View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0571_low_4 (Length: 743)

Name: NF0571_low_4
Description: NF0571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0571_low_4
NF0571_low_4
[»] chr1 (42 HSPs)
chr1 (185-684)||(41981640-41982139)
chr1 (9-189)||(50970647-50970827)
chr1 (9-186)||(18984118-18984295)
chr1 (9-187)||(29869618-29869796)
chr1 (9-182)||(15173099-15173272)
chr1 (16-188)||(5540194-5540366)
chr1 (9-187)||(5962947-5963125)
chr1 (16-187)||(15646571-15646742)
chr1 (9-183)||(33144288-33144462)
chr1 (16-185)||(29306953-29307122)
chr1 (9-185)||(17433216-17433392)
chr1 (9-185)||(21856412-21856588)
chr1 (9-185)||(8678911-8679086)
chr1 (9-186)||(9018972-9019149)
chr1 (9-194)||(39154010-39154195)
chr1 (11-186)||(26859431-26859605)
chr1 (16-185)||(29307317-29307487)
chr1 (25-183)||(21856044-21856203)
chr1 (25-187)||(39154404-39154567)
chr1 (23-183)||(17433597-17433758)
chr1 (25-184)||(8678542-8678702)
chr1 (27-186)||(50970277-50970437)
chr1 (25-185)||(29870003-29870164)
chr1 (25-184)||(5539817-5539977)
chr1 (26-184)||(4636356-4636515)
chr1 (25-187)||(18984503-18984666)
chr1 (25-188)||(33143912-33144078)
chr1 (25-186)||(15173478-15173639)
chr1 (16-186)||(9019338-9019509)
chr1 (25-186)||(15646191-15646353)
chr1 (45-187)||(52268288-52268430)
chr1 (68-185)||(26859059-26859176)
chr1 (11-112)||(4636045-4636146)
chr1 (25-184)||(5962579-5962739)
chr1 (25-185)||(17112282-17112442)
chr1 (110-183)||(47826966-47827039)
chr1 (69-183)||(52269177-52269291)
chr1 (99-186)||(2733416-2733503)
chr1 (85-177)||(47827033-47827125)
chr1 (15-49)||(17088516-17088550)
chr1 (633-666)||(46317406-46317439)
chr1 (104-149)||(50419725-50419770)
[»] chr7 (32 HSPs)
chr7 (9-189)||(37786763-37786943)
chr7 (9-185)||(19590525-19590701)
chr7 (9-195)||(19830410-19830596)
chr7 (11-185)||(32004985-32005159)
chr7 (9-189)||(38858639-38858819)
chr7 (9-188)||(29100220-29100399)
chr7 (9-187)||(4641438-4641616)
chr7 (11-186)||(2659211-2659386)
chr7 (11-186)||(35289272-35289447)
chr7 (11-186)||(34534162-34534337)
chr7 (16-179)||(23953105-23953268)
chr7 (25-186)||(19590909-19591071)
chr7 (25-186)||(2658838-2659000)
chr7 (16-182)||(4478076-4478242)
chr7 (25-186)||(38859025-38859187)
chr7 (26-191)||(32004608-32004774)
chr7 (25-189)||(19830804-19830968)
chr7 (27-195)||(37787153-37787322)
chr7 (47-186)||(28583438-28583577)
chr7 (25-186)||(34533790-34533952)
chr7 (26-185)||(35288903-35289063)
chr7 (43-186)||(38160950-38161093)
chr7 (25-172)||(29099863-29100011)
chr7 (25-182)||(4641828-4641983)
chr7 (25-186)||(23952729-23952892)
chr7 (44-184)||(28584326-28584466)
chr7 (9-97)||(35578986-35579074)
chr7 (16-51)||(32427397-32427432)
chr7 (9-184)||(35579256-35579430)
chr7 (154-189)||(49064030-49064065)
chr7 (9-55)||(26026688-26026734)
chr7 (9-55)||(48247721-48247767)
[»] chr3 (58 HSPs)
chr3 (9-188)||(37726926-37727105)
chr3 (9-185)||(39555946-39556122)
chr3 (9-197)||(41046688-41046876)
chr3 (11-186)||(20840559-20840734)
chr3 (9-186)||(31779021-31779198)
chr3 (9-182)||(5136983-5137156)
chr3 (9-186)||(24300925-24301102)
chr3 (9-188)||(23644459-23644638)
chr3 (9-183)||(25853596-25853770)
chr3 (9-187)||(27393946-27394124)
chr3 (9-186)||(26837725-26837901)
chr3 (9-186)||(30104481-30104657)
chr3 (30-186)||(48452988-48453144)
chr3 (11-185)||(32535330-32535508)
chr3 (16-185)||(43973441-43973610)
chr3 (9-187)||(17464860-17465039)
chr3 (9-181)||(22425182-22425354)
chr3 (9-182)||(26274936-26275108)
chr3 (25-188)||(31778650-31778814)
chr3 (25-186)||(43973824-43973986)
chr3 (25-185)||(37727314-37727475)
chr3 (25-189)||(39555574-39555739)
chr3 (25-188)||(20840945-20841109)
chr3 (25-187)||(27393659-27393822)
chr3 (25-185)||(25853234-25853395)
chr3 (25-186)||(4275748-4275910)
chr3 (25-186)||(5137365-5137527)
chr3 (44-182)||(25612381-25612519)
chr3 (23-186)||(29801798-29801962)
chr3 (25-187)||(30098147-30098310)
chr3 (25-186)||(17464490-17464652)
chr3 (25-185)||(23644849-23645010)
chr3 (25-188)||(32534956-32535120)
chr3 (25-182)||(26837363-26837521)
chr3 (25-186)||(22424813-22424975)
chr3 (43-185)||(50116812-50116954)
chr3 (64-185)||(29801356-29801477)
chr3 (25-188)||(26274564-26274728)
chr3 (25-188)||(24300554-24300717)
chr3 (44-186)||(51474737-51474880)
chr3 (46-185)||(23228414-23228552)
chr3 (47-186)||(45965937-45966076)
chr3 (25-189)||(41047083-41047246)
chr3 (45-184)||(32697106-32697244)
chr3 (77-184)||(51473429-51473536)
chr3 (44-192)||(37220550-37220698)
chr3 (41-183)||(25420542-25420684)
chr3 (57-166)||(18010162-18010271)
chr3 (44-184)||(25419145-25419285)
chr3 (99-186)||(37222030-37222117)
chr3 (8-55)||(49407925-49407972)
chr3 (9-55)||(55192247-55192293)
chr3 (43-187)||(23227260-23227398)
chr3 (9-69)||(29801532-29801592)
chr3 (9-55)||(37075818-37075864)
chr3 (9-186)||(27200062-27200238)
chr3 (15-49)||(33412383-33412417)
chr3 (154-187)||(25611496-25611529)
[»] chr6 (35 HSPs)
chr6 (9-185)||(11276951-11277127)
chr6 (9-186)||(18257136-18257313)
chr6 (9-186)||(20741099-20741276)
chr6 (9-185)||(10900299-10900475)
chr6 (9-187)||(15828010-15828188)
chr6 (11-185)||(1149802-1149977)
chr6 (11-186)||(12935528-12935703)
chr6 (9-184)||(18505288-18505463)
chr6 (9-184)||(31470685-31470860)
chr6 (9-186)||(11444986-11445163)
chr6 (9-186)||(28472636-28472812)
chr6 (9-186)||(29859825-29860001)
chr6 (25-186)||(2319671-2319832)
chr6 (9-182)||(2322588-2322760)
chr6 (16-182)||(10899942-10900109)
chr6 (25-186)||(12935156-12935318)
chr6 (9-187)||(23073997-23074164)
chr6 (22-185)||(4811372-4811535)
chr6 (25-191)||(23075512-23075679)
chr6 (25-186)||(11445371-11445533)
chr6 (25-186)||(22219737-22219899)
chr6 (16-188)||(11276587-11276760)
chr6 (25-189)||(20741485-20741653)
chr6 (32-184)||(15827639-15827794)
chr6 (25-187)||(31470313-31470476)
chr6 (25-182)||(18504922-18505080)
chr6 (43-188)||(29033431-29033577)
chr6 (68-185)||(18257565-18257682)
chr6 (59-190)||(4811675-4811806)
chr6 (49-187)||(3835135-3835273)
chr6 (44-186)||(18296144-18296285)
chr6 (43-196)||(29035040-29035193)
chr6 (97-186)||(1149464-1149553)
chr6 (10-188)||(35163557-35163736)
chr6 (129-185)||(22534214-22534270)
[»] chr5 (45 HSPs)
chr5 (9-185)||(19359136-19359312)
chr5 (9-186)||(2865124-2865301)
chr5 (9-186)||(18183338-18183515)
chr5 (9-185)||(5819298-5819474)
chr5 (9-185)||(8647438-8647614)
chr5 (9-187)||(29455111-29455289)
chr5 (9-186)||(24362205-24362382)
chr5 (9-186)||(8460929-8461106)
chr5 (9-186)||(15708970-15709146)
chr5 (13-186)||(14215616-14215789)
chr5 (9-182)||(15372242-15372415)
chr5 (9-186)||(164560-164737)
chr5 (20-186)||(14463901-14464066)
chr5 (9-189)||(16018585-16018763)
chr5 (25-182)||(5818932-5819090)
chr5 (25-186)||(8647822-8647984)
chr5 (25-182)||(18182973-18183131)
chr5 (25-186)||(19359520-19359682)
chr5 (25-186)||(24331558-24331722)
chr5 (9-194)||(24331929-24332118)
chr5 (25-183)||(2864756-2864915)
chr5 (43-185)||(7349420-7349562)
chr5 (25-192)||(8461315-8461483)
chr5 (25-183)||(14215243-14215402)
chr5 (25-179)||(24361843-24361997)
chr5 (25-179)||(24325218-24325372)
chr5 (26-185)||(164191-164350)
chr5 (23-182)||(16018969-16019129)
chr5 (23-188)||(25000471-25000637)
chr5 (25-197)||(29454728-29454901)
chr5 (9-163)||(25000112-25000266)
chr5 (26-183)||(15371873-15372030)
chr5 (59-185)||(7348559-7348685)
chr5 (45-185)||(4623148-4623286)
chr5 (25-185)||(15709353-15709513)
chr5 (65-184)||(4222147-4222266)
chr5 (47-185)||(4219663-4219800)
chr5 (47-179)||(6019177-6019309)
chr5 (46-190)||(6018309-6018452)
chr5 (46-172)||(4624631-4624757)
chr5 (43-103)||(13814131-13814190)
chr5 (9-68)||(24325580-24325639)
chr5 (632-666)||(6840510-6840544)
chr5 (9-55)||(16752711-16752757)
chr5 (59-103)||(14462686-14462730)
[»] scaffold0295 (2 HSPs)
scaffold0295 (9-186)||(4792-4969)
scaffold0295 (25-183)||(5179-5334)
[»] chr2 (38 HSPs)
chr2 (11-182)||(11090524-11090695)
chr2 (9-194)||(40027131-40027316)
chr2 (12-182)||(14432145-14432315)
chr2 (9-186)||(239352-239528)
chr2 (9-186)||(18451200-18451377)
chr2 (9-187)||(26538095-26538273)
chr2 (9-186)||(22374319-22374496)
chr2 (9-182)||(40815714-40815887)
chr2 (9-186)||(1978107-1978284)
chr2 (9-185)||(43058333-43058509)
chr2 (16-182)||(8425736-8425902)
chr2 (11-185)||(28616613-28616788)
chr2 (16-186)||(26538454-26538625)
chr2 (9-179)||(3025472-3025641)
chr2 (11-187)||(7446340-7446519)
chr2 (25-186)||(7446730-7446892)
chr2 (44-188)||(20444746-20444890)
chr2 (25-183)||(40815347-40815506)
chr2 (25-187)||(18450828-18450991)
chr2 (25-186)||(22374709-22374871)
chr2 (25-189)||(40027524-40027689)
chr2 (68-186)||(28847123-28847241)
chr2 (44-185)||(35779708-35779849)
chr2 (43-183)||(15551501-15551641)
chr2 (44-184)||(35781067-35781207)
chr2 (25-187)||(28616998-28617161)
chr2 (25-186)||(11090904-11091066)
chr2 (44-186)||(20440436-20440577)
chr2 (25-186)||(43058717-43058878)
chr2 (25-184)||(239736-239896)
chr2 (26-185)||(3025848-3026006)
chr2 (59-186)||(1978528-1978655)
chr2 (44-183)||(8972239-8972378)
chr2 (25-183)||(14432525-14432684)
chr2 (26-182)||(8425358-8425514)
chr2 (45-183)||(15552459-15552596)
chr2 (9-186)||(28143400-28143576)
chr2 (132-189)||(42192736-42192793)
[»] scaffold0273 (2 HSPs)
scaffold0273 (9-186)||(4576-4753)
scaffold0273 (25-146)||(4242-4364)
[»] chr8 (32 HSPs)
chr8 (9-186)||(19176659-19176836)
chr8 (9-189)||(9930026-9930206)
chr8 (9-186)||(12571862-12572040)
chr8 (12-186)||(41681133-41681306)
chr8 (9-186)||(44831614-44831791)
chr8 (9-187)||(33328156-33328334)
chr8 (9-186)||(31133219-31133396)
chr8 (11-186)||(11656454-11656630)
chr8 (9-181)||(13224645-13224816)
chr8 (9-185)||(9178005-9178180)
chr8 (25-191)||(13225023-13225190)
chr8 (9-182)||(4630161-4630328)
chr8 (25-182)||(9928912-9929070)
chr8 (25-186)||(19176289-19176451)
chr8 (25-187)||(44831245-44831408)
chr8 (25-189)||(11656841-11657006)
chr8 (27-186)||(34540934-34541094)
chr8 (25-182)||(12572235-12572393)
chr8 (25-185)||(41681518-41681679)
chr8 (26-184)||(31133605-31133764)
chr8 (25-183)||(33328524-33328683)
chr8 (11-138)||(33743290-33743417)
chr8 (25-186)||(33742921-33743082)
chr8 (77-186)||(11336959-11337068)
chr8 (31-186)||(4629796-4629952)
chr8 (47-182)||(10918129-10918264)
chr8 (44-187)||(8073956-8074098)
chr8 (44-106)||(43958264-43958326)
chr8 (25-93)||(9177724-9177793)
chr8 (153-186)||(9177666-9177699)
chr8 (10-55)||(18805292-18805337)
chr8 (154-187)||(10919700-10919733)
[»] scaffold0951 (2 HSPs)
scaffold0951 (11-186)||(1666-1841)
scaffold0951 (25-186)||(2051-2213)
[»] scaffold0007 (3 HSPs)
scaffold0007 (9-187)||(64300-64478)
scaffold0007 (70-191)||(64735-64856)
scaffold0007 (9-183)||(205738-205911)
[»] chr4 (62 HSPs)
chr4 (9-187)||(15523603-15523781)
chr4 (9-183)||(33109686-33109860)
chr4 (9-186)||(12234328-12234505)
chr4 (9-188)||(46193774-46193953)
chr4 (9-183)||(4219559-4219733)
chr4 (9-199)||(25937656-25937846)
chr4 (9-185)||(11153516-11153692)
chr4 (15-186)||(25447611-25447782)
chr4 (16-183)||(38962195-38962362)
chr4 (9-186)||(51020796-51020973)
chr4 (9-189)||(23494439-23494619)
chr4 (9-188)||(22170306-22170484)
chr4 (9-182)||(22434547-22434718)
chr4 (9-195)||(2118665-2118850)
chr4 (9-182)||(45082435-45082606)
chr4 (9-186)||(48526195-48526371)
chr4 (9-182)||(54995437-54995609)
chr4 (25-185)||(22434179-22434340)
chr4 (25-185)||(45082808-45082969)
chr4 (25-191)||(25447241-25447408)
chr4 (23-185)||(46193405-46193568)
chr4 (25-190)||(48526565-48526731)
chr4 (26-186)||(15523234-15523395)
chr4 (69-186)||(23494872-23494989)
chr4 (25-188)||(11153143-11153307)
chr4 (9-116)||(12503805-12503912)
chr4 (25-186)||(20470895-20471057)
chr4 (25-185)||(12234713-12234874)
chr4 (25-196)||(2118282-2118454)
chr4 (44-192)||(48293587-48293735)
chr4 (59-186)||(33109883-33110010)
chr4 (25-182)||(4219943-4220101)
chr4 (25-182)||(54995072-54995230)
chr4 (26-189)||(25938056-25938220)
chr4 (25-186)||(51021180-51021341)
chr4 (25-187)||(18751597-18751760)
chr4 (43-184)||(20958264-20958403)
chr4 (49-189)||(16690932-16691072)
chr4 (49-186)||(48708294-48708431)
chr4 (25-168)||(12503453-12503597)
chr4 (71-183)||(18763951-18764063)
chr4 (44-184)||(44892552-44892692)
chr4 (76-185)||(35363036-35363146)
chr4 (44-185)||(48294946-48295088)
chr4 (47-178)||(20957196-20957327)
chr4 (44-167)||(43243685-43243807)
chr4 (43-182)||(48713749-48713888)
chr4 (44-184)||(44890518-44890658)
chr4 (47-167)||(43281198-43281317)
chr4 (59-187)||(10258306-10258434)
chr4 (49-185)||(16691481-16691616)
chr4 (9-74)||(18751971-18752036)
chr4 (120-187)||(16318256-16318323)
chr4 (44-127)||(43242328-43242411)
chr4 (9-187)||(17503972-17504149)
chr4 (9-49)||(17504329-17504369)
chr4 (9-49)||(35193443-35193483)
chr4 (77-195)||(55189518-55189636)
chr4 (44-116)||(44220781-44220853)
chr4 (9-42)||(40160236-40160269)
chr4 (103-186)||(35193766-35193849)
chr4 (47-93)||(30596342-30596388)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-186)||(134042-134219)
[»] scaffold1223 (2 HSPs)
scaffold1223 (9-183)||(755-928)
scaffold1223 (16-185)||(1116-1286)
[»] scaffold0027 (2 HSPs)
scaffold0027 (9-186)||(42528-42704)
scaffold0027 (16-187)||(42167-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (9-182)||(10242-10414)
scaffold0432 (59-182)||(9935-10057)
[»] scaffold0176 (2 HSPs)
scaffold0176 (18-189)||(18831-19001)
scaffold0176 (88-185)||(19069-19166)
[»] scaffold0417 (2 HSPs)
scaffold0417 (9-166)||(10640-10797)
scaffold0417 (25-185)||(11007-11168)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-116)||(16565-16672)
scaffold0157 (25-168)||(16880-17024)
[»] scaffold0113 (1 HSPs)
scaffold0113 (59-188)||(28662-28791)
[»] scaffold0057 (2 HSPs)
scaffold0057 (44-182)||(61862-62000)
scaffold0057 (111-186)||(61027-61102)
[»] scaffold1585 (1 HSPs)
scaffold1585 (43-184)||(568-709)
[»] scaffold0076 (1 HSPs)
scaffold0076 (82-182)||(8451-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (44-181)||(454-589)
[»] scaffold0168 (1 HSPs)
scaffold0168 (43-136)||(7691-7784)


Alignment Details
Target: chr1 (Bit Score: 476; Significance: 0; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 185 - 684
Target Start/End: Complemental strand, 41982139 - 41981640
Alignment:
Q  185 ctttaataaatgatactaactgttttatttttatggcaattgttaaatactgtcctgtttaagacagactttgcactatgtagcaactagcatgagctaa 284  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41982139 ctttaataaatggaactaactgttttatttttatggcaattgttaaatactgtcctgtttaagacagactttgcactatgtagcaactagcatgagctaa 41982040  T
Q  285 gtttataggtatagaaagttgagtaataaaggccatttaaaatcgaaactttataatataatttcatttattcattcacttgctaccaatattaactaac 384  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41982039 gtttataggtatagaaagttgagtaataacggccatttaaaatcgaaactttataatataatttcatttattcattcacttgctaccaatattaactaac 41981940  T
Q  385 tatttattggttaattaggcaaaattgttgtttcaaagtagtgaaactgaaagatgaagaagaaagagttttcttgtttagtagaaaaagaaaatgtttg 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41981939 tatttattggttaattaggcaaaattgttgtttcaaagtagtgaaactgaaagatgaagaagaaagagttttcttgtttagtagaaaaagaaaatgtttg 41981840  T
Q  485 tttgacttgactcaaaaaagaatcattgagcaaaaattcaacataattctcccgctaatctcgcctcttcatacaatacacagacatttccctcctttat 584  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41981839 tttgacttgactcaaaaaagaatcattaagcaaaaattcaacataattctcccgctaatctcgcctcttcatacaatacacagacatttccctcctttat 41981740  T
