View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0568_low_40 (Length: 267)
Name: NF0568_low_40
Description: NF0568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0568_low_40 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 1885739 - 1885478
Alignment:
| Q |
1 |
tcttaatcccgtggaagtattttgttgcgccaaatttgcttccaattaccatcaattccgtgctgatgagaatttacatccttttccatgatgctcctgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1885739 |
tcttaatcccgtggaagtattttgttgcgccaaatttgcttccaattaccatcaattccgtgctgatgagaatttacatccttttccatgatgctcctgt |
1885640 |
T |
|
| Q |
101 |
atgcgctacgaacggaatagatactgtttttctcaagtttccacacacatctatcttgctgcgcggtagaaatcagaggtgttctgcgaatttgataagc |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1885639 |
atgcgctacgaacggaatagatactgtttttctcaagtttccacacacatctatcttgctgcgcggtagaaatcagaggtgttctgcgaatttgataagc |
1885540 |
T |
|
| Q |
201 |
tgaaatgttgtcaaataaataatattctccatctgccattgtttggtgtatcctttgcttct |
262 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
1885539 |
tgaaatgttgtcaaataaataatattctccatctgccattgtttggtgtatcctttgtttct |
1885478 |
T |
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