View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0572_low_30 (Length: 250)

Name: NF0572_low_30
Description: NF0572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0572_low_30
NF0572_low_30
[»] chr1 (30 HSPs)
chr1 (1-115)||(50209757-50209871)
chr1 (1-107)||(22354123-22354229)
chr1 (1-117)||(22355726-22355842)
chr1 (1-117)||(27250281-27250397)
chr1 (1-115)||(21301081-21301195)
chr1 (1-106)||(433471-433576)
chr1 (1-107)||(34510244-34510350)
chr1 (1-117)||(21027133-21027249)
chr1 (1-115)||(20135651-20135766)
chr1 (4-107)||(22532736-22532839)
chr1 (1-117)||(20846771-20846887)
chr1 (1-111)||(20919065-20919175)
chr1 (1-85)||(22357444-22357528)
chr1 (1-105)||(38800955-38801059)
chr1 (1-106)||(20091026-20091131)
chr1 (34-115)||(20228364-20228445)
chr1 (1-111)||(22468243-22468354)
chr1 (1-105)||(33681473-33681578)
chr1 (1-107)||(22921418-22921524)
chr1 (3-53)||(21162194-21162244)
chr1 (71-105)||(21754577-21754611)
chr1 (1-107)||(43697824-43697930)
chr1 (34-115)||(33798003-33798084)
chr1 (34-104)||(20248774-20248845)
chr1 (68-107)||(35260629-35260668)
chr1 (11-105)||(45307764-45307859)
chr1 (33-107)||(20637347-20637421)
chr1 (65-106)||(26065520-26065561)
chr1 (76-105)||(42864764-42864793)
chr1 (37-85)||(35981260-35981308)
[»] chr8 (37 HSPs)
chr8 (1-115)||(18817953-18818067)
chr8 (1-115)||(18878780-18878894)
chr8 (1-115)||(19800970-19801084)
chr8 (1-115)||(20536672-20536786)
chr8 (1-115)||(23406845-23406959)
chr8 (1-107)||(21923479-21923585)
chr8 (1-111)||(16091888-16091998)
chr8 (1-107)||(28648595-28648701)
chr8 (1-105)||(5865830-5865934)
chr8 (1-105)||(31971708-31971812)
chr8 (1-105)||(41598648-41598752)
chr8 (1-107)||(22875529-22875635)
chr8 (4-105)||(45130584-45130685)
chr8 (1-101)||(17141377-17141477)
chr8 (1-105)||(21249845-21249949)
chr8 (1-107)||(6759721-6759827)
chr8 (1-107)||(22627199-22627305)
chr8 (1-105)||(21255683-21255787)
chr8 (1-105)||(21918563-21918667)
chr8 (1-96)||(16199220-16199315)
chr8 (1-115)||(7373213-7373328)
chr8 (1-115)||(23649017-23649131)
chr8 (1-105)||(21389005-21389110)
chr8 (34-107)||(21860063-21860136)
chr8 (1-94)||(21491456-21491549)
chr8 (34-107)||(21286718-21286791)
chr8 (6-105)||(21395529-21395629)
chr8 (6-105)||(21790022-21790122)
chr8 (1-105)||(26355250-26355355)
chr8 (34-105)||(23760392-23760464)
chr8 (33-111)||(6520864-6520942)
chr8 (1-105)||(21674169-21674274)
chr8 (64-105)||(22526099-22526140)
chr8 (32-105)||(37115978-37116051)
chr8 (64-105)||(17438982-17439023)
chr8 (64-105)||(22365266-22365307)
chr8 (37-85)||(5610211-5610259)
[»] chr7 (35 HSPs)
chr7 (1-115)||(12699296-12699410)
chr7 (1-115)||(9509653-9509767)
chr7 (1-107)||(38227944-38228050)
chr7 (1-115)||(39267189-39267303)
chr7 (1-115)||(9751093-9751207)
chr7 (1-107)||(3563915-3564021)
chr7 (1-114)||(26212449-26212562)
chr7 (1-105)||(27847397-27847501)
chr7 (1-115)||(18302642-18302756)
chr7 (1-117)||(11995599-11995715)
chr7 (1-105)||(34201247-34201351)
chr7 (153-239)||(10866051-10866135)
chr7 (1-117)||(15754428-15754544)
chr7 (1-117)||(40443841-40443957)
chr7 (6-104)||(15143590-15143688)
chr7 (1-104)||(16385812-16385915)
chr7 (1-105)||(810681-810786)
chr7 (1-105)||(19649037-19649142)
chr7 (1-62)||(28504897-28504958)
chr7 (1-106)||(12756268-12756374)
chr7 (1-59)||(2831905-2831963)
chr7 (11-102)||(21064717-21064809)
chr7 (34-107)||(16219267-16219340)
chr7 (1-105)||(24054930-24055035)
chr7 (34-105)||(44117001-44117073)
chr7 (33-107)||(47832304-47832378)
chr7 (1-105)||(68210-68315)
chr7 (1-105)||(11880714-11880819)
chr7 (66-105)||(9703772-9703811)
chr7 (66-107)||(9389267-9389308)
chr7 (1-105)||(18006105-18006210)
chr7 (1-105)||(44014638-44014743)
chr7 (11-105)||(4993960-4994055)
chr7 (1-105)||(3272249-3272354)
chr7 (66-107)||(17061532-17061573)
[»] chr6 (39 HSPs)
chr6 (1-115)||(22779770-22779884)
chr6 (1-115)||(17287339-17287453)
chr6 (1-115)||(27415497-27415611)
chr6 (1-117)||(20637835-20637951)
chr6 (1-107)||(28496024-28496130)
chr6 (1-107)||(29808434-29808540)
chr6 (1-115)||(21939847-21939961)
chr6 (1-117)||(1561767-1561883)
chr6 (1-105)||(16920197-16920301)
chr6 (1-107)||(18409378-18409484)
chr6 (1-107)||(19303092-19303198)
chr6 (1-105)||(22439263-22439368)
chr6 (1-115)||(1645142-1645256)
chr6 (1-107)||(18457178-18457285)
chr6 (1-110)||(25602932-25603042)
chr6 (1-107)||(25628906-25629012)
chr6 (1-105)||(19863441-19863546)
chr6 (1-105)||(22831955-22832060)
chr6 (1-107)||(15893981-15894087)
chr6 (1-61)||(22334479-22334539)
chr6 (34-107)||(22080287-22080361)
chr6 (3-105)||(31154950-31155053)
chr6 (1-107)||(25956172-25956278)
chr6 (1-105)||(22432713-22432818)
chr6 (34-107)||(23019904-23019977)
chr6 (1-53)||(20594237-20594289)
chr6 (1-104)||(25641737-25641841)
chr6 (3-105)||(4185375-4185478)
chr6 (1-105)||(18180950-18181055)
chr6 (1-105)||(31164410-31164515)
chr6 (3-101)||(4667769-4667868)
chr6 (3-101)||(4674616-4674715)
chr6 (74-107)||(15539816-15539849)
chr6 (64-105)||(18230771-18230812)
chr6 (64-105)||(18231153-18231194)
chr6 (1-105)||(19652659-19652764)
chr6 (64-105)||(20224546-20224587)
chr6 (64-105)||(22118530-22118571)
chr6 (71-107)||(20594286-20594322)
[»] chr4 (39 HSPs)
chr4 (1-115)||(22636898-22637012)
chr4 (1-115)||(44053293-44053407)
chr4 (1-117)||(12903209-12903325)
chr4 (1-117)||(16239533-16239649)
chr4 (1-107)||(20156841-20156947)
chr4 (1-117)||(7089330-7089446)
chr4 (1-105)||(3097096-3097200)
chr4 (1-115)||(24029205-24029319)
chr4 (3-115)||(3332284-3332396)
chr4 (1-107)||(15091361-15091467)
chr4 (1-105)||(15552277-15552382)
chr4 (1-115)||(22633756-22633870)
chr4 (1-105)||(17053495-17053599)
chr4 (1-107)||(16377073-16377179)
chr4 (1-107)||(44928474-44928580)
chr4 (1-103)||(14052869-14052970)
chr4 (1-107)||(44102673-44102780)
chr4 (1-107)||(12774462-12774569)
chr4 (1-85)||(14039113-14039197)
chr4 (4-117)||(16597112-16597225)
chr4 (1-107)||(21815182-21815289)
chr4 (1-107)||(6190897-6191004)
chr4 (1-107)||(21818275-21818382)
chr4 (1-59)||(13812408-13812466)
chr4 (33-107)||(39705839-39705913)
chr4 (1-61)||(7799161-7799222)
chr4 (34-107)||(43198139-43198212)
chr4 (71-115)||(7799210-7799254)
chr4 (74-117)||(23374074-23374117)
chr4 (12-105)||(46639925-46640018)
chr4 (1-105)||(13569973-13570078)
chr4 (1-105)||(23843940-23844045)
chr4 (1-105)||(44676093-44676198)
chr4 (66-105)||(10314244-10314283)
chr4 (1-107)||(13845003-13845109)
chr4 (72-105)||(8846889-8846922)
chr4 (1-105)||(15121356-15121461)
chr4 (64-105)||(53081652-53081693)
chr4 (65-105)||(12287686-12287726)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-117)||(13664-13780)
[»] chr3 (54 HSPs)
chr3 (2-117)||(13442717-13442832)
chr3 (1-112)||(20697993-20698104)
chr3 (1-107)||(26687351-26687457)
chr3 (3-115)||(17499805-17499917)
chr3 (1-115)||(11424306-11424420)
chr3 (1-107)||(17247837-17247943)
chr3 (3-115)||(17488323-17488435)
chr3 (1-107)||(14666069-14666175)
chr3 (1-107)||(14735582-14735688)
chr3 (1-107)||(25475936-25476042)
chr3 (15-115)||(184318-184418)
chr3 (1-107)||(53070249-53070356)
chr3 (1-107)||(18438998-18439104)
chr3 (1-107)||(23082912-23083018)
chr3 (1-115)||(43842642-43842756)
chr3 (1-114)||(12851908-12852021)
chr3 (1-117)||(13209869-13209985)
chr3 (1-105)||(14179786-14179890)
chr3 (1-107)||(14973318-14973424)
chr3 (1-104)||(40213275-40213378)
chr3 (1-115)||(30030292-30030406)
chr3 (1-105)||(16809849-16809953)
chr3 (1-115)||(12399659-12399772)
chr3 (1-105)||(14576386-14576490)
chr3 (1-81)||(14669224-14669304)
chr3 (1-105)||(14573052-14573156)
chr3 (1-111)||(12933856-12933967)
chr3 (1-111)||(23408892-23409003)
chr3 (1-105)||(12340216-12340321)
chr3 (1-105)||(15877381-15877486)
chr3 (34-105)||(9513407-9513479)
chr3 (34-105)||(9521382-9521454)
chr3 (43-107)||(17247084-17247148)
chr3 (34-105)||(4588368-4588439)
chr3 (34-105)||(42386908-42386979)
chr3 (1-105)||(1644235-1644340)
chr3 (1-107)||(16104244-16104351)
chr3 (1-110)||(15471388-15471497)
chr3 (1-104)||(49389197-49389301)
chr3 (35-111)||(14234988-14235064)
chr3 (47-107)||(14669367-14669427)
chr3 (12-105)||(21837983-21838076)
chr3 (1-105)||(16097794-16097899)
chr3 (1-105)||(49667636-49667741)
chr3 (12-105)||(43927663-43927756)
chr3 (1-105)||(17524727-17524832)
chr3 (32-104)||(22109830-22109903)
chr3 (34-107)||(52523279-52523351)
chr3 (34-105)||(12171669-12171741)
chr3 (54-105)||(32308186-32308237)
chr3 (76-105)||(321567-321596)
chr3 (153-201)||(379353-379404)
chr3 (34-107)||(2050753-2050825)
chr3 (37-85)||(22791798-22791846)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-115)||(20867-20981)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-107)||(40375-40481)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-115)||(2315-2429)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-111)||(339498-339608)
scaffold0003 (1-115)||(71750-71864)
[»] chr5 (36 HSPs)
chr5 (1-115)||(23390039-23390153)
chr5 (1-115)||(25421996-25422110)
chr5 (1-107)||(1096931-1097037)
chr5 (1-107)||(20910363-20910469)
chr5 (1-115)||(22119736-22119850)
chr5 (1-107)||(24494032-24494138)
chr5 (1-105)||(21985700-21985804)
chr5 (1-115)||(25431858-25431972)
chr5 (1-117)||(22075472-22075588)
chr5 (1-103)||(9078416-9078518)
chr5 (1-115)||(21871114-21871228)
chr5 (1-115)||(21875394-21875508)
chr5 (1-115)||(19660380-19660494)
chr5 (1-103)||(24529685-24529787)
chr5 (1-107)||(11580795-11580902)
chr5 (1-105)||(22106937-22107041)
chr5 (1-107)||(29916592-29916699)
chr5 (1-59)||(8286452-8286510)
chr5 (1-115)||(24766885-24766994)
chr5 (34-115)||(21498560-21498641)
chr5 (1-105)||(23201830-23201935)
chr5 (1-105)||(37724365-37724470)
chr5 (34-107)||(21329046-21329119)
chr5 (1-105)||(31342564-31342669)
chr5 (1-57)||(13095958-13096014)
chr5 (76-111)||(8286422-8286457)
chr5 (66-116)||(22144578-22144628)
chr5 (1-105)||(22959085-22959190)
chr5 (1-105)||(14079609-14079714)
chr5 (34-107)||(26011585-26011658)
chr5 (66-107)||(36154400-36154441)
chr5 (1-57)||(13025774-13025830)
chr5 (1-87)||(19669364-19669451)
chr5 (37-85)||(21741116-21741164)
chr5 (14-105)||(22177696-22177787)
chr5 (1-53)||(26742363-26742415)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-118)||(600-717)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-118)||(167530-167647)
scaffold0011 (1-115)||(52376-52490)
[»] scaffold0292 (3 HSPs)
scaffold0292 (1-115)||(806-920)
scaffold0292 (1-52)||(3934-3985)
scaffold0292 (75-115)||(3987-4027)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-115)||(125046-125160)
scaffold0021 (1-105)||(175228-175333)
scaffold0021 (1-105)||(63025-63130)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-117)||(5662-5778)
[»] chr2 (28 HSPs)
chr2 (1-117)||(23286314-23286430)
chr2 (1-117)||(23653951-23654067)
chr2 (1-107)||(23660486-23660592)
chr2 (1-115)||(27754039-27754153)
chr2 (1-103)||(28291857-28291959)
chr2 (1-103)||(298369-298472)
chr2 (9-115)||(23076912-23077016)
chr2 (24-115)||(23060817-23060908)
chr2 (1-105)||(20309558-20309662)
chr2 (1-107)||(22337579-22337685)
chr2 (1-115)||(22730776-22730890)
chr2 (1-103)||(22737735-22737837)
chr2 (1-107)||(32451479-32451586)
chr2 (2-105)||(37680-37783)
chr2 (1-103)||(23100785-23100888)
chr2 (1-105)||(22740513-22740618)
chr2 (34-105)||(40621762-40621833)
chr2 (1-105)||(22758268-22758373)
chr2 (33-107)||(7679792-7679866)
chr2 (34-105)||(22133769-22133841)
chr2 (1-113)||(24658101-24658213)
chr2 (46-104)||(23038541-23038599)
chr2 (65-106)||(20519670-20519711)
chr2 (75-104)||(22798680-22798709)
chr2 (36-105)||(25176341-25176410)
chr2 (71-107)||(22412612-22412648)
chr2 (1-104)||(22811488-22811592)
chr2 (47-107)||(23705830-23705890)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-112)||(15161-15272)
[»] scaffold2044 (1 HSPs)
scaffold2044 (1-115)||(999-1113)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-115)||(1621-1735)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-107)||(17559-17665)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-115)||(13556-13670)
scaffold0175 (1-105)||(34584-34688)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-111)||(21354-21464)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-115)||(19969-20083)
scaffold0031 (1-105)||(65346-65451)
[»] scaffold0266 (1 HSPs)
scaffold0266 (3-107)||(18509-18613)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-116)||(13150-13265)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-104)||(389-492)
scaffold0358 (1-104)||(5165-5268)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-112)||(16761-16872)
scaffold0056 (1-115)||(78905-79019)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-107)||(368-474)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-115)||(556-670)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-111)||(4972-5082)
scaffold0228 (1-111)||(12554-12664)
scaffold0228 (1-111)||(22506-22616)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-115)||(25608-25722)
scaffold0122 (1-104)||(33048-33151)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-111)||(10622-10732)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-115)||(24193-24308)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-104)||(23856-23959)
[»] scaffold0395 (2 HSPs)
scaffold0395 (1-107)||(513-619)
scaffold0395 (1-105)||(8044-8149)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-115)||(39474-39588)
scaffold0026 (1-103)||(40320-40422)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-105)||(4695-4799)
[»] scaffold0247 (1 HSPs)
scaffold0247 (3-115)||(6371-6483)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-117)||(14941-15057)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-84)||(8939-9022)
[»] scaffold0347 (1 HSPs)
scaffold0347 (4-115)||(494-605)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-104)||(10608-10711)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-107)||(2636-2742)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-115)||(8076-8190)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-103)||(79887-79989)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-117)||(2405-2521)
[»] scaffold0351 (2 HSPs)
scaffold0351 (1-105)||(16732-16836)
scaffold0351 (75-105)||(16881-16911)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-117)||(16122-16238)
scaffold0261 (1-105)||(1801-1906)
[»] scaffold0120 (3 HSPs)
scaffold0120 (2-112)||(46390-46500)
scaffold0120 (2-107)||(32510-32615)
scaffold0120 (1-107)||(16550-16656)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-107)||(20576-20682)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-107)||(4987-5093)
[»] scaffold0456 (1 HSPs)
scaffold0456 (4-105)||(9990-10091)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-105)||(616-720)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-104)||(13948-14051)
[»] scaffold0346 (1 HSPs)
scaffold0346 (1-115)||(17267-17381)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-115)||(10374-10488)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-107)||(14981-15087)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-105)||(10825-10929)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-117)||(5301-5417)
[»] scaffold0221 (1 HSPs)
scaffold0221 (3-107)||(12360-12464)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-117)||(1986-2102)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-105)||(47439-47543)
[»] scaffold1992 (1 HSPs)
scaffold1992 (1-117)||(256-373)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-107)||(16150-16256)
[»] scaffold0218 (2 HSPs)
scaffold0218 (5-117)||(28821-28933)
scaffold0218 (38-107)||(7572-7641)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-107)||(17244-17351)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-105)||(15029-15133)
scaffold0114 (1-105)||(32829-32933)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-117)||(32517-32633)
[»] scaffold0364 (1 HSPs)
scaffold0364 (34-107)||(17171-17244)
[»] scaffold0145 (1 HSPs)
scaffold0145 (7-118)||(39229-39330)
[»] scaffold0555 (2 HSPs)
scaffold0555 (1-104)||(1043-1146)
scaffold0555 (34-117)||(10108-10192)
[»] scaffold0106 (3 HSPs)
scaffold0106 (6-105)||(1744-1844)
scaffold0106 (6-105)||(7721-7821)
scaffold0106 (4-102)||(16114-16213)
[»] scaffold0628 (1 HSPs)
scaffold0628 (34-108)||(2353-2427)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-107)||(7063-7168)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-107)||(190833-190939)
scaffold0017 (1-107)||(192536-192642)
[»] scaffold0503 (1 HSPs)
scaffold0503 (4-107)||(12395-12499)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-105)||(28361-28466)
[»] scaffold0130 (1 HSPs)
scaffold0130 (2-55)||(29001-29054)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-62)||(7890-7951)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-105)||(70257-70362)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-103)||(51438-51541)
scaffold0034 (34-107)||(33033-33105)
[»] scaffold1137 (1 HSPs)
scaffold1137 (34-105)||(1854-1925)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-107)||(3396-3503)
[»] scaffold0621 (1 HSPs)
scaffold0621 (1-103)||(7000-7103)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-105)||(2196-2301)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-115)||(35935-36049)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-115)||(9382-9491)
[»] scaffold0059 (1 HSPs)
scaffold0059 (53-115)||(19308-19370)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-103)||(7275-7378)
scaffold0556 (34-107)||(8513-8586)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-107)||(19730-19837)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-107)||(101858-101965)
[»] scaffold0028 (1 HSPs)
scaffold0028 (51-105)||(1-55)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-98)||(130371-130469)
[»] scaffold1895 (1 HSPs)
scaffold1895 (9-62)||(1-54)
[»] scaffold1257 (1 HSPs)
scaffold1257 (34-107)||(1850-1923)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-105)||(15862-15967)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-105)||(16674-16779)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-105)||(52032-52136)
[»] scaffold0476 (1 HSPs)
scaffold0476 (33-105)||(8297-8369)
[»] scaffold0138 (3 HSPs)
scaffold0138 (47-107)||(13450-13510)
scaffold0138 (1-105)||(29771-29876)
scaffold0138 (1-105)||(41767-41872)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-111)||(161149-161260)
[»] scaffold0507 (1 HSPs)
scaffold0507 (37-107)||(7608-7678)
[»] scaffold0078 (1 HSPs)
scaffold0078 (37-107)||(11028-11098)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-105)||(8510-8615)
[»] scaffold0022 (1 HSPs)
scaffold0022 (64-105)||(80863-80904)
[»] scaffold1984 (1 HSPs)
scaffold1984 (4-104)||(597-697)
[»] scaffold0149 (2 HSPs)
scaffold0149 (2-105)||(4181-4285)
scaffold0149 (2-105)||(8612-8716)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-105)||(36919-37023)
[»] scaffold0475 (1 HSPs)
scaffold0475 (3-101)||(9542-9641)
[»] scaffold0333 (2 HSPs)
scaffold0333 (33-104)||(7109-7180)
scaffold0333 (33-104)||(14489-14560)
[»] scaffold0273 (1 HSPs)
scaffold0273 (47-110)||(8986-9049)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-44)||(20444-20487)
[»] scaffold0210 (2 HSPs)
scaffold0210 (75-105)||(21359-21389)
scaffold0210 (75-105)||(29251-29281)
[»] scaffold0040 (1 HSPs)
scaffold0040 (65-107)||(103136-103178)
[»] scaffold0020 (2 HSPs)
scaffold0020 (33-99)||(15389-15455)
scaffold0020 (45-105)||(179157-179217)
[»] scaffold0530 (1 HSPs)
scaffold0530 (33-110)||(576-653)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-105)||(18006-18111)
[»] scaffold0357 (1 HSPs)
scaffold0357 (32-103)||(3264-3335)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 50209871 - 50209757
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  50209871 aactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactcgcg 50209772  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  50209771 aggcggggaaaggtt 50209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22354229 - 22354123
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  22354229 aactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgtgacgtgcaactcgcg 22354130  T
Q  101 aggcggg 107  Q
    |||||||    
T  22354129 aggcggg 22354123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22355842 - 22355726
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |  |||||||||||  |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  22355842 aactcaaaagtcaaaattatgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 22355743  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||||||||    
T  22355742 aggcggggaaaggttac 22355726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27250397 - 27250281
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  27250397 aactcaaaagtcaatattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 27250298  T
Q  101 aggcggggaaaggttac 117  Q
    || |||||||| |||||    
T  27250297 agacggggaaaagttac 27250281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 21301195 - 21301081
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| ||    
T  21301195 aactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactcacg 21301096  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  21301095 aggcggggaaaggtt 21301081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 433471 - 433576
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||||  |||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  433471 aactcaaaagtcaaaatcacggaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 433570  T
Q  101 aggcgg 106  Q
    ||||||    
T  433571 aggcgg 433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 34510244 - 34510350
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||| || | ||||||||||||| | ||||||||||||    
T  34510244 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcaaggtgcaactcgcg 34510343  T
Q  101 aggcggg 107  Q
    |||||||    
T  34510344 aggcggg 34510350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21027133 - 21027249
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||| |||||||| ||||| |||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| ||||||||||||||    
T  21027133 aactcaaaggtcaaaattacaaattcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgcg 21027232  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||||||||    
T  21027233 aggcggggaaaggttac 21027249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20135651 - 20135766
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||| |||||| |||||||| ||  || |||| ||||||||    
T  20135651 aactcaaaagtcaaaattacaaaatattgcatgctctctggtcaagctcgctatggcgagttcatctgctcgctatggcaagtcgcaacgtacaactcgc 20135750  T
Q  100 gaggcggggaaaggtt 115  Q
    ||||||||||||||||    
T  20135751 gaggcggggaaaggtt 20135766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 22532736 - 22532839
Alignment:
Q  4 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 103  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||| |||||| |||||||||||||||   |||||||||||||||    
T  22532736 tcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctcgacgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgagg 22532835  T
Q  104 cggg 107  Q
    ||||    
T  22532836 cggg 22532839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20846887 - 20846771
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||| |||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||| ||| ||||||||||||||    
T  20846887 aactcaaaggtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagttgcaacgtgcaactcgcg 20846788  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||| ||||    
T  20846787 aggcggggaaagattac 20846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 20919065 - 20919175
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||| |||||||| | |||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||| |    
T  20919065 aactcaaaggtcaaaattataaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgtg 20919164  T
Q  101 aggcggggaaa 111  Q
    |||||||||||    
T  20919165 aggcggggaaa 20919175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 22357528 - 22357444
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 85  Q
    ||||||||||||||||| |  |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  22357528 aactcaaaagtcaaaattatgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgc 22357444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 38801059 - 38800955
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  |  ||||||||||| |||||||||| ||||||||||| |||||| |||| | ||| |||||||||||||||||||||||| |    
T  38801059 aactcaaaagtcaaaaatatgaaatcttgcatgctctctggtctagctcgctaggtgagttcatctgttcgctgtggcgagctgcgacgtgcaactcgtg 38800960  T
Q  101 aggcg 105  Q
    |||||    
T  38800959 aggcg 38800955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 20091131 - 20091026
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  |  ||||||||||| ||||||||||||||||||||||||||||   ||||| ||  ||||||| ||| ||||| ||||||||    
T  20091131 aactcaaaagtcaaaaataagaaatcttgcatgctctctggtcaagctcgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgaaactcgcg 20091032  T
Q  101 aggcgg 106  Q
    ||||||    
T  20091031 aggcgg 20091026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 20228445 - 20228364
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 115  Q
    |||||| ||||||||||| ||||||||||  ||||| ||||| ||||||||| ||||||||||||||||||| |||||||||    
T  20228445 ctctctagtcaagctcgcgaggcgagttcaactgctcgctatcgcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 20228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22468354 - 22468243
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || ||||||| ||| ||||||| ||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  22468354 aactcaaaagtcaaaactacgaaatcttacatgctctctgttcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 22468255  T
