alignment:
| Q |
19 |
ccagatgaaacctttgtgtttggtaccctcgaggtaactttctttaagctggttccaaagaatgatgaatttggaactgaagctactgctccagagctat |
118 |
Q |
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| T |
34437165 |
ccagatgaaacctttgtgtttggtaacctcgaggtaactttctttaagctggttccaaagaatgatgaacttggaactgaagctactgctccagagctat |
34437264 |
T |
|
| Q |
119 |
tcaaactcaactgcaatatcacagtattatcctatgagtcacatcggacatgacactaatacgtagacattggtaatcatttaagaaaattaaattattg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34437265 |
tcaaactcaactgcaatatcacagtattatcctatgagtcacatcggacatgacactaatacgtagacattggtaatcatttaagaaaattaaattattg |
34437364 |
T |
|
| Q |
219 |
aatgtaagtcaacacatgtgtcggtagca |
247 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
34437365 |
aatgtaagtcaacacatgtgtcggtagca |
34437393 |
T |
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