Q  585 gtcccaaaccgctctcattctcacttttttcttcaactaacacacaacactacacaatgattcaactaccccatttcttcttctccttcttaatcatcat 684  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41981739 gtcccaaaccgctctcattctcacttttttcttcaactaacacacaacagtacacaatgattcaactaccccatttcttcttctccttcttgatcatcat 41981640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 50970647 - 50970827
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||||||| | |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccttta 50970827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 18984295 - 18984118
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 18984118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 29869796 - 29869618
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||| | ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcctt 29869618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||  |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 5540194 - 5540366
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttct 5540293  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    | | |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  5540294 tctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttt 5540366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 5962947 - 5963125
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||| ||||||||||||||| || ||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctt 5963125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 15646571 - 15646742
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 15646670  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    | | ||||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  15646671 tctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 15646742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 33144288 - 33144462
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 29307122 - 29306953
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 29307023  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    | | |||||||||| || |||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  29307022 tctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 17433392 - 17433216
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | ||||||||||||| |  ||||||| ||||||  |||||||| ||||||||||||||||||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 21856412 - 21856588
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | |||||||| ||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 8678911 - 8679086
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| ||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
     ||||||| | |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 9019149 - 9018972
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcct 9018972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 39154195 - 39154010
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaa 194  Q
    |||||||| | ||||||||||||| || ||||||||||||||  |||||||| || ||||||||||||||||||| || |||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaagtctataataaa 39154010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 26859431 - 26859605
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
     ||||| | ||||||||||||||||  |||||||||||||  |||||||||||||| |||||||||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagcct 26859605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 29307317 - 29307487
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 29307416  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    || | |||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||    
T  29307417 ttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 21856203 - 21856044
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | ||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 39154404 - 39154567
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||||||||||||| || ||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgtttt 39154503  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  39154504 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 39154567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 23 - 183
Target Start/End: Original strand, 17433597 - 17433758
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||||||||||||||||| || ||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 8678702 - 8678542
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||| ||||||| || ||  | ||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  8678702 ctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 8678603  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  8678602 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 50970437 - 50970277
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaa 125  Q
    ||||||||||||||||||||||| |||||  | ||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |  |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  126 aagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 29870003 - 29870164
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |  ||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 5539977 - 5539817
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||| ||||||| |||||  | ||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| | ||||    
T  5539977 ctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 5539878  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  5539877 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 4636356 - 4636515
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||| ||| ||||||||||||||||||||||||||||||| ||||||||| | |||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 18984503 - 18984666
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| |||||||||| |||| | |||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  18984503 ctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18984602  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||    
T  18984603 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcctt 18984666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 33144078 - 33143912
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| |||| |||||| ||||||||||||||||||||||||||||| | ||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtg--taattaagccttt 188  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtataattaagccttt 33143912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 15173478 - 15173639
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  15173578 aaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15173639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 9019338 - 9019509
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||| |||||||||||||| |||||||||||||| ||| |  | ||||| || ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 9019437  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    || | |||||||| ||||| |||||||| |||||||   |||||||||||||||||||||||||||||||||    
T  9019438 ttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 9019509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 15646353 - 15646191
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||| |||||  | |||||  | ||||||| ||||||||||||||||||||||||||||| ||| ||||||| | ||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgtttt 15646254  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  15646253 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 15646191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 45 - 187
Target Start/End: Complemental strand, 52268430 - 52268288
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| | |||||||||||||||| ||||| ||||||||||||||||| |||| ||| |||||||| | ||||||||||||||||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  145 tgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||| |  |||||| ||||||||||||||||||||||||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagcctt 52268288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 26859176 - 26859059
Alignment:
Q  68 ggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggac 167  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||  ||||||||| |||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  168 caaaagtgtaattaagcc 185  Q
    ||||||||||||||||||    
T  26859076 caaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 4636146 - 4636045
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||    
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgt 4636047  T
Q  111 tt 112  Q
    ||    
T  4636046 tt 4636045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 5962739 - 5962579
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||| ||||| |||| |||||  | ||||| || ||||| | |||||||||||||||||||||| ||||| |||||||||||| | ||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgtttt 5962640  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| ||||||||||||||| || |||| |||||||||||||||| |||||||||||    
T  5962639 aaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 17112442 - 17112282
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||| ||||||||| |||||  | ||||| || ||||||| ||||||||||| ||||||||||||||||||||  |||| || ||||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctatttt 17112343  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||   |||| |||| |||||| | ||||||| ||| ||||||||||||||||||||    
T  17112342 aaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  110 ttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  69 gtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc 168  Q
    |||||| ||||| ||||||||||||||||| |||| |||  ||||||| | |||||||||||||| |||  |||| |||||||  |||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  169 aaaagtgtaattaag 183  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 2733416 - 2733503
Alignment:
Q  99 ttgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||| || ||  ||||||||| |||||||||||| |||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcct 2733503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  85 aacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgta 177  Q
    |||||||||||||||| ||||||  ||||||| | ||||||||||||| ||||| |||||||||||  |||||||| |  || ||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 666
Target Start/End: Complemental strand, 46317439 - 46317406
Alignment:
Q  633 actacacaatgattcaactaccccatttcttctt 666  Q
    ||||||||||||||||||||||||||||||||||    
T  46317439 actacacaatgattcaactaccccatttcttctt 46317406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 50419725 - 50419770
Alignment:
Q  104 ggaccgttttgttatattttaaaagggcaggaccagtttcgtgagt 149  Q
    |||||||||||||  ||||||||| |||||||||| ||||||||||    
T  50419725 ggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagt 50419770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 2e-85; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 37786943 - 37786763
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccttta 37786763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 19590701 - 19590525
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 9 - 195
Target Start/End: Complemental strand, 19830596 - 19830410
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaat 195  Q
    |||||||| | ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||| ||| | ||||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctattataaat 19830410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 32004985 - 32005159
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||| ||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 38858819 - 38858639
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccttta 38858639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 29100220 - 29100399
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||||| | ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaaaccttt 29100399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 4641616 - 4641438
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaaacctt 4641438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 2659211 - 2659386
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||| | ||||||||||||| |||||||||| ||| ||  ||||||| |||||||||||| |||||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcct 2659386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 35289272 - 35289447
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||| | |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 35289447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 34534162 - 34534337
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||| | ||||||| |||||||| ||||||||||||||  |||||||||||| ||||||||| |||||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagcct 34534337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 23953105 - 23953268
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 23953204  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
    | | |||| ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||    
T  23953205 tctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 19590909 - 19591071
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcct 19591071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 2659000 - 2658838
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| |||||||||||||||||||||  | ||||| || |||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagcct 2658838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 4478076 - 4478242
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||  | || |    
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttat 4478175  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    | | |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||| ||||    
T  4478176 tctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaa 4478242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 38859025 - 38859187
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||| | ||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 38859187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 32004774 - 32004608
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||||||||||||||||||| |||||  | ||||| || ||||||  ||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaat 191  Q
    ||||||||||| || |||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctataat 32004608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 19830804 - 19830968
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || |||||||  |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||||| |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttta 19830968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 27 - 195
Target Start/End: Original strand, 37787153 - 37787322
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaa 125  Q
    ||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||| |  |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  126 aagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaat 195  Q
