View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0582_high_5 (Length: 271)
Name: NF0582_high_5
Description: NF0582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0582_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 46525414 - 46525300
Alignment:
| Q |
31 |
agcagagacaagaggcaaacaacaactagccagcatagtgaaacaaaatttgaagcttgtttctctgcttagatatccggacattgttgtacaatacatt |
130 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46525414 |
agcagagacaagaggcaaacaacaactagccagcatagtgaaacaaaatttgaagcttgtttctctgcttagatatccggacattgttgtacaataca-- |
46525317 |
T |
|
| Q |
131 |
gttgcatgaaacaacttg |
148 |
Q |
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||||||||||||||||| |
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| T |
46525316 |
-ttgcatgaaacaacttg |
46525300 |
T |
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