Q  100 gaggcggggaaa 111  Q
     ||||| |||||    
T  22468254 aaggcgaggaaa 22468243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33681473 - 33681578
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | | |||||||||    
T  33681473 aactcaaaagtcaaaattacgaaatctgggtagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggagcaactcgc 33681572  T
Q  100 gaggcg 105  Q
    ||||||    
T  33681573 gaggcg 33681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22921524 - 22921418
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||| |||||||| || ||||| ||    |||||||||||  ||||||||| ||||   |||||| ||||||||||||||| | ||||||||||||    
T  22921524 aactcaaaggtcaaaattacgaaatcatgacagctctctggtcacactcgctaggtgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcg 22921425  T
Q  101 aggcggg 107  Q
    |||||||    
T  22921424 aggcggg 22921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 21162194 - 21162244
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 53  Q
    |||||||||||||| |||| |||||||||| |||||||||| |||||||||    
T  21162194 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctagctcgcta 21162244  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 21754577 - 21754611
Alignment:
Q  71 gctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||||||||||||||||||||||    
T  21754577 gctatggcgagctgcgacgtgcaactcgcgaggcg 21754611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 43697824 - 43697930
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||| |||||||||||| || ||||| ||    |||||||||||  ||||||||||||||   |||||| ||||||| ||||||| | ||||||||| ||    
T  43697824 aacttaaaagtcaaaattacgaaatcatgacagctctctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactcacg 43697923  T
Q  101 aggcggg 107  Q
    |||||||    
T  43697924 aggcggg 43697930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 33798003 - 33798084
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 115  Q
    |||||||||||||||||| |||||||      | || ||||||||||||||| |||||||||||||||| || |||||||||    
T  33798003 ctctctggtcaagctcgcgaggcgagggatattactcgctatggcgagctgcaacgtgcaactcgcgagacgaggaaaggtt 33798084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 20248774 - 20248845
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    ||||||||||| ||| |||| |||||||||  ||| | ||||||||||| ||||| ||||||||||||||||    
T  20248774 ctctctggtcatgcttgctatggcgagttcaactgttcgctatggcgagttgcgaggtgcaactcgcgaggc 20248845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 35260668 - 35260629
Alignment:
Q  68 cttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  35260668 cttgctatggcgagctgcaaggtgcaactcgcgaggcggg 35260629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 45307764 - 45307859
Alignment:
Q  11 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||| | ||||||||  |||||||||||  ||||||| |||||||     |||| |||||||||||||||||  ||||||||||||||||    
T  45307764 tcaaaatcacgagatcttgcaagctctctggtcacactcgctacggcgagtaaacttgctcgctatggcgagctgcgaaatgcaactcgcgaggcg 45307859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 20637347 - 20637421
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||  |||| |||||||||   ||| || ||||||||||||||| | ||||||||| |||||||||    
T  20637347 cctctctggtcacactcggtaggcgagtgaatctactcgctatggcgagctgcaaggtgcaactctcgaggcggg 20637421  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 26065520 - 26065561
Alignment:
Q  65 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 106  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  26065520 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 26065561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 42864793 - 42864764
Alignment:
Q  76 ggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||||||||||||||||||||||    
T  42864793 ggcgagctgcgacgtgcaactcgcgaggcg 42864764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 35981308 - 35981260
Alignment:
Q  37 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 85  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  35981308 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 35981260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18818067 - 18817953
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  18818067 aactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 18817968  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  18817967 aggcggggaaaggtt 18817953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18878894 - 18878780
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  18878894 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 18878795  T
Q  101 aggcggggaaaggtt 115  Q
    | |||||||||||||    
T  18878794 atgcggggaaaggtt 18878780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19801084 - 19800970
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  19801084 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 19800985  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  19800984 aggcgaggaaaggtt 19800970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20536672 - 20536786
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||    
T  20536672 aactcgaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctatgacgtgcaactcgcg 20536771  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  20536772 aggcggggaaaggtt 20536786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 23406845 - 23406959
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||    
T  23406845 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggccagttcatctgctcgttatggcgagctgcgacgtgcaactcgcg 23406944  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  23406945 aggcggggaaaggtt 23406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21923585 - 21923479
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  21923585 aactcaaaagtcaaaatcacaaaatctcacatgctctctggtcaagctcgctaggcgagtacgtctgctcgctatggcgagctgcgacgtgcaactcgcg 21923486  T
Q  101 aggcggg 107  Q
    |||||||    
T  21923485 aggcggg 21923479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 16091998 - 16091888
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  16091998 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagcttcgatgtgcaactcgcg 16091899  T
Q  101 aggcggggaaa 111  Q
    |||| ||||||    
T  16091898 aggctgggaaa 16091888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 28648701 - 28648595
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  28648701 aactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 28648602  T
Q  101 aggcggg 107  Q
    |||||||    
T  28648601 aggcggg 28648595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5865934 - 5865830
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  5865934 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 5865835  T
Q  101 aggcg 105  Q
    |||||    
T  5865834 aggcg 5865830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 31971708 - 31971812
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| |||| ||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  31971708 aactcaaaagtcaaaaacacgaaatcttgcatgctctctggtctagctagctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 31971807  T
Q  101 aggcg 105  Q
    |||||    
T  31971808 aggcg 31971812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 41598648 - 41598752
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||||  |||| ||||  ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  41598648 aactcaaaagtcaaaatcacggaatcctgcaagctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 41598747  T
Q  101 aggcg 105  Q
    |||||    
T  41598748 aggcg 41598752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22875529 - 22875635
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||| |||||| | ||||||||||||    
T  22875529 aactcaaaggtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcaaggtgcaactcgcg 22875628  T
Q  101 aggcggg 107  Q
    |||||||    
T  22875629 aggcggg 22875635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 45130685 - 45130584
Alignment:
Q  4 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 103  Q
    |||||||||||||  || |||||||||||  |||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  45130685 tcaaaagtcaaaaatacgaaatcttgcatggtctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgagg 45130586  T
Q  104 cg 105  Q
    ||    
T  45130585 cg 45130584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17141377 - 17141477
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||||||    
T  17141377 aactcaaaagtaaaaaatacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcgcg 17141476  T
Q  101 a 101  Q
    |    
T  17141477 a 17141477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 21249845 - 21249949
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||   | ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  21249845 aactcaaaagtcaaaaatgcgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 21249944  T
Q  101 aggcg 105  Q
    |||||    
T  21249945 aggcg 21249949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6759721 - 6759827
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  |||||| |||||||| ||||||||||||| |||||| |||||||||||||||   ||||||||||||    
T  6759721 aactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcatggtgcaactcgcg 6759820  T
Q  101 aggcggg 107  Q
    |||||||    
T  6759821 aggcggg 6759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22627199 - 22627305
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||| | |||||| ||||||   ||||||||||||    
T  22627199 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatatgctcgatatggcaagctgcagggtgcaactcgcg 22627298  T
Q  101 aggcggg 107  Q
    |||||||    
T  22627299 aggcggg 22627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 21255683 - 21255787
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||   | ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||| ||||||||||||    
T  21255683 aactcaaaagtcaaaaatgcgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgatgtgcaactcgcg 21255782  T
Q  101 aggcg 105  Q
    |||||    
T  21255783 aggcg 21255787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21918667 - 21918563
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| || ||||||||| ||||||||||||||||   || | ||||||||||||||||||||||||||||||    
T  21918667 aactcaaaagtcaaaattacgaaatcttgcatgctgtctggtcaatctcgctaggcgagttcaagtgttcgctatggcgagctgcgacgtgcaactcgcg 21918568  T
Q  101 aggcg 105  Q
    |||||    
T  21918567 aggcg 21918563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 16199315 - 16199220
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 96  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  16199315 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaact 16199220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 7373213 - 7373328
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  7373213 aactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcg 7373311  T
Q  99 cgaggcggggaaaggtt 115  Q
    |||||| ||||||||||    
T  7373312 cgaggcagggaaaggtt 7373328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 23649017 - 23649131
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||| ||  ||||||||||| |||||| ||||||||||||||||||||||   |||| ||||||||||| ||| || || |||||| |    
T  23649017 aactcaaaagtcaaaaacatgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagttgctcgctatggcgagttgcaacatgtaactcggg 23649116  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  23649117 aggcgaggaaaggtt 23649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21389110 - 21389005
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  21389110 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 21389011  T
Q  100 gaggcg 105  Q
    ||||||    
T  21389010 gaggcg 21389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 21860136 - 21860063
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||||||    
T  21860136 ctctctggtcaagctcgctaggcgagtacgtctgctcgctatggtgagctgcgacgagcaactcgcgaggcggg 21860063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 21491456 - 21491549
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaa 94  Q
    |||| |||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | ||| ||||||||||| ||||||||    
T  21491456 aacttaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgctgtggcgagctgcaacgtgcaa 21491549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 21286718 - 21286791
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21286718 ctctctggtcacactcgctaggcgagtggatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21286791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 105
Target Start/End: Complemental strand, 21395629 - 21395529
Alignment:
Q  6 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    |||||||||||  || |||||| |||| ||||||||||| |||||||| |||||||||   || | ||| ||| ||||||||||||||||||||||||||    
T  21395629 aaaagtcaaaagtacgaaatctggcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggc 21395530  T
Q  105 g 105  Q
    |    
T  21395529 g 21395529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 105
Target Start/End: Complemental strand, 21790122 - 21790022
Alignment:
Q  6 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    |||||||||||  || |||||| |||| ||||||||||| |||||||| |||||||||   || | ||| ||| ||||||||||||||||||||||||||    
T  21790122 aaaagtcaaaagtacgaaatctggcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggc 21790023  T
Q  105 g 105  Q
    |    
T  21790022 g 21790022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26355355 - 26355250
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    |||| |||||| ||||| || ||||||||| |||| |||| |||||||||||||| ||||||||| |    
T  26355355 aactcaaaagtcaaaattacgaaatctggatagctctttggtcatgctcgttatggcgagttcatctgtttgccatggcgagctgcgaggtgcaactcac 26355256  T
Q  100 gaggcg 105  Q
    ||||||    
T  26355255 gaggcg 26355250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 23760464 - 23760392
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||| |||||||| ||||||||| |||||| || |||| ||||||||| |||||||||| ||||||    
T  23760464 ctctctggtcatgctcgctatggcgagttcatctgctcgcgatggtgagctgcgaggtgcaactcgtgaggcg 23760392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 6520864 - 6520942
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 111  Q
    ||||||| ||||  || |||||||||||   |||||| | ||||||||||||| | |||||||||||||||||||||||    
T  6520864 cctctctagtcacacttgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcgcgaggcggggaaa 6520942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 21674169 - 21674274
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| |  |  |||||||||||||  ||||||||||    
T  21674169 aactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcacgttggcgagctgcgagatgcaactcgc 21674268  T
Q  100 gaggcg 105  Q
    ||||||    
T  21674269 gaggcg 21674274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 22526099 - 22526140
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  22526099 tctgcttgctatggcgagctgcaacatgcaactcgcgaggcg 22526140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 37116051 - 37115978
Alignment:
Q  32 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| || ||||||||||||||||    
T  37116051 tcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 37115978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 17439023 - 17438982
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  17439023 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 17438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 22365266 - 22365307
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22365266 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 22365307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 5610259 - 5610211
Alignment:
Q  37 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 85  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  5610259 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 5610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 12699296 - 12699410
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  12699296 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgacttcatctgcttgctatggcgagctgcgacgtgcaactcgcg 12699395  T
Q  101 aggcggggaaaggtt 115  Q
    ||| |||||||||||    
T  12699396 aggtggggaaaggtt 12699410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 9509653 - 9509767
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  9509653 aactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcg 9509752  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  9509753 aggcggggaaaggtt 9509767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 38227944 - 38228050
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  38227944 aactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 38228043  T
Q  101 aggcggg 107  Q
    |||||||    
T  38228044 aggcggg 38228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39267303 - 39267189
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  39267303 aactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 39267204  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  39267203 aggcgaggaaaggtt 39267189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9751207 - 9751093
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||| ||||||||    
T  9751207 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgtaactcgcg 9751108  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  9751107 aggcgaggaaaggtt 9751093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3564021 - 3563915
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  3564021 aactcaaaagtcaaaataacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 3563922  T
Q  101 aggcggg 107  Q
    |||||||    
T  3563921 aggcggg 3563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26212449 - 26212562
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| ||||||||||||||    
T  26212449 aactcaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgcg 26212548  T
Q  101 aggcggggaaaggt 114  Q
    ||||||||||||||    
T  26212549 aggcggggaaaggt 26212562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27847501 - 27847397
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||    
T  27847501 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcg 27847402  T
Q  101 aggcg 105  Q
    |||||    
T  27847401 aggcg 27847397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 18302642 - 18302756
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| |||||| ||||||||||  ||||| | | ||||||||||| ||||||||||||||    
T  18302642 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactgctcgttgtggcgagctgcaacgtgcaactcgcg 18302741  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  18302742 aggcgaggaaaggtt 18302756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11995715 - 11995599
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || || | |||||||||||| || ||||||| |||    
T  11995715 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttttccatggcgagctgcaacatgcaacttgcg 11995616  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||||||||    
T  11995615 aggcggggaaaggttac 11995599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 34201247 - 34201351
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||  | ||||||||||||||||| ||||||||||||    
T  34201247 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctattcgctatggcgagctgcgatgtgcaactcgcg 34201346  T
Q  101 aggcg 105  Q
    |||||    
T  34201347 aggcg 34201351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 10866135 - 10866051
Alignment:
Q  153 tagtgtggcttagcaagacgtttaataaaaagggcaagattgtcatttcctcctatatgggccacgtttcccccttttccccttcat 239  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  10866135 tagtgtggcttagcaagacttttaataaaaagggcaagattgtcattt-ttcctatatgggccacg-ttcccccttttccccttcat 10866051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 15754544 - 15754428
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||   | ||||||||||| |||||||||||||||||||||||||||||   || |  | |||||||| ||||||||||||||||||    
T  15754544 aactcaaaagtcaaaaattcgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcgcg 15754445  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  15754444 aggcggggaaaagttac 15754428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40443841 - 40443957
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| || ||||||| ||||||||||||||||||   || | ||  ||||||||||| ||||||||||||||    
T  40443841 aactcaaaagtcaaaaatacgaaatcttgcatgctttctggtctagctcgctaggcgagttcaagtgttcgccgtggcgagctgcaacgtgcaactcgcg 40443940  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||||||||    
T  40443941 aggcggggaaaggttac 40443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 15143688 - 15143590
Alignment:
Q  6 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    ||||||||||||||| |||||| |||   ||||||||||||||||| |||||||||| |||||| ||||||||||||||| | ||||| ||||||||||    
T  15143688 aaaagtcaaaatcacgaaatctcgcaagttctctggtcaagctcgcaaggcgagttcatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 15143590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16385915 - 16385812
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||   || | | | ||||||||||| |||||||||||||     
T  16385915 aactcaaaagtcaaaattacaaaatcttgcatgctctctgatctagctcgctaggcgagttcaagtgttcgttgtggcgagctgcaacgtgcaactcgca 16385816  T
Q  101 aggc 104  Q
    ||||    
T  16385815 aggc 16385812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 810786 - 810681
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||||| ||| ||||||||||||| |||||||||||    
T  810786 aactcaaaagtcaaaattacgaaatctggatggctctctggtcatgctcgctatggcgagttcatctgctcgctgtggcgagctgcgaggtgcaactcgc 810687  T
Q  100 gaggcg 105  Q
    ||||||    
T  810686 gaggcg 810681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19649142 - 19649037
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||| ||    
T  19649142 aactcaaaagtcaaaactacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaacttgc 19649043  T
Q  100 gaggcg 105  Q
    ||||||    
T  19649042 gaggcg 19649037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28504958 - 28504897
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 62  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  28504958 aactcaaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttc 28504897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12756374 - 12756268
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||| ||| ||  |||||| |||| |||||||| ||||||||| |||||| || |||||||||||||||||||||||||    
T  12756374 aactcaaaagtcaaaattacgaaat-ttggatagctctctagtcatgctcgctatggcgagttcatctgctcgcgatggcgagctgcgacgtgcaactcg 12756276  T
Q  99 cgaggcgg 106  Q
    ||||||||    
T  12756275 cgaggcgg 12756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2831963 - 2831905
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 59  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||    
T  2831963 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgag 2831905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 21064809 - 21064717
Alignment:
Q  11 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 102  Q
    |||||||||||||||||||||  |||||||||||  ||||||| |||||||     |||||||||||||||||||||| ||||||||||||||    
T  21064809 tcaaaatcacaaaatcttgcaagctctctggtcacactcgctacggcgagtaaacttgcttgctatggcgagctgcgaagtgcaactcgcgag 21064717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 16219340 - 16219267
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  16219340 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 16219267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24054930 - 24055035
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  |||||||||||||| | ||||||||| |||||||| |||| ||||    | | | | |||||||||||||||||||||||||    
T  24054930 aactcaaaagtcaaaactacaaaatcttgcatgcactctggtcatgctcgctatggcgtgttcagtcgttcgttgtggcgagctgcgacgtgcaactcgc 24055029  T
Q  100 gaggcg 105  Q
    ||||||    
T  24055030 gaggcg 24055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 44117001 - 44117073
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||| ||||| || ||||||||| |||||| ||||||| ||||||||| |||||||||||||||||    
T  44117001 ctctctggtcatgctcgttatggcgagttcatctgctcgctatggtgagctgcgatgtgcaactcgcgaggcg 44117073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 47832304 - 47832378
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| |  ||||||||||||||||||    
T  47832304 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaagatgcaactcgcgaggcggg 47832378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 68210 - 68315
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| |  |||||| ||||||||| ||||| |||||    
T  68210 aactcaaaagtcaaaattacgaaatctggatatctctctggtcatgctcgctatggcgagttcatctgatcactatggtgagctgcgaggtgcacctcgc 68309  T
Q  100 gaggcg 105  Q
    ||||||    
T  68310 gaggcg 68315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 11880714 - 11880819
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| |||||||||||||||||||||||||    
T  11880714 aactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcaactcgc 11880813  T
Q  100 gaggcg 105  Q
    ||||||    
T  11880814 gaggcg 11880819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 9703772 - 9703811
Alignment:
Q  66 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9703772 tgctcgctatggcgagctgcgacgtgcaactcgcgaggcg 9703811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 9389308 - 9389267
Alignment:
Q  66 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  9389308 tgctcgctatggcgagctgcgaggtgcaactcgcgaggcggg 9389267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18006105 - 18006210
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| || |||||| |||| | |||||| |||||| ||| |||||| ||||    
T  18006105 aactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggtgagttcatctgttcgctatgacgagcttcgaagtgcaattcgc 18006204  T
Q  100 gaggcg 105  Q
    ||||||    
T  18006205 gaggcg 18006210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44014638 - 44014743
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | |||||| | |  ||||| |||||||||||    
T  44014638 aactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatgacaatttgcgaggtgcaactcgc 44014737  T
Q  100 gaggcg 105  Q
    ||||||    
T  44014738 gaggcg 44014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 4993960 - 4994055
Alignment:
Q  11 tcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||| | ||||||||  |||||||||||  ||||||| |||||||     |||| |||||||||||||||||  ||||||||||||||||    
T  4993960 tcaaaatcacgagatcttgcaagctctctggtcacactcgctacggcgagtaaacttgctcgctatggcgagctgcgaaatgcaactcgcgaggcg 4994055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 3272249 - 3272354
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || ||||    ||| ||||||||||| |||||||| |||||||     |||| ||||||||||||| |||| || |||||||    
T  3272249 aactcaaaagtcaaaattacgaaattcaacatgctctctggtcatgctcgctatggcgagtaaggttgctcgctatggcgagctacgacatgtaactcgc 3272348  T
Q  100 gaggcg 105  Q
    ||||||    
T  3272349 gaggcg 3272354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 17061573 - 17061532
Alignment:
Q  66 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||| |||||||||||||||||| |||||||| |||||||||    
T  17061573 tgctcgctatggcgagctgcgacatgcaactcacgaggcggg 17061532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22779884 - 22779770
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  22779884 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcg 22779785  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  22779784 aggcggggaaaggtt 22779770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 17287453 - 17287339
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| |    
T  17287453 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgtg 17287354  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  17287353 aggcggggaaaggtt 17287339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 27415611 - 27415497
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  27415611 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 27415512  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  27415511 aggcgaggaaaggtt 27415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20637951 - 20637835
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || |||||||| || |||| ||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  20637951 aactcaaaagtcaaaattacgaaatcttggatgctctttggtcaagctcactaggcaagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 20637852  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  20637851 aggcggggaaaagttac 20637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 28496130 - 28496024
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||    
T  28496130 aactcaaaagttaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactcgcg 28496031  T
Q  101 aggcggg 107  Q
    |||||||    
T  28496030 aggcggg 28496024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29808540 - 29808434
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||    
T  29808540 aactcaaaagttaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactcgcg 29808441  T
Q  101 aggcggg 107  Q
    |||||||    
T  29808440 aggcggg 29808434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21939847 - 21939961
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||| | ||||||||||||    
T  21939847 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaatgtgcaactcgcg 21939946  T
Q  101 aggcggggaaaggtt 115  Q
    | ||| |||||||||    
T  21939947 aagcgaggaaaggtt 21939961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1561767 - 1561883
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || |  | |||||||| ||||||||||||||||||    
T  1561767 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcgcg 1561866  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  1561867 aggcggggaaaagttac 1561883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 16920301 - 16920197
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||| ||| |||||||||||||||||| | || | ||||||||||||||||||||||||||||||    
T  16920301 aactcaaaagtcaaaaatacgaaatcttgcatgctctctagtctagctcgctaggcgagttcatttgttcgctatggcgagctgcgacgtgcaactcgcg 16920202  T
Q  101 aggcg 105  Q
    |||||    
T  16920201 aggcg 16920197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18409484 - 18409378
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||| || | |||||||||||||   ||||||||||||    
T  18409484 aactcaaaggtcaaaatcacgaaatcctgcatgctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcagggtgcaactcgcg 18409385  T
Q  101 aggcggg 107  Q
    |||||||    
T  18409384 aggcggg 18409378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19303198 - 19303092
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||| | ||| |||||| |||||| ||||||||||||| | | |||||||||||     
T  19303198 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcacgaggtgagttcatctgctcgctatggcgagctccaaggtgcaactcgca 19303099  T
Q  101 aggcggg 107  Q
    |||||||    
T  19303098 aggcggg 19303092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22439263 - 22439368
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||| |||||||    
T  22439263 aactcaaaagtcaaaattacaaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgtaactcgc 22439362  T
Q  100 gaggcg 105  Q
    ||||||    
T  22439363 gaggcg 22439368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 1645142 - 1645256
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||| | || |||    ||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||  ||||||||||||||    
T  1645142 aactcaaaagtcaaaaactcagaattcgacatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtaacgtgcaactcgcg 1645241  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  1645242 aggcgaggaaaggtt 1645256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18457178 - 18457285
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||| |||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| |||||||||||    
T  18457178 aactcaaaagttaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgtcgtgcaactcg 18457276  T
Q  99 cgaggcggg 107  Q
    |||||||||    
T  18457277 cgaggcggg 18457285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25603042 - 25602932
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||||||| || |||||   |||||  || ||||||||||| || ||||||||||    
T  25603042 aactcaaaagttaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggtgagttaagctgctctctgtggcgagctgcaacatgcaactcgc 25602943  T
Q  100 gaggcggggaa 110  Q
    |||||| ||||    
T  25602942 gaggcgaggaa 25602932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25629012 - 25628906
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||| ||||||||||||||  |||||||||   |||| ||||||| ||||||||| |||||| |||||| ||||||||||||||| | || |||||||||    
T  25629012 aactaaaaagtcaaaatcatgaaatcttgcgagctctttggtcaaactcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcgcg 25628913  T
Q  101 aggcggg 107  Q
    |||||||    
T  25628912 aggcggg 25628906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19863441 - 19863546
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || ||||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  19863441 aactcaaaagtcaaaactacgaaatcttacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 19863540  T
Q  100 gaggcg 105  Q
    ||||||    
T  19863541 gaggcg 19863546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22831955 - 22832060
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || ||||||||||| ||||||||||| |||| ||| || ||||||   || | |||||||||||||||||||||||||||||    
T  22831955 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcatgctcactatggtgagttcagttgttcgctatggcgagctgcgacgtgcaactcgc 22832054  T
Q  100 gaggcg 105  Q
    ||||||    
T  22832055 gaggcg 22832060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15894087 - 15893981
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||||||   ||||| ||  ||||||| ||| ||||||| ||||||    
T  15894087 aactcaaaagtcaaaagtacgaaatcttgcatgctctctagtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcagctcgcg 15893988  T
Q  101 aggcggg 107  Q
    |||||||    
T  15893987 aggcggg 15893981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22334539 - 22334479
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagtt 61  Q
    ||||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||    
T  22334539 aactcaaaagtcaaatttacgaaatcttgcatgctctctggtcaagctcgctaggcgagtt 22334479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 22080361 - 22080287
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||| | |||||||||| ||||||||    
T  22080361 ctctctggtcaagctcgctatggtgagttcatctgtttgctatggcgagctgcaaggtgcaactcgtgaggcggg 22080287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 31155053 - 31154950
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    ||||||||||||||  ||| |||||||||| |||||||||| ||||||||| |||||||   | |||| ||| |||||||||||  || |||||||||||    
T  31155053 ctcaaaagtcaaaaaaacagaatcttgcatgctctctggtctagctcgctatggcgagtatgtttgctcgctgtggcgagctgcatcgcgcaactcgcga 31154954  T
Q  102 ggcg 105  Q
    ||||    
T  31154953 ggcg 31154950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25956278 - 25956172
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||| |||||||||||| || ||||| ||    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||| ||||||    
T  25956278 aacttaaaagtcaaaattacgaaatcatgacagctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgcg 25956179  T
Q  101 aggcggg 107  Q
    |||||||    
T  25956178 aggcggg 25956172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 22432713 - 22432818
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  |||||||||||||| ||||||||||| |||||||| ||||| |||   || | | | |||| ||||||| ||||||||| ||    
T  22432713 aactcaaaagtcaaaactacaaaatcttgcatgctctctggtcatgctcgctatggcgaattcagttggtcgttgtggcaagctgcggcgtgcaacttgc 22432812  T
Q  100 gaggcg 105  Q
    ||||||    
T  22432813 gaggcg 22432818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 23019904 - 23019977
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||   ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  23019904 ctctctggtcgcactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 23019977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20594237 - 20594289
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 53  Q
    ||||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  20594237 aactcaaaagtaaaaatcacgaaatcttgcaagctctctggtcaagctcgcta 20594289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25641841 - 25641737
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||| |||  |||||||||| ||| ||||||||||| ||||| || |||||||||   || | ||| |||||||||||||||| |||||||     
T  25641841 aactcaaaagtccaaactacaaaatcttacatgctctctggtcatgctcgttatggcgagttcagttgttcgctgtggcgagctgcgacgtccaactcgt 25641742  T
Q  100 gaggc 104  Q
    |||||    
T  25641741 gaggc 25641737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 4185478 - 4185375
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    |||||||||||||| |||| |||||||||| |||||||||| ||||||||| |||||||     |||| | | |||||||||||  || |||||||||||    
T  4185478 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctagctcgctatggcgagtaggattgctcgttgtggcgagctgcatcgcgcaactcgcga 4185379  T
Q  102 ggcg 105  Q
    ||||    
T  4185378 ggcg 4185375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18180950 - 18181055
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||||||||||| ||||    ||| ||||||||||| |||||||| |||||||     |||| ||||||||||||| |||| || |||||||    
T  18180950 aactcaaaagtcaaaatcacgaaattcaacatgctctctggtcatgctcgctatggcgagtaaggttgctcgctatggcgagctacgacatgtaactcgc 18181049  T
Q  100 gaggcg 105  Q
    ||||||    
T  18181050 gaggcg 18181055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 31164515 - 31164410
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||| ||||||||  ||||||||||||| ||||||| || ||||||||| |||||||    ||||| ||| |||||||||||   | |||||||||    
T  31164515 aactcaaatgtcaaaattgcaaaatcttgcatgctctctgctctagctcgctatggcgagtaggactgctcgctgtggcgagctgcattgcgcaactcgc 31164416  T
Q  100 gaggcg 105  Q
    ||||||    
T  31164415 gaggcg 31164410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 4667868 - 4667769
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  4667868 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 4667769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 4674715 - 4674616
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  4674715 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 4674616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 15539816 - 15539849
Alignment:
Q  74 atggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||||| |||||||||||||||||||    
T  15539816 atggcgagctgcgaggtgcaactcgcgaggcggg 15539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 18230771 - 18230812
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18230771 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18230812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 18231153 - 18231194
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18231153 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18231194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19652659 - 19652764
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| | || | ||||||||||| ||| | ||| |||||||    
T  19652659 aactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatttgttcgctatggcgagatgcaaggtgtaactcgc 19652758  T
Q  100 gaggcg 105  Q
     |||||    
T  19652759 aaggcg 19652764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 20224546 - 20224587
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  20224546 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 20224587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 22118530 - 22118571
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22118530 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 22118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 20594286 - 20594322
Alignment:
Q  71 gctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||||| | |||||||||||||||||||    
T  20594286 gctatggcgagctgcaaggtgcaactcgcgaggcggg 20594322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22636898 - 22637012
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  22636898 aactcagaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcg 22636997  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  22636998 aggcggggaaaggtt 22637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 44053293 - 44053407
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  44053293 aactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcg 44053392  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  44053393 aggcggggaaaggtt 44053407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12903209 - 12903325
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  12903209 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgatcgctatggcgagctgcgacgtgcaactcgcg 12903308  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  12903309 aggcggggaaaagttac 12903325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16239649 - 16239533
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||    
T  16239649 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgctatggcgagctgcaacgtgcaactcgcg 16239550  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||||||||    
T  16239549 aggcggggaaaggttac 16239533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20156947 - 20156841
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  20156947 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcgacgtgcaactcgcg 20156848  T
Q  101 aggcggg 107  Q
    |||||||    
T  20156847 aggcggg 20156841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7089330 - 7089446
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  7089330 aactcaaaagtcaaaattacgaaatcttgcatgctctttggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcg 7089429  T
Q  101 aggcggggaaaggttac 117  Q
    | ||||||||| |||||    
T  7089430 aagcggggaaaagttac 7089446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 3097096 - 3097200
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  3097096 aactcaaaagtcaaaattatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 3097195  T
Q  101 aggcg 105  Q
    |||||    
T  3097196 aggcg 3097200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 24029205 - 24029319
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||| || ||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  24029205 aactcaaaagtcaaaatcacgaaatcttgcatgctctctgatcgagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 24029304  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  24029305 aggcgaggaaaggtt 24029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 3332284 - 3332396
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 102  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||||||||  || || ||||||||||||||| ||||||||||||||||    
T  3332284 ctcaaaagtcaaaatcacgaaatcttgcatgctctctgatcaagctcgcgaggcgagttcaactactcgctatggcgagctgcaacgtgcaactcgcgag 3332383  T
Q  103 gcggggaaaggtt 115  Q
    ||| |||||||||    
T  3332384 gcgaggaaaggtt 3332396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15091361 - 15091467
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||   ||||| ||||||    
T  15091361 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcacctcgcg 15091460  T
Q  101 aggcggg 107  Q
    |||||||    
T  15091461 aggcggg 15091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15552277 - 15552382
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc-ctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||  |||| | |||||||||||||||||||||||||||||    
T  15552277 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagtctgttcgctatggcgagctgcgacgtgcaactcgc 15552376  T
Q  100 gaggcg 105  Q
    ||||||    
T  15552377 gaggcg 15552382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22633870 - 22633756
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||  |||||  ||||||| |||||| ||||||||||||||    
T  22633870 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactgctcactatggcaagctgcaacgtgcaactcgcg 22633771  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| | |||||||    
T  22633770 aggcgagaaaaggtt 22633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 17053495 - 17053599
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||| ||| |||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||    
T  17053495 aactcaaaagtcaaaaatacgaaatcttgcatgctctctagtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcg 17053594  T
Q  101 aggcg 105  Q
    |||||    
T  17053595 aggcg 17053599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16377179 - 16377073
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||  ||||||||||  || ||||||||||||||||||| |||||| |||||| ||||||||||||||| | || |||||||||    
T  16377179 aactcaaaagtcaaaatcatgaaatcttgcaagctatctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcgcg 16377080  T
Q  101 aggcggg 107  Q
    |||||||    
T  16377079 aggcggg 16377073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44928580 - 44928474
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||||  |||||||||  |||||| |||||||||||||||||||||| |||| |  |||||||||||||| |||||||||||||     
T  44928580 aactcaaaagtcaaaatcacggaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgttcactatggcgagctgcaacgtgcaactcgca 44928481  T
Q  101 aggcggg 107  Q
    |||||||    
T  44928480 aggcggg 44928474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14052970 - 14052869
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || || |||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| |||||||||||    
T  14052970 aactcaaaagtcaaaaatacgaa-tcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcgcg 14052872  T
Q  101 agg 103  Q
    |||    
T  14052871 agg 14052869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44102673 - 44102780
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  44102673 aactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctacggcgagctgcgacgtgcaactcg 44102771  T
Q  99 cgaggcggg 107  Q
    |||||||||    
T  44102772 cgaggcggg 44102780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 12774462 - 12774569
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||||| | ||  ||||||||||| |||||| | ||||||||| |||| ||||||||||||||||||||||||||||||    
T  12774462 aactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgcgatggcgagttcatctgtttgctatggcgagctgcgacgtgcaactcg 12774560  T
Q  99 cgaggcggg 107  Q
    |||||||||    
T  12774561 cgaggcggg 12774569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14039113 - 14039197
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 85  Q
    |||||||||||||||||||  ||||||||||  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||    
T  14039113 aactcaaaagtcaaaatcatgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatgccgagctgc 14039197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 16597112 - 16597225
Alignment:
Q  4 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 103  Q
    |||||| ||||||| ||| |||||||||| |||||||||| ||||||||||||||||||   || | |   ||||||||||| |||||||||||||||||    
T  16597112 tcaaaaatcaaaattacagaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgtcgtggcgagctgcaacgtgcaactcgcgagg 16597211  T
Q  104 cggggaaaggttac 117  Q
    |||| || ||||||    
T  16597212 cgggaaagggttac 16597225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21815289 - 21815182
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||| |||| ||| ||  ||||||||||| |||||| | ||||||||| |||||| ||||||||||||| ||||||||||||||    
T  21815289 aactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaactcg 21815191  T
Q  99 cgaggcggg 107  Q
     ||||||||    
T  21815190 tgaggcggg 21815182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 6190897 - 6191004
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||  |||| ||| ||  ||||||||||| |||||||| || |||||| || ||| |||||| |||||||||||||||||||||    
T  6190897 aactcaaaagtcaaaatcatgaaat-ttggatagctctctggtcatgctcgctatggtgagttcatcagctcgctatgacgagctgcgacgtgcaactcg 6190995  T
Q  99 cgaggcggg 107  Q
    |||||||||    
T  6190996 cgaggcggg 6191004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21818382 - 21818275
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||| |||| ||| ||  ||||||||||| | |||| | ||||||||| |||||| ||||||||||||| ||||||||||||||    
T  21818382 aactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgatcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaactcg 21818284  T
Q  99 cgaggcggg 107  Q
     ||||||||    
T  21818283 tgaggcggg 21818275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13812466 - 13812408
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 59  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||    
T  13812466 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgtgaggcgag 13812408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 39705913 - 39705839
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  39705913 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 39705839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7799161 - 7799222
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagtt 61  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  7799161 aactcagaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagtt 7799222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 43198212 - 43198139
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  43198212 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 43198139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 7799210 - 7799254
Alignment:
Q  71 gctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  7799210 gctatggcgagttgcgacgtgcaactcgcgaggcggggaaaggtt 7799254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 23374117 - 23374074
Alignment:
Q  74 atggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 117  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  23374117 atggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 23374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 46640018 - 46639925
Alignment:
Q  12 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||||||| ||  ||||| |||||||||||||| | ||||| ||  |||||| ||||||||||||||| | ||||||||| |||||||    
T  46640018 caaaatcacaaaatcatgtttcctcactggtcaagctcgcgatggcga-ttgatctgctcgctatggcgagctgcaaggtgcaactcacgaggcg 46639925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13569973 - 13570078
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||     || | ||| |||||||||||||||||||||||||    
T  13569973 aactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctatggcgagtaaagttgttcgctgtggcgagctgcgacgtgcaactcgc 13570072  T
Q  100 gaggcg 105  Q
    ||||||    
T  13570073 gaggcg 13570078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23843940 - 23844045
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | | | |||||||||||||||||||||||||    
T  23843940 aactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgatgtggcgagctgcgacgtgcaactcgc 23844039  T