    ||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||  |||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcctaaaataaat 37787322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 28583577 - 28583438
Alignment:
Q  47 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||| |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||  ||||||||||||||||||||||||||||||||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaagcct 28583438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 34533952 - 34533790
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| ||||||||||||||||||||||||  | ||||| || ||||||| | |||||||||||||||||||||||||| |||| |||| || | ||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgtttt 34533853  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  34533852 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 34533790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 35289063 - 35288903
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    ||||||||||||||||||| |||| |||||  | |||||  |  |||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  35289063 taaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 35288964  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||  |||||| |||| |||||||||||||||||||||    
T  35288963 aaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 43 - 186
Target Start/End: Complemental strand, 38161093 - 38160950
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||||||| |||||||||||||  ||||||| | ||||||||||||||||  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||    
T  38160993 cgtgagtaggccaaaacccgaggaccaaaagtgtaattaagcct 38160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 29100011 - 29099863
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||| ||| ||||| ||| |  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaa 172  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| ||  |||||| |||| |||||||||||||||||||||||||||||||||||| | ||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| ||||||||||   |||||||  ||||||||||||||||||||||||||||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 23952892 - 23952729
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| ||| |  | ||||| |  ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||    
T  23952892 ctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtttt 23952793  T
Q  124 aaaagggcaggaccagtttcgtgagta-aaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||| ||||| |||||||||||    |||||||||||||||||||||||||||||||||    
T  23952792 aaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagcct 23952729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 28584326 - 28584466
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||||||| || ||||||| ||||||||||||||||||||||||  ||||||| | |||||||||| || ||||| ||||    
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| ||  ||||| ||||||||| ||||||||||||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 35579074 - 35578986
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgata 97  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||||   ||||| ||  ||||||| |||| ||||| ||| ||||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggagttgaaaataggatgtaggattaaaactgcaaaaaacatgata 35578986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgttttt 51  Q
    ||||||||||||||||||||||||||||||||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 35579256 - 35579430
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| ||||| |||||||||| |||   ||||| || |||| ||  |||| ||||| ||| |||||| ||  |||||     
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 35579354  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||  |||| |||  ||||  | || |||||||||   | |||||  |||||| |||||||||||||||||    
T  35579355 gttttgtttgatttgaaagaggcataatcattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaagc 35579430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 49064065 - 49064030
Alignment:
Q  154 caaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    ||||| ||||||||||||||||||||||||||||||    
T  49064065 caaaatacgaggaccaaaagtgtaattaagccttta 49064030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 26026688 - 26026734
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggag 26026734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 48247767 - 48247721
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggag 48247721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 2e-82; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 37727105 - 37726926
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||||||| |||||||||||||| ||||||||||| || | |||||||||||||||||||||||||||||||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagccttt 37726926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 39555946 - 39556122
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
     ||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 9 - 197
Target Start/End: Complemental strand, 41046876 - 41046688
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaatga 197  Q
    |||||||| | ||||||||||||| |||||||||||| | ||  |||||||||||||||||||||||||||||| || |||||||||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaaaccattaataaatga 41046688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 20840734 - 20840559
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 20840559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 31779021 - 31779198
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 31779198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 5137156 - 5136983
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | ||||||||||||| ||||| ||||||||||   ||||||||||||||||||||||||||||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaa 5136983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 24300925 - 24301102
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 24301102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 23644638 - 23644459
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||||| | |||||||| |||||||||| |||||||||||  |||||| |||||||||||||||||||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccttt 23644459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 25853596 - 25853770
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
     ||||||| | |||||||| | || ||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 27393946 - 27394124
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||| | |||||||| |||||||||  |||||||||||  |||||||||||||||||||||||||||||||||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 27394124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 26837725 - 26837901
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| |||||| ||||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 26837901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 30104657 - 30104481
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||| | || | ||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 30104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 48453144 - 48452988
Alignment:
Q  30 actgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||| |    
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatg 48453045  T
Q  130 gcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  48453044 gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcct 48452988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 32535330 - 32535508
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaat-----gataattgaagg 105  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||     ||||||||||||    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  106 accgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 43973610 - 43973441
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 43973511  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    | | |||||||||||||  | || |||||||||||   ||||||||||||||||||||||||||||||||    
T  43973510 tctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 17464860 - 17465039
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaa-atgcaacaaaaatgataattgaaggac 107  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  108 cgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||||||| |||||||||||||   |||||||||| || |||  |||||||||||||||||||| ||||||||||||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcctt 17465039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaatta 181  Q
    |||||||| | ||||| ||||||| |||||| ||||||||||  || ||||||||||||||||||||||||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 26274936 - 26275108
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| || | ||||||||||| |||||||||||||||||||   |||||||| ||| |||||| | |||||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaa 26275108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 31778814 - 31778650
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||  |||||||||||||||| | ||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagccttt 31778650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 43973824 - 43973986
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 43973986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 37727314 - 37727475
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 25 - 189
Target Start/End: Complemental strand, 39555739 - 39555574
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||| | ||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttta 39555574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 25 - 188
Target Start/End: Original strand, 20840945 - 20841109
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagccttt 20841109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 27393822 - 27393659
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| |  | ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||| |||||||||||||| |||||||   ||||||||||||||||||||||||||||||||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctt 27393659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 25853395 - 25853234
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 4275748 - 4275910
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 4275910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 5137365 - 5137527
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||  |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 25612381 - 25612519
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||||||||| ||||    
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||   |||||||||||||||||||||||||||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 23 - 186
Target Start/End: Original strand, 29801798 - 29801962
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    |||||||| |||||||||||||||||| |||||  | ||||| || ||| ||| |||||||||||||||||||||||||||| |||||||||||| | ||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcct 29801962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 30098147 - 30098310
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||| ||||||||||| || ||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 30098246  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  30098247 aaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcctt 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 17464652 - 17464490
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||| | ||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 17464553  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||| ||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  17464552 aaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcct 17464490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 23644849 - 23645010
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||  | |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||| ||||||| |||||||||||  |||||||||||||||||||||| ||||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 32535120 - 32534956
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||| | || | |||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  32535120 ctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 32535021  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||| |||||    
T  32535020 aaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaaaccttt 32534956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 26837521 - 26837363
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||||| || |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||| |||||||||||  |||||| || |||||||||| |||||||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaa 26837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 22424975 - 22424813
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||| ||| ||||||||||| ||||  |  ||||||||| |||||||||||||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcct 22424813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 50116812 - 50116954
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||| | ||| ||||||||| ||||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||||  ||||||||||||| ||||||||||||||||||    
T  50116912 cgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 29801477 - 29801356
Alignment:
Q  64 ggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacga 163  Q
    |||||||| || |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||  |||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  164 ggaccaaaagtgtaattaagcc 185  Q
     |||||||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 26274728 - 26274564
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||  |||||||| |||||  | ||||| || |||| || ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26274629  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||||||||||||||||||||||||  |||||| || |||| ||||| ||||||||| |||||    
T  26274628 aaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaaaccttt 26274564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 24300717 - 24300554
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||| ||| ||||| ||||||||||||||||||||||| |||||||| || | ||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||| ||||||||||||||||| ||| ||||||||||| |||||||| ||||||||| |||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaaaccttt 24300554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 51474737 - 51474880
Alignment:
Q  44 gcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    |||||||||||| |||||| | |||||||||| ||||||||||||||||||||||| | ||||||  ||||||||| ||||||||||||| ||||| |||    
T  51474737 gcgtttttggaggataaaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaattt 51474836  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||  |||||||||| | |||||||||||||||||||||    
T  51474837 cgtgagtatgccaaaacacgggaaccaaaagtgtaattaagcct 51474880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 23228414 - 23228552
Alignment:
Q  46 gtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    |||||||||| |||||||||| ||||||| ||||||||||| ||||||||||||||||||||  |||||||   ||||||||||||| || || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgtt-cgttttaaaagggcatgatcattttcgt 23228512  T
