View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0583_high_3 (Length: 838)

Name: NF0583_high_3
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0583_high_3
NF0583_high_3
[»] chr1 (86 HSPs)
chr1 (10-451)||(1814731-1815174)
chr1 (484-708)||(1815190-1815403)
chr1 (537-681)||(47989484-47989627)
chr1 (512-689)||(32461385-32461561)
chr1 (537-683)||(6427447-6427596)
chr1 (543-682)||(9828036-9828175)
chr1 (534-681)||(18556385-18556532)
chr1 (534-679)||(1486646-1486785)
chr1 (534-682)||(40917734-40917880)
chr1 (569-682)||(31694638-31694751)
chr1 (64-176)||(1830412-1830524)
chr1 (534-658)||(6612123-6612247)
chr1 (537-681)||(5944267-5944413)
chr1 (559-679)||(17778557-17778670)
chr1 (536-633)||(28273065-28273162)
chr1 (535-682)||(37598816-37598951)
chr1 (537-609)||(22881617-22881689)
chr1 (519-614)||(1704988-1705083)
chr1 (537-614)||(24577182-24577259)
chr1 (549-680)||(40258874-40258994)
chr1 (534-681)||(46348323-46348459)
chr1 (542-682)||(25934607-25934747)
chr1 (534-649)||(6414963-6415077)
chr1 (538-649)||(27471527-27471638)
chr1 (534-609)||(42359450-42359525)
chr1 (541-615)||(113289-113363)
chr1 (571-649)||(9629861-9629939)
chr1 (534-681)||(22515827-22515963)
chr1 (546-681)||(25361881-25362012)
chr1 (532-680)||(21032188-21032335)
chr1 (537-608)||(13997869-13997940)
chr1 (564-681)||(18337342-18337448)
chr1 (519-609)||(31672896-31672987)
chr1 (538-609)||(38078662-38078733)
chr1 (612-682)||(5898205-5898275)
chr1 (535-609)||(9103624-9103697)
chr1 (534-627)||(5376483-5376576)
chr1 (571-631)||(44482250-44482310)
chr1 (542-609)||(19058857-19058924)
chr1 (569-640)||(30173732-30173803)
chr1 (534-605)||(48450592-48450663)
chr1 (534-592)||(398783-398841)
chr1 (534-682)||(2896060-2896197)
chr1 (611-681)||(18190048-18190118)
chr1 (571-637)||(34371733-34371799)
chr1 (570-675)||(6332689-6332794)
chr1 (538-627)||(10572572-10572661)
chr1 (600-681)||(17408740-17408821)
chr1 (534-606)||(48040465-48040538)
chr1 (523-658)||(12611935-12612073)
chr1 (611-679)||(29163323-29163391)
chr1 (537-609)||(36878447-36878519)
chr1 (569-609)||(51410043-51410083)
chr1 (579-643)||(52284731-52284794)
chr1 (570-681)||(15449170-15449272)
chr1 (559-682)||(16164243-16164366)
chr1 (534-589)||(16812526-16812581)
chr1 (538-681)||(19562556-19562693)
chr1 (537-604)||(30359374-30359441)
chr1 (534-605)||(31015026-31015097)
chr1 (534-608)||(21378561-21378635)
chr1 (535-608)||(32434718-32434792)
chr1 (611-684)||(43492431-43492504)
chr1 (615-679)||(16297223-16297287)
chr1 (616-676)||(26830641-26830701)
chr1 (627-682)||(9690212-9690267)
chr1 (534-605)||(10577740-10577811)
chr1 (610-681)||(27965940-27966011)
chr1 (569-616)||(35919270-35919317)
chr1 (613-676)||(40181922-40181984)
chr1 (632-679)||(42359391-42359438)
chr1 (611-658)||(51410074-51410121)
chr1 (631-681)||(2218297-2218347)
chr1 (569-615)||(8117052-8117098)
chr1 (534-592)||(12443478-12443536)
chr1 (537-603)||(14359529-14359594)
chr1 (635-681)||(16812629-16812675)
chr1 (541-619)||(17754301-17754379)
chr1 (488-518)||(19326909-19326939)
chr1 (534-592)||(34298419-34298477)
chr1 (611-680)||(5927281-5927350)
chr1 (538-602)||(13011223-13011288)
chr1 (534-595)||(15641045-15641106)
chr1 (559-604)||(18190114-18190159)
chr1 (569-606)||(18471318-18471355)
chr1 (538-591)||(21366039-21366092)
[»] chr8 (72 HSPs)
chr8 (532-681)||(15816058-15816207)
chr8 (534-681)||(22651959-22652106)
chr8 (534-682)||(29510232-29510380)
chr8 (543-680)||(29447040-29447177)
chr8 (537-682)||(4673353-4673498)
chr8 (537-682)||(8343302-8343447)
chr8 (534-649)||(2572017-2572132)
chr8 (534-681)||(36450694-36450830)
chr8 (574-681)||(29447467-29447574)
chr8 (537-682)||(22197670-22197815)
chr8 (559-681)||(21465420-21465542)
chr8 (534-609)||(20873052-20873127)
chr8 (571-681)||(26902104-26902214)
chr8 (559-681)||(28745506-28745628)
chr8 (532-682)||(5813573-5813712)
chr8 (536-620)||(13436954-13437038)
chr8 (546-681)||(11927015-11927150)
chr8 (532-602)||(41838131-41838201)
chr8 (544-681)||(11944658-11944795)
chr8 (569-681)||(24858030-24858135)
chr8 (534-609)||(18170483-18170558)
chr8 (534-609)||(18634051-18634126)
chr8 (538-609)||(22595981-22596052)
chr8 (535-614)||(30271287-30271366)
chr8 (538-604)||(41831946-41832012)
chr8 (559-620)||(25566849-25566910)
chr8 (611-679)||(926730-926798)
chr8 (537-609)||(4786339-4786411)
chr8 (537-681)||(18964163-18964309)
chr8 (538-678)||(24727684-24727826)
chr8 (532-607)||(25192350-25192425)
chr8 (548-681)||(27067231-27067360)
chr8 (539-610)||(31556985-31557055)
chr8 (544-610)||(4298886-4298952)
chr8 (559-609)||(4948660-4948710)
chr8 (571-681)||(11803279-11803389)
chr8 (571-661)||(12570458-12570547)
chr8 (534-627)||(28384977-28385070)
chr8 (613-661)||(12570684-12570732)
chr8 (532-620)||(14692441-14692528)
chr8 (532-610)||(22204620-22204700)
chr8 (537-644)||(24362167-24362275)
chr8 (534-681)||(34450961-34451113)
chr8 (537-679)||(44067502-44067644)
chr8 (610-681)||(14134747-14134818)
chr8 (537-604)||(18407705-18407772)
chr8 (622-669)||(22943301-22943348)
chr8 (518-609)||(34897052-34897143)
chr8 (611-681)||(3951476-3951546)
chr8 (559-609)||(8342980-8343030)
chr8 (632-682)||(8343037-8343087)
chr8 (539-609)||(24613509-24613578)
chr8 (616-681)||(16641909-16641974)
chr8 (536-609)||(30077388-30077461)
chr8 (613-658)||(31557047-31557092)
chr8 (571-608)||(40332211-40332248)
chr8 (624-676)||(14639735-14639787)
chr8 (611-679)||(20679337-20679405)
chr8 (537-609)||(24669419-24669491)
chr8 (534-585)||(3677769-3677820)
chr8 (532-579)||(24196628-24196675)
chr8 (569-608)||(31514891-31514930)
chr8 (626-681)||(39820493-39820547)
chr8 (611-658)||(44462158-44462205)
chr8 (611-658)||(44469691-44469738)
chr8 (488-518)||(19177456-19177486)
chr8 (532-610)||(20679395-20679473)
chr8 (611-681)||(24413499-24413569)
chr8 (632-682)||(27213595-27213645)
chr8 (488-518)||(44206254-44206284)
chr8 (571-680)||(2035759-2035866)
chr8 (626-683)||(38487155-38487212)
[»] chr5 (60 HSPs)
chr5 (519-681)||(39698509-39698671)
chr5 (534-658)||(21522733-21522857)
chr5 (534-658)||(21533299-21533423)
chr5 (531-677)||(30183529-30183675)
chr5 (537-658)||(21542016-21542137)
chr5 (537-681)||(31084309-31084447)
chr5 (549-681)||(7677703-7677835)
chr5 (534-682)||(36642691-36642838)
chr5 (534-680)||(6401481-6401627)
chr5 (534-668)||(19579684-19579818)
chr5 (536-626)||(21351889-21351979)
chr5 (534-614)||(13287395-13287475)
chr5 (534-679)||(21190998-21191132)
chr5 (532-609)||(6247603-6247680)
chr5 (519-681)||(42893328-42893479)
chr5 (543-654)||(21814253-21814364)
chr5 (534-669)||(15382460-15382592)
chr5 (540-609)||(33178014-33178083)
chr5 (534-682)||(37328774-37328920)
chr5 (536-680)||(3966488-3966632)
chr5 (534-625)||(19552530-19552619)
chr5 (538-681)||(21576685-21576817)
chr5 (534-605)||(14674252-14674323)
chr5 (611-682)||(43564930-43565001)
chr5 (534-679)||(43001783-43001922)
chr5 (521-609)||(10298539-10298627)
chr5 (538-606)||(24906305-24906373)
chr5 (531-642)||(12641654-12641765)
chr5 (535-681)||(30098310-30098456)
chr5 (571-683)||(14873537-14873643)
chr5 (543-614)||(30135305-30135377)
chr5 (537-628)||(41995457-41995546)
chr5 (535-609)||(8420011-8420085)
chr5 (571-681)||(32766872-32766982)
chr5 (534-595)||(9449452-9449513)
chr5 (537-682)||(11685925-11686069)
chr5 (569-609)||(15884006-15884046)
chr5 (615-683)||(27932288-27932356)
chr5 (534-602)||(4105240-4105310)
chr5 (611-658)||(30502351-30502398)
chr5 (611-658)||(30542694-30542741)
chr5 (611-678)||(39268541-39268608)
chr5 (540-619)||(41633724-41633803)
chr5 (551-616)||(5894827-5894892)
chr5 (534-591)||(6770526-6770583)
chr5 (535-608)||(17177025-17177098)
chr5 (633-682)||(38464312-38464361)
chr5 (554-683)||(40131624-40131753)
chr5 (633-681)||(19820328-19820376)
chr5 (559-606)||(7218271-7218318)
chr5 (610-681)||(17123096-17123166)
chr5 (569-628)||(21319927-21319986)
chr5 (542-609)||(28588675-28588742)
chr5 (605-675)||(15588632-15588707)
chr5 (534-592)||(22013397-22013455)
chr5 (543-609)||(30099039-30099105)
chr5 (571-681)||(41091186-41091296)
chr5 (532-584)||(6072339-6072392)
chr5 (569-618)||(12199948-12199997)
chr5 (622-679)||(24238603-24238660)
[»] chr7 (81 HSPs)
chr7 (536-681)||(24339627-24339772)
chr7 (538-682)||(7438693-7438837)
chr7 (534-681)||(43027404-43027545)
chr7 (536-682)||(5409770-5409910)
chr7 (543-681)||(25822647-25822785)
chr7 (559-679)||(26033392-26033512)
chr7 (542-644)||(11665406-11665508)
chr7 (537-628)||(9408316-9408407)
chr7 (611-681)||(598257-598327)
chr7 (564-682)||(9778513-9778625)
chr7 (534-676)||(13770674-13770810)
chr7 (516-649)||(32308079-32308218)
chr7 (569-681)||(32093954-32094061)
chr7 (569-681)||(2334268-2334379)
chr7 (537-673)||(6630849-6630985)
chr7 (569-661)||(21560521-21560613)
chr7 (534-614)||(27945024-27945104)
chr7 (539-627)||(11272569-11272659)
chr7 (611-681)||(21880201-21880271)
chr7 (537-662)||(15902808-15902933)
chr7 (536-609)||(25481887-25481960)
chr7 (537-638)||(26329354-26329455)
chr7 (534-610)||(11061076-11061152)
chr7 (536-684)||(15680794-15680931)
chr7 (569-619)||(18039017-18039067)
chr7 (611-681)||(21864857-21864927)
chr7 (549-609)||(3991322-3991382)
chr7 (534-614)||(18215182-18215262)
chr7 (577-680)||(4794915-4795018)
chr7 (534-605)||(24105661-24105732)
chr7 (559-609)||(19213811-19213861)
chr7 (631-681)||(21568561-21568611)
chr7 (520-610)||(23191865-23191955)
chr7 (571-657)||(27229264-27229350)
chr7 (559-620)||(13300418-13300479)
chr7 (611-680)||(22484074-22484143)
chr7 (611-680)||(32287404-32287473)
chr7 (534-681)||(1433437-1433578)
chr7 (537-609)||(7197298-7197370)
chr7 (537-609)||(8234132-8234204)
chr7 (534-609)||(18213034-18213110)
chr7 (539-615)||(22602705-22602781)
chr7 (538-610)||(33994199-33994271)
chr7 (534-676)||(43249976-43250118)
chr7 (531-658)||(21930609-21930735)
chr7 (538-609)||(35861951-35862022)
chr7 (559-661)||(6028633-6028735)
chr7 (623-681)||(29763129-29763187)
chr7 (604-681)||(38804489-38804567)
chr7 (627-677)||(40287306-40287356)
chr7 (537-601)||(13557750-13557817)
chr7 (534-663)||(19206033-19206162)
chr7 (516-609)||(28155535-28155628)
chr7 (537-625)||(3520327-3520415)
chr7 (534-666)||(18013018-18013150)
chr7 (538-606)||(40287361-40287428)
chr7 (549-592)||(1656674-1656717)
chr7 (611-681)||(7133212-7133283)
chr7 (631-674)||(18215144-18215187)
chr7 (537-592)||(22868028-22868083)
chr7 (534-609)||(26733287-26733362)
chr7 (611-658)||(33994261-33994308)
chr7 (558-681)||(38134335-38134458)
chr7 (613-682)||(1401076-1401143)
chr7 (611-681)||(5835296-5835366)
chr7 (622-688)||(17852060-17852126)
chr7 (611-681)||(18212973-18213043)
chr7 (542-659)||(21831768-21831883)
chr7 (631-681)||(40131939-40131989)
chr7 (538-592)||(41020483-41020537)
chr7 (565-610)||(640127-640172)
chr7 (569-626)||(1885591-1885648)
chr7 (537-610)||(5835233-5835306)
chr7 (632-681)||(6490786-6490835)
chr7 (554-615)||(7058429-7058490)
chr7 (537-610)||(22484011-22484084)
chr7 (577-654)||(22801697-22801774)
chr7 (624-681)||(24105740-24105797)
chr7 (632-685)||(35749957-35750010)
chr7 (534-627)||(37742506-37742599)
chr7 (569-610)||(48438564-48438605)
[»] chr6 (72 HSPs)
chr6 (536-681)||(16766682-16766827)
chr6 (534-682)||(8365447-8365595)
chr6 (536-681)||(10770607-10770748)
chr6 (534-681)||(9107299-9107446)
chr6 (537-681)||(5970037-5970181)
chr6 (534-681)||(17435182-17435329)
chr6 (543-682)||(18367828-18367967)
chr6 (534-679)||(12696307-12696446)
chr6 (534-681)||(34595117-34595253)
chr6 (569-681)||(8713998-8714110)
chr6 (534-682)||(8776907-8777049)
chr6 (559-658)||(9522899-9522998)
chr6 (554-680)||(31384923-31385048)
chr6 (538-682)||(10339053-10339198)
chr6 (534-681)||(28152082-28152217)
chr6 (543-654)||(16488546-16488657)
chr6 (537-682)||(16833294-16833428)
chr6 (599-677)||(23130405-23130483)
chr6 (537-681)||(3209367-3209518)
chr6 (534-680)||(17841530-17841665)
chr6 (534-609)||(426515-426590)
chr6 (538-609)||(7801157-7801228)
chr6 (537-682)||(17327589-17327728)
chr6 (571-681)||(25038000-25038110)
chr6 (540-609)||(7977831-7977900)
chr6 (538-658)||(17302543-17302664)
chr6 (541-609)||(853860-853928)
chr6 (534-614)||(7930288-7930368)
chr6 (611-682)||(28715344-28715415)
chr6 (538-604)||(1681745-1681811)
chr6 (611-681)||(7378028-7378098)
chr6 (611-681)||(24645530-24645600)
chr6 (538-668)||(26562676-26562806)
chr6 (572-681)||(7248379-7248488)
chr6 (536-609)||(7938101-7938174)
chr6 (573-682)||(10294129-10294238)
chr6 (537-609)||(5626697-5626769)
chr6 (534-668)||(3398602-3398729)
chr6 (534-609)||(15489733-15489808)
chr6 (538-605)||(31959146-31959213)
chr6 (559-609)||(403865-403915)
chr6 (519-609)||(7265594-7265684)
chr6 (536-614)||(19044449-19044527)
chr6 (534-679)||(5000557-5000702)
chr6 (611-682)||(4877992-4878062)
chr6 (631-678)||(9025448-9025495)
chr6 (539-681)||(32313392-32313535)
chr6 (599-681)||(32839571-32839654)
chr6 (611-678)||(32978842-32978909)
chr6 (534-681)||(34073278-34073423)
chr6 (534-592)||(9658862-9658920)
chr6 (572-614)||(9911524-9911566)
chr6 (519-610)||(27904036-27904129)
chr6 (632-680)||(6665282-6665331)
chr6 (536-609)||(6898282-6898355)
chr6 (534-603)||(17341671-17341740)
chr6 (518-609)||(32978900-32978986)
chr6 (534-614)||(9027161-9027241)
chr6 (542-681)||(9629374-9629513)
chr6 (534-609)||(23771562-23771636)
chr6 (539-586)||(24115871-24115918)
chr6 (605-678)||(8389411-8389484)
chr6 (571-637)||(9195727-9195793)
chr6 (611-657)||(9658928-9658974)
chr6 (536-626)||(21395292-21395381)
chr6 (626-680)||(31959214-31959268)
chr6 (547-604)||(1191706-1191763)
chr6 (564-609)||(1700365-1700410)
chr6 (536-609)||(5732511-5732584)
chr6 (540-609)||(19040341-19040410)
chr6 (638-679)||(26178620-26178661)
chr6 (538-626)||(34290063-34290149)
[»] scaffold0003 (2 HSPs)
scaffold0003 (534-681)||(241577-241724)
scaffold0003 (631-682)||(236913-236964)
[»] chr3 (78 HSPs)
chr3 (537-682)||(41961578-41961723)
chr3 (543-682)||(14209105-14209244)
chr3 (516-681)||(27505211-27505370)
chr3 (538-679)||(4987222-4987363)
chr3 (534-680)||(14216875-14217021)
chr3 (534-680)||(14223004-14223150)
chr3 (534-682)||(28812499-28812646)
chr3 (537-681)||(34185052-34185196)
chr3 (534-658)||(15796246-15796370)
chr3 (534-657)||(14832082-14832205)
chr3 (537-680)||(15999951-16000089)
chr3 (534-681)||(55401058-55401194)
chr3 (559-682)||(49651715-49651837)
chr3 (537-677)||(14829676-14829816)
chr3 (548-682)||(55212960-55213093)
chr3 (537-681)||(20503451-20503584)
chr3 (534-679)||(28917984-28918120)
chr3 (535-658)||(2620007-2620128)
chr3 (519-681)||(18426917-18427068)
chr3 (543-631)||(34910309-34910397)
chr3 (538-609)||(10954939-10955010)
chr3 (534-638)||(750590-750695)
chr3 (536-681)||(17005548-17005693)
chr3 (542-681)||(8039764-8039903)
chr3 (534-609)||(8587022-8587097)
chr3 (538-681)||(9800027-9800170)
chr3 (534-609)||(10335287-10335362)
chr3 (536-610)||(10268486-10268560)
chr3 (559-681)||(16789020-16789141)
chr3 (519-616)||(25948881-25948978)
chr3 (537-609)||(21479104-21479176)
chr3 (540-607)||(26508099-26508166)
chr3 (536-679)||(29508429-29508567)
chr3 (611-682)||(40993274-40993345)
chr3 (611-681)||(11252025-11252095)
chr3 (536-609)||(25775493-25775567)
chr3 (537-649)||(25064895-25065005)
chr3 (537-614)||(39756222-39756299)
chr3 (616-676)||(16192667-16192727)
chr3 (559-626)||(1509547-1509614)
chr3 (534-609)||(26492206-26492281)
chr3 (559-609)||(51206354-51206404)
chr3 (615-683)||(7171554-7171622)
chr3 (599-679)||(13806284-13806363)
chr3 (534-609)||(8383240-8383315)
chr3 (521-592)||(29112298-29112369)
chr3 (631-681)||(11610578-11610628)
chr3 (537-614)||(14747547-14747625)
chr3 (534-604)||(24205047-24205117)
chr3 (534-615)||(3164020-3164101)
chr3 (534-627)||(4990950-4991043)
chr3 (605-681)||(14223788-14223864)
chr3 (537-586)||(40052318-40052367)
chr3 (537-609)||(3610619-3610691)
chr3 (569-609)||(8593155-8593195)
chr3 (536-592)||(14979166-14979222)
chr3 (571-631)||(16192729-16192789)
chr3 (538-606)||(21256990-21257058)
chr3 (537-617)||(22774063-22774143)
chr3 (636-680)||(25211604-25211648)
chr3 (537-649)||(26290357-26290469)
chr3 (537-609)||(35222924-35222996)
chr3 (536-604)||(35994744-35994811)
chr3 (630-682)||(40052380-40052432)
chr3 (534-609)||(10318036-10318110)
chr3 (540-603)||(11610510-11610573)
chr3 (638-681)||(12083959-12084002)
chr3 (610-649)||(14338455-14338494)
chr3 (519-590)||(23870579-23870650)
chr3 (559-609)||(7928458-7928508)
chr3 (571-657)||(11665964-11666050)
chr3 (627-681)||(17276792-17276846)
chr3 (604-681)||(21211335-21211413)
chr3 (534-592)||(21720747-21720805)
chr3 (611-681)||(35222987-35223057)
chr3 (559-609)||(38731226-38731276)
chr3 (628-681)||(27277780-27277832)
chr3 (626-683)||(27903702-27903759)
[»] chr4 (79 HSPs)
chr4 (543-682)||(24613629-24613768)
chr4 (537-682)||(19482654-19482799)
chr4 (517-682)||(22234818-22234984)
chr4 (571-680)||(30982808-30982917)
chr4 (536-662)||(27706125-27706251)
chr4 (534-681)||(23292926-23293062)
chr4 (569-679)||(19312353-19312463)
chr4 (537-680)||(3947702-3947839)
chr4 (534-681)||(5414101-5414248)
chr4 (570-681)||(47264005-47264116)
chr4 (521-631)||(4383338-4383447)
chr4 (535-681)||(36635308-36635449)
chr4 (534-681)||(24343490-24343632)
chr4 (532-602)||(11651142-11651212)
chr4 (559-679)||(28000672-28000794)
chr4 (534-681)||(35157925-35158061)
chr4 (569-681)||(715545-715648)
chr4 (569-681)||(752871-752974)
chr4 (537-609)||(21945489-21945561)
chr4 (534-609)||(30298929-30299005)
chr4 (534-609)||(30327797-30327873)
chr4 (537-644)||(40481623-40481723)
chr4 (537-680)||(847937-848080)
chr4 (610-681)||(8423658-8423729)