Q  100 gaggcg 105  Q
    ||||||    
T  23844040 gaggcg 23844045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44676093 - 44676198
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  | | |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| |||||||||||||||||||||||||    
T  44676093 aactcaaaagtcaaaaatatagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcaactcgc 44676192  T
Q  100 gaggcg 105  Q
    ||||||    
T  44676193 gaggcg 44676198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 10314244 - 10314283
Alignment:
Q  66 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  10314244 tgctcgctatggcgagctgcgaagtgcaactcgcgaggcg 10314283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 13845003 - 13845109
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||| |||||||||||| || ||||| ||    |||| ||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||| |||||    
T  13845003 aacttaaaagtcaaaattacgaaatcatgacagctctttggtcacactcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaattcgcg 13845102  T
Q  101 aggcggg 107  Q
    |||||||    
T  13845103 aggcggg 13845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 105
Target Start/End: Original strand, 8846889 - 8846922
Alignment:
Q  72 ctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||| |||||||||||||||||    
T  8846889 ctatggcgagctgcgaggtgcaactcgcgaggcg 8846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15121461 - 15121356
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  ||| |||    ||| ||||||||||| |||||||| |||||||     || ||||| |||||||||||||| ||||||||||    
T  15121461 aactcaaaagtcaaaaatacataattcaacatgctctctggtcatgctcgctatggcgagtaaggttgtttgctgtggcgagctgcgacttgcaactcgc 15121362  T
Q  100 gaggcg 105  Q
    ||||||    
T  15121361 gaggcg 15121356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 53081693 - 53081652
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  53081693 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 53081652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 12287726 - 12287686
Alignment:
Q  65 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  12287726 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 12287686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13664 - 13780
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  13664 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactcgcg 13763  T
Q  101 aggcggggaaaggttac 117  Q
    | |||||||||||||||    
T  13764 atgcggggaaaggttac 13780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 13442717 - 13442832
Alignment:
Q  2 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |    
T  13442717 actcaaaagtgaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcaa 13442816  T
Q  102 ggcggggaaaggttac 117  Q
    ||||||||||||||||    
T  13442817 ggcggggaaaggttac 13442832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20698104 - 20697993
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  20698104 aactcaaaagtcaaaattacaaaatcttgcatgctctctggtcaagctcgctagacgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 20698005  T
Q  101 aggcggggaaag 112  Q
    ||||||| ||||    
T  20698004 aggcgggaaaag 20697993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26687351 - 26687457
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  26687351 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactcgcg 26687450  T
Q  101 aggcggg 107  Q
    |||||||    
T  26687451 aggcggg 26687457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 17499805 - 17499917
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 102  Q
    |||||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||    
T  17499805 ctcaaaagtcaaaatcatgaaatcttgcattctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgag 17499904  T
Q  103 gcggggaaaggtt 115  Q
    |||||||||||||    
T  17499905 gcggggaaaggtt 17499917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11424420 - 11424306
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||   ||||||||||||    
T  11424420 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgcg 11424321  T
Q  101 aggcggggaaaggtt 115  Q
    |||||| ||||||||    
T  11424320 aggcggagaaaggtt 11424306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 17247943 - 17247837
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||| | ||||||||||||||||||||||||||||||    
T  17247943 aactcaaaagtcaaaatcacgaaatcttgcaacctctctggtcaagctcgctaggagagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 17247844  T
Q  101 aggcggg 107  Q
    |||||||    
T  17247843 aggcggg 17247837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 17488323 - 17488435
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 102  Q
    ||||||||||||| |||| ||||||||||| |||||| |||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  17488323 ctcaaaagtcaaattcacgaaatcttgcatgctctctagtcaagcttgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcgag 17488422  T
Q  103 gcggggaaaggtt 115  Q
    |||||||||||||    
T  17488423 gcggggaaaggtt 17488435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14666069 - 14666175
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||| |||||||||||||||    
T  14666069 aactcaaaagtcaaaatcataaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcgcg 14666168  T
Q  101 aggcggg 107  Q
    |||||||    
T  14666169 aggcggg 14666175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14735582 - 14735688
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||| |||||||||||||||    
T  14735582 aactcaaaagtcaaaatcataaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcgcg 14735681  T
Q  101 aggcggg 107  Q
    |||||||    
T  14735682 aggcggg 14735688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25476042 - 25475936
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||| | || |||||||||    
T  25476042 aactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctgcaaggtacaactcgcg 25475943  T
Q  101 aggcggg 107  Q
    |||||||    
T  25475942 aggcggg 25475936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 184418 - 184318
Alignment:
Q  15 aatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggt 114  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  184418 aatcacgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggggaaaggt 184319  T
Q  115 t 115  Q
    |    
T  184318 t 184318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 53070356 - 53070249
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||||||||||| ||||||||||  ||| |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||    
T  53070356 aactcaaaagtcaaaatcacgaaatcttgcaagctccctggtcaagctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgc 53070257  T
Q  100 gaggcggg 107  Q
    ||||||||    
T  53070256 gaggcggg 53070249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18438998 - 18439104
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||   ||||||||||||    
T  18438998 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctactcgctatggcgagctgctgggtgcaactcgcg 18439097  T
Q  101 aggcggg 107  Q
    |||||||    
T  18439098 aggcggg 18439104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23083018 - 23082912
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||||     
T  23083018 aactcaaaagtcaaaatcacaaaatctgacatgctctctggtcaagctcgctgggcgagttcatctactcgctatggcgagctgcgacgtgcaactcgca 23082919  T
Q  101 aggcggg 107  Q
    |||||||    
T  23082918 aggcggg 23082912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43842642 - 43842756
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||| | ||||||||||| ||||    
T  43842642 aactaaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagttacgacgtgcaacccgcg 43842741  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  43842742 aggcggggaaaggtt 43842756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12852021 - 12851908
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||| |||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  12852021 aactcaaaagtcaaaatcacgaaatcttgcatgctctcaggtcaagatcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 12851922  T
Q  101 aggcggggaaaggt 114  Q
    ||||| ||||||||    
T  12851921 aggcgaggaaaggt 12851908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 13209985 - 13209869
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||   || | || |||||||||||||||||||||||||||    
T  13209985 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcgcg 13209886  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  13209885 aggcggggaaaagttac 13209869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14179786 - 14179890
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  14179786 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 14179885  T
Q  101 aggcg 105  Q
    |||||    
T  14179886 aggcg 14179890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14973318 - 14973424
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||| |||||| |||||||||||||||   ||||||||||||    
T  14973318 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcagggtgcaactcgcg 14973417  T
Q  101 aggcggg 107  Q
    |||||||    
T  14973418 aggcggg 14973424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40213378 - 40213275
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||| |||||| ||||||||||||| | | ||| ||||||||    
T  40213378 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcactaggcgagttcatctgctcgctatggcgagctacaaggtgtaactcgcg 40213279  T
Q  101 aggc 104  Q
    ||||    
T  40213278 aggc 40213275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 30030292 - 30030406
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||| | || ||||||||||| |||||||||||||||||||||||||||||  || || ||||||||||| ||| ||| |||||| |||    
T  30030292 aactcaaaagtcaaatttacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctactcgctatggcgagttgcaacgcgcaacttgcg 30030391  T
Q  101 aggcggggaaaggtt 115  Q
    ||||||| |||||||    
T  30030392 aggcgggaaaaggtt 30030406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 16809849 - 16809953
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || |||||| |||| |||||| ||| |||||||||||||||||| |||  | ||||||||||||||||||||||||||||||    
T  16809849 aactcaaaagtcaaaaatacgaaatctagcatgctctctagtctagctcgctaggcgagttcatctattcgctatggcgagctgcgacgtgcaactcgcg 16809948  T
Q  101 aggcg 105  Q
    |||||    
T  16809949 aggcg 16809953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 12399659 - 12399772
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| ||||||| ||||||||||   || || | |||||||||||||||||||||||||||    
T  12399659 aactcaaaagtcaaaattacaaaatctagcatgctctctggtctagctcgcgaggcgagttcaagtgttttccatggcgagctgcgacgtgcaactcgcg 12399758  T
Q  101 aggcggggaaaggtt 115  Q
    | |||||||| ||||    
T  12399759 a-gcggggaagggtt 12399772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 14576490 - 14576386
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     |||| ||| |||||||||||  ||||||||||| |    
T  14576490 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtaggattgctcgctgtggcgagctgcatcgtgcaactcggg 14576391  T
Q  101 aggcg 105  Q
    |||||    
T  14576390 aggcg 14576386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14669224 - 14669304
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgag 81  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||    
T  14669224 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgag 14669304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14573052 - 14573156
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||     |||||| | |||||||||||  ||||||||| |||    
T  14573052 aactcaaaagtcaaaaacacaaaatcttgcatgctctttggtcaagctcgctaggcgagtaggattgcttgttgtggcgagctgcatcgtgcaacttgcg 14573151  T
Q  101 aggcg 105  Q
    |||||    
T  14573152 aggcg 14573156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12933967 - 12933856
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||    
T  12933967 aactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgc 12933868  T
Q  100 gaggcggggaaa 111  Q
    |||||| |||||    
T  12933867 gaggcgaggaaa 12933856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23408892 - 23409003
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || || |||||||| |||| |||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  23408892 aactcaaaagtcaaaattacgaattcttgcatgctctttggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 23408991  T
Q  100 gaggcggggaaa 111  Q
    |||||| |||||    
T  23408992 gaggcgaggaaa 23409003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12340216 - 12340321
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||     |||| ||| ||||||||| |||| || |||||||    
T  12340216 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagtagggttgctcgctgtggcgagctacgacatgtaactcgc 12340315  T
Q  100 gaggcg 105  Q
    ||||||    
T  12340316 gaggcg 12340321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15877486 - 15877381
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||| |||||||||||||||||    
T  15877486 aactcaaaagtcaaaactacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagttgcgacgtgcaactcgc 15877387  T
Q  100 gaggcg 105  Q
    ||||||    
T  15877386 gaggcg 15877381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 9513407 - 9513479
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9513407 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9513479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 9521382 - 9521454
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9521382 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9521454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 17247148 - 17247084
Alignment:
Q  43 caagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||    
T  17247148 caagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgcgaggcggg 17247084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 4588439 - 4588368
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||||| ||||||||||  ||||| |||||||||||||||  ||||||||||||||||||    
T  4588439 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcatcgtgcaactcgcgaggcg 4588368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 42386908 - 42386979
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||  |||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||    
T  42386908 ctctctggtcacactcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 42386979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 1644340 - 1644235
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||||| | ||  ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||||||||||||||    
T  1644340 aactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgacgtgcaactcg 1644242  T
Q  99 cgaggcg 105  Q
    |||||||    
T  1644241 cgaggcg 1644235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 16104244 - 16104351
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | || ||||||||| |||||||||||||||    
T  16104244 aactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgcgatggcgagcggcgacgtgcaactcg 16104342  T
Q  99 cgaggcggg 107  Q
    |||||||||    
T  16104343 cgaggcggg 16104351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15471388 - 15471497
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||| |||||||| || ||||| ||   | ||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||| ||||||||    
T  15471388 aactcaaaggtcaaaattacgaaatcatgatgcttctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtggaactcgcg 15471487  T
Q  101 aggcggggaa 110  Q
    ||||||||||    
T  15471488 aggcggggaa 15471497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 49389301 - 49389197
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||||| | ||  ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||| ||||||||||    
T  49389301 aactcaaaagtcaaaattacgaaatct-gaatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgatgtgcaactcg 49389203  T
Q  99 cgaggc 104  Q
    ||||||    
T  49389202 cgaggc 49389197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 14234988 - 14235064
Alignment:
Q  35 tctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 111  Q
    ||||||||||  ||| ||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  14234988 tctctggtcacactcactaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 14235064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 14669367 - 14669427
Alignment:
Q  47 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||| ||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  14669367 ctcgcgaggcgagttcaactactcgctatggcgagctgcgacgtgcaactcgcgaggcggg 14669427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 21837983 - 21838076
Alignment:
Q  12 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||||||| ||  ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| | |||||||||||||||||    
T  21837983 caaaatcacaaaatcatgtttcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 21838076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 16097794 - 16097899
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    |||| |||||| |||||||| ||||||||| || | | ||||||||||||||| | |||||||||||    
T  16097794 aactcaaaagtcaaaattacgaaatctggatagctctttggtcatgctcgctatggcgagttcatccgttcgctatggcgagctgcaaggtgcaactcgc 16097893  T
Q  100 gaggcg 105  Q
    ||||||    
T  16097894 gaggcg 16097899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 49667741 - 49667636
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||| |||| ||||||||||||    
T  49667741 aactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagttgcgtcgtgcaactcgc 49667642  T
Q  100 gaggcg 105  Q
     |||||    
T  49667641 aaggcg 49667636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 43927663 - 43927756
Alignment:
Q  12 caaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||||||| ||  ||||| |||||||| ||||||| |||||||   |||||| |||| |||||||||| || ||||||||||||||||    
T  43927663 caaaatcacaaaatcatgtttcctcactggtcaaactcgctatggcgagtga-tctgctcgctacggcgagctgcaacatgcaactcgcgaggcg 43927756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 17524832 - 17524727
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  ||  |||  | ||| |||||| |||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  17524832 aactcaaaagtcaaaaatactgaattctacatgctctctagtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 17524733  T
Q  100 gaggcg 105  Q
    ||||||    
T  17524732 gaggcg 17524727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 22109903 - 22109830
Alignment:
Q  32 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    ||||| ||||||| |||||||| ||||||||| |||||| ||||||||||||||| | |  |||||||||||||    
T  22109903 tcctcactggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcaaggaacaactcgcgaggc 22109830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 52523351 - 52523279
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||||||||||||||    
T  52523351 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 52523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 12171741 - 12171669
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||| |||| ||| |||||||||  ||| | || |||||||||||||| |||||||||||||||||    
T  12171741 ctctctggtcatgctcactatggcgagttcaactgttcgcaatggcgagctgcgaggtgcaactcgcgaggcg 12171669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 32308186 - 32308237
Alignment:
Q  54 ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||| |||  | ||||||||||||||||| |||||||||||||||||    
T  32308186 ggcgagttcatctattcgctatggcgagctgcgaggtgcaactcgcgaggcg 32308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 321596 - 321567
Alignment:
Q  76 ggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||||||||||||||||||||||    
T  321596 ggcgagctgcgacgtgcaactcgcgaggcg 321567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 379353 - 379404
Alignment:
Q  153 tagtgtggcttagcaagacgtttaat---aaaaagggcaagattgtcatttc 201  Q
    ||||||||||||||||||| ||||||   |||||||||||||| ||||||||    
T  379353 tagtgtggcttagcaagacttttaataaaaaaaagggcaagatggtcatttc 379404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 2050825 - 2050753
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||| ||||||||||    
T  2050825 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggg 2050753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 22791798 - 22791846
Alignment:
Q  37 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 85  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  22791798 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 22791846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20867 - 20981
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  20867 aactcaaaagtcaaaatcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 20966  T
Q  101 aggcggggaaaggtt 115  Q
    | |||||||||||||    
T  20967 aagcggggaaaggtt 20981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40375 - 40481
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  40375 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 40474  T
Q  101 aggcggg 107  Q
    |||||||    
T  40475 aggcggg 40481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 2315 - 2429
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  2315 aactcaaaagtcaaaatcacgaaatcttggatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 2414  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  2415 aggcggggaaaggtt 2429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 339608 - 339498
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  339608 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 339509  T
Q  101 aggcggggaaa 111  Q
    |||||||||||    
T  339508 aggcggggaaa 339498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 71750 - 71864
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  71750 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 71849  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  71850 aggcgaggaaaggtt 71864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23390153 - 23390039
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  23390153 aactcaaaagtcaaaatcacgaaatcttggatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 23390054  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  23390053 aggcggggaaaggtt 23390039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25421996 - 25422110
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | ||| || ||||||||||||||||| ||||||||||||    
T  25421996 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctactcgctatggcgagctgcgatgtgcaactcgcg 25422095  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  25422096 aggcggggaaaggtt 25422110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 1096931 - 1097037
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||||| | ||||||||||||    
T  1096931 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtttatctgctcgctatggcgagctgcaaggtgcaactcgcg 1097030  T
Q  101 aggcggg 107  Q
    |||||||    
T  1097031 aggcggg 1097037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20910469 - 20910363
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  20910469 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 20910370  T
Q  101 aggcggg 107  Q
    |||||||    
T  20910369 aggcggg 20910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22119850 - 22119736
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  22119850 aactcaaaagtcaaaatcacaaaattttgcatgctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcg 22119751  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  22119750 aggcgaggaaaggtt 22119736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 24494032 - 24494138
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||||||| | ||||||||||||    
T  24494032 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagctgcaaggtgcaactcgcg 24494131  T
Q  101 aggcggg 107  Q
    |||||||    
T  24494132 aggcggg 24494138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21985804 - 21985700
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||    
T  21985804 aactcaaaagtcaaaatcacgaaatcttgcatgctctctgttcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcagctctcg 21985705  T
Q  101 aggcg 105  Q
    |||||    
T  21985704 aggcg 21985700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25431858 - 25431972
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| | ||| || ||||||| ||||||||||||||||||||||    
T  25431858 aactcaaaagtcaaaatcacgaaatcttgcacgctctctggtcaagctcgctaggcgagtacatctactcgctatggagagctgcgacgtgcaactcgcg 25431957  T
Q  101 aggcggggaaaggtt 115  Q
    |||| || |||||||    
T  25431958 aggcaggaaaaggtt 25431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 22075472 - 22075588
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||   || | || |||||||||||| |||||||||||||     
T  22075472 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcactaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgca 22075571  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||||||||    
T  22075572 aggcggggaaaggttac 22075588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9078416 - 9078518
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||| | | ||||||||||||    
T  9078416 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctacaaggtgcaactcgcg 9078515  T
Q  101 agg 103  Q
    |||    
T  9078516 agg 9078518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 21871228 - 21871114
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| ||||||    
T  21871228 aactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcgcg 21871129  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| || ||||||    
T  21871128 aggcgaggtaaggtt 21871114  T