Q  146 gagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||  |||||||||| ||||||||||||||||||||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 47 - 186
Target Start/End: Complemental strand, 45966076 - 45965937
Alignment:
Q  47 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| | |||||||||| ||| | ||||||||||||| |||||||||| |||||||  ||||||||| ||||||||| ||||||  |  ||||||    
T  45966076 tttttggaggagaaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtg 45965977  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||  ||||||||||||||||||||||||||||||||||    
T  45965976 agtatgccaaaacacgaggaccaaaagtgtaattaagcct 45965937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 41047083 - 41047246
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||| |||||| || | ||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgtttt 41047181  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||||| ||| ||||||||||||||||  |||||||| || || | ||||||||||||| ||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaaaccttta 41047246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 32697106 - 32697244
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| ||  ||||||| | ||||||||||||  ||| | |||||    
T  32697106 cgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  145 tgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||  | |||||||||||||||||| | |||||||||    
T  32697205 tgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 51473536 - 51473429
Alignment:
Q  77 aaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgt 176  Q
    |||| |||||||||||||||||  |||||||  ||||||| | ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||    
T  51473536 aaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaaaagtgt 51473437  T
Q  177 aattaagc 184  Q
    ||||||||    
T  51473436 aattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 44 - 192
Target Start/End: Complemental strand, 37220698 - 37220550
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||| ||||||||  |||| || | ||||||||| ||| || |  | |     
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaata 192  Q
    |||||||  |||||| ||||||||||||||||||||||||||| |||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctataata 37220550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 41 - 183
Target Start/End: Original strand, 25420542 - 25420684
Alignment:
Q  41 tctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagt 140  Q
    ||||| |||||| || ||||||||||||||| || |||||||||||||||||| |||||||||||||  |||| || ||||||||||||||  || || |    
T  25420542 tctgcatttttgaaggataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaat 25420641  T
Q  141 ttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||   ||||| |||| || ||||||||||||||||    
T  25420642 ttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 18010162 - 18010271
Alignment:
Q  57 ataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaa 156  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||  ||  ||||||| | |||||||||||| | |||| ||||||||||| || ||    
T  18010162 ataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaa 18010261  T
Q  157 aacacgagga 166  Q
    |||| |||||    
T  18010262 aacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 25419285 - 25419145
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaa-tgataattgaa-ggaccgttttgttatattttaaaagggcaggaccagtt 141  Q
    ||||||||||||  |||||||||||  ||||  |||| ||||| ||||| ||||||||||| |||| |||||||| | |||||||||||||| || | ||    
T  25419285 gcgtttttggag--taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatt 25419188  T
Q  142 tcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||| | ||||||||| |||||||||| |||| ||||    
T  25419187 tcgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 37222030 - 37222117
Alignment:
Q  99 ttgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||  |||||||| | |||||||| |||||||||| ||| |||||||   |||||||||||||||||||||||||||||||||    
T  37222030 ttgaaggatggttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcct 37222117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 49407972 - 49407925
Alignment:
Q  8 tagcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggag 49407925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 55192293 - 55192247
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggag 55192247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 187
Target Start/End: Complemental strand, 23227398 - 23227260
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||||| | |||| |||||||||||||||||||| ||||| |||||   |||||| | ||| |       ||||||| |||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtttca------gaggaccatttt 23227305  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||||||| |||||||||   |||||||||| ||||| ||||||    
T  23227304 cgtgagtaagccaaaacacagagaccaaaagtctaattgagcctt 23227260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggg 69  Q
    |||||| | |||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 37075864 - 37075818
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggag 37075818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 27200062 - 27200238
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||   ||||| || |||| ||  |||| ||||| ||| |||||| ||  |||||     
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 27200160  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    || |||||  |||| |||  ||||| |||| |||||||||     |||||  | ||||||||||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcct 27200238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 33412383 - 33412417
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||| ||||||||||||||||    
T  33412383 gggggtaggtctaaaactatcatttctctgcgttt 33412417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 187
Target Start/End: Complemental strand, 25611529 - 25611496
Alignment:
Q  154 caaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||||||||||| ||||||||||||||||||||    
T  25611529 caaaacacgaggatcaaaagtgtaattaagcctt 25611496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 1e-80; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 11276951 - 11277127
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 18257313 - 18257136
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 18257136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 20741276 - 20741099
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
     ||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 20741099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 10900299 - 10900475
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | ||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 15828010 - 15828188
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||| | ||||||||||| | |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 15828188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 1149802 - 1149977
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttt-tggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  110 ttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||| ||||||||||||||| |||||||||| ||||||  | |||||||||||||||||||||||||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 11 - 186
Target Start/End: Original strand, 12935528 - 12935703
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||| | ||||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagcct 12935703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||| | |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 9 - 184
Target Start/End: Original strand, 31470685 - 31470860
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||| | |||||||||||||| ||||||||||||||||  | ||||||| ||||||||||||||||||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 11445163 - 11444986
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
     |||| || | ||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 28472812 - 28472636
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
     ||||||| | |||||||| |||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 28472636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 29860001 - 29859825
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
     ||||||| | |||||||| |||||||||| ||||||||||   ||||||||||||||||||||||||||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 29859825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 2319832 - 2319671
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcct 2319671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgtttt-ggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | |||||||| |||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||||||||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 10900010  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    || | |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  10900009 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 12935318 - 12935156
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 12935156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 23074164 - 23073997
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||           ||||||||||||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatg-----------ataattgaaggacc 23074076  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 23073997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 22 - 185
Target Start/End: Complemental strand, 4811535 - 4811372
Alignment:
Q  22 ggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||| |||| |||||||||||| |||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| || ||||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||||| ||||||||||||||||| ||||||| ||  ||||||||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 23075512 - 23075679
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| |||||||||  ||||| | || ||||| | ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaat 191  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctataat 23075679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 11445371 - 11445533
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11445533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 22219737 - 22219899
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 22219899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 11276760 - 11276587
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||| |||||||||||||||||||||||||||||||  | ||||| || ||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttg 11276661  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    || | ||||||||||| |||| ||||||| |||||| ||||||||||| |||| ||| ||||||||||||||||    
T  11276660 ttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagccttt 11276587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 20741485 - 20741653
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaa---atgataattgaaggaccgttttgttatat 120  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||| ||||   ||||||||||||||||||||||||| | |    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  121 tttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagccttta 20741653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 15827794 - 15827639
Alignment:
Q  32 tgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt--tttgttatattttaaaag 128  Q
    |||||||| ||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| ||||||||||||  |||||||| |||||||||    
T  15827794 tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaag 15827695  T
Q  129 ggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15827694 gacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 31470476 - 31470313
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||| ||||||||| ||| |||||||| | ||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||| ||| |||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctt 31470313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18505080 - 18504922
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||| | ||| | |||  | ||||| || ||||||| |||||||| |||||||||||||||||||| ||||||||||| | ||||    
T  18505080 ctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgtttt 18504981  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  18504980 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 29033577 - 29033431
Alignment:
Q  43 tgcgtttttggag-aataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtt 141  Q
    ||||||||||||| || |||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  142 tcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    ||||||| |  |||||| |||||||||||||||||||||||| ||||    
T  29033477 tcgtgagcaggccaaaatacgaggaccaaaagtgtaattaagtcttt 29033431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 18257565 - 18257682
Alignment:
Q  68 ggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggac 167  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||   ||||||||||||||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  168 caaaagtgtaattaagcc 185  Q
    ||||||| ||||||||||    
T  18257665 caaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 4811675 - 4811806
Alignment:
Q  59 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||| || ||||||| ||||||  ||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  159 cacgaggaccaaaagtgtaattaagcctttaa 190  Q
    |||||||| ||||||| |||||||||| ||||    
T  4811775 cacgaggatcaaaagtataattaagccattaa 4811806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 3835135 - 3835273
Alignment:
Q  49 tttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||||  ||||||| | |||||||  |||||||||| |||||||||    
T  3835135 tttggaggataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgag 3835234  T
Q  149 taaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||   ||||||||  ||||||||||||||||||| ||||    
T  3835235 taggtcaaaacacatggaccaaaagtgtaattaaacctt 3835273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 44 - 186
Target Start/End: Complemental strand, 18296285 - 18296144
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||  | || |||     
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||  |||||||||||||| |||| | |||||||||||    
T  18296186 gtgagtaagtcaaaacacgaggactaaaattataattaagcct 18296144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 43 - 196
Target Start/End: Original strand, 29035040 - 29035193
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | ||||||| |||| ||| ||||||||||||||||||||||| | ||||||  ||||||| | |||||||||||||  |||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaatg 196  Q
    ||||||||  | ||||||||||||| ||||||||||||||| | |||| |||||    
T  29035140 cgtgagtaggctaaaacacgaggacgaaaagtgtaattaagtcattaaaaaatg 29035193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 1149553 - 1149464
Alignment:
Q  97 aattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 1149464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 188
Target Start/End: Original strand, 35163557 - 35163736
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaa-tgataattgaaggacc 108  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||   ||||| || |||||||  |||| ||||| |||||   ||| || | ||||     
