View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0576_high_1 (Length: 416)

Name: NF0576_high_1
Description: NF0576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0576_high_1
NF0576_high_1
[»] chr8 (51 HSPs)
chr8 (33-121)||(23122603-23122698)
chr8 (33-121)||(504127-504222)
chr8 (32-121)||(40423949-40424045)
chr8 (56-121)||(14547951-14548016)
chr8 (56-121)||(15197362-15197427)
chr8 (57-121)||(12831077-12831141)
chr8 (56-121)||(37038508-37038573)
chr8 (34-121)||(1179946-1180040)
chr8 (172-216)||(5957967-5958011)
chr8 (222-282)||(9271126-9271186)
chr8 (317-372)||(13906598-13906653)
chr8 (172-218)||(4854780-4854826)
chr8 (317-374)||(5904351-5904409)
chr8 (56-106)||(5957859-5957909)
chr8 (172-218)||(8841349-8841395)
chr8 (172-213)||(504043-504084)
chr8 (60-121)||(8841438-8841499)
chr8 (172-213)||(23122519-23122560)
chr8 (33-121)||(34012302-34012397)
chr8 (172-217)||(42354506-42354551)
chr8 (172-217)||(43414499-43414544)
chr8 (57-121)||(10284637-10284701)
chr8 (222-272)||(31829304-31829354)
chr8 (317-374)||(1360112-1360169)
chr8 (172-217)||(10284549-10284594)
chr8 (172-213)||(12831184-12831225)
chr8 (172-217)||(15048099-15048144)
chr8 (56-121)||(15048188-15048252)
chr8 (229-282)||(32985791-32985844)
chr8 (172-213)||(34012218-34012259)
chr8 (317-369)||(38289212-38289265)
chr8 (172-220)||(32707918-32707966)
chr8 (172-220)||(37038616-37038664)
chr8 (348-387)||(10310329-10310368)
chr8 (253-284)||(28702034-28702065)
chr8 (172-219)||(32032861-32032908)
chr8 (231-282)||(32986638-32986689)
chr8 (335-374)||(43456648-43456687)
chr8 (317-374)||(4259919-4259977)
chr8 (317-374)||(22652743-22652801)
chr8 (172-214)||(40423864-40423906)
chr8 (77-107)||(44507107-44507137)
chr8 (327-368)||(10162036-10162077)
chr8 (172-213)||(14548059-14548100)
chr8 (172-217)||(15258847-15258892)
chr8 (180-217)||(20074870-20074907)
chr8 (172-213)||(42710216-42710257)
chr8 (317-369)||(43413863-43413916)
chr8 (77-121)||(9122235-9122279)
chr8 (172-220)||(16056316-16056364)
chr8 (327-374)||(45536778-45536826)
[»] chr4 (57 HSPs)
chr4 (34-121)||(41236347-41236441)
chr4 (34-121)||(48183055-48183149)
chr4 (32-121)||(11511468-11511564)
chr4 (56-121)||(50052434-50052499)
chr4 (34-121)||(29234251-29234345)
chr4 (34-121)||(29239886-29239980)
chr4 (231-282)||(39669613-39669664)
chr4 (32-121)||(6034042-6034138)
chr4 (32-121)||(54473539-54473635)
chr4 (57-121)||(480453-480517)
chr4 (57-121)||(23608265-23608329)
chr4 (56-120)||(50526178-50526242)
chr4 (178-217)||(3481787-3481826)
chr4 (172-218)||(41824019-41824065)
chr4 (56-121)||(24995113-24995178)
chr4 (172-217)||(29240023-29240068)
chr4 (172-213)||(48182971-48183012)
chr4 (172-217)||(50052346-50052391)
chr4 (222-282)||(13793525-13793585)
chr4 (222-282)||(13793966-13794026)
chr4 (77-121)||(42044373-42044417)
chr4 (231-287)||(51956347-51956403)
chr4 (317-372)||(13210136-13210191)
chr4 (172-215)||(40574916-40574959)
chr4 (317-374)||(11491196-11491254)
chr4 (56-121)||(3481683-3481748)
chr4 (229-282)||(5127325-5127378)
chr4 (172-213)||(6034181-6034222)
chr4 (172-217)||(31910329-31910374)
chr4 (172-213)||(41236484-41236525)
chr4 (172-213)||(53352496-53352537)
chr4 (334-377)||(22525445-22525489)
chr4 (327-374)||(40406947-40406995)
chr4 (77-121)||(41823932-41823976)
chr4 (327-374)||(46283182-46283230)
chr4 (57-121)||(48647732-48647796)
chr4 (232-271)||(14003776-14003815)
chr4 (172-215)||(30036996-30037039)
chr4 (316-374)||(37889582-37889641)
chr4 (317-374)||(16556511-16556569)
chr4 (224-282)||(30035694-30035752)
chr4 (172-218)||(50813809-50813855)
chr4 (172-218)||(55475328-55475374)
chr4 (172-217)||(19670634-19670679)
chr4 (172-213)||(24995029-24995070)
chr4 (231-272)||(26451398-26451439)
chr4 (172-217)||(29547877-29547922)
chr4 (322-374)||(36993101-36993154)
chr4 (172-213)||(42044289-42044330)
chr4 (317-377)||(44251304-44251365)
chr4 (172-217)||(50526089-50526134)
chr4 (254-282)||(7617699-7617727)
chr4 (333-373)||(21200591-21200631)
chr4 (57-121)||(31910222-31910286)
chr4 (172-220)||(41327598-41327646)
chr4 (253-281)||(42973065-42973093)
chr4 (75-119)||(53352574-53352618)
[»] chr1 (57 HSPs)
chr1 (32-121)||(48716288-48716384)
chr1 (34-121)||(38632327-38632421)
chr1 (34-121)||(2581915-2582009)
chr1 (32-113)||(9474890-9474978)
chr1 (56-121)||(27564741-27564806)
chr1 (57-121)||(43162-43226)
chr1 (56-121)||(3000348-3000413)
chr1 (56-121)||(8346394-8346459)
chr1 (56-121)||(38595183-38595248)
chr1 (56-121)||(44548382-44548447)
chr1 (56-121)||(51898689-51898754)
chr1 (317-377)||(2017662-2017722)
chr1 (175-215)||(49811447-49811487)
chr1 (317-374)||(14262698-14262756)
chr1 (172-218)||(32813384-32813430)
chr1 (56-113)||(41758834-41758891)
chr1 (172-213)||(41758942-41758983)
chr1 (33-121)||(47452326-47452421)
chr1 (32-121)||(48489306-48489394)
chr1 (56-120)||(11152385-11152449)
chr1 (57-121)||(13414791-13414855)
chr1 (317-372)||(15417794-15417850)
chr1 (57-121)||(49811533-49811597)
chr1 (322-377)||(50065067-50065123)
chr1 (77-121)||(50630508-50630552)
chr1 (317-374)||(49239824-49239882)
chr1 (172-213)||(9474798-9474839)
chr1 (327-387)||(12148560-12148621)
chr1 (172-213)||(27564657-27564698)
chr1 (56-121)||(32813276-32813341)
chr1 (56-121)||(37649227-37649292)
chr1 (172-213)||(37649335-37649376)
chr1 (172-217)||(45044478-45044523)
chr1 (172-213)||(48716204-48716245)
chr1 (327-374)||(24134611-24134659)
chr1 (172-220)||(51898598-51898646)
chr1 (172-219)||(6261007-6261054)
chr1 (327-373)||(25031484-25031531)
chr1 (222-277)||(26533957-26534012)
chr1 (56-106)||(26274461-26274511)
chr1 (175-213)||(26274569-26274607)
chr1 (177-219)||(44454125-44454167)
chr1 (328-370)||(47651936-47651978)
chr1 (317-374)||(49620032-49620090)
chr1 (172-206)||(50630595-50630629)
chr1 (172-213)||(2582052-2582093)
chr1 (222-290)||(7615853-7615919)
chr1 (317-369)||(10123030-10123083)
chr1 (172-217)||(11152296-11152341)
chr1 (172-217)||(26440861-26440906)
chr1 (232-281)||(37949979-37950028)
chr1 (317-373)||(40061504-40061561)
chr1 (317-369)||(47428872-47428925)
chr1 (327-374)||(3347690-3347738)
chr1 (57-121)||(26440764-26440828)
chr1 (327-374)||(34702300-34702348)
chr1 (223-287)||(45363113-45363176)
[»] chr2 (51 HSPs)
chr2 (31-121)||(4060682-4060779)
chr2 (56-121)||(20700844-20700909)
chr2 (33-121)||(27864703-27864798)
chr2 (33-121)||(28381661-28381756)
chr2 (57-121)||(10249388-10249452)
chr2 (57-121)||(32505654-32505718)
chr2 (32-113)||(40701476-40701564)
chr2 (56-121)||(28863484-28863549)
chr2 (34-121)||(7465741-7465835)
chr2 (34-121)||(9058480-9058574)
chr2 (34-121)||(17473020-17473114)
chr2 (34-121)||(33436106-33436200)
chr2 (172-218)||(20700952-20700998)
chr2 (33-121)||(13438342-13438437)
chr2 (56-113)||(19930834-19930891)
chr2 (172-217)||(40613820-40613865)
chr2 (317-387)||(3330178-3330249)
chr2 (317-363)||(34235855-34235901)
chr2 (172-218)||(36168973-36169019)
chr2 (34-107)||(38882834-38882913)
chr2 (56-121)||(5574494-5574559)
chr2 (172-213)||(10249304-10249345)
chr2 (229-282)||(37913775-37913828)
chr2 (34-121)||(30915463-30915557)
chr2 (172-218)||(3738080-3738126)
chr2 (317-374)||(34107554-34107612)
chr2 (172-217)||(2533260-2533305)
chr2 (172-217)||(3440116-3440161)
chr2 (172-213)||(5574422-5574463)
chr2 (172-213)||(7465657-7465698)
chr2 (172-213)||(17473157-17473198)
chr2 (172-217)||(17823925-17823970)
chr2 (172-213)||(27864828-27864869)
chr2 (172-213)||(28863592-28863633)
chr2 (172-213)||(32505570-32505611)
chr2 (180-217)||(33436346-33436383)
chr2 (56-121)||(40613908-40613973)
chr2 (334-390)||(42678318-42678375)
chr2 (172-220)||(43490258-43490306)
chr2 (172-215)||(41758724-41758767)
chr2 (172-206)||(33436029-33436063)
chr2 (252-282)||(40365263-40365293)
chr2 (174-216)||(44152066-44152108)
chr2 (223-272)||(12697228-12697277)
chr2 (172-213)||(13438480-13438521)
chr2 (172-213)||(19930742-19930783)
chr2 (172-213)||(28381577-28381618)
chr2 (334-370)||(33482636-33482673)
chr2 (235-288)||(37913404-37913457)
chr2 (56-113)||(38273156-38273213)
chr2 (322-373)||(18424134-18424186)
[»] chr3 (60 HSPs)
chr3 (32-121)||(33644198-33644294)
chr3 (33-121)||(53982010-53982105)
chr3 (34-113)||(54868909-54868995)
chr3 (35-121)||(31456690-31456783)
chr3 (56-121)||(17470434-17470499)
chr3 (172-217)||(20764833-20764878)
chr3 (223-272)||(28422960-28423009)
chr3 (172-217)||(30801651-30801696)
chr3 (172-217)||(35965700-35965745)
chr3 (34-106)||(49607414-49607493)
chr3 (56-121)||(52629329-52629394)
chr3 (58-121)||(27714897-27714960)
chr3 (34-103)||(11095377-11095453)
chr3 (179-221)||(11140957-11140999)
chr3 (56-106)||(48587112-48587162)
chr3 (60-121)||(8076426-8076487)
chr3 (172-213)||(11095289-11095330)
chr3 (172-217)||(35536763-35536808)
chr3 (57-106)||(36707445-36707494)
chr3 (317-372)||(30162724-30162779)
chr3 (317-372)||(36590458-36590513)
chr3 (327-385)||(38668177-38668236)
chr3 (172-218)||(8956899-8956945)
chr3 (317-374)||(47864696-47864754)
chr3 (317-374)||(49429520-49429578)
chr3 (222-279)||(7047593-7047650)
chr3 (172-217)||(8076530-8076575)
chr3 (172-217)||(11347840-11347885)
chr3 (172-217)||(14623757-14623802)
chr3 (172-217)||(26141448-26141493)
chr3 (56-121)||(26754724-26754789)
chr3 (230-287)||(29677821-29677877)
chr3 (172-217)||(33118768-33118813)
chr3 (57-106)||(33118872-33118921)
chr3 (172-217)||(41189682-41189727)
chr3 (172-217)||(47532002-47532047)
chr3 (172-213)||(49607551-49607592)
chr3 (333-377)||(50381771-50381816)
chr3 (229-274)||(50520244-50520289)
chr3 (57-121)||(11347928-11347992)
chr3 (182-218)||(11907514-11907550)
chr3 (224-272)||(28041429-28041477)
chr3 (327-374)||(29645814-29645862)
chr3 (327-377)||(985906-985957)
chr3 (172-219)||(35093722-35093769)
chr3 (172-215)||(43746476-43746519)
chr3 (317-374)||(27817045-27817103)
chr3 (317-370)||(33528182-33528236)
chr3 (251-281)||(36198457-36198487)
chr3 (57-106)||(9563029-9563078)
chr3 (333-373)||(11483674-11483715)
chr3 (56-121)||(26141538-26141603)
chr3 (172-217)||(26754832-26754877)
chr3 (172-213)||(33644337-33644378)
chr3 (172-217)||(42823248-42823293)
chr3 (172-213)||(48587023-48587064)
chr3 (172-217)||(51419278-51419323)
chr3 (172-213)||(53982148-53982189)
chr3 (327-374)||(27471564-27471612)
chr3 (327-374)||(39739334-39739382)
[»] chr5 (44 HSPs)
chr5 (33-121)||(40145406-40145501)
chr5 (56-121)||(18520890-18520955)
chr5 (31-106)||(35785196-35785278)
chr5 (34-121)||(36732948-36733042)
chr5 (56-121)||(2740303-2740368)
chr5 (56-121)||(13811681-13811746)
chr5 (172-217)||(31009125-31009170)
chr5 (56-121)||(42414308-42414373)
chr5 (317-372)||(12375384-12375439)
chr5 (317-372)||(15696274-15696329)
chr5 (56-113)||(6679727-6679784)
chr5 (56-121)||(14831843-14831908)
chr5 (172-217)||(15409528-15409573)
chr5 (33-121)||(33149644-33149739)
chr5 (223-290)||(35240468-35240534)
chr5 (325-374)||(43227926-43227976)
chr5 (172-217)||(2177501-2177546)
chr5 (172-213)||(2740411-2740452)
chr5 (172-213)||(16115254-16115295)
chr5 (172-213)||(18520806-18520847)
chr5 (172-217)||(21370141-21370186)
chr5 (56-113)||(28177804-28177861)
chr5 (172-213)||(33149560-33149601)
chr5 (172-213)||(40145544-40145585)
chr5 (172-216)||(6679835-6679879)
chr5 (77-121)||(31009038-31009082)
chr5 (327-374)||(31250207-31250255)
chr5 (172-215)||(9603950-9603993)
chr5 (67-121)||(15409616-15409670)
chr5 (77-119)||(31132394-31132436)
chr5 (56-106)||(35943913-35943963)
chr5 (333-374)||(38503250-38503292)
chr5 (172-217)||(2252086-2252131)
chr5 (172-217)||(3921183-3921228)
chr5 (172-213)||(14831951-14831992)
chr5 (172-217)||(26720653-26720698)
chr5 (172-217)||(26990402-26990447)
chr5 (172-213)||(31132471-31132512)
chr5 (172-205)||(36732872-36732905)
chr5 (81-118)||(41470425-41470462)
chr5 (317-373)||(42208977-42209034)
chr5 (231-271)||(7577523-7577563)
chr5 (172-216)||(33825243-33825287)
chr5 (256-288)||(43514555-43514587)
[»] chr7 (57 HSPs)
chr7 (34-121)||(8080389-8080483)
chr7 (57-121)||(19436193-19436257)
chr7 (32-121)||(38267038-38267134)
chr7 (56-121)||(19329871-19329936)
chr7 (34-113)||(4999528-4999614)
chr7 (34-121)||(7389389-7389483)
chr7 (34-121)||(38837217-38837311)
chr7 (172-218)||(46033718-46033764)
chr7 (56-121)||(3784024-3784089)
chr7 (172-216)||(16374743-16374787)
chr7 (34-121)||(36361919-36362013)
chr7 (172-215)||(39255844-39255887)
chr7 (56-121)||(3434591-3434656)
chr7 (172-217)||(21234538-21234583)
chr7 (56-113)||(35137562-35137619)
chr7 (172-213)||(36361847-36361888)
chr7 (172-213)||(36362151-36362192)
chr7 (172-217)||(41423819-41423864)
chr7 (172-217)||(46374742-46374787)
chr7 (57-121)||(3694397-3694461)
chr7 (172-220)||(12311041-12311089)
chr7 (57-121)||(32951499-32951563)
chr7 (34-121)||(36362026-36362120)
chr7 (317-374)||(38378279-38378337)
chr7 (317-374)||(48433687-48433745)
chr7 (172-213)||(4999436-4999477)
chr7 (172-213)||(8080305-8080346)
chr7 (172-213)||(19329979-19330020)
chr7 (172-213)||(32951415-32951456)
chr7 (172-217)||(35523013-35523058)
chr7 (172-208)||(19436114-19436150)
chr7 (172-220)||(38044334-38044382)
chr7 (317-371)||(4956069-4956124)
chr7 (172-215)||(18207316-18207359)
chr7 (172-219)||(35468771-35468818)
chr7 (68-106)||(16374845-16374883)
chr7 (172-218)||(22343498-22343544)
chr7 (317-374)||(28914854-28914912)
chr7 (317-387)||(32986392-32986462)
chr7 (333-374)||(40273881-40273923)
chr7 (56-106)||(40957736-40957786)
chr7 (172-213)||(3434689-3434730)
chr7 (56-113)||(8238242-8238299)
chr7 (253-282)||(28924882-28924911)
chr7 (172-217)||(31736014-31736059)
chr7 (185-218)||(36208304-36208337)
chr7 (172-213)||(38837354-38837395)
chr7 (172-213)||(40957844-40957885)
chr7 (322-370)||(48619860-48619909)
chr7 (172-216)||(2318160-2318204)
chr7 (254-282)||(6330838-6330866)
chr7 (327-374)||(23824579-23824627)
chr7 (172-220)||(26296781-26296829)
chr7 (327-374)||(31793528-31793576)
chr7 (172-216)||(32045974-32046018)
chr7 (334-373)||(37563245-37563285)
chr7 (327-370)||(43440753-43440797)
[»] chr6 (36 HSPs)
chr6 (33-121)||(17598553-17598648)
chr6 (56-121)||(32869707-32869772)
chr6 (172-218)||(22421996-22422042)
chr6 (172-218)||(31976385-31976431)
chr6 (56-121)||(22880664-22880729)
chr6 (56-121)||(29857856-29857921)
chr6 (56-113)||(31109414-31109471)
chr6 (317-372)||(15716985-15717040)
chr6 (56-121)||(11427647-11427712)