chr4 (534-609)||(12797339-12797413)
chr4 (542-609)||(12895275-12895342)
chr4 (541-678)||(28084511-28084640)
chr4 (611-681)||(34306744-34306814)
chr4 (517-654)||(37496665-37496807)
chr4 (532-609)||(16303267-16303344)
chr4 (616-680)||(14465006-14465070)
chr4 (535-609)||(49431009-49431084)
chr4 (546-609)||(54580024-54580087)
chr4 (534-608)||(6485613-6485687)
chr4 (537-614)||(12708132-12708210)
chr4 (534-616)||(12895110-12895191)
chr4 (534-676)||(30838193-30838335)
chr4 (519-681)||(46083920-46084081)
chr4 (537-614)||(11596348-11596425)
chr4 (536-609)||(16073380-16073452)
chr4 (559-608)||(29205452-29205501)
chr4 (534-681)||(7012049-7012197)
chr4 (622-682)||(35161096-35161156)
chr4 (569-609)||(42640547-42640587)
chr4 (534-649)||(903905-904020)
chr4 (537-681)||(15029751-15029890)
chr4 (610-681)||(21345473-21345544)
chr4 (537-607)||(24543967-24544038)
chr4 (611-681)||(2361915-2361985)
chr4 (632-682)||(18513174-18513224)
chr4 (559-609)||(28964249-28964299)
chr4 (531-609)||(34306805-34306882)
chr4 (559-633)||(51701266-51701340)
chr4 (633-682)||(11596296-11596345)
chr4 (569-681)||(11931298-11931410)
chr4 (538-645)||(20743242-20743350)
chr4 (534-627)||(40742574-40742667)
chr4 (631-683)||(944600-944652)
chr4 (537-609)||(2361976-2362048)
chr4 (611-679)||(4157198-4157266)
chr4 (611-679)||(4157485-4157553)
chr4 (601-681)||(15724483-15724563)
chr4 (611-682)||(53381529-53381601)
chr4 (633-680)||(5922532-5922579)
chr4 (570-609)||(6879466-6879505)
chr4 (622-681)||(18966569-18966628)
chr4 (622-681)||(29205528-29205587)
chr4 (634-681)||(37203324-37203371)
chr4 (534-609)||(40179637-40179712)
chr4 (630-676)||(3712458-3712504)
chr4 (599-681)||(5225542-5225624)
chr4 (624-682)||(7214465-7214523)
chr4 (615-681)||(16886660-16886726)
chr4 (543-609)||(38847013-38847079)
chr4 (550-615)||(5775353-5775418)
chr4 (633-682)||(16184902-16184951)
chr4 (632-677)||(34594208-34594253)
chr4 (571-668)||(38148667-38148764)
chr4 (537-615)||(50280867-50280947)
[»] chr2 (69 HSPs)
chr2 (536-681)||(11223793-11223937)
chr2 (537-681)||(26769497-26769641)
chr2 (535-682)||(37419727-37419874)
chr2 (534-681)||(34784911-34785058)
chr2 (534-681)||(30717459-30717606)
chr2 (534-679)||(15657847-15657992)
chr2 (534-681)||(30404790-30404926)
chr2 (518-681)||(27084229-27084388)
chr2 (579-681)||(35056896-35056998)
chr2 (537-679)||(36756275-36756417)
chr2 (532-680)||(27286222-27286370)
chr2 (534-609)||(18421946-18422021)
chr2 (536-681)||(18840953-18841087)
chr2 (534-609)||(15972856-15972931)
chr2 (527-681)||(12668352-12668506)
chr2 (536-609)||(20242728-20242801)
chr2 (534-679)||(2438661-2438793)
chr2 (534-609)||(19536398-19536474)
chr2 (534-676)||(23058389-23058519)
chr2 (534-609)||(37558960-37559035)
chr2 (538-681)||(21782744-21782890)
chr2 (537-681)||(38117099-38117232)
chr2 (559-628)||(4882678-4882747)
chr2 (534-639)||(34337152-34337252)
chr2 (537-654)||(36096331-36096448)
chr2 (571-680)||(44860340-44860449)
chr2 (534-606)||(6940238-6940310)
chr2 (534-681)||(41843424-41843565)
chr2 (534-609)||(20539675-20539750)
chr2 (534-616)||(24894372-24894454)
chr2 (579-681)||(24975255-24975356)
chr2 (571-681)||(32749754-32749864)
chr2 (534-669)||(14996171-14996300)
chr2 (540-681)||(18420363-18420504)
chr2 (534-603)||(21374706-21374775)
chr2 (537-609)||(21624252-21624325)
chr2 (572-669)||(28524447-28524544)
chr2 (542-615)||(33153415-33153488)
chr2 (537-609)||(20473308-20473380)
chr2 (537-685)||(28677895-28678037)
chr2 (534-682)||(30335400-30335536)
chr2 (534-604)||(12940941-12941011)
chr2 (632-681)||(12748737-12748786)
chr2 (611-680)||(28596518-28596587)
chr2 (611-682)||(37497169-37497241)
chr2 (550-609)||(974746-974805)
chr2 (532-598)||(29367381-29367448)
chr2 (534-592)||(16069272-16069330)
chr2 (611-681)||(24009344-24009414)
chr2 (611-676)||(12224272-12224337)
chr2 (620-681)||(15907851-15907912)
chr2 (616-681)||(42511322-42511387)
chr2 (569-609)||(5040752-5040792)
chr2 (611-679)||(19942314-19942382)
chr2 (534-610)||(21091706-21091782)
chr2 (571-681)||(18889519-18889630)
chr2 (513-592)||(24009259-24009337)
chr2 (571-634)||(24067273-24067336)
chr2 (538-609)||(38442295-38442365)
chr2 (551-609)||(18255981-18256039)
chr2 (530-592)||(19573958-19574019)
chr2 (534-592)||(21616745-21616803)
chr2 (571-681)||(22084756-22084871)
chr2 (572-681)||(29367283-29367382)
chr2 (627-681)||(37559042-37559096)
chr2 (559-644)||(4207865-4207949)
chr2 (534-607)||(23718009-23718082)
chr2 (534-607)||(24105681-24105754)
chr2 (534-603)||(39323247-39323316)
[»] scaffold0019 (1 HSPs)
scaffold0019 (537-682)||(71709-71856)
[»] scaffold0450 (1 HSPs)
scaffold0450 (523-681)||(8564-8722)
[»] scaffold0123 (1 HSPs)
scaffold0123 (571-681)||(44454-44564)
[»] scaffold0136 (1 HSPs)
scaffold0136 (537-682)||(3777-3922)
[»] scaffold0086 (1 HSPs)
scaffold0086 (569-681)||(2946-3058)
[»] scaffold0004 (3 HSPs)
scaffold0004 (519-680)||(92775-92940)
scaffold0004 (538-609)||(123612-123686)
scaffold0004 (564-609)||(83173-83218)
[»] scaffold0044 (1 HSPs)
scaffold0044 (571-674)||(53200-53303)
[»] scaffold0018 (2 HSPs)
scaffold0018 (534-615)||(178813-178895)
scaffold0018 (532-603)||(192256-192327)
[»] scaffold0306 (1 HSPs)
scaffold0306 (534-679)||(13383-13523)
[»] scaffold0171 (2 HSPs)
scaffold0171 (569-682)||(23529-23642)
scaffold0171 (537-616)||(23406-23485)
[»] scaffold0152 (1 HSPs)
scaffold0152 (534-679)||(21804-21944)
[»] scaffold0053 (1 HSPs)
scaffold0053 (534-681)||(8781-8917)
[»] scaffold0008 (1 HSPs)
scaffold0008 (534-679)||(263303-263448)
[»] scaffold0223 (1 HSPs)
scaffold0223 (534-618)||(20155-20239)
[»] scaffold0103 (1 HSPs)
scaffold0103 (534-638)||(51794-51890)
[»] scaffold0036 (1 HSPs)
scaffold0036 (538-679)||(9678-9819)
[»] scaffold0652 (1 HSPs)
scaffold0652 (534-680)||(403-538)
[»] scaffold0361 (1 HSPs)
scaffold0361 (520-681)||(14498-14646)
[»] scaffold0027 (1 HSPs)
scaffold0027 (534-609)||(46665-46740)
[»] scaffold0512 (1 HSPs)
scaffold0512 (611-681)||(4976-5046)
[»] scaffold0793 (1 HSPs)
scaffold0793 (569-681)||(4821-4924)
[»] scaffold0623 (1 HSPs)
scaffold0623 (536-680)||(5926-6070)
[»] scaffold0246 (1 HSPs)
scaffold0246 (537-644)||(19562-19662)
[»] scaffold0011 (1 HSPs)
scaffold0011 (535-609)||(17750-17824)
[»] scaffold0021 (1 HSPs)
scaffold0021 (534-607)||(130465-130538)
[»] scaffold0083 (1 HSPs)
scaffold0083 (534-609)||(45531-45607)
[»] scaffold0050 (1 HSPs)
scaffold0050 (611-658)||(70327-70374)
[»] scaffold0007 (1 HSPs)
scaffold0007 (534-679)||(225199-225344)
[»] scaffold0057 (1 HSPs)
scaffold0057 (544-682)||(24018-24156)
[»] scaffold0122 (2 HSPs)
scaffold0122 (536-680)||(8651-8795)
scaffold0122 (543-609)||(8002-8067)
[»] scaffold0039 (1 HSPs)
scaffold0039 (538-658)||(84925-85045)
[»] scaffold0025 (1 HSPs)
scaffold0025 (569-609)||(23788-23828)
[»] scaffold0722 (1 HSPs)
scaffold0722 (531-609)||(7033-7111)
[»] scaffold0154 (1 HSPs)
scaffold0154 (594-687)||(13456-13549)
[»] scaffold0227 (1 HSPs)
scaffold0227 (519-602)||(7319-7403)
[»] scaffold0380 (1 HSPs)
scaffold0380 (623-682)||(8662-8721)
[»] scaffold0066 (1 HSPs)
scaffold0066 (543-598)||(33375-33430)
[»] scaffold1528 (1 HSPs)
scaffold1528 (541-619)||(1025-1103)
[»] scaffold0475 (1 HSPs)
scaffold0475 (611-685)||(3357-3431)
[»] scaffold0168 (1 HSPs)
scaffold0168 (534-627)||(21026-21119)
[»] scaffold0116 (1 HSPs)
scaffold0116 (536-609)||(9883-9956)


Alignment Details
Target: chr1 (Bit Score: 377; Significance: 0; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 10 - 451
Target Start/End: Original strand, 1814731 - 1815174
Alignment:
Q  10 aagaatatataact--actaatataataattttggtccatttatgatagactaaactatatttggttcatcaatagaccgatgagagtattcaaatagaa 107  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1814731 aagaatatataactgtactaatataataattttggtccatttatgatagactaaactatatttggttcatcaatagaccgatgagagtattcaaatagaa 1814830  T
Q  108 tatatagaactgttgcattatgcgttgattctatgatattcataatcttatagctaggtagttaggcctttaggcggcctctgtttgtgtgggtcatgtc 207  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  1814831 tatatagaactgttgcattatgtgttgattctatgatattcataatcttatagctaggtagttaggcctttaggcggcctctgtttgcgtcggtcatgtc 1814930  T
Q  208 ttcaactagatcagtgcaggaacaaaggagacggtgagtggctgatcagatgactgcgcgaagggaaggtcgcatggaagtcagttcgcggctgtttgga 307  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  1814931 ttcaactagatcagtgcaggaacaaaggagacggtgaatggctgatcagatgactgcacgaagggaaggtcgcatggaagtcggttcgcggctgtttgga 1815030  T
Q  308 cgcggaagcgtgtttgaagggcacaacggcaatggaggggcgcaaagaggagggcgcggaaacaacgtttttgcagaaaacacagcggctgtggtggcag 407  Q
    || ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1815031 cgtggaagcgtgtttgaagggcacaatggcaatggagcggagcaaagaggagggcgcggaaacaacgtttttgcagaaaacacagcggctgtggtggcgg 1815130  T
Q  408 tgcaagggaggggcgtggcggcagctatatgtgggtgagggttt 451  Q
     |||||||||||| |||||||| |||||||||||||||||||||    
T  1815131 cgcaagggaggggtgtggcggctgctatatgtgggtgagggttt 1815174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 484 - 708
Target Start/End: Original strand, 1815190 - 1815403
Alignment:
Q  484 acacgtgtaggtcaactatctaattatgatacaacctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataat 583  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1815190 acacatgtaggtcaactatctaatcatgatacaacctatgaagcacggatacggacactgacacgccgacacaaataattattttaaaaaatcacataat 1815289  T
Q  584 tcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagga 683  Q
    ||||||||| ||||||           |||||||||| |||||||||| ||||||||||||||||| |||||||||||| |||| | ||| |||||||||    
T  1815290 tcagtgtaattacaag-----------tgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatagga 1815378  T
Q  684 tacaacataattgcaggaaaatcat 708  Q
    |||||||||||||||||||||||||    
T  1815379 tacaacataattgcaggaaaatcat 1815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 537 - 681
Target Start/End: Original strand, 47989484 - 47989627
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||||    
T  47989484 gacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtc 47989582  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
     |||| ||||||| |||||||| ||| |||||| |||||||||||    
T  47989583 tgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 512 - 689
Target Start/End: Complemental strand, 32461561 - 32461385
Alignment:
Q  512 atacaacctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcat 611  Q
    |||||||||| |||||||  |||| |||| |||||||||| ||||| |||| |||| |||||||||||||||| | ||||| ||||||||| |||||  |    
T  32461561 atacaacctaggaagcacggatacagacagtgacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgtg-t 32461463  T
Q  612 gtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcataggatacaac 689  Q
    ||||||||| ||||||||||||||| ||||| |||||| ||||||||  ||||||||| ||||||||||| |||||||    
T  32461462 gtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatagcatacaac 32461385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 537 - 683
Target Start/End: Original strand, 6427447 - 6427596
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaa---aatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||| |||||||||| |||| |||| ||||   |||||||||||||| |||||||||||||||| ||||| ||| || ||| ||||||||||||    
T  6427447 gacactgacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgt 6427546  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagga 683  Q
    |||||||||||||||| |||||||||||  |||||| |||||||||||||    
T  6427547 gtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatagga 6427596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 543 - 682
Target Start/End: Original strand, 9828036 - 9828175
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacac 642  Q
    ||||||||||||| | |||| |||| | |||||||||||||||||||||| |  | ||||||||||| |||| |||||||||||||||||||||||||||    
T  9828036 gacacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacac 9828135  T
Q  643 cgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||| | |||||| ||| |||||| ||||||||||||    
T  9828136 cgggacacgtctaatccgaggagtgtccgtgcttcatagg 9828175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 18556532 - 18556385
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| |||| ||||||||||| | ||||| ||||||| | |||||| || ||||||||||| ||||||||    
T  18556532 acggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgtgacggtgtcagacccgacacgt 18556433  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
     |||||||| |||||| |||||||| |||||||||| |||||||||||    
T  18556432 atccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 1486785 - 1486646
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||| |||||||||| ||||||  |||| |||| |||||||||||||||||||||||| || ||||||||||||| ||||||      |||||||||||    
T  1486785 acggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgg------acacgacacgt 1486692  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||||||||| |||||||| ||| ||||||||||||||||    
T  1486691 gtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 534 - 682
Target Start/End: Original strand, 40917734 - 40917880
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||| |||||||||||||||||  |||| |||| |||||||||||  ||| ||||||| ||||||| |||||||| |||||||||  ||||||||||||    
T  40917734 acggatactgacacgccgacacagctaataatttgaaaaaatcaca--attaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgt 40917831  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||| |||||||| ||| | |||| ||||||||||||    
T  40917832 gtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatagg 40917880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 569 - 682
Target Start/End: Complemental strand, 31694751 - 31694638
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||| |||| | | ||||||||| ||| |||||||||||| |||||    
T  31694751 aaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgt 31694652  T
Q  669 ctgtgcttcatagg 682  Q
    | ||||||||||||    
T  31694651 ccgtgcttcatagg 31694638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 1830412 - 1830524
Alignment:
Q  64 tatatttggttcatcaatagaccgatgagagtattcaaatagaatatatagaactgttgcattatgcgttgattctatgatattcataatcttatagcta 163  Q
    |||||| ||||||| |||| ||| ||||||||||| |||||||||| | | ||||||||||||||| |||||||||||||||  ||||||||||| ||||    
T  1830412 tatattaggttcattaatataccaatgagagtatttaaatagaatacacataactgttgcattatgtgttgattctatgatacgcataatcttatggcta 1830511  T
Q  164 ggtagttaggcct 176  Q
    |||||||||||||    
T  1830512 ggtagttaggcct 1830524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 534 - 658
Target Start/End: Complemental strand, 6612247 - 6612123
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||| ||||||||||| |||  |||| |||| ||||||| |||||||||||||||| |||||||||||||||| ||||| |||| ||||||| | ||    
T  6612247 acggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgt 6612148  T
Q  634 gtccgacaccgggacatgcctaatc 658  Q
    |||||||||| ||||| ||||||||    
T  6612147 gtccgacaccaggacacgcctaatc 6612123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 537 - 681
Target Start/End: Original strand, 5944267 - 5944413
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaa--aatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtg 634  Q
    ||||||||||||||| ||||  |||| |||| ||||  |||||||||||||||||||| || ||||||||||||| ||||| || | ||||| |||| ||    
T  5944267 gacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatg 5944366  T
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||| | |||||||| ||| |||||  |||||||||||    
T  5944367 tccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 559 - 679
Target Start/End: Original strand, 17778557 - 17778670
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| |||||||||||||   |||||||| |||||||||||||||| ||||||||||     |||||||||||||||||||||||||||||||||    
T  17778557 taataatttgaaaaaatcacata---cagtgtaattacaagtgtcggtgtcgtgtcggtgtcg----cgacacgtgtccgacaccgggacatgcctaatc 17778649  T
Q  659 tgagaagtgtctgtgcttcat 679  Q
     |||||||||  |||||||||    
T  17778650 cgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 536 - 633
Target Start/End: Complemental strand, 28273162 - 28273065
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||| || ||||||| |||| |||| ||||||||| |||||||||||||| |||||||||||||||| | ||| |||| ||||||||||||    
T  28273162 ggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcgatgtcggacacgacacgt 28273065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 535 - 682
Target Start/End: Original strand, 37598816 - 37598951
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtg 634  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||| || |||           |||||||||| |||||||||||||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataag-----------tgtcggtgtcggacacgacacgtg 37598903  T
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||  |||||| |||||||| ||| |||||| ||||||||||||    
T  37598904 tccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 22881689 - 22881617
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22881617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 519 - 614
Target Start/End: Complemental strand, 1705083 - 1704988
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    |||||||||||  |||||||||| ||||| ||||||||  |||| |||| ||||||||||||||||||| |||| |||||||||||||||| ||||    
T  1705083 ctatgaagcacggatacggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtc 1704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 614
Target Start/End: Complemental strand, 24577259 - 24577182