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaacatatagtttagggacg 35163656  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
     |||||||  |||| |||  ||||| |||| |||||||||     |||||  || |||||||||||||||||||||||||    
T  35163657 attttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagccttt 35163736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  129 ggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||||| ||||||||||    ||||| ||||||||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 1e-80; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 19359312 - 19359136
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 2865124 - 2865301
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 2865301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 18183338 - 18183515
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18183515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 5819298 - 5819474
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 8647614 - 8647438
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
     ||||||| | |||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 29455111 - 29455289
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
     ||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcctt 29455289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 24362205 - 24362382
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||| || | |||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 24362382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 8461106 - 8460929
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||| |||| ||||||||||| ||||||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagcct 8460929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 15709146 - 15708970
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcct 15708970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 14215616 - 14215789
Alignment:
Q  13 tagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttt 112  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || |||||||||||||||||||||| ||||||||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  113 tgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||| | |||||||||||||||| ||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcct 14215789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 15372242 - 15372415
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||  |||| |  ||||||||||||||||||||| ||||||||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15372415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 164560 - 164737
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | ||||||||||||| ||||||||| ||||||   |||||||| ||||| ||||| | |||||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcct 164737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 14463901 - 14464066
Alignment:
Q  20 taggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttata 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||| ||||||||| ||    
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggg-taggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  120 ttttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||| ||  |  |||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagcct 14464066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 16018763 - 16018585
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||| | ||||||||| |||||| ||||||||||||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||||||| ||||||||||||||| || || |||||||| ||  ||||||||||| |||||||||||||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccttta 16018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 5819090 - 5818932
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||| || |||||||||||||||||||||||||||| |||||||||||| | ||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5818932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 8647822 - 8647984
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| |  |||| || ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 18183131 - 18182973
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| | |||||| | || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 18182973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 19359520 - 19359682
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| | ||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgtttt 19359619  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  19359620 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19359682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 24331722 - 24331558
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaat--gataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||||||||||||||| |||||  | ||||| || | |||||||||||||||||||||||   ||||||||||||||||||||||| | ||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcct 24331558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 24331929 - 24332118
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatg-aaaaatgcaac-aaaaatgataattgaagga 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||| ||||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  107 ccgttttgttatatttt-aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc-aaaagtgtaattaagcctttaataaa 194  Q
    |||||||||| | |||| |||| ||||||| ||||||||||||||  |||||||| || |||| ||||||||||||||| || |||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaagtctataataaa 24332118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 2864915 - 2864756
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| || || |||||||||||  ||||||||| |||||||||||||||||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 43 - 185
Target Start/End: Original strand, 7349420 - 7349562
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||||||  |||||||| | ||||||||| ||||||||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  7349520 cgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 25 - 192
Target Start/End: Original strand, 8461315 - 8461483
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || |||| || |||||||||| |||||||||||||||||||||||||||||| | ||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgtttt 8461414  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaata 192  Q
    ||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  8461415 aaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttaaata 8461483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||| ||||||||| ||||||| | ||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||| |  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| | |||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
     ||||||| || |||||||||| |||  |||||||| | ||||||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 179
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||| | |||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
     ||||||| || |||||||||| |||  |||||||| | ||||||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 164350 - 164191
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    ||||| |||||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||| ||||||||||| |||||||||||| | || ||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttata 164252  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  164251 aaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 16018969 - 16019129
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||||||||||||||||| |||||  ||||| | || ||||||| ||||||| ||||||||||||||||||||| ||| |||| || ||||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||| ||||||||| |||||||||||  |||||||| |||||||||||||||||||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaa 16019129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 25000471 - 25000637
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    |||||||||||||||||||||||||||||||||  | ||||| || ||| ||| |||||||||||||||||||||||||||| |||| ||||||| | ||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||||  || ||||| |||||||||||  |||||||| || ||||||||||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagccttt 25000637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 29454901 - 29454728
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||| |||||||||||||| ||||||||||||||| | ||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaatga 197  Q
    ||||||||| ||||| |||||||||||  ||||||||| | ||||||||||| ||||||||||| ||| |||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagccttaaattaatga 29454728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacga 163  Q
     |||| || | |||||| |||||| |||||  ||||||||||  |||||||||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 15372030 - 15371873
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaata-aaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    ||||||| |||||||||||||||| | |||  |  |||| || ||| ||| ||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  15372030 taaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 15371931  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||||||||  |||||||||| ||||||| ||||||| ||||||||||||||||    
T  15371930 aaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 7348685 - 7348559
Alignment:
Q  59 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    |||||||||||||||| ||||| |||||||||||||||||  ||||||  |||||||| | ||||||||||||| ||||| ||||||||||| || ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  159 cacgaggaccaaaagtgtaattaagcc 185  Q
    || ||||||||||| ||||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 45 - 185
Target Start/End: Complemental strand, 4623286 - 4623148
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    ||||||||||| |||||||||||  ||||| | ||||||| | ||||||||||||||||||||  ||||||| | |||||||  |||||||||| |||||    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  145 tgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  4623188 tgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 15709353 - 15709513
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||||| || |||||  | ||||| || ||||||| ||||||||||||| ||||||||| | ||||||||||||||| | ||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
     |||||||| ||| |||||| ||||||  ||||||||| | |||||||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  65 gggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgag 164  Q
    |||||||||| ||||||||||| ||||||||||| |||| |||  ||||||| | ||||||||||||| ||||| ||||||||| |  ||||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  165 gaccaaaagtgtaattaagc 184  Q
    ||||||||||||||||||||    
T  4222247 gaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 47 - 185
Target Start/End: Complemental strand, 4219800 - 4219663
Alignment:
Q  47 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||| | ||||||   |||||| | |||||||| |||| ||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    | ||  |||||||||||||| ||||||||||||||||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 47 - 179
Target Start/End: Original strand, 6019177 - 6019309
Alignment:
Q  47 tttttggagaataaaatggggggtaggatgaaaa-atgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    ||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||| || ||| |||||||| | ||||||||| ||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  146 gagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
    |||| | |||||||| || |||||||| ||||||    
T  6019277 gagt-agccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 6018452 - 6018309
Alignment:
Q  46 gtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    ||||||||||   ||||| | ||||||||  |||| ||||||||||||||||||||||| |   ||||||| | |||||||||| || ||||||||||||    
T  6018452 gtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgt 6018354  T
Q  146 gagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaa 190  Q
    ||||| | ||||||||||| ||||||| ||||||||||| |||||    
T  6018353 gagtagaacaaaacacgagaaccaaaaatgtaattaagcatttaa 6018309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 4624631 - 4624757
Alignment:
Q  46 gtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgt 145  Q
    ||||||| || |||||||||||||||||| ||||||||||||| |||||||||||||| ||  |||||||||| |||||||  | || ||||| ||||||    
T  4624631 gtttttgaaggataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgt 4624730  T
Q  146 gagtaaaccaaaacacgaggaccaaaa 172  Q
    |||||    ||||||||||||| ||||    
T  4624731 gagtaggttaaaacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 13814131 - 13814190
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaa 103  Q
    ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  13814131 tgcgtttttggaggataaaatggggg-taggacgaaaagtgcaacaaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 24325580 - 24325639
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg 68  Q
    |||||||||| || ||||||||||||||||||||||   || ||||||||||||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggagaataaaatggggg 24325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 666
Target Start/End: Original strand, 6840510 - 6840544
Alignment:
Q  632 cactacacaatgattcaactaccccatttcttctt 666  Q
    |||||||||||||||||||||||||||||||||||    
T  6840510 cactacacaatgattcaactaccccatttcttctt 6840544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 16752757 - 16752711
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggag 16752711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 14462730 - 14462686
Alignment:
Q  59 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaa 103  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 150; Significance: 7e-79; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 4969 - 4792
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 4792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 5179 - 5334
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||| ||||||||| |||||  | ||||| ||    |||| ||||||||||||||||||||||||||||  |||||||| || | ||||    
T  5179 ctaaaactgtcatttttctgcgtttctggagtttgaaaatagg----aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgtttt 5274  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||| || |||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  5275 aaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 1e-77; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 11090695 - 11090524
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||| | ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 11090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 40027316 - 40027131
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaa 194  Q
    |||||||| | ||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagccttaaataaa 40027131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  112 ttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||| |||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 239528 - 239352
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  239428 gttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 239352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 18451200 - 18451377
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