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Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 21875508 - 21875394
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| ||||||    
T  21875508 aactcaaaagtcaaaatcacgaaatcttgcatgctctcttgtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcgcg 21875409  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| || ||||||    
T  21875408 aggcgaggtaaggtt 21875394  T

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Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19660494 - 19660380
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||   || | || ||||||||||||||||||||||||| |    
T  19660494 aactcaaaagtcaaaaatacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcgtg 19660395  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||| ||||    
T  19660394 aggcggggaagggtt 19660380  T

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Target: chr5; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 24529685 - 24529787
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||| | |||||||||||||   ||||||||||||    
T  24529685 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgttatggcgagctgcagggtgcaactcgcg 24529784  T
Q  101 agg 103  Q
    |||    
T  24529785 agg 24529787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11580902 - 11580795
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||||||| |||||||||||||||||||    
T  11580902 aactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcg 11580804  T
Q  99 cgaggcggg 107  Q
    |||||||||    
T  11580803 cgaggcggg 11580795  T

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Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22107041 - 22106937
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || |||| |||||| |||||||||| |||||||||||||||||| |||| | | | ||||||||||||||||||| ||||||    
T  22107041 aactcaaaagtcaaaaatacgaaattttgcatgctctctggtctagctcgctaggcgagttcatctgttcgttgtggcgagctgcgacgtgcacctcgcg 22106942  T
Q  101 aggcg 105  Q
    |||||    
T  22106941 aggcg 22106937  T

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Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 29916592 - 29916699
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||| |||| ||| ||  |||| |||||| |||||||| ||||||||| | |||| ||||||||||||||||||||||||||||    
T  29916592 aactcaaaagtcaaaatcacgaaat-ttggatagctctatggtcatgctcgctatggcgagttcatttgctcgctatggcgagctgcgacgtgcaactcg 29916690  T
Q  99 cgaggcggg 107  Q
    |||||||||    
T  29916691 cgaggcggg 29916699  T

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Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8286510 - 8286452
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 59  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  8286510 aactcaaaagtcaaaaacacgaaatcttgcatgctctctggtcaagctcgctaggcgag 8286452  T