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||| ||||||| ||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||| ||||    
T  24577259 gacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 680
Target Start/End: Complemental strand, 40258994 - 40258874
Alignment:
Q  549 ccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggac 648  Q
    ||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||           |||||||||||||| ||||||||||| ||||    
T  40258994 ccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt-----------gtcagacacgacacctgtccgacaccaggac 40258906  T
Q  649 atgcctaatctgagaagtgtctgtgcttcata 680  Q
    | |||||||| ||| ||||||  |||||||||    
T  40258905 acgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 46348459 - 46348323
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| ||||||||| |||||| ||||||| ||||||||||||           |||| ||||||||||||    
T  46348459 acggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcgg-----------tgtcggacacgacacgt 46348371  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||| |||| |||| ||| |||  ||||| |||||||||||    
T  46348370 gtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 682
Target Start/End: Original strand, 25934607 - 25934747
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgaca 641  Q
    |||||||||||||||  ||| | || || ||||||||| ||| |||||||| || | |||||||| || |||||||||| ||||||||||||||| ||||    
T  25934607 tgacacgccgacacagctaaattttctagaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgaca 25934706  T
Q  642 ccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    | |||| | |||| |||  || |||||| ||||||||||||    
T  25934707 cggggatacgccttatccaaggagtgtccgtgcttcatagg 25934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 649
Target Start/End: Complemental strand, 6415077 - 6414963
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||    ||||||||| | ||||||||||||| |||| ||| || | ||||||||||||| ||| |||| ||||||||||||    
T  6415077 acggacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtcat-tcgatgtcggacacgacacgt 6414979  T
Q  634 gtccgacaccgggaca 649  Q
    ||| ||||||| ||||    
T  6414978 gtctgacaccgcgaca 6414963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 538 - 649
Target Start/End: Complemental strand, 27471638 - 27471527
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    |||||||||| |||| ||   |||| |||| | |||| ||||||||||||||||| |||| |||| |||||||| |||||||  || |||||||||||||    
T  27471638 acactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtcatatcggtgttggatacgacacgtgtcc 27471539  T
Q  638 gacaccgggaca 649  Q
    ||||||||||||    
T  27471538 gacaccgggaca 27471527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 42359525 - 42359450
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||| ||||||  |||| |||| ||||||||||| |||||||||||| ||||||||||||||||    
T  42359525 acggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 42359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 615
Target Start/End: Original strand, 113289 - 113363
Alignment:
Q  541 ctgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    ||||||||||||||||  |||| |||| |||||||||||||||||||||||| ||||||||| |||||| |||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcg 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 649
Target Start/End: Complemental strand, 9629939 - 9629861
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggaca 649  Q
    ||||||| |||||||||||| | || ||||||||||||| ||||| |||| |||||||||| |||||||||||||||||    
T  9629939 aaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggaca 9629861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 22515963 - 22515827
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||| ||||||| ||||||  |||| |||| |||||||||||||||| ||||||| ||||||||||||           |||| |||||||||| |    
T  22515963 acggacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg-----------tgtcggacacgacacat 22515875  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
     |||||||||| |||| |||||||| ||| |||||| |||||||||||    
T  22515874 atccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 546 - 681
Target Start/End: Original strand, 25361881 - 25362012
Alignment:
Q  546 acgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgg 645  Q
    |||||||||| | | || |||| | |||||||||||||||||||||| || | ||||| ||||| |||||||||| |||||||||  |||||||||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca--tgtccgacaccgg 25361978  T
Q  646 gacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
     |||  ||||||| ||  |||||| |||||||||||    
T  25361979 aaca--cctaatccgaagagtgtccgtgcttcatag 25362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 532 - 680
Target Start/End: Original strand, 21032188 - 21032335
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacac 631  Q
    |||||||||||||||| | ||||||  |||| |||  ||||||| || ||||| | | ||| ||||| |||||||||| ||| |||||| |||||||||     
T  21032188 atacggacactgacacactgacacagttaataatta-aaaaaattacttaattaaatataattacaaatgtcggtgtcgtgtgggtgtcggacacgacat 21032286  T
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||||||||| || || | ||||||||  || |||||||||||||||||    
T  21032287 gtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 608
Target Start/End: Original strand, 13997869 - 13997940
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgt 608  Q
    |||||||||||||||||||   ||||||||| |||||||||||||||||||||||| || | ||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 564 - 681
Target Start/End: Original strand, 18337342 - 18337448
Alignment:
Q  564 attttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgaga 663  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||            ||||| ||||||||||||||| ||||||||||| ||| |||     
T  18337342 atttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg-----------gacacaacacgtgtccgacactgggacatgcctgatccgagg 18337430  T
Q  664 agtgtctgtgcttcatag 681  Q
    |||||| |||||||||||    
T  18337431 agtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 609
Target Start/End: Complemental strand, 31672987 - 31672896
Alignment:
Q  519 ctatgaagcacaaatacgg-acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||  |||||| |||||||||| ||||||||  |||| |||| |||||||||| ||||||||||||| ||||||| ||||||||    
T  31672987 ctatgaagcacggatacgggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtc 31672896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 538 - 609
Target Start/End: Complemental strand, 38078733 - 38078662
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||| |||||||  |||| |||| |||||||||||||||||| ||||| ||||||||||||||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 38078662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 612 - 682
Target Start/End: Complemental strand, 5898275 - 5898205
Alignment:
Q  612 gtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||| ||| |||||| |||||| |||||    
T  5898275 gtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttatagg 5898205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 535 - 609
Target Start/End: Original strand, 9103624 - 9103697
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||||  |||| |||| |||||||||||||||| ||| ||| ||||||||||||||||    
T  9103624 cggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa-tacaagtgtcggtgtc 9103697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 627
Target Start/End: Complemental strand, 5376576 - 5376483
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg 627  Q
    ||||||||| ||||||||||||   |||| |||| | ||||| |||||||||||||||| || ||||||||||||| ||||| |||| ||||||    
T  5376576 acggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 571 - 631
Target Start/End: Original strand, 44482250 - 44482310
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacac 631  Q
    |||||||||||||||||||||| || | ||||||||||| |||||||||| ||||||||||    
T  44482250 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 609
Target Start/End: Complemental strand, 19058924 - 19058857
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||  |||| |||| |||| || |||||||||||||||| ||||||||||||||||    
T  19058924 tgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 19058857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 640
Target Start/End: Complemental strand, 30173803 - 30173732
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgac 640  Q
    ||||||| |||||| ||||||||| |||||||||||||||| |||| || || |||||||||| ||||||||    
T  30173803 aaaaaattacataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgac 30173732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 605
Target Start/End: Complemental strand, 48450663 - 48450592
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcgg 605  Q
    ||||||||||||||||| |||||  |||| |||| ||||||| |||||||| ||||||| ||||||||||||    
T  48450663 acggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 592
Target Start/End: Complemental strand, 398841 - 398783
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||||||||||||||||||||   |||| |||| ||||||||||||||||||||||||    
T  398841 acggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaa 398783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 682
Target Start/End: Complemental strand, 2896197 - 2896060
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||||||||||||   |||| |||| | ||||||||||||||||||||| ||| |            ||||||||||||||||||||| ||    
T  2896197 acggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatat-----------atgtcggtgtcagacacgacatgt 2896109  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||| |||||||||  |||||||  |||||||||  || ||||||||    
T  2896108 gtccgagaccgggacacacctaatccaagaagtgtccatgtttcatagg 2896060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 18190118 - 18190048
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| |||||||||| ||||||||||||||||||||||  ||||||| ||| ||||| || |||||||||    
T  18190118 tgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 637
Target Start/End: Original strand, 34371733 - 34371799
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    |||||||||||||||||||||| || | ||||||||||| ||| |||||| || |||||||||||||    
T  34371733 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtcc 34371799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 570 - 675
Target Start/End: Original strand, 6332689 - 6332794
Alignment:
Q  570 aaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtc 669  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||| ||||||  |  ||| || ||||  ||||| |||||||||| ||| ||  ||||||    
T  6332689 aaaaatcacataattcagtgtaattacaagtatcggtgtcgtgttggtgtcgaatgcgatacatgtctaacaccaggacatgcctgatccgatgagtgtc 6332788  T
Q  670 tgtgct 675  Q
    ||||||    
T  6332789 tgtgct 6332794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 538 - 627
Target Start/End: Complemental strand, 10572661 - 10572572
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg 627  Q
    |||||||||||||||||| | |||| |||| | ||||||||||||||| |||||| || | ||||||||||  ||| |||||||| ||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgttggtgtcaggcacg 10572572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 600 - 681
Target Start/End: Original strand, 17408740 - 17408821
Alignment:
Q  600 tgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||  ||| ||| |||||||||||||||||||||||||  || |  ||||||||||  ||||||||||||||||||    
T  17408740 tgtcggtgttgtgttggtatcagacacgacacgtgtccgacaccaagatacacctaatctgaagagtgtctgtgcttcatag 17408821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 534 - 606
Target Start/End: Complemental strand, 48040538 - 48040465
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaa-atcacataattcagtgtaactacaagtgtcggt 606  Q
    ||||||||||||||||||||||| ||||| |||| |||||  ||||||| || ||||||| |||||||||||||    
T  48040538 acggacactgacacgccgacacagataataatttgaaaaaggtcacatattttagtgtaaatacaagtgtcggt 48040465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 658
Target Start/End: Original strand, 12611935 - 12612073
Alignment:
Q  523 gaagcacaaatacggacactgacacgccg---acacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgt 619  Q
    ||||||| ||||| |||||||||||||||   ||||   || | |||| |||||||||||||||| |||||||  | | ||||| || || ||| |||||    
T  12611935 gaagcacgaatacagacactgacacgccgctgacactgttagtaatttgaaaaaatcacataattgagtgtaatcatatgtgtcagtatcgtgttggtgt 12612034  T
Q  620 cagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
     ||||||||| ||||||||| ||||| |||||| |||||    
T  12612035 tagacacgacgcgtgtccgataccggaacatgcttaatc 12612073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 611 - 679
Target Start/End: Complemental strand, 29163391 - 29163323
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||| ||||||||||||| | |||||||||||| | |||||| |||||||||  |||||||||    
T  29163391 tgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 36878447 - 36878519
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||   |||| |||| | |||||||||||||||||||||| || | |||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 51410043 - 51410083
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  51410043 aaaaaatcacataattcagtgtaattacaagtgtcggtgtc 51410083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 643
Target Start/End: Original strand, 52284731 - 52284794
Alignment:
Q  579 ataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacacc 643  Q
    |||||||||| ||| ||||||||||||||  || ||||||||||||||||||| |||||||||||    
T  52284731 ataattcagtataattacaagtgtcggtga-atatcggtgtcagacacgacacatgtccgacacc 52284794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 570 - 681
Target Start/End: Complemental strand, 15449272 - 15449170
Alignment:
Q  570 aaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtc 669  Q
    ||||||||||||||| ||||||| |||||||||| ||||| | |||||||| ||||||          ||||||| |||||||||||||  || ||||||    
T  15449272 aaaaatcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacacg---------tgacaccgagacatgcctaatccaaggagtgtc 15449182  T
Q  670 tgtgcttcatag 681  Q
    ||||||||||||    
T  15449181 tgtgcttcatag 15449170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 559 - 682
Target Start/End: Complemental strand, 16164366 - 16164243
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| |||||||||||||||| | ||||| || | |||||  |||| ||| |||||  ||| | |||||||||||||||| ||||| ||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatc 16164267  T
Q  659 tgagaagtgtctgtgcttcatagg 682  Q
     ||  ||||| |||| ||||||||    
T  16164266 cgaagagtgtatgtgtttcatagg 16164243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 534 - 589
Target Start/End: Original strand, 16812526 - 16812581
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtg 589  Q
    |||||||||||||| ||||||| |||||| |||| | |||||||||||||||||||    
T  16812526 acggacactgacacaccgacaccaataataatttgacaaaatcacataattcagtg 16812581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 538 - 681
Target Start/End: Complemental strand, 19562693 - 19562556
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    ||||||||||||||||||   |||| |||| | |||||| |||| |||||||||| || | |||| |||||||     ||||| || || ||||||||||    
T  19562693 acactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtca-----gtgtcggatacaacacgtgtcc 19562599  T
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| ||||||  ||||||| ||| |||||| |||||||||||    
T  19562598 gacacagggacacacctaatccgaggagtgtc-gtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 537 - 604
Target Start/End: Original strand, 30359374 - 30359441
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    ||||||||||| ||| ||||| | || |||| |||||||||||||||| ||||||||| |||||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcg 30359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 534 - 605
Target Start/End: Original strand, 31015026 - 31015097
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcgg 605  Q
    |||| ||||||| |||| |||||  |||| |||| | |||||||||||||||||||||| ||||||||||||    
T  31015026 acgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 534 - 608
Target Start/End: Original strand, 21378561 - 21378635
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgt 608  Q
    |||||||  ||||| ||||||||  |||| | || ||||||| |||||||||||||||| |||||||||||||||    
T  21378561 acggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 535 - 608
Target Start/End: Complemental strand, 32434792 - 32434718
Alignment:
Q  535 cggacactgacacg-ccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgt 608  Q
    |||||||||||||  ||||||||| |||| |||| ||||| |||||||||||| ||||| |||||||||| ||||    
T  32434792 cggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtctgtgt 32434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 684
Target Start/End: Complemental strand, 43492504 - 43492431
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcataggat 684  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||||| ||  ||  | |||||||||||||||    
T  43492504 tgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatccgaagagcatatgtgcttcataggat 43492431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 615 - 679
Target Start/End: Complemental strand, 16297287 - 16297223
Alignment:
Q  615 ggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||| ||||||||  |||||||||||| ||||| |||||||| ||| |||||| |||||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 616 - 676
Target Start/End: Original strand, 26830641 - 26830701
Alignment:
Q  616 gtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    ||||||||||| |||||||| ||| ||||||||| |||||||| ||| |||||| ||||||    
T  26830641 gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

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Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 682
Target Start/End: Complemental strand, 9690267 - 9690212
Alignment:
Q  627 gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||||||||||||||||| |||||||| |   ||||| |||||||||||||    
T  9690267 gacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcatagg 9690212  T

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Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 605
Target Start/End: Complemental strand, 10577811 - 10577740
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcgg 605  Q
    |||||||| ||||||||||||||  ||||| ||||| ||||||||| ||| |||||||| || | |||||||    
T  10577811 acggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgg 10577740  T

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Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 681
Target Start/End: Complemental strand, 27966011 - 27965940
Alignment:
Q  610 atgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| |||||||||||| | |||| | |||||||||||| |||||||| ||| ||||||  ||||||||||    
T  27966011 atgtccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

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Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 616
Target Start/End: Complemental strand, 35919317 - 35919270
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcgg 616  Q
    |||||||||||||||||||||||| || ||||||| ||||| ||||||    
T  35919317 aaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcgg 35919270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 676
Target Start/End: Original strand, 40181922 - 40181984
Alignment:
Q  613 tcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    |||||||| ||||| |||||||||| ||||||||||| |||||||| ||| |||| ||||||||    
T  40181922 tcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg-ctgtgctt 40181984  T

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Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 679
Target Start/End: Complemental strand, 42359438 - 42359391
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||||||||||| |||||||| ||| |||||| |||||||||    
T  42359438 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 658
Target Start/End: Original strand, 51410074 - 51410121
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||||||||| |||||||||||| |||||||||| |||| ||||||||    
T  51410074 tgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatc 51410121  T

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Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 2218297 - 2218347
Alignment:
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||  ||||| |||||||||||| |||||| |||||||||||    
T  2218297 cgtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

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Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 569 - 615
Target Start/End: Original strand, 8117052 - 8117098
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    |||||| ||||||||||||||||| ||||||| | ||||||||||||    
T  8117052 aaaaaaacacataattcagtgtaattacaagtattggtgtcatgtcg 8117098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 534 - 592
Target Start/End: Complemental strand, 12443536 - 12443478
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||| || ||||||||||||||  |||| |||| | ||||||||||||||||||||||    
T  12443536 acggatacggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaa 12443478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 537 - 603
Target Start/End: Complemental strand, 14359594 - 14359529
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtc 603  Q
    ||||| ||||||||||||||  |||| |||| ||||| |||||||||| ||||||| ||||||||||    
T  14359594 gacacggacacgccgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

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Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 635 - 681
Target Start/End: Original strand, 16812629 - 16812675
Alignment:
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| ||||||||| |||||||||||| |||||| |||||||||||    
T  16812629 tccgaaaccgggacacgcctaatctgaggagtgtccgtgcttcatag 16812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 541 - 619
Target Start/End: Original strand, 17754301 - 17754379
Alignment:
Q  541 ctgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgt 619  Q
    ||||||| |||||||   |||| |||| ||||||| ||||||||||||||||||| | ||||| ||||  |||||||||    
T  17754301 ctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgt 17754379  T

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Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 518
Target Start/End: Complemental strand, 19326939 - 19326909
Alignment:
Q  488 gtgtaggtcaactatctaattatgatacaac 518  Q
    |||||||||||||||||||||||||||||||    
T  19326939 gtgtaggtcaactatctaattatgatacaac 19326909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 534 - 592
Target Start/End: Original strand, 34298419 - 34298477
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||| |||||||| ||||||| | |||| |||| | ||||||||||||||||||||||    
T  34298419 acggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaa 34298477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 680
Target Start/End: Complemental strand, 5927350 - 5927281
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||| ||||| |||| ||||  ||||||||| ||  |||||||||||||||| |||||| ||||||||||    
T  5927350 tgtcagtgtcggacatgacaaatgtccgacatcgaaacatgcctaatctgaggagtgtccgtgcttcata 5927281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 538 - 602
Target Start/End: Complemental strand, 13011288 - 13011223
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaa-tcacataattcagtgtaactacaagtgt 602  Q
    ||||||||| |||||||||  |||| |||| |||||| |||||||||| ||||||| |||||||||    
T  13011288 acactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 595
Target Start/End: Complemental strand, 15641106 - 15641045
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaacta 595  Q
    ||||||||||||| ||||||||   |||| |||| | |||||||||| ||||||||||||||    
T  15641106 acggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaacta 15641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 18190159 - 18190114
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    |||| |||| ||||||| |||||||||||||||| |||||||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaattacaagtgtcg 18190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 606
Target Start/End: Original strand, 18471318 - 18471355
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggt 606  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  18471318 aaaaaatcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 538 - 591
Target Start/End: Complemental strand, 21366092 - 21366039
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgta 591  Q
    |||| ||||||||| ||||  |||| |||||||||||| |||||||||||||||    
T  21366092 acaccgacacgccggcacagctaataattttaaaaaataacataattcagtgta 21366039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 532 - 681
Target Start/End: Complemental strand, 15816207 - 15816058
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacac 631  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||| ||||||| || ||||||||||||| ||| |||||| ||||||||||    
T  15816207 atacggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacac 15816108  T
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |  ||||||||||||||| |||||||| |||||||||| |||||||||||    
T  15816107 gaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 22651959 - 22652106
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||||||||| | ||| |||||||||||||||| |||||||||| ||||||||| ||    
T  22651959 acggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgt 22652058  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||| | |||||| ||| |||||| |||||||||||    
T  22652059 gtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 534 - 682
Target Start/End: Complemental strand, 29510380 - 29510232
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| ||||||||||| |||||||| ||| |||||||||||||||  |||||||||| |||||||| |||    
T  29510380 acggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgt 29510281  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||||||||||  ||||||| ||| |||||| ||||||||||||    
T  29510280 gtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 29510232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 543 - 680
Target Start/End: Complemental strand, 29447177 - 29447040
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacac 642  Q
    |||||| |||||||| |||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||    
T  29447177 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacac 29447078  T
Q  643 cgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    | ||||| ||||||||  || |||||| ||||||||||    
T  29447077 caggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 537 - 682
Target Start/End: Complemental strand, 4673498 - 4673353
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||||||||||||||| ||||| |||| ||||||||| | |||||||||||| ||||||| || ||||| ||| | |||| |||||||| | | ||    
T  4673498 gacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtcttgttgatgtcggacacgacgcatatc 4673399  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||| ||| ||||||||  || |||||||||||||||||||    
T  4673398 cgacaccggaacacgcctaatccaaggagtgtctgtgcttcatagg 4673353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 537 - 682
Target Start/End: Original strand, 8343302 - 8343447
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||| ||||| |||||| |  |||| |||| |||||||||||||||| ||||||| |||||||||| ||||| |    ||||| |||||||||||||||    
T  8343302 gacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtc 8343401  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||||||| |||||||| ||  |||||||||||||||||||    
T  8343402 cgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 534 - 649
Target Start/End: Complemental strand, 2572132 - 2572017
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||| || |||||| |||||||  |||| |||| |||||||||||||||| ||||||| |||||||||||||||| |||| ||||| ||||||||||||    
T  2572132 acggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgt 2572033  T
Q  634 gtccgacaccgggaca 649  Q
    |||||| |||||||||    
T  2572032 gtccgataccgggaca 2572017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 36450830 - 36450694
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||| ||||||           ||| |||||| |||||||| |||    
T  36450830 acggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaag-----------tgtaggtgtcggacacgacgcgt 36450742  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  36450741 gtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 574 - 681
Target Start/End: Original strand, 29447467 - 29447574
Alignment:
Q  574 atcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtg 673  Q
    ||||||||||| ||||||| || | |||| |||||| |||||||||||||||||||| |||||||||||||||||| | |||||| ||| |||||| |||    
T  29447467 atcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtg 29447566  T
Q  674 cttcatag 681  Q
    ||||||||    
T  29447567 cttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 537 - 682
Target Start/End: Complemental strand, 22197815 - 22197670
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca-tgtcggtgtcagacacgacacgtgt 635  Q
    |||||| ||||||| |||||  |||| |||| ||||| |||||||||| ||||||| |||||||||| |||||| ||||| |||| |||| |||||||||    
T  22197815 gacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtcagtgtcg-tgtcggacatgacacgtgt 22197717  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||||  || |||||||||||| |||||| |||||| |||||    
T  22197716 ccgacaccggatcacgcctaatctgaggagtgtccgtgctttatagg 22197670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 559 - 681
Target Start/End: Original strand, 21465420 - 21465542
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| ||||||||| |||||||  ||||| ||||||||| |||||| |||| ||||| |||||||||||||||| |||| |||| | |||||||     
T  21465420 taataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatt 21465519  T
Q  659 tgagaagtgtctgtgcttcatag 681  Q
    |||| |||||| |||||||||||    
T  21465520 tgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 20873052 - 20873127
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||| | ||||| |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  20873052 acggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 20873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 26902214 - 26902104
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    |||||||||||||||||||||| || | ||||||||||| | |  ||||| ||||||||||||||| | ||| |||||| |||| ||||||| ||||||     
T  26902214 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtcc 26902115  T
Q  671 gtgcttcatag 681  Q
    |||||||||||    
T  26902114 gtgcttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 559 - 681
Target Start/End: Original strand, 28745506 - 28745628
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| ||||| |||||||||||| ||||||||||| ||||| |||| |||||||||| |||||||||| |||||| ||||| |||| | |||||     
T  28745506 taataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaatt 28745605  T
Q  659 tgagaagtgtctgtgcttcatag 681  Q
      || |||||| |||||||||||    
T  28745606 caaggagtgtccgtgcttcatag 28745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 532 - 682
Target Start/End: Original strand, 5813573 - 5813712
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacac 631  Q
    |||||||||| ||||||||||||||  |||| |||| ||||| ||||||| || ||||||| ||||||||||||||||            ||||||||||    
T  5813573 atacggacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcg-----------gacacgacac 5813661  T
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||||| |||||||  ||| |||||| ||||||| ||||    
T  5813662 gtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttcgtagg 5813712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 536 - 620
Target Start/End: Complemental strand, 13437038 - 13436954
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtc 620  Q
    |||||||||||||||||||||  |||| |||| ||||||||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  13437038 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtc 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 546 - 681
Target Start/End: Complemental strand, 11927150 - 11927015
Alignment:
Q  546 acgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgg 645  Q
    ||||||||||   |||| |||| | |||||||||||||||||||||| || | ||||||||||| ||| ||||||| |||||||| || ||| ||| ||     
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcga 11927051  T
Q  646 gacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||| |||||||| ||  |||||| |||||||||||    
T  11927050 gacacgcctaatccgatgagtgtccgtgcttcatag 11927015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 602
Target Start/End: Complemental strand, 41838201 - 41838131
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgt 602  Q
    ||||||||||||||||| |||||||  |||| |||| ||||||||||||||||||||| ||||||||||||    
T  41838201 atacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 41838131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 544 - 681
Target Start/End: Original strand, 11944658 - 11944795
Alignment:
Q  544 acacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacacc 643  Q
    ||||||||||||   |||| |||| | |||||||||||| ||||||||| || | ||||||||||| ||| | ||||| |||||||| || |||||||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacacc 11944757  T
Q  644 gggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    | |||| |||||||| ||  |||||  |||||||||||    
T  11944758 gagacacgcctaatccgatgagtgttcgtgcttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 569 - 681
Target Start/End: Original strand, 24858030 - 24858135
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||||||      |||||||| |||||| || |||||||| |||||||| ||| |||||    
T  24858030 aaaaaatcacataattcagtgtaa-tacaagtgtcgttgtcgtgtcgg------acacgacatgtgtcccacgccgggacacgcctaatcagaggagtgt 24858122  T
Q  669 ctgtgcttcatag 681  Q
     ||||||||||||    
T  24858123 ttgtgcttcatag 24858135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 18170558 - 18170483
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| |||  |||| ||||||| |||||||||| ||||| ||||| ||||||||||    
T  18170558 acggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 18634126 - 18634051
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| |||  |||| ||||||| |||||||||| ||||| ||||| ||||||||||    
T  18634126 acggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18634051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 22595981 - 22596052
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||  |||| |||| ||||||| |||||||||||||||| ||||||||| ||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtc 22596052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 535 - 614
Target Start/End: Complemental strand, 30271366 - 30271287
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||||||||||||||||  |||| |||| ||||||||||||||| |||||||| |||||||| | ||||| ||||    
