View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_high_114 (Length: 228)
Name: NF0583_high_114
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_high_114 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 1755716 - 1755527
Alignment:
| Q |
17 |
ataatactaaatagatatgactgattcaccaaaacaaaagtggtgtggtaaattgtcaggaaagtgtgatgttttgcaatgttatcgccatctgttgcag |
116 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1755716 |
ataacactaaatagatatgactgattcaccaaaacaaaagtggtgtggtaaattgtcaggaaagtgtgatgttttgcaatgttatcgccatctgttgcag |
1755617 |
T |
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| Q |
117 |
cctttaaggcagggaagaggatcaacaacaagcataataataacgagacactggctacttgatcgaatctttcttggtcgttaaaattgt |
206 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1755616 |
cctttaaggcagggaagaggatcagcaacaagcataataataacgagacactggctacttgatcgaatctttcttggtcgttaaaattgt |
1755527 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 1766034 - 1766223
Alignment:
| Q |
17 |
ataatactaaatagatatgactgattcaccaaaacaaaagtggtgtggtaaattgtcaggaaagtgtgatgttttgcaatgttatcgccatctgttgcag |
116 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1766034 |
ataacactaaatagatatgactgattcaccaaaacaaaagtggtgtggtaaattgtcaggaaagtgtgatgttttgcaatgttatcgccatctgttgcag |
1766133 |
T |
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| Q |
117 |
cctttaaggcagggaagaggatcaacaacaagcataataataacgagacactggctacttgatcgaatctttcttggtcgttaaaattgt |
206 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1766134 |
cctttaaggcagggaagaggatcagcaacaagcataataataacgagacactggctacttgatcgaatctttcttggtcgttaaaattgt |
1766223 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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