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Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 24766994 - 24766885
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||| ||||||  ||||||||||| || |||||||| ||||||     ||||||  ||||| |||||||||| |||| ||||||| ||||||    
T  24766994 aactcaaaagtcgaaatcatgaaatcttgcatgctatctggtcaggctcgc-----gagttcaactgctcgctatggcgaactgcaacgtgcacctcgcg 24766900  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  24766899 aggcgaggaaaggtt 24766885  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 21498641 - 21498560
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 115  Q
    |||||| ||||  |||||||||||||||  |||||| ||||||||||||||| | |||||||||||||||| || |||||||    
T  21498641 ctctctagtcacactcgctaggcgagttaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcaggtaaaggtt 21498560  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23201830 - 23201935
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  23201830 aactcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 23201929  T
Q  100 gaggcg 105  Q
    ||||||    
T  23201930 gaggcg 23201935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37724365 - 37724470
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| ||| |||||| ||| |||||| |||| |||||||| |||||||||   || | | | |||||||||| ||||||||||||||    
T  37724365 aactcaaaagtcaaaattacagaatcttacatgctctctagtcatgctcgctatggcgagttcagttgttcgatgtggcgagctgtgacgtgcaactcgc 37724464  T
Q  100 gaggcg 105  Q
    ||||||    
T  37724465 gaggcg 37724470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 21329119 - 21329046
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||| ||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21329119 ctctatggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21329046  T

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Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 31342564 - 31342669
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||||||| |||| ||| |  ||| |||||| |||| |||||||| ||||||||   || || ||| ||||||||||| |||||||||||||    
T  31342564 aactcaaaagtcaaaaacacagaatttgacatgctctctagtcatgctcgctatggcgagttaagctactcgctgtggcgagctgcaacgtgcaactcgc 31342663  T
Q  100 gaggcg 105  Q
    ||||||    
T  31342664 gaggcg 31342669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13095958 - 13096014
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcg 57  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |||||    
T  13095958 aactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaatctcgcaaggcg 13096014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 8286457 - 8286422
Alignment:
Q  76 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 111  Q
    ||||||||||||||||||||||||||||||||||||    
T  8286457 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 8286422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 22144578 - 22144628
Alignment:
Q  66 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtta 116  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||| ||||    
T  22144578 tgcttgctatggcgagctgcaaggtgcaactcgcgaggcgggtaaaagtta 22144628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22959190 - 22959085
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| | |||||||  ||| | ||||||||||||||| | ||||||||||    
T  22959190 aactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatgacgagttcaactgttcgctatggcgagctgcaatgtgcaactcg 22959092  T
Q  99 cgaggcg 105  Q
    |||||||    
T  22959091 cgaggcg 22959085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14079609 - 14079714
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | | | |||||||||||||||||||||||||    
T  14079609 aactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctacggcgagtaacattgttcgttgtggcgagctgcgacgtgcaactcgc 14079708  T
Q  100 gaggcg 105  Q
    ||||||    
T  14079709 gaggcg 14079714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 26011658 - 26011585
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||| ||||||||    
T  26011658 ctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgtgaggcggg 26011585  T

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Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 36154441 - 36154400
Alignment:
Q  66 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  36154441 tgctcgctatggcgagctgcgacatgcaactcgcgaggcggg 36154400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13025774 - 13025830
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcg 57  Q
    ||||||||| |||||||||| ||||||||||| |||||| ||||| ||||| |||||    
T  13025774 aactcaaaattcaaaatcacgaaatcttgcatgctctctagtcaatctcgcaaggcg 13025830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 19669364 - 19669451
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcga 87  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||| | ||||||||| |||||| |||| ||||||||||||    
T  19669364 aactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgcaatggcgagttcatctgctcgctagggcgagctgcga 19669451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 21741164 - 21741116
Alignment:
Q  37 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 85  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  21741164 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 21741116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 22177787 - 22177696
Alignment:
Q  14 aaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||||| ||  ||||| || ||||| ||||||| |||||||   |||||| ||||||||||||||| || |||||||| |||||||    
T  22177787 aaatcacaaaatcatgtttcctcactagtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcacgaggcg 22177696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26742415 - 26742363
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta 53  Q
    |||||||||||||||| | || ||| || ||| ||||||||||||||||||||    
T  26742415 aactcaaaagtcaaaaactcagaattttacatgctctctggtcaagctcgcta 26742363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 717 - 600
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  717 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcg 618  T
Q  101 aggcggggaaaggttacc 118  Q
    ||||||||||| ||||||    
T  617 aggcggggaaaagttacc 600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 167647 - 167530
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  167647 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcg 167548  T
Q  101 aggcggggaaaggttacc 118  Q
    ||||||||||| ||||||    
T  167547 aggcggggaaaagttacc 167530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 52376 - 52490
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| ||     
T  52376 aactcaaaagtcaaaatcaaaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacatgcaacttgca 52475  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  52476 aggcggggaaaggtt 52490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 87; Significance: 8e-42; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 806 - 920
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| |||||||  |  ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  806 aactcaaaagtcaaaatcacgaaatcttaaaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 905  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  906 aggcggggaaaggtt 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3934 - 3985
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgct 52  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3934 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgct 3985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 3987 - 4027
Alignment:
Q  75 tggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 115  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  3987 tggcgagctgcgacgtgcaactcgcgaggcagggaaaggtt 4027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 87; Significance: 8e-42; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 125046 - 125160
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| | |    
T  125046 aactcaaaagtcaaaatcaccaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaacttgtg 125145  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  125146 aggcggggaaaggtt 125160  T

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Target: scaffold0021; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 175228 - 175333
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  175228 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 175327  T
Q  100 gaggcg 105  Q
    ||||||    
T  175328 gaggcg 175333  T

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Target: scaffold0021; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 63025 - 63130
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||| | || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | |||||||||||    
T  63025 aactcaaaagtcaaatttacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgc 63124  T
Q  100 gaggcg 105  Q
    ||||||    
T  63125 gaggcg 63130  T

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Target: scaffold0647 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 5778 - 5662
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||| |||| ||| ||||||||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  5778 aactcaaaagtaaaaaacacgaaatcttgcatgctctctggtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcg 5679  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||| ||||    
T  5678 aggcggggaaagtttac 5662  T

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Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23286314 - 23286430
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  23286314 aactcaaaagtcaaaattacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaacgtgcaactcgcg 23286413  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  23286414 aggcggggaaaagttac 23286430  T

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Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 23654067 - 23653951
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  23654067 aactcaaaagtcaaaattatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcg 23653968  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  23653967 aggcggggaaaagttac 23653951  T

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Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23660486 - 23660592
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  23660486 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 23660585  T
Q  101 aggcggg 107  Q
    |||||||    
T  23660586 aggcggg 23660592  T

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Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27754039 - 27754153
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||||||||  |||||| |||||| ||||||||||||||| ||||||||||||||    
T  27754039 aactcaaaagtcaaaatcacgaaatcttgcatgctatctggtcaagctcgctagcagagttcatctgctcgctatggcgagctgcaacgtgcaactcgcg 27754138  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  27754139 aggcggggaaaggtt 27754153  T

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Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28291959 - 28291857
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  28291959 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 28291860  T
Q  101 agg 103  Q
    |||    
T  28291859 agg 28291857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 298472 - 298369
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||  ||||| ||||||||||| |||||||||||||||||    
T  298472 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctatggcgagttcagctgctcgctatggcgagttgcgacgtgcaactcgc 298373  T
Q  100 gagg 103  Q
    ||||    
T  298372 gagg 298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 23076912 - 23077016
Alignment:
Q  9 agtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgggg 108  Q
    |||||||||||| ||||||||||| |||| |  ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  23076912 agtcaaaatcacgaaatcttgcatgctctgt--tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcatctcgcgaggcgggg 23077009  T
Q  109 aaaggtt 115  Q
    |||||||    
T  23077010 aaaggtt 23077016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 23060817 - 23060908
Alignment:
Q  24 atcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 115  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||    
T  23060817 atcttgcatgctctttggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaacccgcgaggtggggaaaggtt 23060908  T

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Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 20309558 - 20309662
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | | ||||||||||||||| ||||||||||||    
T  20309558 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgatatggcgagctgcgatgtgcaactcgcg 20309657  T
Q  101 aggcg 105  Q
    |||||    
T  20309658 aggcg 20309662  T

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Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22337579 - 22337685
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||| |||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||   ||||| ||| ||    
T  22337579 aactcaaaagtcagaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcatctcacg 22337678  T
Q  101 aggcggg 107  Q
    |||||||    
T  22337679 aggcggg 22337685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22730890 - 22730776
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||| |||||||| |||| |||||| |||||| ||| |||||||||||| ||||| |||||| ||||||||||||| ||| |||||||||||     
T  22730890 aactcaaaagttaaaatcacgaaatattgcatgctctctagtcgagctcgctaggccagttcatctgctcgctatggcgagctacgatgtgcaactcgca 22730791  T
Q  101 aggcggggaaaggtt 115  Q
    ||||||||| |||||    
T  22730790 aggcggggagaggtt 22730776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22737837 - 22737735
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| |||||||||||  ||||| ||||||||||||| |||||||| |||||| |||| |||||||| ||||||| ||||||||    
T  22737837 aactcaaaagtcaaaatcacgaaatcttgcatgatctctagtcaagctcgctacgcgagttcatctgctcgctagggcgagcttcgacgtggaactcgcg 22737738  T
Q  101 agg 103  Q
    |||    
T  22737737 agg 22737735  T

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Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 32451586 - 32451479
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  32451586 aactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgcttgctatggcgagctgcgtcgtgcaactcg 32451488  T
Q  99 cgaggcggg 107  Q
    |||||||||    
T  32451487 cgaggcggg 32451479  T

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Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 37783 - 37680
Alignment:
Q  2 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    |||||||||||||||  || |||| |||||| || ||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||||| ||||    
T  37783 actcaaaagtcaaaaatacgaaattttgcatgctttctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaacttgcga 37684  T
Q  102 ggcg 105  Q
    ||||    
T  37683 ggcg 37680  T

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Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23100888 - 23100785
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||| |||| |||||||||   || | ||| |||| ||||||||||||||||||||    
T  23100888 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcatgcttgctatggcgagttcagttgttcgctgtggctagctgcgacgtgcaactcgc 23100789  T
Q  100 gagg 103  Q
    ||||    
T  23100788 gagg 23100785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22740618 - 22740513
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||| |||  ||| |||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  22740618 aactcaaaagtccaaactacataatcttacatgctctctggtcatgctcgctatggcgagttcggttgttcgctgtggcgagctgcgacgtgcaactcgc 22740519  T
Q  100 gaggcg 105  Q
    ||||||    
T  22740518 gaggcg 22740513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 40621833 - 40621762
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||||||||||||||||   || | | | |||||||||||||||||||||||||||||||    
T  40621833 ctctctggtcaagctcgctaggcgagttcagttgttcgttgtggcgagctgcgacgtgcaactcgcgaggcg 40621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22758373 - 22758268
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||| |||  ||| |||||| ||| ||||||||||| |||||||| |||||||||   || | | | |||||||||||||||||||||||||    
T  22758373 aactcaaaagtccaaactacataatcttacatgctctctggtcatgctcgctatggcgagttcggttgttcgatgtggcgagctgcgacgtgcaactcgc 22758274  T
Q  100 gaggcg 105  Q
    ||||||    
T  22758273 gaggcg 22758268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 7679792 - 7679866
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  7679792 cctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgcgaggcggg 7679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 22133841 - 22133769
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||| |||||||| ||||||||| |||| | |||| | |||||||||||||||||||||| |||||    
T  22133841 ctctctggtcatgctcgctatggcgagttcatctgttcgctacgacgagctgcgacgtgcaactcgcaaggcg 22133769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24658101 - 24658213
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  ||| |||    ||| |||||| ||| ||||||||||||||||||  ||| | |   ||||||||||| |||||||||| |||    
T  24658101 aactcaaaagtcaaaaatacagaattcaacatgctctctagtctagctcgctaggcgagttcaactgttcgtcgtggcgagctgcaacgtgcaacttgcg 24658200  T
Q  101 aggcggggaaagg 113  Q
    |||||||||||||    
T  24658201 aggcggggaaagg 24658213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 23038541 - 23038599
Alignment:
Q  46 gctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    ||||||||||||||| | |||||| | | ||||||||||| ||||||||||||||||||    
T  23038541 gctcgctaggcgagtacatctgctcgttgtggcgagctgcaacgtgcaactcgcgaggc 23038599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 20519711 - 20519670
Alignment:
Q  65 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 106  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  20519711 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 20519670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 22798709 - 22798680
Alignment:
Q  75 tggcgagctgcgacgtgcaactcgcgaggc 104  Q
    ||||||||||||||||||||||||||||||    
T  22798709 tggcgagctgcgacgtgcaactcgcgaggc 22798680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 25176341 - 25176410
Alignment:
Q  36 ctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||  ||||||||||||||   |||||| ||||||| ||||||| | ||||||||| |||||||    
T  25176341 ctctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactcacgaggcg 25176410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 22412648 - 22412612
Alignment:
Q  71 gctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||||| | |||||||||||||||||||    
T  22412648 gctatggcgagctgcaaggtgcaactcgcgaggcggg 22412612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22811592 - 22811488
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| ||||||| |  ||| ||||||||||| ||| |||| |||||||     |||| ||| ||||||||| |||| || |||||||    
T  22811592 aactcaaaagtcaaaattacaaaatttaacatgctctctggtcatgcttgctatggcgagtaagattgctcgctgtggcgagctacgacttgtaactcgc 22811493  T
Q  100 gaggc 104  Q
    |||||    
T  22811492 gaggc 22811488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 23705890 - 23705830
Alignment:
Q  47 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||| |||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  23705890 ctcgataggcgagtgaatctgctcgttatggcgagctgcaaagtgcaactcgcgaggcggg 23705830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 15272 - 15161
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  15272 aactcaaaagtcaaaatcacgatatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtacaactcgcg 15173  T
Q  101 aggcggggaaag 112  Q
    ||||||| ||||    
T  15172 aggcgggtaaag 15161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1113 - 999
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| ||    
T  1113 aactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactcacg 1014  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  1013 aggcggggaaaggtt 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1735 - 1621
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||    
T  1735 aactcaaaagtcaaaatcacagaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcg 1636  T
Q  101 aggcggggaaaggtt 115  Q
    ||||||| |||||||    
T  1635 aggcgggaaaaggtt 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 17665 - 17559
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  17665 aactcaaaagtcaaaatcatgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcg 17566  T
Q  101 aggcggg 107  Q
    |||||||    
T  17565 aggcggg 17559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 13556 - 13670
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||| ||||||||||| ||||||||||||    
T  13556 aactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctattgcgagctgcgatgtgcaactcgcg 13655  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||| ||||||    
T  13656 aggcgggggaaggtt 13670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 34584 - 34688
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||| ||||||||||||||||||    
T  34584 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgcg 34683  T
Q  101 aggcg 105  Q
    |||||    
T  34684 aggcg 34688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 21354 - 21464
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||    
T  21354 aactcaaaagtcaaaattacaaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctcctcgctatggcgagctgcaacgtgcaactcgcg 21453  T
Q  101 aggcggggaaa 111  Q
    |||||||||||    
T  21454 aggcggggaaa 21464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 20083 - 19969
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||    
T  20083 aactcaaaagtcaaattcacgaaatcttgcatgctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcgacatgcaactcgcg 19984  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  19983 aggcgaggaaaggtt 19969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 65451 - 65346
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  |||||||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||    
T  65451 aactcaaaagtcaaaactacaaaatcttacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 65352  T
Q  100 gaggcg 105  Q
    ||||||    
T  65351 gaggcg 65346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 18613 - 18509
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||| ||||||||||    
T  18613 ctcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcaacgtgaaactcgcgag 18514  T
Q  103 gcggg 107  Q
    |||||    
T  18513 gcggg 18509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13265 - 13150
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||||||||||||||||| ||    
T  13265 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggagagttcatctgctcgctgtggcgagctgcgacgtgcaactcacg 13166  T
Q  101 aggcggggaaaggtta 116  Q
    ||||||||||| ||||    
T  13165 aggcggggaaaagtta 13150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 389 - 492
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  389 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 488  T
Q  101 aggc 104  Q
    ||||    
T  489 aggc 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5165 - 5268
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  5165 aactcaaaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 5264  T
Q  101 aggc 104  Q
    ||||    
T  5265 aggc 5268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 16872 - 16761
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||| |||||||||| ||  ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  16872 aactcgaaagtcaaaaacaagaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactcgcg 16773  T
Q  101 aggcggggaaag 112  Q
    ||||||||||||    
T  16772 aggcggggaaag 16761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 79019 - 78905
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||| ||| |||||||||||||| |||||||||| ||||||| ||||||||||   || | || |||| ||||||| ||||||||||||||    
T  79019 aactcaaaagtcagaattacaaaatcttgcatgctctctggtctagctcgcgaggcgagttcaagtgttcgccatggggagctgcaacgtgcaactcgcg 78920  T
Q  101 aggcggggaaaggtt 115  Q
    | |||||||||||||    
T  78919 atgcggggaaaggtt 78905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 368 - 474
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||| | ||||||||||||    
T  368 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggggagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 467  T
Q  101 aggcggg 107  Q
    |||||||    
T  468 aggcggg 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 670 - 556
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||| || ||||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||     
T  670 aactcgaaggtcaaaatcacaaaatcttacaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgca 571  T
Q  101 aggcggggaaaggtt 115  Q
    ||| |||||||||||    
T  570 aggtggggaaaggtt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 79; Significance: 5e-37; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4972 - 5082
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  4972 aactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 5071  T
Q  101 aggcggggaaa 111  Q
    |||||||||||    
T  5072 aggcggggaaa 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12554 - 12664
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  12554 aactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 12653  T
Q  101 aggcggggaaa 111  Q
    |||||||||||    
T  12654 aggcggggaaa 12664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 22506 - 22616
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  22506 aactcaaaagtcaaaatcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 22605  T
Q  101 aggcggggaaa 111  Q
    |||||||||||    
T  22606 aggcggggaaa 22616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25722 - 25608
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||| ||  ||||||||||  |||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  25722 aactcaaaagtcaaaaacatgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctactcgctatggcgagctgcgacgtgcaactcgcg 25623  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  25622 aggcggggaaaggtt 25608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33151 - 33048
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  33151 aactcaaaagtgaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcg 33052  T
Q  101 aggc 104  Q
    ||||    
T  33051 aggc 33048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 10622 - 10732
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | ||||||||||||    
T  10622 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcaagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 10721  T
Q  101 aggcggggaaa 111  Q
    |||||||||||    
T  10722 aggcggggaaa 10732  T