T  30271366 cggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcgtgtc 30271287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 538 - 604
Target Start/End: Complemental strand, 41832012 - 41831946
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    |||| |||| |||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||    
T  41832012 acacagacatgccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 41831946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 559 - 620
Target Start/End: Original strand, 25566849 - 25566910
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtc 620  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  25566849 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 611 - 679
Target Start/End: Complemental strand, 926798 - 926730
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||| ||| ||||||||||||||||||||||||||| | ||| ||| |||||| |||||||||    
T  926798 tgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 4786411 - 4786339
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||| | |||| |||| | |||||||||||||||||||||| || | |||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtc 4786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 537 - 681
Target Start/End: Original strand, 18964163 - 18964309
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg--gtgtcatgtcggtgtcagacacgacacgtg 634  Q
    |||||||||||| | | |||| ||||| ||||| |||||||||||||||| ||||| || | ||||||  ||||| |||||| ||   ||||||||| ||    
T  18964163 gacactgacacgtcaagacaactaatttttttagaaaatcacataattcaatgtaattatatgtgtcggtgtgtcgtgtcggcgttgaacacgacacctg 18964262  T
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||  |||| | |||| |||| ||| ||| ||||||||||||||||||    
T  18964263 tctaacacggagacacgccttatccgaggagtgtctgtgcttcatag 18964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 678
Target Start/End: Complemental strand, 24727826 - 24727684
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaa--tcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    ||||||||||| | |||||| |||| |||| ||||||  | ||||||| |||||||| | |||||||  ||||||||||||| ||  ||| |||||||||    
T  24727826 acactgacacgtcaacacaactaataatttgaaaaaaaattacataatgcagtgtaatttcaagtgttagtgtcatgtcggtatcgaacatgacacgtgt 24727727  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttca 678  Q
    || | ||| | ||| |||||||| |||||||||  ||||||||    
T  24727726 ccaataccagaacacgcctaatccgagaagtgttcgtgcttca 24727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 607
Target Start/End: Complemental strand, 25192425 - 25192350
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtg 607  Q
    |||||||||||||||||||||||||  |||| |||| ||||| | |||||||||||| ||| || |||||||||||    
T  25192425 atacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 681
Target Start/End: Complemental strand, 27067360 - 27067231
Alignment:
Q  548 gccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccggga 647  Q
    |||||||| | |||| |||| | ||||| |||||||||  ||||| |||||||||| ||||| |||||||||| ||||||||| |||||  ||||||| |    
T  27067360 gccgacaccactaatgatttgagaaaattacataattc--tgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtgtcgaacaccggaa 27067263  T
Q  648 catgcctaatctgagaagtgtctgtgcttcatag 681  Q
    | |  |||||| ||| |||||| |||||||||||    
T  27067262 cgt--ctaatccgaggagtgtccgtgcttcatag 27067231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 539 - 610
Target Start/End: Original strand, 31556985 - 31557055
Alignment:
Q  539 cactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    ||||||||||||||||||  |||| |||| |||| ||||||||||||||||||| ||||||| |||||||||    
T  31556985 cactgacacgccgacacagttaataatttgaaaa-atcacataattcagtgtaattacaagtttcggtgtca 31557055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 610
Target Start/End: Complemental strand, 4298952 - 4298886
Alignment:
Q  544 acacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||||||||  |||| |||| |||||||||||||||| | ||||| |||||||||||||||||    
T  4298952 acacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtca 4298886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 4948660 - 4948710
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  4948660 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 4948710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 681
Target Start/End: Original strand, 11803279 - 11803389
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    |||||||||||||||||||||| || | |||| |||||  ||| |||||  || ||||||| |||||||||| || ||| | |||||| ||| ||||||     
T  11803279 aaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtcc 11803378  T
Q  671 gtgcttcatag 681  Q
    |||||||||||    
T  11803379 gtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 661
Target Start/End: Complemental strand, 12570547 - 12570458
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctga 661  Q
    |||| ||||||||| ||||||| || | |||||| |||  | |||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  12570547 aaaaacacataattaagtgtaattatatgtgtcgatgtg-tatcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctga 12570458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 534 - 627
Target Start/End: Complemental strand, 28385070 - 28384977
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg 627  Q
    |||||||||||||  |||||||   |||| || | || ||||| ||||||||||||||| || | |||||||||||||||| ||||||||||||    
T  28385070 acggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacg 28384977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 613 - 661
Target Start/End: Complemental strand, 12570732 - 12570684
Alignment:
Q  613 tcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctga 661  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  12570732 tcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctga 12570684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 620
Target Start/End: Original strand, 14692441 - 14692528
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtc 620  Q
    |||||||||||||||| | |||||| ||||| |||| | ||| | ||||||||||||||||||| | |||||||| ||||||| |||||    
T  14692441 atacggacactgacactctgacacagataataatttgagaaa-tgacataattcagtgtaactataggtgtcggtatcatgtctgtgtc 14692528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 610
Target Start/End: Original strand, 22204620 - 22204700
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaa-at-cacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||||||||||||||||||||| |||| |||| ||||| ||  | |||||||||||||| |||||||||| ||||||    
T  22204620 atacggacactgacacgccgacacaactaataatttaaaaaatatatatataattcagtgtaattacaagtgtcagtgtca 22204700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 644
Target Start/End: Complemental strand, 24362275 - 24362167
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgt-cagacacgacacgtgt 635  Q
    ||||| |||||||||||||   |||| |||| | | |||||||||||||||||||| || | |||||  |||| ||||||||| | ||||||||||||||    
T  24362275 gacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgacacgtgt 24362176  T
Q  636 ccgacaccg 644  Q
    ||| |||||    
T  24362175 ccggcaccg 24362167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 34451113 - 34450961
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcgg-----tgtcatgtcggtgtcagacacga 628  Q
    |||| ||| ||||| | ||||||  ||||| ||||  ||||||||| ||| |||||||| || | |||||||     |||| |||||||||| |||||||    
T  34451113 acgggcaccgacacactgacacagctaattttttttgaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgtgtcggtgtcggacacga 34451014  T
Q  629 cacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||| ||||| |||||| |||| |||  || |||||| |||||||||||    
T  34451013 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 679
Target Start/End: Original strand, 44067502 - 44067644
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc-atgtcggtgtcagacac-gacacgtg 634  Q
    |||||||||||||||||||  ||||| |||| | ||||| ||||||| |||||||| || ||||||| |||||  |||| ||||| ||||| ||  ||||    
T  44067502 gacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc-gtgtcggtgtc-gtgtcggacactgatgcgtg 44067599  T
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||||||||| ||||| |||||||  ||| |||||| |||||||||    
T  44067600 tccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 610 - 681
Target Start/End: Original strand, 14134747 - 14134818
Alignment:
Q  610 atgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||| |||||||||||||||| |||| ||||| |||||||  ||| |||||| ||| |||||||    
T  14134747 atgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatag 14134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 537 - 604
Target Start/End: Original strand, 18407705 - 18407772
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    ||||| |||| |||||||||  |||| |||  |||||||||||||||||||||||| |||||||||||    
T  18407705 gacacagacatgccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 622 - 669
Target Start/End: Complemental strand, 22943348 - 22943301
Alignment:
Q  622 gacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtc 669  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  22943348 gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 609
Target Start/End: Original strand, 34897052 - 34897143
Alignment:
Q  518 cctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||| | |||||||| |||||| ||||||   |||| |||| | |||||||||||||||||||||| || | |||||| ||||    
T  34897052 cctatgaagcacataaacggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 34897143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 3951546 - 3951476
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||||||||||||| ||||| || ||| ||||||||  || ||| || |||||||||||    
T  3951546 tgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 8342980 - 8343030
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 8343030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 682
Target Start/End: Original strand, 8343037 - 8343087
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||||| |||||||| ||  |||||||||||||||||||    
T  8343037 gtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 609
Target Start/End: Original strand, 24613509 - 24613578
Alignment:
Q  539 cactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||| ||||||||  |||| |||| |||| ||||||||||| ||||||| ||||||||||||||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaa-atcacataattaagtgtaattacaagtgtcggtgtc 24613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 616 - 681
Target Start/End: Complemental strand, 16641974 - 16641909
Alignment:
Q  616 gtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| ||||||||| |||||  |||||||||||  ||||||| ||| ||||||||||||||||||    
T  16641974 gtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 30077461 - 30077388
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||| |||||||| || ||  |||| |||| |||| ||||||||||||||||||| |||||||||| |||||    
T  30077461 ggacacggacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtc 30077388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 613 - 658
Target Start/End: Original strand, 31557047 - 31557092
Alignment:
Q  613 tcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  31557047 tcggtgtcagacacgacacatgtccgacaccaggacacgcctaatc 31557092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 40332211 - 40332248
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgt 608  Q
    |||||||||||||||||||||| |||||||||||||||    
T  40332211 aaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 624 - 676
Target Start/End: Complemental strand, 14639787 - 14639735
Alignment:
Q  624 cacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    |||||||| ||||||||||||||||||||||||||  || ||| |||||||||    
T  14639787 cacgacacatgtccgacaccgggacatgcctaatccaaggagtatctgtgctt 14639735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 611 - 679
Target Start/End: Complemental strand, 20679405 - 20679337
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||||||| | |||||||||||||||||||||| |||| | | ||| ||||||  ||||||||    
T  20679405 tgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 24669419 - 24669491
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||| |||||   |||| |||| |  |||| |||||||||||||||| ||||||||||||||||    
T  24669419 gacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtc 24669491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 585
Target Start/End: Original strand, 3677769 - 3677820
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattc 585  Q
    ||||| ||||||||  |||||||| |||| ||||||||||||||||||||||    
T  3677769 acggatactgacacatcgacacaattaataattttaaaaaatcacataattc 3677820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 579
Target Start/End: Complemental strand, 24196675 - 24196628
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcaca 579  Q
    |||||||||| ||||||||||||||| |||| |||| |||||||||||    
T  24196675 atacggacaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Original strand, 31514891 - 31514930
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgt 608  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  31514891 aaaaaatcacataattcagcgtaactacaagtgttggtgt 31514930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 681
Target Start/End: Original strand, 39820493 - 39820547
Alignment:
Q  626 cgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||| |||||||||||| |||||| |||||||| |||||||||| |||||||||||    
T  39820493 cgacgcgtgtccgacac-gggacacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 658
Target Start/End: Complemental strand, 44462205 - 44462158
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||||||||||||||||| || ||||||||||||||||| | ||||||    
T  44462205 tgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatc 44462158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 658
Target Start/End: Complemental strand, 44469738 - 44469691
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||||||||||||||||| || ||||||||||||||||| | ||||||    
T  44469738 tgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatc 44469691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 518
Target Start/End: Complemental strand, 19177486 - 19177456
Alignment:
Q  488 gtgtaggtcaactatctaattatgatacaac 518  Q
    |||||||||||||||||||||||||||||||    
T  19177486 gtgtaggtcaactatctaattatgatacaac 19177456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 532 - 610
Target Start/End: Complemental strand, 20679473 - 20679395
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||| |||||||||| | ||||||   |||| |||| | ||||||||||| |||||||||| || ||||||||||||||    
T  20679473 atacagacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtca 20679395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 24413569 - 24413499
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||| ||||| |||||||  ||||||| ||| ||||||| | |||||| |||||||||| |||||||||||    
T  24413569 tgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcatag 24413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 632 - 682
Target Start/End: Original strand, 27213595 - 27213645
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||| |||||||||||| | |||||| |||||||||| ||||||||||||    
T  27213595 gtgtcggacaccgggacacggctaatccgagaagtgtccgtgcttcatagg 27213645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 518
Target Start/End: Original strand, 44206254 - 44206284
Alignment:
Q  488 gtgtaggtcaactatctaattatgatacaac 518  Q
    |||||||||||||||||||||||||||||||    
T  44206254 gtgtaggtcaactatctaattatgatacaac 44206284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 680
Target Start/End: Original strand, 2035759 - 2035866
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    ||||| |||| ||||||||||| || | |||||| | || || ||||||||||| |||| ||||||||||||||||| |  ||||||| ||| || |||     
T  2035759 aaaataacattattcagtgtaattataggtgtcg-tatcgtgccggtgtcagac-cgacgcgtgtccgacaccgggagacacctaatccgagtagcgtcc 2035856  T
Q  671 gtgcttcata 680  Q
    ||||||||||    
T  2035857 gtgcttcata 2035866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 683
Target Start/End: Complemental strand, 38487212 - 38487155
Alignment:
Q  626 cgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagga 683  Q
    |||| ||||||||||||| |||||  | ||||| ||| ||||||||||||||||||||    
T  38487212 cgacgcgtgtccgacacccggacacacataatccgaggagtgtctgtgcttcatagga 38487155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 1e-43; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 519 - 681
Target Start/End: Original strand, 39698509 - 39698671
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtg 618  Q
    |||||||||||  |||||||||||||||||| ||||||  |||| |||| |||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  39698509 ctatgaagcacggatacggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtg 39698608  T
Q  619 tcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || ||||||||| || |||||||||| |||| |||||||| ||| |||||| |||||||||||    
T  39698609 tcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 534 - 658
Target Start/End: Original strand, 21522733 - 21522857
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||    
T  21522733 acggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgt 21522832  T
Q  634 gtccgacaccgggacatgcctaatc 658  Q
    ||||| |||||||||| ||||||||    
T  21522833 gtccggcaccgggacacgcctaatc 21522857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 534 - 658
Target Start/End: Original strand, 21533299 - 21533423
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||    