chr6 (172-213)||(11427755-11427796)
chr6 (222-282)||(6712408-6712468)
chr6 (235-282)||(6712864-6712911)
chr6 (317-374)||(6228237-6228295)
chr6 (317-374)||(18903344-18903402)
chr6 (317-373)||(17217019-17217076)
chr6 (335-372)||(19748161-19748198)
chr6 (222-283)||(26050733-26050794)
chr6 (222-283)||(26071902-26071963)
chr6 (172-217)||(31952948-31952993)
chr6 (34-113)||(6209479-6209565)
chr6 (172-220)||(15989957-15990005)
chr6 (327-374)||(20415549-20415597)
chr6 (58-106)||(23128148-23128196)
chr6 (327-374)||(24794882-24794930)
chr6 (224-283)||(25549714-25549774)
chr6 (172-219)||(4231685-4231732)
chr6 (317-367)||(9763502-9763552)
chr6 (58-103)||(946407-946452)
chr6 (333-370)||(1194697-1194734)
chr6 (322-374)||(7954904-7954957)
chr6 (172-213)||(29857964-29858005)
chr6 (172-217)||(30341278-30341323)
chr6 (172-217)||(31110679-31110724)
chr6 (172-213)||(32869815-32869856)
chr6 (222-282)||(7683923-7683982)
chr6 (172-220)||(30870151-30870198)
[»] scaffold0237 (2 HSPs)
scaffold0237 (56-121)||(4058-4123)
scaffold0237 (172-213)||(4166-4207)
[»] scaffold0110 (2 HSPs)
scaffold0110 (172-217)||(8781-8826)
scaffold0110 (57-107)||(8883-8933)
[»] scaffold0321 (1 HSPs)
scaffold0321 (56-107)||(10129-10180)
[»] scaffold0018 (2 HSPs)
scaffold0018 (317-372)||(121771-121826)
scaffold0018 (172-216)||(152635-152679)
[»] scaffold0001 (1 HSPs)
scaffold0001 (317-374)||(419772-419830)
[»] scaffold1268 (2 HSPs)
scaffold1268 (56-121)||(935-1000)
scaffold1268 (172-216)||(848-892)
[»] scaffold1267 (2 HSPs)
scaffold1267 (56-121)||(935-1000)
scaffold1267 (172-216)||(848-892)
[»] scaffold0316 (1 HSPs)
scaffold0316 (172-217)||(17240-17285)


Alignment Details
Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 23122698 - 23122603
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||    
T  23122698 tgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 504222 - 504127
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  504222 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 40424045 - 40423949
Alignment:
Q  32 ttgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||| ||||       |||||||||| ||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||    
T  40424045 ttgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 14547951 - 14548016
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  14547951 gcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 15197362 - 15197427
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  15197362 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 12831077 - 12831141
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  12831077 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 37038508 - 37038573
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||  ||||| |||||||    
T  37038508 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 1180040 - 1179946
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       | |||||||| ||||||| | |||||||||||||||||||||||| ||||| |||||| |||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 5957967 - 5958011
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  5957967 tgtacaagggtgtatgagaataaagggtgtttatgtaacattttc 5958011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 9271126 - 9271186
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||| | |||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  9271126 tttttatatggactaaaacttgaaatttaaaaattttatatggatcaaaaacatatttaac 9271186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 13906598 - 13906653
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  13906598 tcaaatagcctagtggctagagaaattcaccttaaaatgaataagtgaggtgtccg 13906653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 4854826 - 4854780
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  4854826 tgtacaagggtatatgagaataaagagtgtctatgtaacattttcca 4854780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 5904351 - 5904409
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||||||| ||||||||    
T  5904351 tcaaatagcttagtagctagagaaattcatcttaaagatgaataagtgggatgtccggg 5904409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 5957859 - 5957909
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  5957859 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtgga 5957909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 8841395 - 8841349
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  8841395 tgtacaagagtgtatgagaataaatggtgtctatgtaacattttcca 8841349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 504084 - 504043
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  504084 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 504043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 8841499 - 8841438
Alignment:
Q  60 tacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||| ||||||| | |||||||||||| |||||||||||||||||| ||||| |||||||    
T  8841499 tacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 23122560 - 23122519
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  23122560 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 23122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 34012397 - 34012302
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       | |||||||| ||||||| | |||||||||| |||||||||||||||||||  ||||| |||||||    
T  34012397 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 42354551 - 42354506
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  42354551 tgtagaagggtgtatgagaataaatggtgtctatgtaacattttcc 42354506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 43414544 - 43414499
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||    
T  43414544 tgtacaagggtgtatggcaataaagggtgtctatgtaacattttcc 43414499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 10284701 - 10284637
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||  ||||||| | |||||||||| |||||||||||||||||||| ||||| |||||||    
T  10284701 caatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 31829354 - 31829304
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaa 272  Q
    |||||| |||||||||||||| |||||| ||||||||| ||||||||||||    
T  31829354 tttttatagggactaaaacttgaaatttgaaaattttacagggatcaaaaa 31829304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 1360112 - 1360169
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccggg 374  Q
    |||| |||| |||||  ||||||||||||  |||||||||||||||||||||||||||    
T  1360112 tcaagtagcctagtggttagagaaattcactttaaaatgaataagtggggtgtccggg 1360169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 10284594 - 10284549
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||    
T  10284594 tgtacaaggttgtataagaataaaaggtgtctatgtaacattttcc 10284549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 12831184 - 12831225
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  12831184 tgtacaagggtgtatgagaataaatggtgtctatgtatcatt 12831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 15048144 - 15048099
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||    
T  15048144 tgtacaagggtgtatcggaataaagggtgtctatataacattttcc 15048099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 15048252 - 15048188
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||| ||| ||||| ||||| |||||||    
T  15048252 gcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 32985844 - 32985791
Alignment:
Q  229 agggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||||||||||| |||||| ||||||||||||| | |||||| |||||||||    
T  32985844 agggactaaaacttgaaatttgaaaattttataggaaccaaaaacatatttaac 32985791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 34012259 - 34012218
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  34012259 tgtacaagggtgtacgagaataaagggtgtctatgtatcatt 34012218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 38289212 - 38289265
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgt 369  Q
    |||| |||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  38289212 tcaagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgt 38289265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 32707966 - 32707918
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||||    
T  32707966 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttccaaa 32707918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 37038616 - 37038664
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    |||||||||||||||   |||||||||||| ||||||||||||||||||    
T  37038616 tgtacaagggtgtatagaaataaagggtgtttatgtaacattttccaaa 37038664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 387
Target Start/End: Complemental strand, 10310368 - 10310329
Alignment:
Q  348 ttaaaatgaataagtggggtgtccgggatttaaactccga 387  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  10310368 ttaaagtgaataagtggggtgtccgggattcaaactccga 10310329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 284
Target Start/End: Original strand, 28702034 - 28702065
Alignment:
Q  253 aattttatagggatcaaaaatatatttaacac 284  Q
    ||||||||||||||||||||||||||||||||    
T  28702034 aattttatagggatcaaaaatatatttaacac 28702065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 32032861 - 32032908
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaa 219  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  32032861 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttccaa 32032908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 32986689 - 32986638
Alignment:
Q  231 ggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||||||||  ||||||||||| |||||||||| |||||| |||||||||    
T  32986689 ggactaaaactagaaatttaaaaaatttatagggaccaaaaacatatttaac 32986638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 43456648 - 43456687
Alignment:
Q  335 agagaaattcatcttaaaatgaataagtggggtgtccggg 374  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  43456648 agagaaaatcaccttaaaatgaataagtggggtgtccggg 43456687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 4259977 - 4259919
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| |||||||||||||| |||||||    
T  4259977 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggagtccggg 4259919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 22652801 - 22652743
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatc-ttaaaatgaataagtggggtgtccggg 374  Q
    |||| |||||||||| ||||||||||||| | |||| |||||||| |||||||||||||    
T  22652801 tcaagtagcttagtggctagagaaattcacctttaacatgaataattggggtgtccggg 22652743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 40423906 - 40423864
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattt 214  Q
    |||||||||||||||| ||||||| |||||||||||| |||||    
T  40423906 tgtacaagggtgtatgggaataaaaggtgtctatgtatcattt 40423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 107
Target Start/End: Complemental strand, 44507137 - 44507107
Alignment:
Q  77 acacaaaaatctgacacgtagtcacgtggac 107  Q
    |||||||||||||||||||||||||||||||    
T  44507137 acacaaaaatctgacacgtagtcacgtggac 44507107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 368
Target Start/End: Complemental strand, 10162077 - 10162036
Alignment:
Q  327 tagtgtctagagaaattcatcttaaaatgaataagtggggtg 368  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||    
T  10162077 tagtggctagagaaattcaccttaaaatgaataagtgaggtg 10162036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 14548059 - 14548100
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||| |||||| |||||||||||||||||||| ||||    
T  14548059 tgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14548100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 15258892 - 15258847
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||  |||||||  ||||||||||||||||||||||||||||    
T  15258892 tgtacaaaagtgtatggaaataaagggtgtctatgtaacattttcc 15258847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 20074907 - 20074870
Alignment:
Q  180 ggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  20074907 ggtgtatgagaataaaatgtgtctatgtaacattttcc 20074870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 42710257 - 42710216
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| ||||||||||||||| |||| ||||    
T  42710257 tgtacaagggtgtatgggaataaagggtgtctgtgtatcatt 42710216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 43413863 - 43413916
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgt 369  Q
    |||| |||| ||||| ||||||||||||| |||||| |||||||||||||||||    
T  43413863 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgt 43413916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 9122235 - 9122279
Alignment:
Q  77 acacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||| |||||||||||||  ||||| |||||||    
T  9122235 acacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 16056364 - 16056316
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||||||||||||  | |||| |||||||||||||||||| |||||    
T  16056364 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacatttcccaaa 16056316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 45536826 - 45536778
Alignment:
Q  327 tagtgtctagagaaattca-tcttaaaatgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| | |||| ||||||||||||||||||||||    
T  45536826 tagtggctagagaaattcactattaagatgaataagtggggtgtccggg 45536778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 41236347 - 41236441
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 48183149 - 48183055
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 11511564 - 11511468
Alignment:
Q  32 ttgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||       |||||||||| ||||||| | ||| ||||||||||||||||||||||||||| ||||| |||||||    
T  11511564 ttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 50052499 - 50052434
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  50052499 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 29234345 - 29234251
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||| | || |||||||||||||||||||||||||||||| ||||| |||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 29239886 - 29239980
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||||| |||||||||||| |||||||||||||||||| || || |||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 39669664 - 39669613
Alignment:
Q  231 ggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  39669664 ggactaaatcttaaaatttaaaaattttatagggatcaaaaacatatttaac 39669613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 6034042 - 6034138
Alignment:
Q  32 ttgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||       |||||||||| ||||||| | |||||||||||||||| |||||||||||||  ||||| |||||||    
T  6034042 ttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 54473635 - 54473539
Alignment:
Q  32 ttgagtaatgatacatagacacccg-------caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||        ||||||||| ||||||| | |||||||||||| |||||||||||||||||| ||||| |||||||    
T  54473635 ttgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 480517 - 480453
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||| | |||||||    
T  480517 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 23608265 - 23608329
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||| ||||| || |||||||    
T  23608265 caatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 50526242 - 50526178
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcac 120  Q
    |||||||||| ||||||| | ||||||||||||||||||| |||||||||| |||||| ||||||    
T  50526242 gcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 217
Target Start/End: Original strand, 3481787 - 3481826
Alignment:
Q  178 agggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3481787 agggtgtatgagaataaagggtgtctatgtaacattttcc 3481826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 41824019 - 41824065
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  41824019 tgtacaaaggtgtatgagaataaatggtgtctatgtaacattttcca 41824065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 24995178 - 24995113
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||| |||||| |||||||||||||||||||| ||||| |||||||    
T  24995178 gcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 29240023 - 29240068
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||    
T  29240023 tgtacaagagtgtatgggaataaagggtgtctatgtaacattttcc 29240068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 48183012 - 48182971
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  48183012 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 48182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 50052391 - 50052346
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  50052391 tgtacaaaggtgtatgggaataaagggtgtctatgtaacattttcc 50052346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 13793585 - 13793525
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||| |||||| ||||||| |||||| |||||||||| ||||||||||| |||||||||    
T  13793585 tttttatagggaccaaaacttgaaatttgaaaattttattgggatcaaaaacatatttaac 13793525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 13793966 - 13794026
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||| ||| |||||||||| |||||| ||||| ||||||||| ||||||||||||||||    
T  13793966 tttttataggaactaaaacttgaaatttgaaaatattatagggaccaaaaatatatttaac 13794026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 42044417 - 42044373
Alignment:
Q  77 acacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||    
T  42044417 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 287
Target Start/End: Complemental strand, 51956403 - 51956347
Alignment:
Q  231 ggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaacacttt 287  Q
    ||||||||| || ||||||||| ||||||||||||||||||| ||||||||| ||||    
T  51956403 ggactaaaatttgaaatttaaagattttatagggatcaaaaacatatttaacccttt 51956347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 13210136 - 13210191
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    |||||| || ||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  13210136 tcaaattgcgtagtggctagagaaattcaccttaaaatgaataagtgaggtgtccg 13210191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 40574916 - 40574959
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatttt 215  Q
    |||||||||||||||||||||||| ||||||||| |||||||||    
T  40574916 tgtacaagggtgtatgagaataaaaggtgtctatctaacatttt 40574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 11491196 - 11491254
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  11491196 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 11491254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 3481683 - 3481748
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||  ||||||| | ||||||||||||||||| ||||||||||||| || || |||||||    
T  3481683 gcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 5127325 - 5127378
Alignment:
Q  229 agggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    ||||| |||||||||||||||| ||||||||||| || |||||| |||||||||    
T  5127325 agggattaaaacttaaaatttagaaattttatagagaccaaaaacatatttaac 5127378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 6034181 - 6034222
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  6034181 tgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 6034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 31910329 - 31910374
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||||    
T  31910329 tgtacaagagtgtatgggaataaatggtgtctatgtaacattttcc 31910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 41236484 - 41236525
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  41236484 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 41236525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 53352537 - 53352496
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  53352537 tgtacaagggtgtatgaaaataaagggtgtctatgtatcatt 53352496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 22525489 - 22525445
Alignment:
Q  334 tagagaaattcatcttaaaa-tgaataagtggggtgtccgggatt 377  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  22525489 tagagaaattcatcttaaaggtgaataagtggggtgtccgggatt 22525445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 40406947 - 40406995
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  40406947 tagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 40406995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 41823932 - 41823976
Alignment:
Q  77 acacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||    
T  41823932 acacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 46283230 - 46283182
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  46283230 tagtgactagagaaattcaccttaaagatgaataagtggggtgtccggg 46283182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 48647796 - 48647732
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| || ||| | ||| |||||||| |||||| ||||||||||||||||| |||||||    
T  48647796 caatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 271
Target Start/End: Original strand, 14003776 - 14003815
Alignment:
Q  232 gactaaaacttaaaatttaaaaattttatagggatcaaaa 271  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  14003776 gactaaaacttaaaatctaaaaattttatagggaccaaaa 14003815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 30036996 - 30037039
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatttt 215  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||    
T  30036996 tgtacaaggatgtatgaaaataaagggtgtctatgtaatatttt 30037039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 374
Target Start/End: Original strand, 37889582 - 37889641
Alignment:
Q  316 atcaaatagcttagtgtctagagaaattcatcttaaaa-tgaataagtggggtgtccggg 374  Q
    ||||| |||| ||||| ||||||||||||| ||||||| |||||||||| ||||||||||    
T  37889582 atcaagtagcctagtggctagagaaattcaccttaaaagtgaataagtgaggtgtccggg 37889641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 16556569 - 16556511
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||| ||||    
T  16556569 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgttcggg 16556511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 282
Target Start/End: Complemental strand, 30035752 - 30035694
Alignment:
Q  224 tttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||| ||||| ||| ||||||||||||||||||||| ||| ||||||  ||||||||    
T  30035752 tttagaaggacttaaagttaaaatttaaaaattttataaggaccaaaaacttatttaac 30035694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 50813855 - 50813809
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||    
T  50813855 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcca 50813809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 55475328 - 55475374
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||    
T  55475328 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcca 55475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 19670679 - 19670634
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||    
T  19670679 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 19670634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 24995070 - 24995029
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||| |||||||| |||||||||||||||||||| ||||    
T  24995070 tgtacaatggtgtatgggaataaagggtgtctatgtatcatt 24995029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 26451398 - 26451439
Alignment:
Q  231 ggactaaaacttaaaatttaaaaattttatagggatcaaaaa 272  Q
    ||||||||||||||||||| ||||||||||||| || |||||    
T  26451398 ggactaaaacttaaaatttgaaaattttataggaataaaaaa 26451439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 29547922 - 29547877
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||    
T  29547922 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 29547877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 374
Target Start/End: Complemental strand, 36993154 - 36993101
Alignment:
Q  322 tagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| ||||| ||||||||||||| |||||| |||||||| |||||||||||||    
T  36993154 tagcctagtggctagagaaattcaccttaaagatgaataattggggtgtccggg 36993101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 42044330 - 42044289
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||  ||||||||||||||||||| ||||    
T  42044330 tgtacaagggtgtatggaaataaagggtgtctatgtatcatt 42044289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 44251304 - 44251365
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgggatt 377  Q
    ||||||||| ||| | ||||| ||||||| |||||| |||||||| ||||||||||||||||    
T  44251304 tcaaatagcctagcggctagaaaaattcaccttaaagatgaataaatggggtgtccgggatt 44251365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 50526134 - 50526089
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||   |||||||||||| |||||||||||||||    
T  50526134 tgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 50526089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 282
Target Start/End: Original strand, 7617699 - 7617727
Alignment:
Q  254 attttatagggatcaaaaatatatttaac 282  Q
    |||||||||||||||||||||||||||||    
T  7617699 attttatagggatcaaaaatatatttaac 7617727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 21200631 - 21200591
Alignment:
Q  333 ctagagaaattcatcttaaaatgaataagtggggtgtccgg 373  Q
    ||||||||||||| |||||| ||||||||||||||| ||||    
T  21200631 ctagagaaattcaccttaaagtgaataagtggggtgaccgg 21200591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 31910222 - 31910286
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||  ||||||| | ||||||||||||||||| ||| ||| ||||| ||||| |||||||    
T  31910222 caatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 41327598 - 41327646
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||| || || || ||||||||||||||||||||||||||| ||||    
T  41327598 tgtacaatggggtgtgtgaataaagggtgtctatgtaacatttttcaaa 41327646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 281
Target Start/End: Original strand, 42973065 - 42973093
Alignment:
Q  253 aattttatagggatcaaaaatatatttaa 281  Q
    |||||||||||||||||||||||||||||    
T  42973065 aattttatagggatcaaaaatatatttaa 42973093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 53352618 - 53352574
Alignment:
Q  75 ctacacaaaaatctgacacgtagtcacgtggactccgcataagca 119  Q
    |||||||||||||||||||||||| | |||||| ||||| |||||    
T  53352618 ctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 48716384 - 48716288
Alignment:
Q  32 ttgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||       |||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||    
T  48716384 ttgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 38632421 - 38632327
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 2581915 - 2582009
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 9474978 - 9474890
Alignment:
Q  32 ttgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    ||||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||    
T  9474978 ttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgca 9474890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 27564806 - 27564741
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||| |||||||    
T  27564806 gcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 43162 - 43226
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||| | ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||    
T  43162 caatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 3000348 - 3000413
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||| | |||||||    
T  3000348 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 8346459 - 8346394
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| | ||| |||||||    
T  8346459 gcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 38595183 - 38595248
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||| | |||||||    
T  38595183 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 44548447 - 44548382
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||| | | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  44548447 gcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 51898754 - 51898689
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||  ||||| |||||||    
T  51898754 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 2017662 - 2017722
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccgggatt 377  Q
    |||| ||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||    
T  2017662 tcaagtagtttagtggctagagaaattcaccttaaaatgaacaagtggggtgtccgggatt 2017722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 49811487 - 49811447