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Target: scaffold0124 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 24308 - 24193
Alignment:
Q  1 aactcaaaagtcaaaa-tcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||    
T  24308 aactcaaaagtcaaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgc 24209  T
Q  100 gaggcggggaaaggtt 115  Q
    |||||| |||||||||    
T  24208 gaggcgaggaaaggtt 24193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23959 - 23856
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||| || ||| ||||||||||||||||||||||||||||||    
T  23959 aactcaaaagtcaaaatcacgaaatcttgcatgctctctagtcaagcttgctaggcgagttcatccgctcgctatggcgagctgcgacgtgcaactcgcg 23860  T
Q  101 aggc 104  Q
    ||||    
T  23859 aggc 23856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 619 - 513
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||   ||||||||||||    
T  619 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgacctgcagggtgcaactcgcg 520  T
Q  101 aggcggg 107  Q
    |||||||    
T  519 aggcggg 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8149 - 8044
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||| || |||||||||| ||||||||||  |||||||||||  ||||||| |||||||     |||| ||||||||||||||||| |||||||||||    
T  8149 aactcacaactcaaaatcacgaaatcttgcaagctctctggtcagactcgctacggcgagtaaacttgctcgctatggcgagctgcgaagtgcaactcgc 8050  T
Q  100 gaggcg 105  Q
    ||||||    
T  8049 gaggcg 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39588 - 39474
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||  |||||| |||| |||||||||||||||||| |||||||||| |||||| |||||||||||||||  ||||| |||||||    
T  39588 aactcaaaagtcaaaatcatgaaatctggcatgctctctggtcaagctcgcgaggcgagttcatctgctcgctatggcgagctgcatcgtgctactcgcg 39489  T
Q  101 aggcggggaaaggtt 115  Q
    |||||||||||||||    
T  39488 aggcggggaaaggtt 39474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40320 - 40422
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| | |||||| |||||||| ||||||   ||||||||||||    
T  40320 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcactaggcgagtacatctgctcgctatggctagctgcagggtgcaactcgcg 40419  T
Q  101 agg 103  Q
    |||    
T  40420 agg 40422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 4799 - 4695
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  4799 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 4700  T
Q  101 aggcg 105  Q
    |||||    
T  4699 aggcg 4695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 6483 - 6371
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 102  Q
    |||||||||||||||||  ||||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  6483 ctcaaaagtcaaaatcatgaaatcttgcattctctatagtcaagctcgctaggcgagttcatctgctcgctatggcgaggtgcgacgtgcaactcgcgag 6384  T
Q  103 gcggggaaaggtt 115  Q
    |||| | ||||||    
T  6383 gcggagcaaggtt 6371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 14941 - 15057
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || |||| |||||||||||| ||||||||||||||    
T  14941 aactctaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgtttgccatggcgagctgcaacgtgcaactcgcg 15040  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  15041 aggcggggaaaagttac 15057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8939 - 9022
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctg 84  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8939 aactcaaaagtcaaaatcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctg 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 494 - 605
Alignment:
Q  4 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 103  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||     
T  494 tcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaga 593  T
Q  104 cggggaaaggtt 115  Q
     | |||||||||    
T  594 agaggaaaggtt 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10608 - 10711
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  10608 aactcaaaggtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcg 10707  T
Q  101 aggc 104  Q
    ||||    
T  10708 aggc 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2742 - 2636
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||  |||||||||||||| | |||||||||| |    
T  2742 aactcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcaaggtgcaactcgtg 2643  T
Q  101 aggcggg 107  Q
    |||||||    
T  2642 aggcggg 2636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8190 - 8076
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| || ||||||  |||||||||||||||| |||||||| |||    
T  8190 aactcaaaagtcaaaatcacgaaatcttgcatgctctttggtcaagctcgctaggcgagctcatctgctccctatggcgagctgcgatgtgcaacttgcg 8091  T
Q  101 aggcggggaaaggtt 115  Q
    ||| ||| |||||||    
T  8090 aggtgggaaaaggtt 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 79989 - 79887
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||  || || ||||||||||||||| ||||||||||||||    
T  79989 aactcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaacttctcgctatggcgagctgcaacgtgcaactcgcg 79890  T
Q  101 agg 103  Q
    |||    
T  79889 agg 79887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2405 - 2521
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||| ||||| |||  |||||||    
T  2405 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgctcgctatggcgagttgcgaggtgttactcgcg 2504  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||| |||||||||    
T  2505 aggcgggaaaaggttac 2521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 16732 - 16836
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||| |||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  16732 aacttaaaagtcaaaagtacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcg 16831  T
Q  101 aggcg 105  Q
    |||||    
T  16832 aggcg 16836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 105
Target Start/End: Original strand, 16881 - 16911
Alignment:
Q  75 tggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||||||||||||||||||    
T  16881 tggcgagctgcgacgtgcaactcgcgaggcg 16911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16122 - 16238
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| ||||||||||||||    
T  16122 aactctaaagtcaaaattacaaaatcttgcatgctctctggtctagctcgctaggcgagttcaattgttcgccatggcgagctgcaacgtgcaactcgcg 16221  T
Q  101 aggcggggaaaggttac 117  Q
    ||||||||||| |||||    
T  16222 aggcggggaaaagttac 16238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1801 - 1906
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || ||||||| ||| ||||||||||  |||||||| |||||||||   || |  || ||||||| |||||||||||||||||    
T  1801 aactcaaaagtcaaaattacgaaatcttacatgctctctggtcctgctcgctatggcgagttcaattgttcactgtggcgagttgcgacgtgcaactcgc 1900  T
Q  100 gaggcg 105  Q
    ||||||    
T  1901 gaggcg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 46390 - 46500
Alignment:
Q  2 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || ||||||||||    
T  46390 actcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcga 46489  T
Q  102 ggcggggaaag 112  Q
    |||||| ||||    
T  46490 ggcgggtaaag 46500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 32615 - 32510
Alignment:
Q  2 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || ||||||||||    
T  32615 actcaaaagtcaaaatcacgaaatcttgcaagctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcga 32516  T
Q  102 ggcggg 107  Q
    ||||||    
T  32515 ggcggg 32510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 16550 - 16656
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||||   ||||||||||| |||||| ||||||||||||||| || ||| | |||| | |||||||||||||   |||||||| |||    
T  16550 aactcaaaagtcaaaatcttgaaatcttgcatgctctctcgtcaagctcgctaggtgatttcatttgctcgttatggcgagctgcatggtgcaacttgcg 16649  T
Q  101 aggcggg 107  Q
    |||||||    
T  16650 aggcggg 16656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20576 - 20682
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||   ||||||||| ||    
T  20576 aactcagaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatccgctcgctatggcgagctgcagggtgcaactcacg 20675  T
Q  101 aggcggg 107  Q
    |||||||    
T  20676 aggcggg 20682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4987 - 5093
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||| ||| |||| ||||||||||  ||||||||||||| ||||||||||||||| |||||| ||||||||||||||| | ||||||||||||    
T  4987 aactcaaaagttaaagtcacgaaatcttgcaagctctctggtcaagatcgctaggcgagttcatctgctcgctatggcgagctgcaatgtgcaactcgcg 5086  T
Q  101 aggcggg 107  Q
    |||||||    
T  5087 aggcggg 5093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 10091 - 9990
Alignment:
Q  4 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 103  Q
    |||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||    
T  10091 tcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgagg 9992  T
Q  104 cg 105  Q
    ||    
T  9991 cg 9990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 720 - 616
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || |||||||| || |||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||| ||    
T  720 aactcaaaagtcaaaaatacgaaatcttgaatgctctctggtctagctcgctaggcgagttcatatgtttgctatggcgagctgcgacgtgcaactcacg 621  T
Q  101 aggcg 105  Q
    |||||    
T  620 aggcg 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13948 - 14051
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||| ||||| |||| | |||||||||||||||||| |||||||||||    
T  13948 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcaagttcatctgttcgctatggcgagctgcgacatgcaactcgcg 14047  T
Q  101 aggc 104  Q
    ||||    
T  14048 aggc 14051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 17381 - 17267
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||  |  | || |||||||||||| ||||||||||||||    
T  17381 aactcaaaagtcaaaattacaaaatcttgcatgctctcttgtctagctcgctaggcgagttccagttttcgccatggcgagctgcaacgtgcaactcgcg 17282  T
Q  101 aggcggggaaaggtt 115  Q
    || ||||||| ||||    
T  17281 agacggggaagggtt 17267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10374 - 10488
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||||||||||| ||| |||||| |||| |||||| ||||||||||  || || |||||||| |||||| |||||||||||| |    
T  10374 aactcaaaagtcaaaatcacaaaatcttacatgctctctagtcaggctcgcgaggcgagttcaactactcgctatggcaagctgcaacgtgcaactcgtg 10473  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  10474 aggcgaggaaaggtt 10488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15087 - 14981
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||| |||||||| ||||||||||| |||||| ||||||||||| || |||||||  ||||| |||||||| |||||| ||||||||||||||    
T  15087 aactcaaaagtgaaaatcacgaaatcttgcatgctctctagtcaagctcgcgagacgagttcaactgctcgctatggcaagctgcaacgtgcaactcgcg 14988  T
Q  101 aggcggg 107  Q
    |||||||    
T  14987 aggcggg 14981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 10929 - 10825
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||| ||||     
T  10929 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacttgcaattcgca 10830  T
Q  101 aggcg 105  Q
    |||||    
T  10829 aggcg 10825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5301 - 5417
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| |||||||||||||| |||||| ||| ||||||| ||||||||||   || | || ||||||||||||  |||||||||||||    
T  5301 aactcaaaagtcaaaattacaaaatcttgcatgctctctagtctagctcgcaaggcgagttcaagtgttcgccatggcgagctgcaccgtgcaactcgcg 5400  T
Q  101 aggcggggaaaggttac 117  Q
    |||| ||||||||||||    
T  5401 aggctgggaaaggttac 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 12464 - 12360
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 102  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||  || || ||||||||||| ||||||||| | ||||||||    
T  12464 ctcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactactcgctatggcgagttgcgacgtgaagctcgcgag 12365  T
Q  103 gcggg 107  Q
    |||||    
T  12364 gcggg 12360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2102 - 1986
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||| ||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||   || | ||  |||| |||||| ||||||||||||||    
T  2102 aactcaacagtcaaaattacaaaatcttgcatgctctctagtctagctcgctaggcgagttcaagtgttcgccgtggcaagctgcaacgtgcaactcgcg 2003  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||||||||    
T  2002 aggcggggaaaggttac 1986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 47439 - 47543
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||| |  || ||||||||||| |||||||||| |||||||||||||||||| | || | ||||||||||||||| ||||||||||||||    
T  47439 aactcaaaagtcaacaatacgaaatcttgcatgctctctggtctagctcgctaggcgagttcatttgttcgctatggcgagctgcaacgtgcaactcgcg 47538  T
Q  101 aggcg 105  Q
    |||||    
T  47539 aggcg 47543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1992 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 256 - 373
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||| ||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| |||| |||||||||||||||||||||||    
T  256 aactcaaaagtctaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctaaggcgagctgcgacgtgcaactcg 354  T
Q  99 cgaggcggggaaaggttac 117  Q
    ||||||||||||| |||||    
T  355 cgaggcggggaaaagttac 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16256 - 16150
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||||||| |||||||||   |||| |||||||||||||||||| ||||| |||||| |||||||||| |||| | || |||||||||    
T  16256 aactcaaaagtcaaaatcacgaaatcttgctagctctgtggtcaagctcgctaggcaagttcatctgctcgctatggcgatctgcaaggtacaactcgcg 16157  T
Q  101 aggcggg 107  Q
    |||||||    
T  16156 aggcggg 16150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 28933 - 28821
Alignment:
Q  5 caaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    ||||||||||||| |||||||||||||| |||||| ||| ||||||||||| ||||||   || | ||  ||||||||||| ||||||| ||||||||||    
T  28933 caaaagtcaaaattacaaaatcttgcatgctctctagtctagctcgctaggtgagttcaagtgttcgccgtggcgagctgcaacgtgcacctcgcgaggc 28834  T
Q  105 ggggaaaggttac 117  Q
    |||||||||||||    
T  28833 ggggaaaggttac 28821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 7641 - 7572
Alignment:
Q  38 ctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||| ||||||||||| ||||| |||||| ||||||||||||| |   |||||||||||||||||||    
T  7641 ctggtcatgctcgctaggcaagttcatctgctcgctatggcgagctacatggtgcaactcgcgaggcggg 7572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 17244 - 17351
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  17244 aactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcg 17342  T
Q  99 cgaggcggg 107  Q
     ||||||||    
T  17343 tgaggcggg 17351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15133 - 15029
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||| |||||||||||  || ||||||||||| |||||||||| |||||||||||||||||| || | | || |||| ||||||||||||||||||||||    
T  15133 aacttaaaagtcaaaaatacgaaatcttgcatgctctctggtccagctcgctaggcgagttcatcagttcgcgatggtgagctgcgacgtgcaactcgcg 15034  T
Q  101 aggcg 105  Q
    |||||    
T  15033 aggcg 15029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 32933 - 32829
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||||||||| |||||||| ||||||||| || | | |  ||||| |||||||||||||||||||||    
T  32933 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtctagctcgcttggcgagttcatcagttcgagatggctagctgcgacgtgcaactcgcg 32834  T
Q  101 aggcg 105  Q
    |||||    
T  32833 aggcg 32829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32517 - 32633
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| |||| ||||| ||||||||||||||||||   || |  |  ||||||||||| ||||||||||||||    
T  32517 aactcaaaagtcaaaaatacgaaatcttgcatgctctttggtctagctcgctaggcgagttcaagtgttcaccgtggcgagctgcaacgtgcaactcgcg 32616  T
Q  101 aggcggggaaaggttac 117  Q
    |||||||||||||||||    
T  32617 aggcggggaaaggttac 32633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 17244 - 17171
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  17244 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 17171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 39229 - 39330
Alignment:
Q  7 aaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 106  Q
    ||||||||||| || ||||||||||| ||||||||||||||||||||||||||| | ||||||           ||||||||||||||||||||||||||    
T  39229 aaagtcaaaattacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgct----------cgctgcgacgtgcaactcgcgaggcgg 39318  T
Q  107 ggaaaggttacc 118  Q
    ||||||||||||    
T  39319 ggaaaggttacc 39330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1043 - 1146
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  || ||||||||||| ||||||||||||||| ||||||||||||   ||||| ||  ||||||| ||| ||||||||||||||    
T  1043 aactcaaaagtcaaaaatacgaaatcttgcatgctctctggtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcaactcgcg 1142  T
Q  101 aggc 104  Q
    ||||    
T  1143 aggc 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 10192 - 10108
Alignment:
Q  34 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 117  Q
    |||||||||||  ||||| | ||||||||| |||| | ||||||||||||||| | ||||||||||||||||| ||||| |||||    
T  10192 ctctctggtcacactcgcgatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcgaggaaaagttac 10108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 1744 - 1844
Alignment:
Q  6 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    |||||||||||  || ||||||||||| ||||||||| | |||||||| |||||||||  ||| | ||| ||||||||||||||||||||||||||||||    
T  1744 aaaagtcaaaaatacgaaatcttgcatgctctctggttatgctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggc 1843  T
Q  105 g 105  Q
    |    
T  1844 g 1844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 7721 - 7821
Alignment:
Q  6 aaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    |||||||||||  || ||||||||||| ||||||||| | |||||||| |||||||||  ||| | ||| ||||||||||||||||||||||||||||||    
T  7721 aaaagtcaaaaatacgaaatcttgcatgctctctggttatgctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggc 7820  T
Q  105 g 105  Q
    |    
T  7821 g 7821  T

