View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0572_low_21 (Length: 292)
Name: NF0572_low_21
Description: NF0572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0572_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 30256834 - 30256666
Alignment:
| Q |
71 |
gtaatggtctaatcaggcctcgctgatagccacaatctaaagcagatgaaggattaacaccatccaaaacactagaaacatccaccacttcaataagata |
170 |
Q |
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| T |
30256834 |
gtaatggtctaatcaggcctcgctgatagctacaatctaaagcagatgaagaattaacaccatccaaaacactagaaacatccaccacttcaataagata |
30256735 |
T |
|
| Q |
171 |
atctgattcttcatcatcaagaatattttcgtatttgacataacacatcttcctcccgcagcggagaat |
239 |
Q |
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||| ||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||| |
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| T |
30256734 |
atccgattcttcatcatcaagaatattgtcgtatttgacataacgcgtcttcctcccgcagcggagaat |
30256666 |
T |
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