Alignment:
Q  175 acaagggtgtatgagaataaagggtgtctatgtaacatttt 215  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49811487 acaagggtgtatgagaataaagggtgtctatgtaacatttt 49811447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 14262698 - 14262756
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||| |||||||||||    
T  14262698 tcaaatagcttagtggctagagaaattcaccttaaagatgaataagtagggtgtccggg 14262756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 32813384 - 32813430
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  32813384 tgtacaagggtgtatgggaataaatggtgtctatgtaacattttcca 32813430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 41758834 - 41758891
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||| ||||| |||||    
T  41758834 gcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgca 41758891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 41758942 - 41758983
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  41758942 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 41758983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 47452421 - 47452326
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       | |||||||| ||||||| | |||||||||||| |||||||||||||||||  ||||| |||||||    
T  47452421 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 48489306 - 48489394
Alignment:
Q  32 ttgagtaatgatacatagacacccgcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||| |||||||||||||||  |||||||||| |  |||||| |||||||||||||||| || ||||||||||  ||||| |||||||    
T  48489306 ttgagttatgatacatagacactggcaatacaccctg-gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 11152449 - 11152385
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcac 120  Q
    |||||||||| || |||||| |||||||||||||||||||||||| || ||| ||||| ||||||    
T  11152449 gcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 13414791 - 13414855
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||| ||||||| | |||||||||||| |||||||||||||||||| || || |||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 15417794 - 15417850
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccg 372  Q
    |||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  15417794 tcaagtagcctagtgactagagaaattcatcttaaagatgaataagtggggtgtccg 15417850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 49811597 - 49811533
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||  | ||||||||| |||||||    
T  49811597 caatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 377
Target Start/End: Complemental strand, 50065123 - 50065067
Alignment:
Q  322 tagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgggatt 377  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||    
T  50065123 tagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtccgagatt 50065067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 50630508 - 50630552
Alignment:
Q  77 acacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||    
T  50630508 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 49239824 - 49239882
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||||||||| ||||||||||| | |||||| ||||||||||||||||||||||    
T  49239824 tcaagtagcttagtggctagagaaatttaccttaaagatgaataagtggggtgtccggg 49239882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 9474839 - 9474798
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  9474839 tgtacaagggtgtatgagaataaagagtgtctatgtatcatt 9474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 12148560 - 12148621
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgggatttaaactccga 387  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||| ||| ||| ||||||||    
T  12148560 tagtgtccagagaaattcaccttaaagatgaataagtggggtgtctggggtttgaactccga 12148621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 27564698 - 27564657
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  27564698 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 27564657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 32813276 - 32813341
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||| ||| | ||||||||||||||||||| ||||| ||||| ||||| |||||||    
T  32813276 gcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 37649227 - 37649292
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||  ||||||| | ||||||||||||||||||| |||||||| | |||||| |||||||    
T  37649227 gcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 37649335 - 37649376
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  37649335 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 37649376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 45044523 - 45044478
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||    
T  45044523 tgtacaagggtgtatgagaataaatgatgtctacgtaacattttcc 45044478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 48716245 - 48716204
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  48716245 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 48716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 24134611 - 24134659
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  24134611 tagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 24134659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 51898646 - 51898598
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    |||||||||||||||   |||||||||||| ||||||||||||||||||    
T  51898646 tgtacaagggtgtatagaaataaagggtgtttatgtaacattttccaaa 51898598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 6261007 - 6261054
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaa 219  Q
    ||||||| ||||||||| |||||| ||||| |||||||||||||||||    
T  6261007 tgtacaaaggtgtatgaaaataaatggtgtgtatgtaacattttccaa 6261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 373
Target Start/End: Original strand, 25031484 - 25031531
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgg 373  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  25031484 tagtggctagagaaattcaccttaaagatgaataagtggggtgtccgg 25031531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 26534012 - 26533957
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatat 277  Q
    |||||| | ||| |||||||| ||||||||||||||||||||||| ||||| ||||    
T  26534012 tttttataaggattaaaacttgaaatttaaaaattttatagggataaaaaacatat 26533957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 26274461 - 26274511
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    |||||||| | ||||||||| ||| ||||||||||||| ||||||||||||    
T  26274461 gcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtgga 26274511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 26274569 - 26274607
Alignment:
Q  175 acaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  26274569 acaagggtgtatgggaataaagggtgtctatgtatcatt 26274607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 44454125 - 44454167
Alignment:
Q  177 aagggtgtatgagaataaagggtgtctatgtaacattttccaa 219  Q
    |||||||||| |||||||| ||||| |||||||||||||||||    
T  44454125 aagggtgtataagaataaatggtgtttatgtaacattttccaa 44454167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 370
Target Start/End: Complemental strand, 47651978 - 47651936
Alignment:
Q  328 agtgtctagagaaattcatcttaaaatgaataagtggggtgtc 370  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||    
T  47651978 agtggctagagaaattcaccttaaaatgaataagtgggatgtc 47651936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 49620090 - 49620032
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| |||||||||||||  ||||| ||||||||||||||||||||||    
T  49620090 tcaagtagcctagtggctagagaaattcactttaaagatgaataagtggggtgtccggg 49620032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 50630595 - 50630629
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatg 206  Q
    |||||||||||||||||||||||| ||||||||||    
T  50630595 tgtacaagggtgtatgagaataaatggtgtctatg 50630629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 2582052 - 2582093
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||| |||||||||||||| |||||| ||||    
T  2582052 tgtacaagggtgtattagaataaagggtgtttatgtatcatt 2582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 7615853 - 7615919
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaacactttatt 290  Q
    |||||| ||||||||||||  ||||||| | |  | ||||||||||||||||||||||||| |||||||    
T  7615853 tttttatagggactaaaac--aaaatttgatatatctatagggatcaaaaatatatttaaccctttatt 7615919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 10123030 - 10123083
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgt 369  Q
    |||| |||| ||||| ||||||||||||| |||||| |||||||||||||||||    
T  10123030 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgt 10123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 11152341 - 11152296
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||| |||| |||||||||||||| ||||||||| |||||||||||    
T  11152341 tgtagaaggatgtatgagaataaatggtgtctatataacattttcc 11152296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 26440861 - 26440906
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||  ||||||||| ||| |||||||||||||||    
T  26440861 tgtacaagggtgtataggaataaaggatgtttatgtaacattttcc 26440906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 37949979 - 37950028
Alignment:
Q  232 gactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaa 281  Q
    ||||||||||| |||||||||||| ||||||| | |||||| ||||||||    
T  37949979 gactaaaacttgaaatttaaaaatattataggaaccaaaaacatatttaa 37950028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 40061561 - 40061504
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgg 373  Q
    |||| |||| ||||| |||||||||| || |||||| |||||||||||||||||||||    
T  40061561 tcaagtagcctagtggctagagaaatccaccttaaagatgaataagtggggtgtccgg 40061504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 369
Target Start/End: Original strand, 47428872 - 47428925
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgt 369  Q
    ||||||||||||||| ||| |||||||||  ||||| |||||||||||||||||    
T  47428872 tcaaatagcttagtggctaaagaaattcactttaaagatgaataagtggggtgt 47428925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 3347690 - 3347738
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||| ||||    
T  3347690 tagtgactagagaaattcaccttaaagatgaataagtggggtgtacggg 3347738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 26440764 - 26440828
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||| ||| ||| | ||||||||||||||||||| | ||| ||||  |||||||||||||    
T  26440764 caatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcaca 26440828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 34702300 - 34702348
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||| |||||||||||||||| ||||||||||| ||||||||||    
T  34702300 tagtggctaaagaaattcatcttaaagatgaataagtgaggtgtccggg 34702348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 45363176 - 45363113
Alignment:
Q  223 ttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaacacttt 287  Q
    ||||||||||||||||||  |||||| | | |||| ||||||| |||||||||||||||| ||||    
T  45363176 ttttagagggactaaaacgaaaaattgacatattt-atagggaccaaaaatatatttaacccttt 45363113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 4060682 - 4060779
Alignment:
Q  31 attgagtaatgatacatagacacccg-------caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||||| |||||||  |||||||||||||    
T  4060682 attgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 20700844 - 20700909
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  20700844 gcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 27864703 - 27864798
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       |||||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||| |||||||    
T  27864703 tgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 28381756 - 28381661
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       ||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||| |||||||    
T  28381756 tgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 10249452 - 10249388
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  10249452 caatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 32505718 - 32505654
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  32505718 caatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 40701476 - 40701564
Alignment:
Q  32 ttgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    ||||||||||||||||||||||||       |||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||    
T  40701476 ttgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgca 40701564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 28863484 - 28863549
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  28863484 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 7465835 - 7465741
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||||||||||||| || || |||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 9058480 - 9058574
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 17473020 - 17473114
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||||||||||||  ||||| |||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 33436200 - 33436106
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | |||||||||||| |||||||||||||||||| ||||| |||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 20700952 - 20700998
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  20700952 tgtacaagggtgtatgggaataaagggtgtctatgtaacattttcca 20700998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 13438342 - 13438437
Alignment:
Q  33 tgagtaatgatacatagacacccg-------caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||        ||||||| | ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  13438342 tgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 19930891 - 19930834
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||||    
T  19930891 gcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgca 19930834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 40613865 - 40613820
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  40613865 tgtacaagggtgtatgggaataaagggtgtctatgtaacattttcc 40613820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 3330178 - 3330249