T  21533299 acggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgt 21533398  T
Q  634 gtccgacaccgggacatgcctaatc 658  Q
    ||||| |||||||||| ||||||||    
T  21533399 gtccggcaccgggacacgcctaatc 21533423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 531 - 677
Target Start/End: Original strand, 30183529 - 30183675
Alignment:
Q  531 aatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgaca 630  Q
    ||||| |||||||| | |||||||||| |||| |||| |||| ||||||| |||| || ||| |||||||||||||||| ||| ||| ||||||||||||    
T  30183529 aatacagacactgatatgccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgttggtatcagacacgaca 30183628  T
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttc 677  Q
    |||||||||||| |||||| |||||||  ||||||||||||||||||    
T  30183629 cgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 537 - 658
Target Start/End: Original strand, 21542016 - 21542137
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||| ||||| |||||||||| |||| |||| |||| || |||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  21542016 gacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 21542115  T
Q  637 cgacaccgggacatgcctaatc 658  Q
    ||||||||||||| ||| ||||    
T  21542116 cgacaccgggacacgccgaatc 21542137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 537 - 681
Target Start/End: Original strand, 31084309 - 31084447
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||||  |||| |||| |||||||||||||||||| ||||| ||||||||||| ||||      ||||| |||||||||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtc------gtgtcggacacgacacgtgtc 31084402  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||| ||||||||||||||| ||| |||||| ||| |||||||    
T  31084403 cgacactgggacatgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 549 - 681
Target Start/End: Original strand, 7677703 - 7677835
Alignment:
Q  549 ccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggac 648  Q
    ||||||||  |||| |||| ||||||||||||||||||||| || || ||||||||||||| |||||||||| |||||| ||| ||||||||||||||||    
T  7677703 ccgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggac 7677802  T
Q  649 atgcctaatctgagaagtgtctgtgcttcatag 681  Q
    | |||||||| ||| || ||| |||||||||||    
T  7677803 acgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 534 - 682
Target Start/End: Complemental strand, 36642838 - 36642691
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| ||||| | ||||| || ||||||| || ||||||||||||||||| |||||| ||||||||||||    
T  36642838 acggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgttggtgtcggacacgacacgt 36642739  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||| ||||||| |||||||  ||| |||||| ||||||| ||||    
T  36642738 gtccgaca-cgggacacgcctaattggaggagtgtcggtgcttcgtagg 36642691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 534 - 680
Target Start/End: Original strand, 6401481 - 6401627
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||| ||||||||||||||| ||| | ||||| ||||||||| ||| |||||||| || | ||||||||||| |||| ||||| ||||||||||||    
T  6401481 acggacaccgacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgt 6401580  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    ||| ||||| |||| | |||| |||  || |||||| ||||||||||    
T  6401581 gtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 534 - 668
Target Start/End: Original strand, 19579684 - 19579818
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||| |||||||||||  |||| |||| | |||||||||||||| |||| || |||||||||||||||| |||| ||||| |||||||||  |    
T  19579684 acggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatat 19579783  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||  ||||||||||| |||||||| ||| |||||    
T  19579784 gtctaacaccgggacacgcctaatccgaggagtgt 19579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 536 - 626
Target Start/End: Complemental strand, 21351979 - 21351889
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac 626  Q
    |||||||||||| ||||||||| |||| |||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac 21351889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 534 - 614
Target Start/End: Complemental strand, 13287475 - 13287395
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||| ||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13287475 acggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtc 13287395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 21191132 - 21190998
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||| |||||||||  |||| |||| |||||||||||||||||||||||| ||||||||||||           |||| ||||| ||||||    
T  21191132 acggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg-----------tgtcggacacaacacgt 21191044  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||||||| |||||||| |||||||| ||| |||||| |||||||||    
T  21191043 gtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 532 - 609
Target Start/End: Original strand, 6247603 - 6247680
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||| |||||||||||||||||||  |||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  6247603 atacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 6247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 519 - 681
Target Start/End: Original strand, 42893328 - 42893479
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtg 618  Q
    |||||||||||  ||| |||||| ||||| ||||||||  |||| |||| ||||||||||||||| |||||||| ||||||           ||||||||    
T  42893328 ctatgaagcacggatatggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaag-----------tgtcggtg 42893416  T
Q  619 tcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||| ||||||  ||||||||||    
T  42893417 tcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 543 - 654
Target Start/End: Original strand, 21814253 - 21814364
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacac 642  Q
    ||||||||||||||  ||||| ||||| ||||||||| ||| |||||||| || | ||||||||||| |||||||||| ||||||||||||||| | |||    
T  21814253 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcac 21814352  T
Q  643 cgggacatgcct 654  Q
     |||||| ||||    
T  21814353 ggggacacgcct 21814364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 534 - 669
Target Start/End: Original strand, 15382460 - 15382592
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaa--tcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacac 631  Q
    ||||||| |||||||||||||||  |||| |||| ||||||  ||| |||||||||| ||| ||||||||||||||||     |||||  ||||||||||    
T  15382460 acggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtc-----ggtgttggacacgacac 15382554  T
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtc 669  Q
     ||||||||||||||||| |||||||| ||| ||||||    
T  15382555 atgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 540 - 609
Target Start/End: Original strand, 33178014 - 33178083
Alignment:
Q  540 actgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||| |||| |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 33178083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 682
Target Start/End: Complemental strand, 37328920 - 37328774
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||| || ||||||||   ||| ||||  |||||||||| |||||||||||| |||| ||||||||||| |||||||||| ||||||  | |     
T  37328920 acggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacg--atgc 37328823  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||| ||||||| | || ||||| ||| |||||| ||||||||||||    
T  37328822 gtccgataccgggatacgcttaatccgaggagtgtccgtgcttcatagg 37328774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 536 - 680
Target Start/End: Original strand, 3966488 - 3966632
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    ||||||||||| ||||||||   |||| |||| | ||||||||| |||||||||||| || | ||||||||||| |||| ||||| ||||| ||| ||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgt 3966587  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    || |||  |||||| | |||||| ||| |||||| ||||||||||    
T  3966588 ccaacagagggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 625
Target Start/End: Complemental strand, 19552619 - 19552530
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagaca 625  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||||||| ||||||  || |||||||| |||| |||||||||||||||    
T  19552619 acggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta--tataagtgtcgatgtcgtgtcggtgtcagaca 19552530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 681
Target Start/End: Complemental strand, 21576817 - 21576685
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    ||||||| ||||| |||||  |||| |||| |||||||||||||||||||||||| |||||||||||     ||||||      |||||||||||||||     
T  21576817 acactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg-----atgtcg------gacacgacacgtgtct 21576729  T
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| |||||| |||||||| ||| |||||| |||||||||||    
T  21576728 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 605
Target Start/End: Original strand, 14674252 - 14674323
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcgg 605  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||||||| ||||||| ||||||||||||    
T  14674252 acggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 611 - 682
Target Start/End: Original strand, 43564930 - 43565001
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||| ||||||||| ||||||||| |||||||| |||||||| |||||||||| ||||||||||||    
T  43564930 tgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatagg 43565001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 679
Target Start/End: Original strand, 43001783 - 43001922
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||| | ||||||   |||| |||| ||||||| |||||||||||||||| ||||||||| ||||  ||    ||||| ||||||||||||    
T  43001783 acggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtg--at----gtgtcggacacgacacgt 43001876  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||  ||||| ||||| |||||||| ||| |||||| |||||||||    
T  43001877 gtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 521 - 609
Target Start/End: Original strand, 10298539 - 10298627
Alignment:
Q  521 atgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||  || |||||||| |||||||||||||| |||| |||| ||||| ||||||||| || ||||| ||||||||||||||||    
T  10298539 atgaagcacggatgcggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtc 10298627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 606
Target Start/End: Complemental strand, 24906373 - 24906305
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggt 606  Q
    ||||||||||||| ||||| ||||| |||| ||||||| |||||||||||||||| |||||||||||||    
T  24906373 acactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 531 - 642
Target Start/End: Original strand, 12641654 - 12641765
Alignment:
Q  531 aatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgaca 630  Q
    |||||||||| ||||||| ||||| |  |||| |||| |||||||||||||||| ||| ||| | || ||||| ||||| ||| |||||||||||| |||    
T  12641654 aatacggacaatgacacgtcgacatagttaataatttaaaaaaatcacataatttagtataattgcacgtgtcagtgtcgtgttggtgtcagacacaaca 12641753  T
Q  631 cgtgtccgacac 642  Q
    ||||| ||||||    
T  12641754 cgtgttcgacac 12641765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 535 - 681
Target Start/End: Original strand, 30098310 - 30098456
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtg 634  Q
    |||||||||||||| ||| ||   |||| |||| | |||||||||||||||| ||||| || |  ||||||| ||  ||| ||||| |||||||||||||    
T  30098310 cggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtg 30098409  T
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || |||||| |||||  ||||||| ||| | |||| |||||||||||    
T  30098410 tcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 683
Target Start/End: Original strand, 14873537 - 14873643
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    |||| ||||||||| ||||||| || | ||||||||||||||||||      || | |||||||||| ||||||||||| |||||||| ||| ||||||     
T  14873537 aaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcgg------acgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtcc 14873630  T
Q  671 gtgcttcatagga 683  Q
    |||||||||||||    
T  14873631 gtgcttcatagga 14873643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 543 - 614
Target Start/End: Original strand, 30135305 - 30135377
Alignment:
Q  543 gacacgccgacacaaataattattttaaaa-aatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||||||||| |||| |||| |||| |||||||||| ||| ||||| |||||||||||||||||||||    
T  30135305 gacacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtcatgtc 30135377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 537 - 628
Target Start/End: Original strand, 41995457 - 41995546
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacga 628  Q
    ||||||||||||||||||||| |||| |||  |||||||||||||||||| ||||| |  ||||||||||| | | |||||||| |||||||    
T  41995457 gacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatt--aagtgtcggtgccgtatcggtgtcggacacga 41995546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 609
Target Start/End: Original strand, 8420011 - 8420085
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||| ||||||||||||| |  |||| |||| ||||||| |||||||||| ||||| ||||||||||||||||    
T  8420011 cggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtc 8420085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 32766982 - 32766872
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    |||||| || |||||| ||||| || | ||||  ||||| ||||||||||  | ||||||||||||||||||| ||| | | |||||||||| ||||||     
T  32766982 aaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtcc 32766883  T
Q  671 gtgcttcatag 681  Q
    |||||||||||    
T  32766882 gtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 534 - 595
Target Start/End: Original strand, 9449452 - 9449513
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaacta 595  Q
    |||||||||| ||||||||||| |||||| |||| | |||||||||||||||| ||||||||    
T  9449452 acggacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgtaacta 9449513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 537 - 682
Target Start/End: Original strand, 11685925 - 11686069
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||||| ||||||||   |||| |||| | ||| || ||||||| ||||||| || | ||||||||||| | |||||||| |||||||||||||||    
T  11685925 gacactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtc 11686023  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    | | |||  | || | |||||| ||| |||||| ||||||||||||    
T  11686024 caaaaccaaggcacggctaatcggaggagtgtccgtgcttcatagg 11686069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 15884006 - 15884046
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  15884006 aaaaaatcacataattcagtgtaattacaagtgtcggtgtc 15884046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 615 - 683
Target Start/End: Original strand, 27932288 - 27932356
Alignment:
Q  615 ggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagga 683  Q
    |||||| ||||||||||||||| |||||| ||||| |||||||  ||| ||||| ||||||||||||||    
T  27932288 ggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatagga 27932356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 4105240 - 4105310
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaa--tcacataattcagtgtaactacaagtgt 602  Q
    ||||| ||||||||||||||| || |||| |||| ||||||  |||||||||||||||||| |||||||||    
T  4105240 acggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 611 - 658
Target Start/End: Complemental strand, 30502398 - 30502351
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||    
T  30502398 tgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatc 30502351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 611 - 658
Target Start/End: Complemental strand, 30542741 - 30542694
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||||    
T  30542741 tgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatc 30542694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 611 - 678
Target Start/End: Complemental strand, 39268608 - 39268541
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttca 678  Q
    |||||||||  ||||||||| ||||||||||| |||||| |||||||| ||| |||||| ||||||||    
T  39268608 tgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 540 - 619
Target Start/End: Original strand, 41633724 - 41633803
Alignment:
Q  540 actgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgt 619  Q
    |||||||| ||||||||  |||| |||| ||||| | |||||||||||||||| ||||| |||||||||| | |||||||    
T  41633724 actgacactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgtatcggtgt 41633803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 616
Target Start/End: Complemental strand, 5894892 - 5894827
Alignment:
Q  551 gacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcgg 616  Q
    ||||||| |||| |||| ||||||||| |||||| | | |||||||||||||||||||| ||||||    
T  5894892 gacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtcgg 5894827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 591
Target Start/End: Original strand, 6770526 - 6770583
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgta 591  Q
    |||||||||||||| | ||||||| |||| |||| | |||||||||||||||||||||    
T  6770526 acggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgta 6770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 535 - 608
Target Start/End: Complemental strand, 17177098 - 17177025