     ||||||| | |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18451377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 26538273 - 26538095
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    | |||||| | |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcctt 26538095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 22374496 - 22374319
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 22374319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 40815714 - 40815887
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40815887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 1978284 - 1978107
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||| |||||||||| |||||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagcct 1978107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 43058509 - 43058333
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | |||||||| |||||||||||||| ||||||   |||||||||||||| ||||||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||| |||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgt 8425835  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    | ||||||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||||||    
T  8425836 tctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 28616788 - 28616613
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    |||||||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  110 ttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||| | ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 26538454 - 26538625
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| ||| |  | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26538553  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    || | |||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  26538554 ttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 26538625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 9 - 179
Target Start/End: Complemental strand, 3025641 - 3025472
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaat 179  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 7446519 - 7446340
Alignment:
Q  11 catagggggtaggtctaaaa----ctgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaagga 106  Q
    ||||||||||| ||||||||    |||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||| ||    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatga 7446421  T
Q  107 ccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||||| | ||||||||||||||||||| |||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcctt 7446340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 7446730 - 7446892
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||||||||||||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||| |||||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcct 7446892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 20444890 - 20444746
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    ||||||   ||||||||||||||||||||||||||||||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaagccttt 20444746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 40815506 - 40815347
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaataaaa-tggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  ||||| | || ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 18450991 - 18450828
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || |||||||  |||||||||| ||||||||||||||||||||||||||||| | ||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 18450828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 22374709 - 22374871
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||| | |||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 22374871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 40027524 - 40027689
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| |||||| |||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 40027623  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  40027624 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccttta 40027689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 28847123 - 28847241
Alignment:
Q  68 ggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggac 167  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  168 caaaagtgtaattaagcct 186  Q
    ||||| |||||||||||||    
T  28847223 caaaaatgtaattaagcct 28847241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 35779849 - 35779708
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||  ||||||| | |||||||| |||||||||| ||||    
T  35779849 gcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttc 35779750  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||   ||||||||||||||||||||||||||||||||    
T  35779749 gtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 15551641 - 15551501
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||| ||||||||  ||||||| | |||||||| |||| ||||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15551541 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 35781067 - 35781207
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||| | ||||||||||||| ||||| ||||    
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||  |||||||||||||| |||||||||||||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 28616998 - 28617161
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || |||| || ||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 28617097  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||| ||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  28617098 aaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 28617161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 11090904 - 11091066
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||| ||||||||| |||||  | ||||| || | ||||| ||||||| |||||| |||||||||||||||||||||||||| | ||||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgtttt 11091003  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  11091004 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 44 - 186
Target Start/End: Original strand, 20440436 - 20440577
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||| |||||| ||||| ||||| ||||||||||||||||| |||| |||||||||||| | ||||||||||||||||||||||||    
T  20440436 gcgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 20440534  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||   ||||||||||||||||||||||||||||||||||    
T  20440535 gtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 20440577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 43058717 - 43058878
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||| |||||||||||||||| ||||||| | ||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 43058878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 239736 - 239896
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || |||| || |||||| |||||||||||||||||||||||||| ||||||| | ||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 26 - 185
Target Start/End: Original strand, 3025848 - 3026006
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||| |||||||||||||||||| |||||||||||||||||||||| | |||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 1978528 - 1978655
Alignment:
Q  59 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| || |||||||  ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||  ||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  159 cacgaggaccaaaagtgtaattaagcct 186  Q
    ||| ||||||||||||||||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaagcct 1978655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 8972378 - 8972239
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||| |||||||| | |||||||||||||||||||||||||||| |||  ||||||| | |||| |||||||| ||||| ||||    
T  8972378 gcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttc 8972279  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| |  |||||||||||||||||||||||||||||||    
T  8972278 gtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 14432525 - 14432684
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || |||||||||||||||||||||||||| |||||||||| ||| |||| || | ||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||| |||| |||||||||| ||||||  |||||||||||||||||||| ||||||||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||||||||||||||| ||| |||||  | ||||| || ||||||| ||||||||||||| ||||||||||||||| ||||||||||| | |||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaag-accgttttgttctgtttta 8425416  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||| || | ||||| |||||||||||  ||||||||| ||||||||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 15552459 - 15552596
Alignment:
Q  45 cgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcg 144  Q
    |||||||||||   ||||||| |||||||| ||||||| |||||||||||||||||||| |||  ||||||| | |||||||||||| ||| || |||||    
T  15552459 cgtttttggagggcaaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcg 15552557  T
Q  145 tgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||  ||||||||  | |||||||||||||||||||    
T  15552558 tgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 28143400 - 28143576
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| ||  ||||||  |||| ||||| ||| |||||| || | ||||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
     |||||||  |||| |||  |||||||||| |||||||||     |||||  ||||||||||||||| ||||||||||    
T  28143499 attttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcct 28143576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 42192736 - 42192793
Alignment:
Q  132 aggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    ||||||| ||||||||||    |||||  |||||||||||||||||||||||||||||    
T  42192736 aggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagccttta 42192793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 146; Significance: 2e-76; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 4576 - 4753
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagcct 4753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||||| |||  | ||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  124 aaaagggcaggaccagtttcgtg 146  Q
    |||||||||||||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 2e-76; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 19176659 - 19176836
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19176836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 9930026 - 9930206
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
     ||||||| |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccttta 9930206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 12572040 - 12571862
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggt-aggatgaaaaatgcaacaaaaatgataattgaaggac 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  108 cgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||| | ||||||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 12571862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 41681306 - 41681133
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgtt 111  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  112 ttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 41681133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 44831614 - 44831791
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 44831791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 33328334 - 33328156
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||| | ||||||||||||| || ||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctt 33328156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 31133396 - 31133219
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcct 31133219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 11656630 - 11656454
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgttttt-ggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccg 109  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  110 ttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||   ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11656454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaatta 181  Q
    |||||||| | ||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 9178005 - 9178180
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | |||||| |||||| || ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 13225023 - 13225190
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaat 191  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctttaat 13225190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||| | || | ||||||||  ||||||||| |||||||||||  ||||||||||| || |||||||||||||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 9929070 - 9928912
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | ||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 9928971  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  9928970 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 19176451 - 19176289
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176352  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  19176351 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19176289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 44831408 - 44831245
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||| | ||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcctt 44831245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 11656841 - 11657006
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||||| | ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccttta 11657006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 34540934 - 34541094
Alignment:
Q  27 aaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaa 125  Q
    |||||| |||||||||||||||| |  ||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  126 aagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 34541094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 12572235 - 12572393
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12572334  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  12572335 aaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 41681518 - 41681679
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||  ||||||||||||||| |||||  | ||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  41681518 ctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 41681617  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||| |||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  41681618 aaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 31133605 - 31133764
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||| ||||||||||||| ||| |||||  | ||||| || |||| || |||||||||||||||||| |||||||||||||||||||||| | |||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||||||||||||| |||||  | |||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||| ||| ||| |||||||||||||  | |||||||||||||||||||| ||||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 33743290 - 33743417
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  111 tttgttatattttaaaagggcaggacca 138  Q
    |||||| | |||||||| ||||| ||||    