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgggatttaaactccga 387  Q
    |||||||||||||||  |||||||||||| |||||| |||||||||||||||||||||| ||  ||||||||    
T  3330178 tcaaatagcttagtggttagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccga 3330249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 34235901 - 34235855
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtg 363  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||    
T  34235901 tcaaatagtttagtgactagagaaattcatcttaaaatgaataagtg 34235855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 36168973 - 36169019
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  36168973 tgtacaagagtgtatgagaataaagggtgtttatgtaacattttcca 36169019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 38882913 - 38882834
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggac 107  Q
    ||||||||||||||||||||||       |||||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggac 38882834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 5574559 - 5574494
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||| ||||||||||||||||||||||||||  ||||| |||||||    
T  5574559 gcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 10249345 - 10249304
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  10249345 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 10249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 37913775 - 37913828
Alignment:
Q  229 agggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    ||||||||||||||||||||||||||||||||||| |  |||| ||||||||||    
T  37913775 agggactaaaacttaaaatttaaaaattttataggaacaaaaactatatttaac 37913828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 30915463 - 30915557
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||  | ||| ||||||||||||||||||||||||||| ||| | |||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 3738080 - 3738126
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||||    
T  3738080 tgtacaaaggtgtatgaaaatatagggtgtctatgtaacattttcca 3738126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 34107612 - 34107554
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  34107612 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 34107554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 2533260 - 2533305
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||    
T  2533260 tgtacaagggtgtatgggaataaagggtgtatatataacattttcc 2533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 3440116 - 3440161
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  3440116 tgtacaaaggtgtatggaaataaagggtgtctatgtaacattttcc 3440161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 5574463 - 5574422
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  5574463 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 5574422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 7465698 - 7465657
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  7465698 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 7465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 17473157 - 17473198
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  17473157 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 17473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 17823925 - 17823970
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||    
T  17823925 tgtacaagggtgtatgtaaataaaggatgtctatgtaacattttcc 17823970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 27864828 - 27864869
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  27864828 tgtacaagggtgtatgagaataaagggtgtcaatgtatcatt 27864869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 28863592 - 28863633
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  28863592 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 28863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 32505611 - 32505570
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  32505611 tgtacaagggtgtatgagaataaagagtgtctatgtatcatt 32505570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 33436346 - 33436383
Alignment:
Q  180 ggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||| |||||||||||||||||||||    
T  33436346 ggtgtatgagaataaaaggtgtctatgtaacattttcc 33436383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 40613973 - 40613908
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||| | ||| ||||| ||||| |||||||    
T  40613973 gcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 42678318 - 42678375
Alignment:
Q  334 tagagaaattcatcttaaa-atgaataagtggggtgtccgggatttaaactccgatcc 390  Q
    |||||||||||| |||||| |||||||||||||||||||||| ||  |||||||||||    
T  42678318 tagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccgatcc 42678375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 43490258 - 43490306
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||||    
T  43490258 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttccaaa 43490306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 41758724 - 41758767
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatttt 215  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||    
T  41758724 tgtacaaggatgtatgagaataaaatgtgtctatgtaacatttt 41758767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 33436063 - 33436029
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatg 206  Q
    |||||||||||||||||||||||| ||||||||||    
T  33436063 tgtacaagggtgtatgagaataaaaggtgtctatg 33436029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 282
Target Start/End: Original strand, 40365263 - 40365293
Alignment:
Q  252 aaattttatagggatcaaaaatatatttaac 282  Q
    |||||||||||||||||||||||||||||||    
T  40365263 aaattttatagggatcaaaaatatatttaac 40365293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 44152066 - 44152108
Alignment:
Q  174 tacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||    
T  44152066 tacaagggtgtatgcgaataaaaggtgtttatgtaacattttc 44152108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 12697277 - 12697228
Alignment:
Q  223 ttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaa 272  Q
    |||||||||||||||||  |||||||| ||||||||||||| || |||||    
T  12697277 ttttagagggactaaaaaataaaatttgaaaattttataggaatgaaaaa 12697228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 13438480 - 13438521
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||| |||||| |||||||||||||||||||| ||||    
T  13438480 tgtacaaggatgtatgggaataaagggtgtctatgtatcatt 13438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 19930783 - 19930742
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| ||||||| |||||||||||| ||||    
T  19930783 tgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 19930742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 28381618 - 28381577
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||| |||||| |||||||||||||||||||| ||||    
T  28381618 tgtacaaggatgtatgggaataaagggtgtctatgtatcatt 28381577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 33482636 - 33482673
Alignment:
Q  334 tagagaaattcatcttaaa-atgaataagtggggtgtc 370  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  33482636 tagagaaattcatcttaaagatgaataagtggggtgtc 33482673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 37913457 - 37913404
Alignment:
Q  235 taaaacttaaaatttaaaaattttatagggatcaaaaatatatttaacacttta 288  Q
    ||||| ||||||||||||||||||||| |||  ||||| ||||||||| |||||    
T  37913457 taaaatttaaaatttaaaaattttataaggacaaaaaacatatttaactcttta 37913404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 38273213 - 38273156
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    |||||||||| ||| ||| | ||||||||||||||||||||| ||| ||||| |||||    
T  38273213 gcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgca 38273156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 18424134 - 18424186
Alignment:
Q  322 tagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgg 373  Q
    |||| ||||| ||||||||||||| |||||| ||||||||||||| |||||||    
T  18424134 tagcctagtggctagagaaattcaccttaaagatgaataagtgggatgtccgg 18424186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 33644198 - 33644294
Alignment:
Q  32 ttgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  33644198 ttgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 53982010 - 53982105
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  53982010 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 54868995 - 54868909
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    ||||||||||||||||||||||       |||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgca 54868909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 31456690 - 31456783
Alignment:
Q  35 agtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||       |||||||||| ||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 17470434 - 17470499
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||| || || |||||||    
T  17470434 gcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 20764878 - 20764833
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  20764878 tgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 20764833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 28422960 - 28423009
Alignment:
Q  223 ttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaa 272  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  28422960 ttttagagggactaaaacttaaaatttgaaaattttatagggataaaaaa 28423009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 30801696 - 30801651
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  30801696 tgtacaagggtgtatgagaataaaaggtgtctatgtaacattttcc 30801651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 35965745 - 35965700
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  35965745 tgtacaagggtgtatgagaataaaaggtgtctatgtaacattttcc 35965700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 49607414 - 49607493
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtgga 49607493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 52629329 - 52629394
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||| | |||||||    
T  52629329 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 27714960 - 27714897
Alignment:
Q  58 aatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||| ||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||    
T  27714960 aatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 11095453 - 11095377
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgt 103  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | |||||||||||||||||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 11140999 - 11140957
Alignment:
Q  179 gggtgtatgagaataaagggtgtctatgtaacattttccaaac 221  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  11140999 gggtgtatgagactaaagggtgtctatgtaacattttccaaac 11140957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 48587162 - 48587112
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  48587162 gcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtgga 48587112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 8076426 - 8076487
Alignment:
Q  60 tacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||| ||||||| | |||||||||||| |||||||||||||||||| ||||| |||||||    
T  8076426 tacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 11095330 - 11095289
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  11095330 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 11095289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 35536763 - 35536808
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||    
T  35536763 tgtagaagggtgtatgagaataaatggtgtctatgtaacattttcc 35536808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 36707494 - 36707445
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    ||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  36707494 caatacaccctttgacatccacacaaaaatctgacacgtagttacgtgga 36707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 30162779 - 30162724
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    ||||||||| ||||  ||||||||||||| ||||||||||||||||| ||||||||    
T  30162779 tcaaatagcctagttgctagagaaattcaccttaaaatgaataagtgaggtgtccg 30162724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 36590513 - 36590458
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    ||||||||  ||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  36590513 tcaaatagtctagtggctagagaaattcaccttaaaatgaataagtgaggtgtccg 36590458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 38668236 - 38668177
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgggatttaaactcc 385  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||| ||||||| ||||||    
T  38668236 tagtggctagagaaattcaccttaaagatgaataagtggggtgtcagggatttcaactcc 38668177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 8956899 - 8956945
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||    
T  8956899 tgtagaagggtgtatgagaataaatgctgtctatgtaacattttcca 8956945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 47864754 - 47864696
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  47864754 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 47864696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 49429578 - 49429520
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||||||||||| | ||||||||||||| ||||||  |||||||||||||||||||||    
T  49429578 tcaaatagcttagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggg 49429520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 7047593 - 7047650
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatattt 279  Q
    ||||| |||||| |||||||| |||||||||||||||||| |||  ||||||||||||    
T  7047593 ttttttgagggattaaaacttgaaatttaaaaattttatatggaaaaaaaatatattt 7047650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 8076530 - 8076575
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||    
T  8076530 tgtacaaaagtgtatgagaataaatggtgtctatgtaacattttcc 8076575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 11347885 - 11347840
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||    
T  11347885 tgtataagggtgtatgggaataaagggtgtctatgtaccattttcc 11347840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 14623802 - 14623757
