View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0571_low_36 (Length: 217)

Name: NF0571_low_36
Description: NF0571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0571_low_36
NF0571_low_36
[»] chr8 (1 HSPs)
chr8 (22-78)||(43864423-43864479)


Alignment Details
Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 43864423 - 43864479
Alignment:
Q  22 aattcactcttggccgttgctggtttcttgcaatctaaatataacccttacaatatt 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43864423 aattcactcttggccgttgctggtttcttgcaatctaaatataacccttacaatatt 43864479  T

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