T  33743390 tttgttctgttttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 33743082 - 33742921
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| | || ||||| || ||||||| |||||||||| ||||||||||||||||| |||||||| ||| | ||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 33742921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 11336959 - 11337068
Alignment:
Q  77 aaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgt 176  Q
    ||||||||||||||||||||||||||| ||||||||| || | |||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  177 aattaagcct 186  Q
    ||||||||||    
T  11337059 aattaagcct 11337068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 4629952 - 4629796
Alignment:
Q  31 ctgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagg 129  Q
    ||||||||||| ||||||| |||||  | ||||| || |||| || ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  130 gcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||| ||  |||||||||||| |  ||||||| ||||||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagcct 4629796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 10918264 - 10918129
Alignment:
Q  47 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||  ||||| | | ||||||   |||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||| | |||||||||||||| |||| |||||||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaa 10918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 8073956 - 8074098
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    ||||||||||||  ||||||||||| |  || | |||||||||||||| ||||||||||||||   ||||||| | |||||||||| || || || ||||    
T  8073956 gcgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttc 8074054  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||| ||  |||||||||||||||||||||| ||| ||||||||    
T  8074055 gtgaataggccaaaacacgaggaccaaaagtataactaagcctt 8074098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 43958326 - 43958264
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaagga 106  Q
    |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 9177793 - 9177724
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaat 93  Q
    ||||||||||||||||||| ||||| |||||  | |||||||| ||| ||||||||||||||||||||||    
T  9177793 ctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 9177699 - 9177666
Alignment:
Q  153 ccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||||||||||||||||||    
T  9177699 ccaaaacacgaggaccaaaagtgtaattaagcct 9177666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 18805337 - 18805292
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 55  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctctgtgtttctggag 18805292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 10919700 - 10919733
Alignment:
Q  154 caaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||||||||||||||||||| ||||||||||||    
T  10919700 caaaacacgaggaccaaaagtataattaagcctt 10919733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 144; Significance: 2e-75; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 11 - 186
Target Start/End: Complemental strand, 1841 - 1666
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||| | |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagcct 1666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 2051 - 2213
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 143; Significance: 1e-74; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 64478 - 64300
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||| | |||||||||| ||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcctt 64300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 64735 - 64856
Alignment:
Q  70 taggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacca 169  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  170 aaagtgtaattaagcctttaat 191  Q
    ||||||||||||| ||||||||    
T  64835 aaagtgtaattaaacctttaat 64856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 9 - 183
Target Start/End: Original strand, 205738 - 205911
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||  ||||||  |||| ||||| ||| |||||| || | ||||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    ||||||||  |||| |||  |||||||||| ||||||||||    |||||   |||||| |||||||||||||||    
T  205837 gttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 1e-74; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 9 - 187
Target Start/End: Original strand, 15523603 - 15523781
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
     ||||||| | |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcctt 15523781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 33109860 - 33109686
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 12234505 - 12234328
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcct 12234328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 46193774 - 46193953
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||||| | ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagtcttt 46193953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 9 - 199
Target Start/End: Complemental strand, 25937846 - 25937656
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaatgata 199  Q
    |||||||| | |||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||  |||||||||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcctaaaataaatgata 25937656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 11153516 - 11153692
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | |||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 25447611 - 25447782
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    || | |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagcct 25447782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 38962195 - 38962362
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 38962294  T
Q  116 tatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    | | |||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||||    
T  38962295 tctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 51020973 - 51020796
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | ||||||||||||||||||||||| |||| | | |||||||| ||||| |||||||||||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcct 51020796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 9 - 189
Target Start/End: Complemental strand, 23494619 - 23494439
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    | |||||| | ||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||||||| |||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagtcttta 23494439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 22170306 - 22170484
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    |||||||| | |||||||| ||||||| || |||||| ||||   |||||||||||||||||||||||||||||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagccttt 22170484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 22434547 - 22434718
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaat-gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| |  ||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  22434646 gttttgttct-gtttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaa 22434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 9 - 195
Target Start/End: Original strand, 2118665 - 2118850
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaat 195  Q
    |||||||||| ||||||||||  |||||||||||| |||| |  ||||||||||| |||||||||||||||||| |||||| |||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaaacctttattaaat 2118850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 45082606 - 45082435
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| |||||||||||||||  ||||| |||||||||| |||||||||||| ||||||||| ||||||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaa 45082435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 9 - 186
Target Start/End: Complemental strand, 48526371 - 48526195
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | ||||||||||||||  |||||||| ||||||   ||||||||||| |||||||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 54995437 - 54995609
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| ||||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 54995609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Complemental strand, 22434340 - 22434179
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| | ||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 45082808 - 45082969
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| | |||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 25447408 - 25447241
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| |||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaat 191  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| |||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccattaat 25447241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 46193568 - 46193405
Alignment:
Q  23 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatt 121  Q
    ||||||||||||||||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  122 ttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 48526565 - 48526731
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||||||||||||| |||| |||||  | ||||| || ||||||| |||||||||||||||| |||||||||||||||||||||||| | ||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaa 190  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaaacctttaa 48526731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 15523395 - 15523234
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||||||||||||||||||| | |||  | ||||| || ||||||| ||||||||||| |||||| |||||||||||||||||||||| | |||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15523234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 23494872 - 23494989
Alignment:
Q  69 gtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc 168  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  169 aaaagtgtaattaagcct 186  Q
    ||||||||||||||||||    
T  23494972 aaaagtgtaattaagcct 23494989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 11153307 - 11153143
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||||||| ||| |  | ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttt 188  Q
    ||||||||| ||||| ||| |||||||  |||||||||||||||||||||| |||||||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagccttt 11153143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 12503805 - 12503912
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  109 gttttgtt 116  Q
    ||||||||    
T  12503905 gttttgtt 12503912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 20470895 - 20471057
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||| |||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||| | |||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 20471057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 12234713 - 12234874
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||||| ||| ||| |  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12234812  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||| || ||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  12234813 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 2118454 - 2118282
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| || ||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  2118454 ctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgtttt 2118355  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaataaatg 196  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| ||||||| ||||    
T  2118354 aaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagtctttaatcaatg 2118282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 44 - 192
Target Start/End: Complemental strand, 48293735 - 48293587
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||  ||||||| | |||||||  | ||||| || ||||    
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttc 48293636  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctttaata 192  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaagcctataata 48293587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 33109883 - 33110010
Alignment:
Q  59 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |  ||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  159 cacgaggaccaaaagtgtaattaagcct 186  Q
    || |||||||||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagcct 33110010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 4219943 - 4220101
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||| ||||||||||||||||| ||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||| | ||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||| |||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4220101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 54995230 - 54995072
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 54995131  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||| ||||| |||||||||||||  |||| |||||||||||||||||||||||||    
T  54995130 aaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaa 54995072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 25938056 - 25938220
Alignment:
Q  26 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttta 124  Q
    |||||||| ||||||| || |||| |||||  | ||||| || |||||||  ||||||||||||||||||||||||||||||| |||||||| | |||||    
T  25938056 taaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtttta 25938155  T
Q  125 aaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    |||||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  25938156 aaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagccttta 25938220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 51021180 - 51021341
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||| || ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||| |||||||| ||||||||||||||| | ||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgtttt 51021278  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||||||||||||| |||||||||||  |||||||||||||| |||||||||||||||||||    
T  51021279 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 51021341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 18751760 - 18751597
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    ||||||||| ||||| ||||||||| |||||  | ||||| || ||| ||| |||||||||||||||||||||| |||||||||||||||||| | ||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgtttt 18751661  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||||||||| |||||||||  ||||||  |||||||||||||||||||||||||||||| ||||    
T  18751660 aaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaaacctt 18751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 20958264 - 20958403
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||   |||||| | ||||||||||||||||||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||  |||||| |||||||| ||||||||||||||||    
T  20958362 cgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 16691072 - 16690932
Alignment:
Q  49 tttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||   ||||||| | |||||||  |||||||||| |||||||||    