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||    
T  14623802 tgtagaaggatgtatgagaataaatggtgtctatgtaacattttcc 14623757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 26141493 - 26141448
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||    
T  26141493 tgtacaagagtgtatggaaataaagggtgtctatgtaacattttcc 26141448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 26754724 - 26754789
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| || |||||| |||||||||||||||| || ||||| ||||| ||||| |||||||    
T  26754724 gcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 29677821 - 29677877
Alignment:
Q  230 gggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaacacttt 287  Q
    ||||||||| ||| |||||||||||||| ||| |||||||||| ||||||||||||||    
T  29677821 gggactaaaccttgaaatttaaaaattt-ataaggatcaaaaacatatttaacacttt 29677877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 33118813 - 33118768
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||    
T  33118813 tgtacaagggtgtatggaaataaagggtgtctacgtaacattttcc 33118768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 33118921 - 33118872
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    ||||||||| ||||||| | |||||||||| |||||||||||||||||||    
T  33118921 caatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 41189727 - 41189682
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||    
T  41189727 tgtacaagagtgtatggaaataaagggtgtctatgtaacattttcc 41189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 47532002 - 47532047
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||    
T  47532002 tgtacaagtgtgtatgggaataaagggtgtttatgtaacattttcc 47532047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 49607551 - 49607592
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  49607551 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 49607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 50381816 - 50381771
Alignment:
Q  333 ctagagaaattcatcttaaa-atgaataagtggggtgtccgggatt 377  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  50381816 ctagagaaattcaccttaaagatgaataagtggggtgtccgggatt 50381771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 50520289 - 50520244
Alignment:
Q  229 agggactaaaacttaaaatttaaaaattttatagggatcaaaaata 274  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||    
T  50520289 agggagtaaaacttgaaatttgaaaattttatagggatcaaaaata 50520244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 11347992 - 11347928
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||| | ||||||||| ||||||||||||||||||| | ||| ||||| | |||||||||||    
T  11347992 caatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 11907514 - 11907550
Alignment:
Q  182 tgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    ||||||| |||||||||||||||||||||||||||||    
T  11907514 tgtatgaaaataaagggtgtctatgtaacattttcca 11907550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 28041429 - 28041477
Alignment:
Q  224 tttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaa 272  Q
    ||||||||||||||| |||||||||| ||| |||||||||||| |||||    
T  28041429 tttagagggactaaatcttaaaatttgaaatttttatagggataaaaaa 28041477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 29645814 - 29645862
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  29645814 tagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 29645862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 985906 - 985957
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgggatt 377  Q
    ||||| ||||||||||||| ||| || |||||||||||||||||||||||||    
T  985906 tagtggctagagaaattcacctttaagatgaataagtggggtgtccgggatt 985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 35093722 - 35093769
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaa 219  Q
    ||||||| |||||||||||||||| | |||||| ||||||||||||||    
T  35093722 tgtacaaaggtgtatgagaataaatgatgtctaggtaacattttccaa 35093769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 43746476 - 43746519
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatttt 215  Q
    ||||||||||||||||| || ||||||||| |||||||||||||    
T  43746476 tgtacaagggtgtatgacaacaaagggtgtttatgtaacatttt 43746519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 27817045 - 27817103
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| |||||||| |||||||||||||    
T  27817045 tcaagtagcctagtggctagagaaattcaacttaaagatgaataaatggggtgtccggg 27817103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 370
Target Start/End: Original strand, 33528182 - 33528236
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtc 370  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||||    
T  33528182 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtc 33528236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 36198457 - 36198487
Alignment:
Q  251 aaaattttatagggatcaaaaatatatttaa 281  Q
    |||||||||||||||||||||||||||||||    
T  36198457 aaaattttatagggatcaaaaatatatttaa 36198487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 9563029 - 9563078
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    ||||||| | ||||||||| | | ||||||||||||||||||||||||||    
T  9563029 caatacaacctttgacatccatataaaaatctgacacgtagtcacgtgga 9563078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 11483715 - 11483674
Alignment:
Q  333 ctagagaaattcatcttaaa-atgaataagtggggtgtccgg 373  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  11483715 ctagagaaattcaccttaaagatgaataagtggggtgtccgg 11483674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 26141603 - 26141538
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||| ||| | ||||||||||||||||||| ||||| ||||| || || |||||||    
T  26141603 gcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 26754832 - 26754877
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| ||||||||  ||||||| ||||||||||||||||||||    
T  26754832 tgtacaaaggtgtatggaaataaagagtgtctatgtaacattttcc 26754877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 33644337 - 33644378
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||| ||||||||||| |||||||||||||||||||| ||||    
T  33644337 tgtataagggtgtatgggaataaagggtgtctatgtatcatt 33644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 42823248 - 42823293
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||    
T  42823248 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 42823293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 48587064 - 48587023
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||| |||| |||||||||||||||||||| ||||    
T  48587064 tgtacaagggtatatgggaataaagggtgtctatgtatcatt 48587023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 51419323 - 51419278
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  |||||| ||||| |||||||||||||||    
T  51419323 tgtacaagggtgtatggaaataaaaggtgtttatgtaacattttcc 51419278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 53982148 - 53982189
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||| |||||| |||||||||||||||||||| ||||    
T  53982148 tgtacaaggttgtatgggaataaagggtgtctatgtatcatt 53982189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 27471612 - 27471564
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||| | |||||| ||||||||||||||||||||||    
T  27471612 tagtggctagagaaatttaccttaaagatgaataagtggggtgtccggg 27471564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 39739382 - 39739334
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||||||||||    
T  39739382 tagtggctagagaaattcaccttaaagatgaataagtgaggtgtccggg 39739334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 40145406 - 40145501
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       |||||||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||| |||||||    
T  40145406 tgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 18520955 - 18520890
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  18520955 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 35785196 - 35785278
Alignment:
Q  31 attgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    |||||||||||||||||||||||||       |||||||||||||||||| | |||||||||||||||||||||| |||||||    
T  35785196 attgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtgga 35785278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 36733042 - 36732948
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||| | ||||||||||||||||| ||||||||||||| ||||| |||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 2740303 - 2740368
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||  ||||| |||||||    
T  2740303 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 13811681 - 13811746
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||| | ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  13811681 gcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 31009125 - 31009170
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31009125 tgtacaaaggtgtatgagaataaagggtgtctatgtaacattttcc 31009170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 42414373 - 42414308
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||    
T  42414373 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 12375384 - 12375439
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  12375384 tcaaatagcctagtggctagagaaattcaccttaaaatgaataagtgaggtgtccg 12375439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 15696329 - 15696274
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  15696329 tcaaatagcctagtggctagagaaattcaccttaaaatgaataagtgaggtgtccg 15696274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 6679727 - 6679784
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||| ||||| |||||    
T  6679727 gcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgca 6679784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 14831843 - 14831908
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||| ||||||||||||||||||||||||||  ||||| |||||||    
T  14831843 gcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 15409573 - 15409528
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  15409573 tgtacaagggtgtatgcgaataaagggtgtttatgtaacattttcc 15409528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 33149739 - 33149644
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       | |||||||| ||||||| | |||||||||| |||||||||||||||||||  ||||| |||||||    
T  33149739 tgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 35240468 - 35240534
Alignment:
Q  223 ttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaacactttatt 290  Q
    ||||||||||||||||||||||| || | | |||| ||||||| |||||||||||||||| |||||||    
T  35240468 ttttagagggactaaaacttaaagttgacatattt-atagggaccaaaaatatatttaaccctttatt 35240534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 43227976 - 43227926
Alignment:
Q  325 cttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  43227976 cttagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 43227926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 2177501 - 2177546
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||    
T  2177501 tgtacaagggtgtatgagaataaaatgtgtctctgtaacattttcc 2177546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 2740411 - 2740452
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  2740411 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 2740452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 16115295 - 16115254
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  16115295 tgtacaagagtgtatgagaataaagggtgtctatgtatcatt 16115254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 18520847 - 18520806
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  18520847 tgtacaagggtgtatgaaaataaagggtgtctatgtatcatt 18520806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 21370141 - 21370186
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||    
T  21370141 tgtacaaaggtgtatgaaaataaagggtgtttatgtaacattttcc 21370186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 28177804 - 28177861
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    |||||||||| ||||||| | ||||||||||||||||||| ||||| ||||| |||||    
T  28177804 gcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgca 28177861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 33149601 - 33149560
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  33149601 tgtacaagggtgtacgagaataaagggtgtctatgtatcatt 33149560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 40145544 - 40145585
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  40145544 tgtacaagggtatatgagaataaagggtgtctatgtatcatt 40145585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 6679835 - 6679879
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||    
T  6679835 tgtacaagggtgtatgacaataaatgatgtctatgtaacattttc 6679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 31009038 - 31009082
Alignment:
Q  77 acacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||    
T  31009038 acacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 31250255 - 31250207
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  31250255 tagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 31250207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 9603950 - 9603993
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatttt 215  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||    
T  9603950 tgtacaaaggtgtatgagaataaatggtgtctacgtaacatttt 9603993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 15409670 - 15409616
Alignment:
Q  67 tttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||| | ||||||||||||||||||||| ||| ||||| ||||| |||||||    
T  15409670 tttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 31132394 - 31132436
Alignment:
Q  77 acacaaaaatctgacacgtagtcacgtggactccgcataagca 119  Q
    |||||||||||||||| |||||||||||||| ||||| |||||    
T  31132394 acacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 35943963 - 35943913
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    |||||||| | ||||||| | |||||||||||||||||||||| |||||||    
T  35943963 gcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtgga 35943913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 38503250 - 38503292
