View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0571_high_15 (Length: 412)
Name: NF0571_high_15
Description: NF0571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0571_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 78 - 274
Target Start/End: Complemental strand, 8912747 - 8912551
Alignment:
| Q |
78 |
cagagaaagaatatctaactttcctttctgggtttcgtcagttagcaccaaaagatgctgttttgaacaacttagcactttctgatgtgaatttgcaaga |
177 |
Q |
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| T |
8912747 |
cagagaaagaatatctaactttcctttctgggtttcgtcagttagcaccaaaagatgctgttttgaacaacttagcactttctgatgtgaatttgcaaga |
8912648 |
T |
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| Q |
178 |
tataatcagtggtgctgataatgtgagttctgaagaagtgaaagatgaaaatggtcaagtttattatgtttatgagattgatggtgttgcttatcat |
274 |
Q |
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| T |
8912647 |
tattattagtggtgctgataatgtgagttctgaagaagtgaaagatgaaaatggtcaagtttattatgtttatgagattgatggtgttgcttatcat |
8912551 |
T |
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