T  16691072 tttggaggataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgag 16690973  T
Q  149 taaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    || | |||||||| |||||||||| ||||||||| ||||||    
T  16690972 tagatcaaaacacaaggaccaaaaatgtaattaaaccttta 16690932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 48708431 - 48708294
Alignment:
Q  49 tttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||| | |||||||| | ||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| || |||||||      
T  48708431 tttggaggataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggt 48708332  T
Q  149 taaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||  |||||||||  |||||||||||||||||||||||    
T  48708331 taggccaaaacacatggaccaaaagtgtaattaagcct 48708294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 25 - 168
Target Start/End: Complemental strand, 12503597 - 12503453
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||  ||||||| | ||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc 168  Q
    |||| ||| ||| |||||||||||||||  |||||||||||||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 18763951 - 18764063
Alignment:
Q  71 aggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaa 170  Q
    |||| |||||||||||||||||||||| ||||| |||| ||||||| | |||||||||| || |||||||||||||||||  ||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  171 aagtgtaattaag 183  Q
    |||||||||||||    
T  18764051 aagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 44892552 - 44892692
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||||  ||||||||| ||| |||||||| | |||||||| ||||| |||| ||||    
T  44892552 gcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttc 44892651  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||||||   ||||||||||||||||||| | |||||||||    
T  44892652 gtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 35363036 - 35363146
Alignment:
Q  76 gaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt-aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagt 174  Q
    |||||||||||||||||||||||||||| |||||||||||| | |||| ||||| |||| ||||||||||||||||  |||||||||||||| |||||||    
T  35363036 gaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggatcaaaagt 35363135  T
Q  175 gtaattaagcc 185  Q
    |||||||||||    
T  35363136 gtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 48294946 - 48295088
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatg-aaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    |||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||| |||  ||||||| | |||||||  |||| ||||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||| | |||||||||| |||||||| ||||||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 47 - 178
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  47 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||| ||||||||||||||| ||| || |||||||||||||||| |||||||||||||||  ||||||| | ||||||||| | | ||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  147 agtaaaccaaaacacgaggaccaaaagtgtaa 178  Q
    ||||| ||||||| |||||||||||| |||||    
T  20957227 agtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 44 - 167
Target Start/End: Original strand, 43243685 - 43243807
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||| ||  ||||||| | ||||||||||||| ||||| ||||    
T  43243685 gcgtttttggaggataaaatggggg-taggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  144 gtgagtaaaccaaaacacgaggac 167  Q
    |||||||  |||||||||||||||    
T  43243784 gtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 48713749 - 48713888
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||||  ||||||| | ||||||||| ||| ||||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    | ||||||  | |||||||||| |  ||||||||||||||    
T  48713849 catgagtaggctaaaacacgagaattaaaagtgtaattaa 48713888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 44890658 - 44890518
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||  |||||| |||||   ||||||| | ||||||||||||| ||||| ||||    
T  44890658 gcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttc 44890559  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    |||| ||   |||||||| |||||||||| |||||||||||    
T  44890558 gtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 43281198 - 43281317
Alignment:
Q  47 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtg 146  Q
    ||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||  ||||||| | |||||||| |||| ||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  147 agtaaaccaaaacacgaggac 167  Q
    ||||  |||||||||||||||    
T  43281297 agtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 10258306 - 10258434
Alignment:
Q  59 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| ||||||| ||  |||| ||||||||||||||||||||||  ||  ||||  | | ||||||||||||||||||| |||| ||||||  ||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  159 cacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||||||||||||||||||||||||    
T  10258406 cacgaggaccaaaagtgtaattaagcctt 10258434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 49 - 185
Target Start/End: Original strand, 16691481 - 16691616
Alignment:
Q  49 tttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgag 148  Q
    ||||||| |||||||||| |||| || |||||||||||||||||| |||||| ||||||  |||||||||  ||||||  |||||||||| |||||||||    
T  16691481 tttggaggataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttat-gtttaaagaggcaggaccattttcgtgag 16691579  T
Q  149 taaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||   ||||||||  ||| ||||||||||||||||||    
T  16691580 taggtcaaaacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18751971 - 18752036
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtagga 74  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtagga 18752036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 16318256 - 16318323
Alignment:
Q  120 ttttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  16318256 ttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctt 16318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 43242411 - 43242328
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaa 127  Q
    |||||||||||  ||||||| || ||||||| ||||||||||| |||||||||||||||| |||||||||||| | ||||||||    
T  43242411 gcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 17504149 - 17503972
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||   ||||| || |||||||  |||| ||||| ||| |||||| ||  |||||     
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacg 17504051  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    ||| ||||  |||| |||  |||||||||| |||||||||     |||||  |||||||||| ||| ||||||||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagcctt 17503972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 195
Target Start/End: Complemental strand, 55189636 - 55189518
Alignment:
Q  77 aaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgt 176  Q
    ||||||| | ||||||||||||||||| |||  ||||||| |||||||||||||||  |||| |||  ||| ||   ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  177 aattaagcctttaataaat 195  Q
    ||||||||| ||| |||||    
T  55189536 aattaagccattattaaat 55189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 44220781 - 44220853
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt 116  Q
    |||||||||||| |||||||  ||||||| | |||||||| |||||||||||||| ||||||||  |||||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgtt 44220853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctc 42  Q
    ||||||||||||||||||||||||||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 35193766 - 35193849
Alignment:
Q  103 aggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    ||||| ||||||||| |||| |||  |||||||||| |||||||||   | |||||  | ||||||||||||||||||||||||    
T  35193766 aggacggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagcct 35193849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 30596388 - 30596342
Alignment:
Q  47 tttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaat 93  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||||    
T  30596388 tttttggaggataaaatgggggttaggatcaaaagtgcaacaaaaat 30596342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 138; Significance: 9e-72; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 134042 - 134219
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | | ||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 134219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 127; Significance: 3e-65; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 9 - 183
Target Start/End: Complemental strand, 928 - 755
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 183  Q
    |||||||| | ||||||||||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 1116 - 1286
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    ||||| |||||||||||| ||||| ||||||||| ||| |  | ||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttg 1215  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    || | |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  1216 ttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 127; Significance: 3e-65; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 42528 - 42704
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||||| | |||||||||||||| | ||||||| |||||| |||||||||||||| |||||||| |||||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcct 42704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 42339 - 42167
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttg 114  Q
    |||||||||||||||||||||||||||||||||| || ||  | ||||| || |||| ||  ||||||||||||||||||||||||||| ||||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttg 42240  T
Q  115 ttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcctt 187  Q
    || | |||||||| ||||||| ||||||||||| || ||||||||||||| || |||||||||||||| ||||    
T  42239 ttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaaacctt 42167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 126; Significance: 1e-64; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    |||||||| | ||||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 10057 - 9935
Alignment:
Q  59 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||| || ||||||||||||| || ||||||| |||||||||||||||| ||||||| ||| ||||||||||| || ||||||||||| ||  | ||||    
T  10057 aaaataggaggtaggatgaaaa-tgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaa 9959  T
Q  159 cacgaggaccaaaagtgtaattaa 182  Q
    |||||||||||||| |||||||||    
T  9958 cacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 19001 - 18831
Alignment:
Q  18 ggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgtta 117  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgtta 18903  T
Q  118 tattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagccttta 189  Q
    | ||||||||||||| |||||||||||||||||  ||||||||  ||||||||||||||||| |||||||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagccttta 18831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 19069 - 19166
Alignment:
Q  88 aaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 10797 - 10640
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  109 gttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgagga 166  Q
    |||||||| | |||||||||||||||||||||||| ||||||  ||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 11007 - 11168
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||  |||||||||||||| | |||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11007 ctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 11106  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcc 185  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  11107 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 96; Significance: 1e-46; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 16672 - 16565
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  109 gttttgtt 116  Q
    ||||||||    
T  16572 gttttgtt 16565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 16880 - 17024
Alignment:
Q  25 ctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatatttt 123  Q
    |||||||||| |||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||  ||||||| | ||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  124 aaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggacc 168  Q
    |||| ||| ||| |||||||||||||||  |||||||||||||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 28662 - 28791
Alignment:
Q  59 aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaa 158  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||| |||||||||||| ||||  ||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  159 cacgaggaccaaaagtgtaattaagccttt 188  Q
    ||||| ||||||||||||||||| ||||||    
T  28762 cacgatgaccaaaagtgtaattatgccttt 28791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 61862 - 62000
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||||||| | |||||||||||||||| |||||||  ||||||||||||| ||||| ||   ||||||| ||||||||||||| ||||||| ||||    
T  61862 gcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttc 61961  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaattaa 182  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  61962 gtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 61102 - 61027
Alignment:
Q  111 tttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagcct 186  Q
    |||||| |||||||||| ||||||| || |||||||||||  |||||||||||||| |||||||||| ||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagcct 61027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 43 - 184
Target Start/End: Complemental strand, 709 - 568
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagttt 142  Q
    ||||||||||||| || ||||||| |||  || ||||||| |||||||||||||||||||||||| |||||||| | ||||||||||||| || || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  143 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaagc 184  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  609 cgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  82 tgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttcgtgagtaaaccaaaacacgaggaccaaaagtgtaatta 181  Q
    ||||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||| |||| ||||||||| || |||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  182 a 182  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 589 - 454
Alignment:
Q  44 gcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggaccagtttc 143  Q
    |||||||| ||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||  || |||| | |||||||||  || ||||| ||||    
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  144 gtgagtaaaccaaaacacgaggaccaaaagtgtaatta 181  Q
    |||||||  ||||||||||| |||||||| ||||||||    
T  490 gtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 7691 - 7784
Alignment:
Q  43 tgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatattttaaaagggcaggac 136  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||| ||| |||||||| | ||||||||||| |||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 2771 times since January 2019
Visitors: 3829