Alignment:
Q  333 ctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  38503250 ctagagaaattcaccttaaagatgaataagtggggtgtccggg 38503292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 2252131 - 2252086
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||    
T  2252131 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 2252086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 3921228 - 3921183
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||    
T  3921228 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 3921183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 14831951 - 14831992
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||| |||||| |||||||||||||||||||| ||||    
T  14831951 tgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14831992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 26720653 - 26720698
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||||    
T  26720653 tgtactagggtgtatgagaataaatgatgtctatataacattttcc 26720698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 26990402 - 26990447
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||||    
T  26990402 tgtactagggtgtatgagaataaatgatgtctatataacattttcc 26990447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 31132471 - 31132512
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||| |||||||||||| |||||| ||||    
T  31132471 tgtacaagggtgtatgaaaataaagggtgtttatgtatcatt 31132512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 36732905 - 36732872
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctat 205  Q
    |||||||||||||||| |||||||||||||||||    
T  36732905 tgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 118
Target Start/End: Complemental strand, 41470462 - 41470425
Alignment:
Q  81 aaaaatctgacacgtagtcacgtggactccgcataagc 118  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  41470462 aaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 42209034 - 42208977
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgg 373  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||| |||||||||    
T  42209034 tcaagtagcctagtgactagagaaattcaccttaaagatgaataagtgaggtgtccgg 42208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 7577523 - 7577563
Alignment:
Q  231 ggactaaaacttaaaatttaaaaattttatagggatcaaaa 271  Q
    ||||||||||||||||||| ||||||||||  |||||||||    
T  7577523 ggactaaaacttaaaatttgaaaattttatgcggatcaaaa 7577563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 33825287 - 33825243
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    |||| |||| |||||||||||||| |||||| |||||||||||||    
T  33825287 tgtagaaggctgtatgagaataaatggtgtcaatgtaacattttc 33825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 43514587 - 43514555
Alignment:
Q  256 tttatagggatcaaaaatatatttaacacttta 288  Q
    ||||||||||||||||||||||||||| |||||    
T  43514587 tttatagggatcaaaaatatatttaacccttta 43514555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 8080483 - 8080389
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||||||| ||||| ||||||||||||||||||||||||||| ||||| |||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 19436257 - 19436193
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||  |||||||||||||    
T  19436257 caatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 38267038 - 38267134
Alignment:
Q  32 ttgagtaatgatacatagacacccg-------caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||||        ||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  38267038 ttgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 19329871 - 19329936
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||| |||||||    
T  19329871 gcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 4999614 - 4999528
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    ||||||||||||||||||||||       |||||||||||||||||| | |||||||||||||| |||||||||||||||| |||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgca 4999528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 7389389 - 7389483
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||  ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 38837217 - 38837311
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||||| ||  ||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 46033764 - 46033718
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  46033764 tgtacaagggtgtatgagaataaatggtgtctatgtaacattttcca 46033718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 3784024 - 3784089
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||||  ||||| |||||||    
T  3784024 gcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 16374787 - 16374743
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  16374787 tgtacaaaggtgtatgagaataaagggtgtctatgtaacattttc 16374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 36362013 - 36361919
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       |||||||| | ||||||| | ||||||||||||||||||||||||||||||| || || |||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 39255887 - 39255844
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatttt 215  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  39255887 tgtacaagggtgtatgataataaagggtgtctatgtaacatttt 39255844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 3434591 - 3434656
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||| ||||||||||||||||||||  ||||| |||||||    
T  3434591 gcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 21234538 - 21234583
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  21234538 tgtacaatggtgtatgagaataaaaggtgtctatgtaacattttcc 21234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 35137562 - 35137619
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    |||||||||| ||||||| | |||||||||||| |||||||||||||||||| |||||    
T  35137562 gcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgca 35137619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 36361888 - 36361847
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  36361888 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 36361847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 36362151 - 36362192
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  36362151 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 36362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 41423819 - 41423864
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||    
T  41423819 tgtacaaaggtgtatgagaataaagggtgtttatgtaacattttcc 41423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 46374787 - 46374742
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  46374787 tgtacaagggtgtatgggaataaatggtgtctatgtaacattttcc 46374742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 3694397 - 3694461
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||| ||| | |||||||||||||||||||||||| |||||  ||||| |||||||    
T  3694397 caatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 12311041 - 12311089
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  12311041 tgtacaaaggtgtatggaaataaagggtgtctatgtaacattttccaaa 12311089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 32951563 - 32951499
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||| | ||| ||||| |||||||||||| |||||||||||||||||| ||||| |||||||    
T  32951563 caatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 36362026 - 36362120
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    ||||||||||||||||||||||       | |||||| | ||||||| | ||||||||||||||||||||||||||||||| || || |||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 38378337 - 38378279
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaa-tgaataagtggggtgtccggg 374  Q
    |||| ||||||||||  |||||||||||| ||||||| |||||||||||||||||||||    
T  38378337 tcaagtagcttagtgggtagagaaattcaccttaaaaatgaataagtggggtgtccggg 38378279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 48433687 - 48433745
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  48433687 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 48433745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 4999477 - 4999436
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  4999477 tgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 4999436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 8080346 - 8080305
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  8080346 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 8080305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 19329979 - 19330020
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  19329979 tgtacaagggtgtatgggaataaagggtgtctatgtatcatt 19330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 32951456 - 32951415
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  32951456 tgtacaagggtgtatgagaataaggggtgtctatgtatcatt 32951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 35523013 - 35523058
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||    
T  35523013 tgtacaagggtgtatgggaataaatggtgtttatgtaacattttcc 35523058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 19436150 - 19436114
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgta 208  Q
    |||||||||||||||||||||||| ||||||||||||    
T  19436150 tgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 38044334 - 38044382
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||||    
T  38044334 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttccaaa 38044382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 4956069 - 4956124
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtcc 371  Q
    |||| |||| ||||| ||||||||||||| |||||| |||||||||||||||||||    
T  4956069 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtcc 4956124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 18207316 - 18207359
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatttt 215  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||    
T  18207316 tgtacaagggtgtatgataataaagggtatctatctaacatttt 18207359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 35468818 - 35468771
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaa 219  Q
    |||| |||| |||||||||||||| ||||| |||||||||||||||||    
T  35468818 tgtataaggatgtatgagaataaaaggtgtatatgtaacattttccaa 35468771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 16374883 - 16374845
Alignment:
Q  68 ttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  16374883 ttgacatccacacaaaaatctgacacgtggtcacgtgga 16374845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 22343498 - 22343544
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||    
T  22343498 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcca 22343544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 28914854 - 28914912
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaa-tgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| ||| ||| |||||||||||||||||||||    
T  28914854 tcaagtagcctagtggctagagaaattcacctttaaagtgaataagtggggtgtccggg 28914912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 32986462 - 32986392
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccgggatttaaactccga 387  Q
    ||||||||| ||||| ||||||||||||| || ||  ||||||||||  |||||||||||| |||| ||||    
T  32986462 tcaaatagcctagtggctagagaaattcacctaaatgtgaataagtgaagtgtccgggattcaaaccccga 32986392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 374
Target Start/End: Complemental strand, 40273923 - 40273881
Alignment:
Q  333 ctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  40273923 ctagagaaattcaccttaaagatgaataagtggggtgtccggg 40273881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 40957736 - 40957786
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    |||||||||  ||||| | | ||||||||||||||||||||||||||||||    
T  40957736 gcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtgga 40957786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 3434689 - 3434730
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||| |||||| |||||||||||||||||||| ||||    
T  3434689 tgtacaaggctgtatgggaataaagggtgtctatgtatcatt 3434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 8238242 - 8238299
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    |||||||||| ||||||| | |||||||||||||||| |||||||  ||||| |||||    
T  8238242 gcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgca 8238299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 282
Target Start/End: Original strand, 28924882 - 28924911
Alignment:
Q  253 aattttatagggatcaaaaatatatttaac 282  Q
    ||||||||||||||||||||||||||||||    
T  28924882 aattttatagggatcaaaaatatatttaac 28924911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 31736014 - 31736059
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||||||||||||||| ||||||| ||| ||||| |||||||||||    
T  31736014 tgtacaagggtgtatgggaataaaaggtatctatctaacattttcc 31736059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 36208304 - 36208337
Alignment:
Q  185 atgagaataaagggtgtctatgtaacattttcca 218  Q
    |||| |||||||||||||||||||||||||||||    
T  36208304 atgaaaataaagggtgtctatgtaacattttcca 36208337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 38837354 - 38837395
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||  ||||||||||||||||||| ||||    
T  38837354 tgtacaagggtgtatggaaataaagggtgtctatgtatcatt 38837395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 40957844 - 40957885
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  40957844 tgtacaagggtgtatgaaaataatgggtgtctatgtatcatt 40957885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 370
Target Start/End: Complemental strand, 48619909 - 48619860
Alignment:
Q  322 tagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtc 370  Q
    |||||||||| ||||||||||||| |||||| |||||||||||| |||||    
T  48619909 tagcttagtggctagagaaattcaccttaaagatgaataagtggagtgtc 48619860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 2318204 - 2318160
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    ||||||| ||||||||  ||||||| |||||||||||||||||||    
T  2318204 tgtacaaaggtgtatggaaataaagtgtgtctatgtaacattttc 2318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 282
