View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0573_high_10 (Length: 260)
Name: NF0573_high_10
Description: NF0573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0573_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 3430127 - 3430369
Alignment:
| Q |
8 |
ataattttctatcaaattttatttatctctaatgtgcgaaacgttgaattatcaagttttatgtttctttattagttctaacatttcaagaaactacgtt |
107 |
Q |
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| T |
3430127 |
ataattttctatcaaattttatttatctctaatgtgcgaaacgttgaattatcaagttttatgtttctttattagttctaacatttcaaggaactacgtt |
3430226 |
T |
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| Q |
108 |
aactttattagacttgagaaagattcacatatatcgtattcgattgcttttgaatttcactatttctcattcggctaaaccttaattcgactgcttgccg |
207 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3430227 |
aactttattagacttgagaaagattcatatatatcgtattcgattgcttttgaatttcactatttctcattcggctaaaccttaattcgactgcttgccg |
3430326 |
T |
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| Q |
208 |
ttcttggctaacaacataactatttttagatatatacaatatt |
250 |
Q |
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| T |
3430327 |
ttcttggctaacaacataactatttttagatatatacaatatt |
3430369 |
T |
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