View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_high_13 (Length: 609)
Name: NF0583_high_13
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 3 - 409
Target Start/End: Complemental strand, 10194331 - 10193930
Alignment:
| Q |
3 |
ttttcttgtcaattataatttgcgatttatgatcaaacactgttaggcggcatgttcagtaacagatgagttcgaattccttgatcctgatatcaggatg |
102 |
Q |
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| T |
10194331 |
ttttcttgtcaattataatttgcgatttatgatcaaacactgttaggctgcatgttcagtaacagatgagttcgaattccttgatcctgatatcaggatg |
10194232 |
T |
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| Q |
103 |
cctggaatggtgttagggacagaaaattttgataagttccatgttgcagtgaatgcaattgatgcgatgcagtttatgacaaattgcaataccagattat |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
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| T |
10194231 |
cctggaatggtgttagggacagaaaattttgataagttccatgttgcagtgaatgcaattgattc-----agtttatgacaaattgcaataccagattat |
10194137 |
T |
|
| Q |
203 |
gtactactggtataaggttatagaacacatatcatgacagtaaagtaaattgaattctattactgaaaagataagggataaacttccctagatctgttac |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10194136 |
gtactactggtataaggttatagaacacatatcatgacagtaaagtaaattgaattctattactgaaaagataagggataaacttccctagatctgttac |
10194037 |
T |
|
| Q |
303 |
aattcctcaagttccctcactgcttacttttattgacttatttccatcatatatgtaactaacacctaactgtcaccaacaatcccccagctattggtta |
402 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10194036 |
aattcctcaagttccctcactgcttacttttattgacttatttccatcatatatgtaactaacacctaactgtcaccaacaatcccccagctattggtta |
10193937 |
T |
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| Q |
403 |
tgggcac |
409 |
Q |
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||||||| |
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| T |
10193936 |
tgggcac |
10193930 |
T |
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