Target Start/End: Complemental strand, 6330866 - 6330838
Alignment:
Q  254 attttatagggatcaaaaatatatttaac 282  Q
    |||||||||||||||||||||||||||||    
T  6330866 attttatagggatcaaaaatatatttaac 6330838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 23824579 - 23824627
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| |||||||||| |||||||||||    
T  23824579 tagtggctagagaaattcaccttaaagatgaataagtagggtgtccggg 23824627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 26296781 - 26296829
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||||||||||||  |||| | |||||||| |||||||||||||||    
T  26296781 tgtacaagggtgtatggaaatatatggtgtctacgtaacattttccaaa 26296829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 31793576 - 31793528
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| |||||||||| || |||||| ||||||||||||||||||||||    
T  31793576 tagtggctagagaaatccaccttaaagatgaataagtggggtgtccggg 31793528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 32045974 - 32046018
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    ||||||||||||||||  |||||||  ||||||||||||||||||    
T  32045974 tgtacaagggtgtatgtaaataaagaatgtctatgtaacattttc 32046018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 37563245 - 37563285
Alignment:
Q  334 tagagaaattcatctt-aaaatgaataagtggggtgtccgg 373  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  37563245 tagagaaattcatcttaaaaatgaataagtagggtgtccgg 37563285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 370
Target Start/End: Complemental strand, 43440797 - 43440753
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtc 370  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||    
T  43440797 tagtggctagagaaattcaccttaaagatgaataagtggggtgtc 43440753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 17598553 - 17598648
Alignment:
Q  33 tgagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||||||||||||       |||||||| ||||||||| | ||||||||||||||||||| ||||||||||| ||||| |||||||    
T  17598553 tgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 32869707 - 32869772
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||    
T  32869707 gcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 22422042 - 22421996
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  22422042 tgtacaagggtgtatgagaataaatggtgtctatgtaacattttcca 22421996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 31976385 - 31976431
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcca 218  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  31976385 tgtacaagggtgtatgagaataaatggtgtctatgtaacattttcca 31976431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 22880729 - 22880664
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||||||| | |||||||| |||||||||||||||||||||| ||||| |||||||    
T  22880729 gcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 29857856 - 29857921
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||| ||| | |||||||||||||||||||||| |||||||  |||||||||||||    
T  29857856 gcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 31109471 - 31109414
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  31109471 gcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 15716985 - 15717040
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  15716985 tcaaatagcctagtggctagagaaattcaccttaaaatgaataagtgaggtgtccg 15717040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 11427647 - 11427712
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||| | ||||||| | ||||||||||||||||||||||||||||||  ||||| |||||||    
T  11427647 gcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 11427755 - 11427796
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  11427755 tgtacaagggtgtatgagaataaagggtgtctatgtatcatt 11427796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 6712468 - 6712408
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||| ||||| ||||||||||||| |||||||||||||| || |||||| |||||||||    
T  6712468 tttttatagggaataaaacttaaaatctaaaaattttatagagaccaaaaacatatttaac 6712408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 6712864 - 6712911
Alignment:
Q  235 taaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||    
T  6712864 taaaacttaaaatttaaaaaatttatagggactaaaaatatatttaac 6712911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 6228237 - 6228295
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  6228237 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 6228295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 18903344 - 18903402
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  18903344 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 18903402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 17217076 - 17217019
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccgg 373  Q
    |||| |||| ||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  17217076 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccgg 17217019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 372
Target Start/End: Complemental strand, 19748198 - 19748161
Alignment:
Q  335 agagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  19748198 agagaaattcaccttaaaatgaataagtggggtgtccg 19748161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 26050733 - 26050794
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaaca 283  Q
    |||||| |||| ||||||||| |||||||||| ||||||||||||  |||| ||||||||||    
T  26050733 tttttatagggtctaaaacttgaaatttaaaacttttatagggatataaaacatatttaaca 26050794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 26071902 - 26071963
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaaca 283  Q
    |||||| |||| ||||||||| |||||||||| ||||||||||||  |||| ||||||||||    
T  26071902 tttttatagggtctaaaacttgaaatttaaaacttttatagggatataaaacatatttaaca 26071963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 31952993 - 31952948
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||    
T  31952993 tgtagaaggatgtatgagaataaatggtgtctatgtaacattttcc 31952948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 6209565 - 6209479
Alignment:
Q  34 gagtaatgatacatagacaccc-------gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgca 113  Q
    ||||||||||||||||||||||       |||||||||  |||||||   ||||||||||||| ||||||||||||||||| |||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgca 6209479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 15990005 - 15989957
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||||    
T  15990005 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttccaaa 15989957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 20415549 - 20415597
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  20415549 tagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 20415597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 23128196 - 23128148
Alignment:
Q  58 aatacaccttttgacatctacacaaaaatctgacacgtagtcacgtgga 106  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtgga 23128148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 24794882 - 24794930
Alignment:
Q  327 tagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  24794882 tagtggctagagaaattcatcttaaatatgaataagtgggatgtccggg 24794930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 25549714 - 25549774
Alignment:
Q  224 tttagagggactaaaacttaaaatttaaaaattttatagggat-caaaaatatatttaaca 283  Q
    |||| |||||||||||||| |||||||||| ||||||||| ||  ||||||||||||||||    
T  25549714 tttatagggactaaaacttgaaatttaaaatttttataggaataaaaaaatatatttaaca 25549774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 4231685 - 4231732
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaa 219  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  4231685 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttccaa 4231732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 9763552 - 9763502
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggt 367  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||    
T  9763552 tcaagtagcatagtggctagagaaattcaccttaaagtgaataagtggggt 9763502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 946407 - 946452
Alignment:
Q  58 aatacaccttttgacatctacacaaaaatctgacacgtagtcacgt 103  Q
    |||||||| ||||||| |||| |||||||||||||| |||||||||    
T  946407 aatacaccctttgacacctacccaaaaatctgacacctagtcacgt 946452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 1194697 - 1194734
Alignment:
Q  333 ctagagaaattcatcttaaaatgaataagtggggtgtc 370  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  1194697 ctagagaaattcaccttaaagtgaataagtggggtgtc 1194734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 374
Target Start/End: Original strand, 7954904 - 7954957
Alignment:
Q  322 tagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||| ||| ||||    
T  7954904 tagcctagtggctagagaaattcatcttaaagatgaataagtgggatgttcggg 7954957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 29857964 - 29858005
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| ||||||| |||||||||||| ||||    
T  29857964 tgtacaagggtgtatgggaataaatggtgtctatgtatcatt 29858005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 30341323 - 30341278
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||    
T  30341323 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 30341278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 31110724 - 31110679
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| ||||||||  |||||||| |||||||||||||||||||    
T  31110724 tgtacaaaggtgtatggaaataaaggatgtctatgtaacattttcc 31110679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 32869815 - 32869856
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    ||||||||| |||||| |||||||||||||||||||| ||||    
T  32869815 tgtacaaggatgtatgggaataaagggtgtctatgtatcatt 32869856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 7683923 - 7683982
Alignment:
Q  222 tttttagagggactaaaacttaaaatttaaaaattttatagggatcaaaaatatatttaac 282  Q
    |||||||||||||||||||  |||| |||| |  ||||||||||||||||| |||||||||    
T  7683923 tttttagagggactaaaacg-aaaagttaacatatttatagggatcaaaaacatatttaac 7683982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 30870151 - 30870198
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttccaaa 220  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||| ||||    
T  30870151 tgtacaaaggtgtatgaaaataaagggtgtctat-taacatttttcaaa 30870198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 4058 - 4123
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||||||| ||| | |||||||||||||||||||||| |||||||  |||||||||||||    
T  4058 gcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 4166 - 4207
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacatt 213  Q
    |||||||||||||||| ||||||| |||||||||||| ||||    
T  4166 tgtacaagggtgtatgggaataaatggtgtctatgtatcatt 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 8826 - 8781
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||    
T  8826 tgtacaagggtgtataagaataaaaggtgtctatgtaacattttcc 8781  T

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Target: scaffold0110; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 8933 - 8883
Alignment:
Q  57 caatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggac 107  Q
    ||||||||  |||||||||||||||||||| |||||| |||||||||||||    
T  8933 caatacactatttgacatctacacaaaaatttgacacatagtcacgtggac 8883  T

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Target: scaffold0321 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 10180 - 10129
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggac 107  Q
    |||||||| | ||||||||| ||| |||||||||||||||||||||||||||    
T  10180 gcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggac 10129  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 121771 - 121826
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaaatgaataagtggggtgtccg 372  Q
    ||||||||| ||||| ||||| ||||||| ||||||||||||||||| ||||||||    
T  121771 tcaaatagcctagtggctagataaattcaccttaaaatgaataagtgaggtgtccg 121826  T

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Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 152635 - 152679
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||    
T  152635 tgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttc 152679  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 374
Target Start/End: Complemental strand, 419830 - 419772
Alignment:
Q  317 tcaaatagcttagtgtctagagaaattcatcttaaa-atgaataagtggggtgtccggg 374  Q
    |||| |||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||    
T  419830 tcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggg 419772  T

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Target: scaffold1268 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 1000 - 935
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||| ||||| ||||||||| |||||||||||||||||| |  ||||| |||||||    
T  1000 gcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

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Target: scaffold1268; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 892 - 848
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  892 tgtacaagagtgtatgggaataaagggtgtttatgtaacattttc 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 1000 - 935
Alignment:
Q  56 gcaatacaccttttgacatctacacaaaaatctgacacgtagtcacgtggactccgcataagcaca 121  Q
    |||||||||| ||| ||||| ||||||||| |||||||||||||||||| |  ||||| |||||||    
T  1000 gcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

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Target: scaffold1267; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 892 - 848
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttc 216  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||    
T  892 tgtacaagagtgtatgggaataaagggtgtttatgtaacattttc 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 17240 - 17285
Alignment:
Q  172 tgtacaagggtgtatgagaataaagggtgtctatgtaacattttcc 217  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  17240 tgtacaaaggtgtatggaaataaagggtgtctatgtaacattttcc 17285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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