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Target: scaffold0106; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 16114 - 16213
Alignment:
Q  4 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 102  Q
    |||||||||||||  || |||||||| || ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||||||    
T  16114 tcaaaagtcaaaaatacgaaatcttggatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgag 16213  T

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Target: scaffold0628 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 2427 - 2353
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgggg 108  Q
    |||||||||||  |||||||||||| ||| |||| | || |||||||||||||||||||||||||||||||||||    
T  2427 ctctctggtcatactcgctaggcgaattcatctgttcgcaatggcgagctgcgacgtgcaactcgcgaggcgggg 2353  T

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Target: scaffold0309 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 7063 - 7168
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||  |  ||||||||| | |||||||||| ||||||||||||||||| | ||||| ||||||||||| ||||| |||  |||||||    
T  7063 aactcaaaagtcaaaaatatgaaatcttgcgtgctctctggtctagctcgctaggcgagtt-cactgctcgctatggcgagttgcgaggtgttactcgcg 7161  T
Q  101 aggcggg 107  Q
    |||||||    
T  7162 aggcggg 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 190939 - 190833
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||| |||| |||||||||| || ||| ||||||||||||||| |||||   |||||  |||||||||| ||| |||||||  |||||    
T  190939 aactcaaaagtcaaaaacacagaatcttgcatgctatctagtcaagctcgctaggtgagttaggctgctcactatggcgagttgcaacgtgcaggtcgcg 190840  T
Q  101 aggcggg 107  Q
    |||||||    
T  190839 aggcggg 190833  T

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Target: scaffold0017; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 192642 - 192536
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||| |||| |||||||||| || ||| ||||||||||||||| |||||   |||||  |||||||||| ||| |||||||  |||||    
T  192642 aactcaaaagtcaaaaacacagaatcttgcatgctatctagtcaagctcgctaggtgagttaggctgctcactatggcgagttgcaacgtgcaggtcgcg 192543  T
Q  101 aggcggg 107  Q
    |||||||    
T  192542 aggcggg 192536  T

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Target: scaffold0503 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 12395 - 12499
Alignment:
Q  4 tcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    ||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| ||||||||| |||||| ||||||||| |||||||||||||||||  ||    
T  12395 tcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgggctgcgacgtgcaactcatga 12493  T
Q  102 ggcggg 107  Q
    ||||||    
T  12494 ggcggg 12499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 28466 - 28361
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| |||||||||||||    
T  28466 aactcaaaagtcaaaagtacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgc 28367  T
Q  100 gaggcg 105  Q
    ||||||    
T  28366 gaggcg 28361  T

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Target: scaffold0130 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 29001 - 29054
Alignment:
Q  2 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctagg 55  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  29001 actcaaaagtcaaaatcacgaaatcttgcatgctctctggtcaagctcgctagg 29054  T

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Target: scaffold0075 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7951 - 7890
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 62  Q
    |||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||    
T  7951 aactcaaaagtcaaaatcacaaaatcttgcatgctctctagtcaggctcgcgaggcgagttc 7890  T

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Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 70257 - 70362
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  | |||||||||||| ||||||||||| |||||||| || |||||    || | ||| |||||||||||||||||||||||||    
T  70257 aactcaaaagtcaaaactataaaatcttgcatgctctctggtcatgctcgctatggtgagtttagttgttcgctgtggcgagctgcgacgtgcaactcgc 70356  T
Q  100 gaggcg 105  Q
    ||||||    
T  70357 gaggcg 70362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 51541 - 51438
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    |||||||||||||||||||| |||| ||| ||  ||||||||||| |||||||| |||||||||  ||||| ||||| | ||||||||||||||||||||    
T  51541 aactcaaaagtcaaaatcacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcagctgctcgctatcgtgagctgcgacgtgcaactcg 51443  T
Q  99 cgagg 103  Q
    |||||    
T  51442 cgagg 51438  T

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Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 33033 - 33105
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||||||||||||||    
T  33033 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaatgtgcaactcgcgaggcggg 33105  T

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Target: scaffold1137 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 1925 - 1854
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||| ||||| ||||||||||||||||| |||  | ||||||||||||| |||||||||||||||||||||    
T  1925 ctctcaggtcatgctcgctaggcgagttcatctattcgctatggcgagctacgacgtgcaactcgcgaggcg 1854  T

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Target: scaffold0810 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3396 - 3503
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||| | |    ||||||||||| |||||||| ||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  3396 aactcaaaagtcaaaattacgaaatatggatagctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagttgcgaggtgcaactcgc 3495  T
Q  100 gaggcggg 107  Q
     |||||||    
T  3496 aaggcggg 3503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7000 - 7103
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||||  |||||||||||    
T  7000 aactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcggggtgcaactcgc 7099  T
Q  100 gagg 103  Q
    ||||    
T  7100 gagg 7103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2301 - 2196
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | ||||||||||    
T  2301 aactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcg 2203  T
Q  99 cgaggcg 105  Q
    |||||||    
T  2202 cgaggcg 2196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36049 - 35935
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || |||||  |  | ||| |||||  |||||||||||||||| | |||||| ||| ||||||||||| | ||||||||||||    
T  36049 aactcaaaagtcaaaattacgaaatcaaggttgctcactggttgagctcgctaggcgagtacatctgctcgctgtggcgagctgcaaagtgcaactcgcg 35950  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| || ||||||    
T  35949 aggcgagggaaggtt 35935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9491 - 9382
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||| ||||||  ||||||||||| || |||||||| ||||||     ||||||  ||||| |||||||||| |||| ||||||| ||||||    
T  9491 aactcaaaagtcgaaatcatgaaatcttgcatgctatctggtcaggctcgc-----gagttcaactgctcgctatggcgaactgcaacgtgcacctcgcg 9397  T
Q  101 aggcggggaaaggtt 115  Q
    ||||| |||||||||    
T  9396 aggcgaggaaaggtt 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 19308 - 19370
Alignment:
Q  53 aggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 115  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  19308 aggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 19370  T

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Target: scaffold0556 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7275 - 7378
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| ||||||||| |||| | ||||||| ||||||| | |||||||||||    
T  7275 aactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggagagctgcaaggtgcaactcgc 7374  T
Q  100 gagg 103  Q
    ||||    
T  7375 gagg 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 8513 - 8586
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||  ||||||||    
T  8513 ctctctggtcacactcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcatgaggcggg 8586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 19730 - 19837
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||| |||||||||| ||||||||| |    ||||||||||| |||||| | | ||| ||| |||| | ||||||||||||||||| |||||||||||    
T  19730 aactcagaagtcaaaattacaaaatctagatagctctctggtcatgctcgcaatgacgaattcatctgttcgctatggcgagctgcgaggtgcaactcgc 19829  T
Q  100 gaggcggg 107  Q
    ||||||||    
T  19830 gaggcggg 19837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 101858 - 101965
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||| ||||| || ||||||   |  ||||||||||| |||| ||| ||||||||| || | | ||||||||| |||||||||||||||||||    
T  101858 aactcaaaagtaaaaattacgaaatctgaaaagctctctggtcatgctcactatggcgagttcatcagttcgctatggcgtgctgcgacgtgcaactcgc 101957  T
Q  100 gaggcggg 107  Q
    ||||||||    
T  101958 gaggcggg 101965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 1 - 55
Alignment:
Q  51 ctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||| || |||| | |||||||||||||||||||||||||||||||||||    
T  1 ctaggcgagatcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 55  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 130371 - 130469
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||||| |    ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||| ||||||||||    
T  130371 aactcaaaagtcaaaattacgaaatctggatagctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgaggtgcaactcg 130469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 1 - 54
Alignment:
Q  9 agtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 62  Q
    |||||||||||| ||||||||||  ||||||||||||||||||| |||||||||    
T  1 agtcaaaatcacgaaatcttgcaagctctctggtcaagctcgctcggcgagttc 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 1923 - 1850
Alignment:
Q  34 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    |||||||||||  ||||||||||||||   |||||| |||||||||| |||| | |||||||||||||||||||    
T  1923 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgaactgcaaggtgcaactcgcgaggcggg 1850  T

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Target: scaffold0324 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15862 - 15967
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||| ||||||||    
T  15862 aactcaaaagtcaaaaatacagaattctacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgttcaactcgc 15961  T
Q  100 gaggcg 105  Q
    ||||||    
T  15962 gaggcg 15967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 16779 - 16674
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||||||||||| |||| |||  | ||| ||||||||||| |||||||| |||||||     |||||||||||||||||| |||| || |||||||    
T  16779 aactcaaaagtcaaaaacacagaattctacatgctctctggtcatgctcgctatggcgagtaaagttgcttgctatggcgagctacgacttgtaactcgc 16680  T
Q  100 gaggcg 105  Q
    ||||||    
T  16679 gaggcg 16674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 52032 - 52136
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||| ||||  || ||||||||||  ||| ||||||| |||||||| |||||| || |||| | |||||||||| ||||||||||||||||||    
T  52032 aactcaaaagtaaaaaatacgaaatcttgcaagctc-ctggtcatgctcgctatggcgagctcatctgttcgctatggcgatctgcgacgtgcaactcgc 52130  T
Q  100 gaggcg 105  Q
     |||||    
T  52131 taggcg 52136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 8297 - 8369
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| | || ||||||||||||||    
T  8297 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtccaactcgcgaggcg 8369  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 13450 - 13510
Alignment:
Q  47 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  13450 ctcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 13510  T

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Target: scaffold0138; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 29876 - 29771
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||| |||||||||||| |||||||||| ||| |||||||  | ||||||||| |||||||     |||| |||||||||||||||   |||||||||||    
T  29876 aactaaaaagtcaaaattacaaaatcttacatgctctctgccctagctcgctatggcgagtaaggttgctcgctatggcgagctgcattgtgcaactcgc 29777  T
Q  100 gaggcg 105  Q
    ||||||    
T  29776 gaggcg 29771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41872 - 41767
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||| |||||||||||| |||||||||| ||| |||||||  | ||||||||| |||||||     ||||| || |||||||||||   |||||||||||    
T  41872 aactaaaaagtcaaaattacaaaatcttacatgctctctgccctagctcgctatggcgagtaaggttgctttctttggcgagctgcattgtgcaactcgc 41773  T
Q  100 gaggcg 105  Q
    ||||||    
T  41772 gaggcg 41767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 161149 - 161260
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatc-ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 98  Q
    ||||||||||||||||| || |||| ||| ||  ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||   |||||||| |    
T  161149 aactcaaaagtcaaaattacgaaat-ttggatagctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcatggtgcaactag 161247  T
Q  99 cgaggcggggaaa 111  Q
    ||||||| |||||    
T  161248 cgaggcgaggaaa 161260  T

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Target: scaffold0507 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 7678 - 7608
Alignment:
Q  37 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||  ||||||||||||||   ||||||  |||||||||||||||| ||||||||| |||||||||    
T  7678 tctggtcacactcgctaggcgagtgaatctgctccctatggcgagctgcgaggtgcaactcacgaggcggg 7608  T

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Target: scaffold0078 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 11028 - 11098
Alignment:
Q  37 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||||||||| |||||||    
T  11028 tctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcaaggcggg 11098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8615 - 8510
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    |||||||| |||||||  ||  ||| || ||| ||||||||||| ||||| || |||||||||   || | ||| |||||||||||||||||||||||||    
T  8615 aactcaaaggtcaaaaataccgaattttacatgctctctggtcatgctcggtatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgc 8516  T
Q  100 gaggcg 105  Q
    ||||||    
T  8515 gaggcg 8510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 80863 - 80904
Alignment:
Q  64 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  80863 tctgcttgctatggcgagctgcaaggtgcaactcgcgaggcg 80904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 597 - 697
Alignment:
Q  4 tcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 103  Q
    |||||||||||||| || |||||| |    |||||||||||  ||||||||||||||   |||||| ||||||| ||||| | | |||||||||||||||    
T  597 tcaaaagtcaaaattacgaaatctggatagctctctggtcacactcgctaggcgagtgaatctgctcgctatggagagctacaaggtgcaactcgcgagg 696  T
Q  104 c 104  Q
    |    
T  697 c 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 4181 - 4285
Alignment:
Q  2 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||| ||||||    
T  4181 actcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcacctcgcg 4280  T
Q  101 aggcg 105  Q
    |||||    
T  4281 aggcg 4285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 8612 - 8716
Alignment:
Q  2 actcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    |||||||||||||||  ||| |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||| ||||||    
T  8612 actcaaaagtcaaaagtacagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcacctcgcg 8711  T
Q  101 aggcg 105  Q
    |||||    
T  8712 aggcg 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36919 - 37023
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcg 100  Q
    ||||||||||||||||| || |||||  |  | ||| |||||  ||||||||||| |||| |   || | ||| ||||||||||||||||||||||||||    
T  36919 aactcaaaagtcaaaattacgaaatcaaggttgctcactggttgagctcgctaggtgagtacagttgttcgctgtggcgagctgcgacgtgcaactcgcg 37018  T
Q  101 aggcg 105  Q
    |||||    
T  37019 aggcg 37023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 9542 - 9641
Alignment:
Q  3 ctcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 101  Q
    |||||||||||||| |||| |||||||||| |||||||||| | ||||||| |||||||     |||| ||| |||||||||||  || |||||||||||    
T  9542 ctcaaaagtcaaaaacacagaatcttgcatgctctctggtctaactcgctatggcgagtaggattgctcgctgtggcgagctgcatcgcgcaactcgcga 9641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 7109 - 7180
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    ||||||||||||  ||||||| ||||||   |||||| ||||||||||||||| | ||||| ||||||||||    
T  7109 cctctctggtcacactcgctaagcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 7180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 14489 - 14560
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 104  Q
    ||||||||||||  ||||||| ||||||   |||||| ||||||||||||||| | ||||| ||||||||||    
T  14489 cctctctggtcacactcgctaagcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 14560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 9049 - 8986
Alignment:
Q  47 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 110  Q
    |||||||||||| |   |||||| ||||||||||||||| | |||||||| |||||||||||||    
T  9049 ctcgctaggcgactgaatctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggggaa 8986  T

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Target: scaffold0139 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20444 - 20487
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtca 44  Q
    ||||||||||||||||  |||||||||||||| |||||||||||    
T  20444 aactcaaaagtcaaaactacaaaatcttgcatgctctctggtca 20487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 21389 - 21359
Alignment:
Q  75 tggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||||||||||||||||||    
T  21389 tggcgagctgcgacgtgcaactcgcgaggcg 21359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 105
Target Start/End: Complemental strand, 29281 - 29251
Alignment:
Q  75 tggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||||||||||||||||||    
T  29281 tggcgagctgcgacgtgcaactcgcgaggcg 29251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 103178 - 103136
Alignment:
Q  65 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 107  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  103178 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 103136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 15455 - 15389
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||| ||||||| | |||||||||||    
T  15455 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggggagctgcaaggtgcaactcgc 15389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 179157 - 179217
Alignment:
Q  45 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 105  Q
    |||||||||||||||| |   || | ||| |||||||||||| ||||||||||||||||||    
T  179157 agctcgctaggcgagtacaattgttcgctgtggcgagctgcgtcgtgcaactcgcgaggcg 179217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 653 - 576
Alignment:
Q  33 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 110  Q
    ||||||||||||  |||||||||||| |   |||| | ||||||||||| ||| | |||||||||| |||||||||||    
T  653 cctctctggtcacactcgctaggcgattgaatctggtcgctatggcgagttgcaaggtgcaactcgtgaggcggggaa 576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 18111 - 18006
Alignment:
Q  1 aactcaaaagtcaaaatcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 99  Q
    ||||| ||||||||||| | | |||  | ||| ||||||||||| |||||||| |||||||  |  || | ||| |||| ||||||||||||||||||||    
T  18111 aactctaaagtcaaaattatagaattctacatgctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcaagctgcgacgtgcaactcgc 18012  T
Q  100 gaggcg 105  Q
    ||||||    
T  18011 gaggcg 18006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 3264 - 3335
Alignment:
Q  32 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 103  Q
    ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| || ||||||||||||||    
T  3264 tcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcgcgagg 3335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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