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgt 608  Q
    |||||||||| ||||| |||||  |||| |||| ||||||||| | |||||| ||||| |||||||||||||||    
T  17177098 cggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcggtgt 17177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 682
Target Start/End: Complemental strand, 38464361 - 38464312
Alignment:
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatagg 38464312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 683
Target Start/End: Original strand, 40131624 - 40131753
Alignment:
Q  554 acaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcc 653  Q
    |||| |||| |||| |||||||||||||||||||| ||| || || | |||||||| | ||| |||||||||||||  ||||| ||||  |||||| | |    
T  40131624 acaactaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgtatcgatgtcagacacgacttgtgtctgacattgggacacgtc 40131723  T
Q  654 taatctgagaagtgtctgtgcttcatagga 683  Q
    || ||  || |||||| ||| |||||||||    
T  40131724 tactccaaggagtgtccgtgtttcatagga 40131753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 633 - 681
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 7218318 - 7218271
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggt 606  Q
    |||| |||| || ||||||||||||||||||||| |||||||||||||    
T  7218318 taataatttaaataaatcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 681
Target Start/End: Original strand, 17123096 - 17123166
Alignment:
Q  610 atgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||  ||||||| || |||||||||| |||||| |||||||| ||| |||||| |||||||||||    
T  17123096 atgtcggtgttggacacgaaacatgtccgacac-gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 628
Target Start/End: Complemental strand, 21319986 - 21319927
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacga 628  Q
    ||||||| | |||||||| |||||  |||||||||| ||||||||||||||| |||||||    
T  21319986 aaaaaatgatataattcaatgtaatcacaagtgtcgatgtcatgtcggtgtcggacacga 21319927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 609
Target Start/End: Complemental strand, 28588742 - 28588675
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||   |||| |||| | |||||||||||||||||||||| || | |||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 28588675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 605 - 675
Target Start/End: Original strand, 15588632 - 15588707
Alignment:
Q  605 gtgtcatgtcggtgtca--gacacgacacgtgtccgacacc---gggacatgcctaatctgagaagtgtctgtgct 675  Q
    |||||||||||||||||  ||||||| |||| |||||||||   |||||| |||||||||||||||| | ||||||    
T  15588632 gtgtcatgtcggtgtcaaagacacgatacgtatccgacaccaccgggacacgcctaatctgagaagtatatgtgct 15588707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 534 - 592
Target Start/End: Original strand, 22013397 - 22013455
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    |||||||||||||||||||||||  |||| ||||  |||||| |||||||| |||||||    
T  22013397 acggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaa 22013455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 543 - 609
Target Start/End: Complemental strand, 30099105 - 30099039
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||| ||| | ||||||| |||| |||||||| |||||| || | |||||||||||    
T  30099105 gacacgccgacacaactaaattttttaaacaatcgcataattctgtgtaattatatgtgtcggtgtc 30099039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 41091296 - 41091186
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    |||||||||||||||||||||| || | |||||| |||| ||||  |||| ||| ||||| |||||  |||||  | || | |||||||||| |||||      
T  41091296 aaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcggacgcgacatgtgtctaacaccaaggcacgtctaatctgaggagtgttc 41091197  T
Q  671 gtgcttcatag 681  Q
    |||||||||||    
T  41091196 gtgcttcatag 41091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 584
Target Start/End: Complemental strand, 6072392 - 6072339
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaa-aatcacataatt 584  Q
    ||||||| ||||||||||||||| || |||| ||||||||| ||||||||||||    
T  6072392 atacggatactgacacgccgacataactaataattttaaaacaatcacataatt 6072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 618
Target Start/End: Original strand, 12199948 - 12199997
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtg 618  Q
    ||||||||||||||||||||  || |||||||||||||||| ||| ||||    
T  12199948 aaaaaatcacataattcagtacaattacaagtgtcggtgtcgtgttggtg 12199997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 679
Target Start/End: Complemental strand, 24238660 - 24238603
Alignment:
Q  622 gacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||||||||| |||| ||||||||| |||||  || |||||| |||||||||    
T  24238660 gacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 5e-43; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 536 - 681
Target Start/End: Original strand, 24339627 - 24339772
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    ||||| |||||||||||||||  |||| |||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||| |    
T  24339627 ggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtat 24339726  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||| |||||||| ||| |||| | |||||||||||    
T  24339727 ccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 538 - 682
Target Start/End: Original strand, 7438693 - 7438837
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    ||||||||| |||||||||  |||| |||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||| |    
T  7438693 acactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgc 7438792  T
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||  ||||| |||||||   || |||||| ||||||||||||    
T  7438793 gacactaggacacgcctaattcaaggagtgtccgtgcttcatagg 7438837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 43027545 - 43027404
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||||| |||| ||  |||| |||| ||||||||||||||| |||||||| ||||||||||||||||      ||||||||||||||||||    
T  43027545 acggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtc------gtgtcagacacgacacgt 43027452  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||| |||||||| ||  |||||| |||||||||||    
T  43027451 gtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 536 - 682
Target Start/End: Complemental strand, 5409910 - 5409770
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    |||||||||||||| || |||  |||| |||| ||||||||||||||||||||| || |||||||||||||||| ||||||      |||||||||||||    
T  5409910 ggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcgg------acacgacacgtgt 5409817  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||| |||||||| ||| |||||| ||||||||||||    
T  5409816 ccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 5409770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 543 - 681
Target Start/End: Original strand, 25822647 - 25822785
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacac 642  Q
    ||||||||||||||| |||| |||| ||||||   || |||||||||||| |||||||||||||||| | ||||| || ||||||||||||||| ||||     
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacat 25822746  T
Q  643 cgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||||| || |||||| ||| |||||||    
T  25822747 cgggacatgcctaatctaaggagtgtccgtgtttcatag 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 559 - 679
Target Start/End: Complemental strand, 26033512 - 26033392
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||| |||| ||||  |||||||    
T  26033512 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatc 26033413  T
Q  659 tgagaagtgtctgtgcttcat 679  Q
     ||| |||||| ||| |||||    
T  26033412 cgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 542 - 644
Target Start/End: Complemental strand, 11665508 - 11665406
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgaca 641  Q
    |||||||| ||||||| |||| |||| |||||||||||||||||||| ||| || |||||||| |||||||||||||||  |||||||||||||||||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgaca 11665409  T
Q  642 ccg 644  Q
    |||    
T  11665408 ccg 11665406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 537 - 628
Target Start/End: Complemental strand, 9408407 - 9408316
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacga 628  Q
    ||||||||||| ||||||||| |||| |||| |||||||||||||||| ||||||| |||||||||||||||| | ||||||||||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacga 9408316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 598257 - 598327
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||    
T  598257 tgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 9778513 - 9778625
Alignment:
Q  564 attttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgaga 663  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||| ||||||      |||| |||||||||||||||||||||| ||||||||  ||     
T  9778513 atttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcgg------acacaacacgtgtccgacaccgggacacgcctaatccaagg 9778606  T
Q  664 agtgtctgtgcttcatagg 682  Q
    |||||| ||||||||||||    
T  9778607 agtgtccgtgcttcatagg 9778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 534 - 676
Target Start/End: Original strand, 13770674 - 13770810
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||| |||||||||||  |||| |||| ||||||| |||||||||||||||| ||||||||||| ||||      ||||| ||||| ||||||    
T  13770674 acggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtc------gtgtcggacacaacacgt 13770767  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    |||||||||||| ||| |||||||| ||  |||||| ||||||    
T  13770768 gtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 516 - 649
Target Start/End: Original strand, 32308079 - 32308218
Alignment:
Q  516 aacctatgaagcacaaatacg------gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||      |||||||||||||||||||   |||| |||| | |||||||||||||||||||||| |  | ||||| |||||    
T  32308079 aacctatgaagcacaaatacgaacatggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtc 32308178  T
Q  610 atgtcggtgtcagacacgacacgtgtccgacaccgggaca 649  Q
     |||||||||  |||||||||| |||||||||||| ||||    
T  32308179 gtgtcggtgttggacacgacacatgtccgacaccgagaca 32308218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 569 - 681
Target Start/End: Complemental strand, 32094061 - 32093954
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacacc-gggacatgcctaatctgagaagtg 667  Q
    |||||||||||||||||||||||| ||||| ||||||||||      ||||| |||||||||||||||||||||| |||||| |||||||| ||| ||||    
T  32094061 aaaaaatcacataattcagtgtaattacaaatgtcggtgtc------gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtg 32093968  T
Q  668 tctgtgcttcatag 681  Q
    |  |||||||||||    
T  32093967 ttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 569 - 681
Target Start/End: Original strand, 2334268 - 2334379
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| ||||| |||||||||| |||||||||| |  ||| | |||||| ||| |||||    
T  2334268 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgt 2334366  T
Q  669 ctgtgcttcatag 681  Q
    | ||| |||||||    
T  2334367 ccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 537 - 673
Target Start/End: Complemental strand, 6630985 - 6630849
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||| | |||| |||| | ||| |||| ||||||||||||| || | |||||| |||| ||| |||||| ||||| ||||||| |    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacacaacacgtgcc 6630886  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtg 673  Q
    |||||||  ||||  ||||||||||| ||||| ||||    
T  6630885 cgacaccaagacacacctaatctgaggagtgtgtgtg 6630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 569 - 661
Target Start/End: Original strand, 21560521 - 21560613
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctga 661  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||| || ||||  ||||||  ||| |||||||||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgtctaacaccgaaacacgcctaatctga 21560613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 614
Target Start/End: Original strand, 27945024 - 27945104
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    |||||||||||||||||||||| | |||| |||| | ||||| |||||||||||||||| |||||||||||||||| ||||    
T  27945024 acggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 539 - 627
Target Start/End: Complemental strand, 11272659 - 11272569
Alignment:
Q  539 cactgacacgccgacacaaataattattttaaaaaatcacata--attcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg 627  Q
    |||||| |||||||||||| | || |||| |||||||||||||  ||||||||||| |||||||||||||||| |||||||||| ||||||    
T  11272659 cactgagacgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 21880201 - 21880271
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| |||||||||| ||||||||||| ||||| |||||||| |||||||||| |||||||||||    
T  21880201 tgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 537 - 662
Target Start/End: Original strand, 15902808 - 15902933
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||||| |||||||| |||||| |||| | |||||||||||||| ||||||| || | ||||||||||  ||||||| || |||||||||| || |    
T  15902808 gacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacacgacacatgcc 15902907  T
Q  637 cgacaccgggacatgcctaatctgag 662  Q
    ||| ||| ||||| || |||| ||||    
T  15902908 cgagaccaggacacgcttaatttgag 15902933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 536 - 609
Target Start/End: Original strand, 25481887 - 25481960
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||| |||||||||||||||  |||| |||| |||||||||||||||||||||||| ||||||||| ||||||    
T  25481887 ggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtc 25481960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 537 - 638
Target Start/End: Complemental strand, 26329455 - 26329354
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||    |||| |||| | |||| |||| |||||||||||| || | ||||||| ||| ||||||||||||||||||||||||||    
T  26329455 gacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgtc 26329356  T
Q  637 cg 638  Q
    ||    
T  26329355 cg 26329354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 610
Target Start/End: Complemental strand, 11061152 - 11061076
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||||||||| ||||||||  |||| |||| |||||||||||||||| ||| ||| |||||||||||||||||    
T  11061152 acggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtca 11061076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 536 - 684
Target Start/End: Original strand, 15680794 - 15680931
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    ||||||||||||||||||| |  |||| |||  |||||||||||||||| ||||||| || |||||||||||||            ||||||||||||||    
T  15680794 ggacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcg-----------gacacgacacgtgt 15680882  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcataggat 684  Q
    ||||||||| |||| | |||||  ||| |||||| ||||||||||||||    
T  15680883 ccgacaccgagacacgtctaattcgaggagtgtccgtgcttcataggat 15680931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 569 - 619
Target Start/End: Original strand, 18039017 - 18039067
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgt 619  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  18039017 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 21864857 - 21864927
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| |||| |||||||||||||||||||||||||||| | |||||  ||| ||||||||||||||||||    
T  21864857 tgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 549 - 609
Target Start/End: Original strand, 3991322 - 3991382
Alignment:
Q  549 ccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||| |||| |||| |||||||||||||||||||| ||| ||||||||||||||||    
T  3991322 ccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 3991382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 534 - 614
Target Start/End: Complemental strand, 18215262 - 18215182
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||| |||||||||| ||  |||| |||| ||||||||||||||| |||||||  |||||||||||||||| ||||    
T  18215262 acggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtc 18215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 577 - 680
Target Start/End: Original strand, 4794915 - 4795018
Alignment:
Q  577 acataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    |||||||||||||||| || ||||||||||  | | |||||||| |||||||||||| || ||||||   ||| | ||||||  ||||||||||||||||    
T  4794915 acataattcagtgtaattataagtgtcggtaccgtatcggtgtcggacacgacacgtatctgacacctaaacacgtctaatccaagaagtgtctgtgctt 4795014  T
Q  677 cata 680  Q
    ||||    
T  4795015 cata 4795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 605
Target Start/End: Original strand, 24105661 - 24105732
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcgg 605  Q
    |||||||||||||||||||||||  |||| |||| |||||||  ||| ||||||||||| ||||||||||||    
T  24105661 acggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcgg 24105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 19213811 - 19213861
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  19213811 taataattttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtc 19213861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 21568611 - 21568561
Alignment:
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  21568611 cgtgtcggacaccgggacatgcttaatctgaggagtgtctgtgcttcatag 21568561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 610
Target Start/End: Original strand, 23191865 - 23191955
Alignment:
Q  520 tatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    ||||||||||| ||||||||||||| ||||||||||   |||| |||| | ||||||||||| |||||||||| |||| || || ||||||    
T  23191865 tatgaagcacatatacggacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgtttcagtgtca 23191955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 657
Target Start/End: Complemental strand, 27229350 - 27229264
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaat 657  Q
    |||||||||||||| ||||||| || |||| |||||||| ||||  |||||||||||| |||||| ||||||  ||||| |||||||    
T  27229350 aaaatcacataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacgatacgtgttcgacactaggacacgcctaat 27229264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 559 - 620
Target Start/End: Original strand, 13300418 - 13300479
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtc 620  Q
    |||| |||| ||||||||| |||||||||||||| ||| ||| |||||||||||||||||||    
T  13300418 taataatttgaaaaaatcatataattcagtgtaattaccagtctcggtgtcatgtcggtgtc 13300479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 611 - 680
Target Start/End: Original strand, 22484074 - 22484143
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    ||||||||||||||| ||||| ||||||||| || |||||| || ||| |||||||||| ||||||||||    
T  22484074 tgtcggtgtcagacatgacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 611 - 680
Target Start/End: Complemental strand, 32287473 - 32287404
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||||||||| |||| |||| ||||||||||||||||||  ||||||| ||| |||||| ||||||||||    
T  32287473 tgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 1433437 - 1433578
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||| ||||||||||||||   |||| |||| | |||||||||| |||  |||||| || | ||||||||||| ||||||      ||| |||| ||    
T  1433437 acggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcgg------acaagacatgt 1433530  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| ||||| | |||||| ||| |||||| |||||||||||    
T  1433531 gtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 7197370 - 7197298
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||||||||||||||  |||| |||| |||||||||  ||||||| ||||| ||||||||||||||||    
T  7197370 gacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtc 7197298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 8234132 - 8234204
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||| ||||| ||||||||| |||| |||| ||||||| |||||||||||||||  |||||||| |||||||    
T  8234132 gacacagacacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtc 8234204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 18213110 - 18213034
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaa-aaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||| |||||||||||| ||||| |||| | |||||||||||||| ||||||| || | |||||||||||    
T  18213110 acggacactgatacgccgacacaactaattttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtc 18213034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 539 - 615
Target Start/End: Complemental strand, 22602781 - 22602705
Alignment:
Q  539 cactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    |||||||||||||||||    |||||||| | |||||||||||||||||||||| || | ||||||||||| |||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 610
Target Start/End: Original strand, 33994199 - 33994271
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||||||||||| ||| || | |||| ||||  ||||||||||||||| || |||||||||||||||||    
T  33994199 acactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtca 33994271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 676
Target Start/End: Original strand, 43249976 - 43250118
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc-atgtcggtgtcagacac-gacac 631  Q
    ||||||||||||||||||||||  ||||| |||| | ||||| ||||||| |||||||| || ||||||| |||||  |||| | ||| ||||| ||| |    
T  43249976 acggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc-gtgtcggtgtc-gcgtcggacactgacgc 43250073  T
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    |||||||||||| ||||| |||||||  ||| |||||| ||||||    
T  43250074 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 531 - 658
Target Start/End: Original strand, 21930609 - 21930735
Alignment:
Q  531 aatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgaca 630  Q
    |||| |||||||||||||||||| ||  |||| |||| ||||||| | |||||||| | ||| ||||||||||| |||| |||| ||||  ||||| | |    
T  21930609 aatatggacactgacacgccgactcagctaataattt-aaaaaattagataattcattttaattacaagtgtcgatgtcgtgtcagtgttggacacaaga 21930707  T
Q  631 cgtgtccgacaccgggacatgcctaatc 658  Q
    |||||||||| |||| |||  |||||||    
T  21930708 cgtgtccgacgccggaacacacctaatc 21930735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 35861951 - 35862022
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||| |||||||||||||| |||| |||| |||||||||||||||||| ||||| |  ||||||| |||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtc 35862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 661
Target Start/End: Original strand, 6028633 - 6028735
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| |||| || |||||||| | ||||| ||||| |||||||||| |||| |||||  |||||||||| || |||||| | |||| ||||||||    
T  6028633 taataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatc 6028732  T
Q  659 tga 661  Q
    |||    
T  6028733 tga 6028735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 681
Target Start/End: Complemental strand, 29763187 - 29763129
Alignment:
Q  623 acacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||||||| | ||||| |||||||| ||| |||||| |||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 681
Target Start/End: Complemental strand, 38804567 - 38804489
Alignment:
Q  604 ggtgtcatgtcggtgtcagacac-gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||| ||| |||||| ||||| |||  ||||||||| ||||||||||||||||| ||| ||||| ||||||||||||    
T  38804567 ggtgtcgtgttggtgtcggacaccgacgtgtgtccgacgccgggacatgcctaatccgaggagtgtatgtgcttcatag 38804489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 677
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  627 gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttc 677  Q
    ||||| |||||||||||||||||||||||||| ||| |||||| |||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 601
Target Start/End: Complemental strand, 13557817 - 13557750
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaa---tcacataattcagtgtaactacaagtg 601  Q
    |||||||||||||||||| || |||| |||| ||||||   |||||||||||||||||| ||||||||    
T  13557817 gacactgacacgccgacaaaactaataatttaaaaaaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 663
Target Start/End: Original strand, 19206033 - 19206162
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||  ||||||||||||   |||| |||| | |||||||||||||||| | ||| || | ||||||||||| ||| ||||||||| | ||||| |    
T  19206033 acggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtcttgttggtgtcagagatgacacat 19206132  T
Q  634 gtccgacaccgggacatgcctaatctgaga 663  Q
     || |||||||| | | | |||||||||||    
T  19206133 atctgacaccggaatacggctaatctgaga 19206162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 609
Target Start/End: Original strand, 28155535 - 28155628
Alignment:
Q  516 aacctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||  |||| ||| |  ||||||||||||   |||| |||| | ||||| ||||||||| |||||| ||||||||||||||||    
T  28155535 aacctatgaagcacggatactgactcgaacacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtc 28155628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 625
Target Start/End: Complemental strand, 3520415 - 3520327
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagaca 625  Q
    |||| |||||||| |||||  ||||| |||| | ||||||| |||||||| ||||| || | ||||||||| ||||| |||||||||||    
T  3520415 gacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtgacatgttggtgtcagaca 3520327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 534 - 666
Target Start/End: Complemental strand, 18013150 - 18013018
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||  | ||||| | |||| |||| ||||||| |||||||||||||||| || | ||||| ||||| ||||  | ||||||| |   |||    
T  18013150 acggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgtctatttcagacatgtgtcgt 18013051  T
Q  634 gtccgacaccgggacatgcctaatctgagaagt 666  Q
    |||||||||  |||||  |||| ||||||||||    
T  18013050 gtccgacacatggacacacctactctgagaagt 18013018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 538 - 606
Target Start/End: Complemental strand, 40287428 - 40287361
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggt 606  Q
    |||| |||||||||||||||  ||| |||| ||||||||| ||| |||||||||| |||||||||||||    
T  40287428 acacggacacgccgacacaacgaataatttgaaaaaatcatata-ttcagtgtaattacaagtgtcggt 40287361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 592
Target Start/End: Original strand, 1656674 - 1656717
Alignment:
Q  549 ccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||||||| ||| | ||||||||||||||||||||||||||||    
T  1656674 ccgacacaactaaattttttaaaaaatcacataattcagtgtaa 1656717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 7133283 - 7133212
Alignment:
Q  611 tgtcggtgtcagacac-gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| ||||| ||| |||||||||||| ||||||  ||||||||||| || ||| |||||||||||    
T  7133283 tgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 674
Target Start/End: Complemental strand, 18215187 - 18215144
Alignment:
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgc 674  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||    
T  18215187 cgtgtccgacaccgggacacgcctaatctgaggagtgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 592
Target Start/End: Original strand, 22868028 - 22868083
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||||||||||||||||| | |||| || | | ||||||||||||||||||||||    
T  22868028 gacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaa 22868083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 26733287 - 26733362
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||| ||||||   |||| |||| | |||||||||||||||||| ||| || | |||||||||||    
T  26733287 acggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtc 26733362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 611 - 658
Target Start/End: Original strand, 33994261 - 33994308
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    ||||||||||||||||||||| ||||| |||||| |||| ||||||||    
T  33994261 tgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatc 33994308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 681
Target Start/End: Complemental strand, 38134458 - 38134335
Alignment:
Q  558 ataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaat 657  Q
    ||||| |||| | ||||| |||||||||| |||||  | | |||||||| |||||| |||||  ||| ||| | || | ||||| ||||||| |||||||    
T  38134458 ataataatttgagaaaatgacataattcaatgtaatcatatgtgtcggtctcatgtgggtgttggactcgataagtattcgacatcgggacacgcctaat 38134359  T
Q  658 ctgagaagtgtctgtgcttcatag 681  Q
    | ||| ||||| ||||||||||||    
T  38134358 ccgaggagtgtatgtgcttcatag 38134335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 613 - 682
Target Start/End: Original strand, 1401076 - 1401143
Alignment:
Q  613 tcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||| |||||||||  ||||||||| |||||||  ||||||||||| ||||||  |||||||||||    
T  1401076 tcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcatagg 1401143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 5835296 - 5835366
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||| |||| ||||| || ||||||||| || ||||| ||||||||| | ||||| ||||    
T  5835296 tgtcggtgtcagacatgacatgtgtctgataccgggacacgcttaatccgagaagtgtttttgctttatag 5835366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 622 - 688
Target Start/End: Original strand, 17852060 - 17852126
Alignment:
Q  622 gacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcataggatacaa 688  Q
    |||| |||||||||||||||||| ||||  ||||||  ||| |||||| ||||||||||| ||||||    
T  17852060 gacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatagtatacaa 17852126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 18213043 - 18212973
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| |||||||| | | || ||||| |||||| |||| ||| ||| ||||||||||||||||||    
T  18213043 tgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 542 - 659
Target Start/End: Original strand, 21831768 - 21831883
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgaca 641  Q
    ||||| |||||||| |  ||| ||||| |||||||||||||  ||||||||   || ||||  ||||||||||||||||| ||||||||| ||| |||||    
T  21831768 tgacatgccgacaccacaaataatttttaaaaatcacataaaacagtgtaat--catgtgttagtgtcatgtcggtgtcaaacacgacacatgtgcgaca 21831865  T
Q  642 ccgggacatgcctaatct 659  Q
     || |||| | |||||||    
T  21831866 tcgagacaagtctaatct 21831883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 631 - 681
Target Start/End: Complemental strand, 40131989 - 40131939
Alignment:
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||| |||||| | |||||| ||| ||||||||||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 538 - 592
Target Start/End: Original strand, 41020483 - 41020537
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||||||||| |||||||| |||| ||||  ||||||||||||||| |||||||    
T  41020483 acactgacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaa 41020537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 610
Target Start/End: Original strand, 640127 - 640172
Alignment:
Q  565 ttttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||| ||||||||||||||||||||| || | ||||||||||||    
T  640127 ttttaacaaatcacataattcagtgtaattatatgtgtcggtgtca 640172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 626
Target Start/End: Original strand, 1885591 - 1885648
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac 626  Q
    ||||||| |||||||||| |||||  ||||||||||||||| ||| |||||| |||||    
T  1885591 aaaaaatgacataattcaatgtaatcacaagtgtcggtgtcgtgttggtgtcggacac 1885648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 610
Target Start/End: Original strand, 5835233 - 5835306
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||| |||||||||| | ||||  ||| | ||||| |||||||||||||||| || | ||||||||||||    
T  5835233 gacactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtca 5835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 681
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||||| || ||||| ||| |||||| |||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 615
Target Start/End: Original strand, 7058429 - 7058490
Alignment:
Q  554 acaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    |||| |||| |||| |||||||||  ||||||||||||| ||||||||| |||||| |||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgtgtcg 7058490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 610
Target Start/End: Original strand, 22484011 - 22484084
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||||||||||||||   |||| |||||| |||||  ||||||||||| ||| || | ||||||||||||    
T  22484011 gacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtca 22484084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 577 - 654
Target Start/End: Complemental strand, 22801774 - 22801697
Alignment:
Q  577 acataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcct 654  Q
    |||||||||| |||||  ||||||||||||||  |||| ||||| ||||| |||| |||| ||||| |||||| ||||    
T  22801774 acataattcactgtaatcacaagtgtcggtgtattgtcagtgtctgacaccacacttgtcggacactgggacacgcct 22801697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 681
Target Start/End: Original strand, 24105740 - 24105797
Alignment:
Q  624 cacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||| ||| |||||||||||||||||| |||||| | ||| ||||| ||||||||||||    
T  24105740 cacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 685
Target Start/End: Original strand, 35749957 - 35750010
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcataggata 685  Q
    |||||||| |||||||||  |||| || ||| ||||||||||||||||||||||    
T  35749957 gtgtccgaaaccgggacacacctagtcggaggagtgtctgtgcttcataggata 35750010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 627
Target Start/End: Original strand, 37742506 - 37742599
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg 627  Q
    |||||||||| ||||||||||| | |||| |||| | |||||  ||| ||||| |||||  | | ||||||||||||| |||||||| ||||||    
T  37742506 acggacactgccacgccgacaccactaataatttaacaaaatttcatgattcaatgtaataatatgtgtcggtgtcatatcggtgtcggacacg 37742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 610
Target Start/End: Original strand, 48438564 - 48438605
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||||||||||||| ||||| |||| ||||||||||||    
T  48438564 aaaaaatcacataattcaatgtaattacacgtgtcggtgtca 48438605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 5e-43; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 536 - 681
Target Start/End: Original strand, 16766682 - 16766827
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    |||||||||||||||||||||  |||| |||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| ||||||||    
T  16766682 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgt 16766781  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||| |||||||| ||  | |||| |||||||||||    
T  16766782 ccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 534 - 682
Target Start/End: Complemental strand, 8365595 - 8365447
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||| |||| |||| |||| |||||||||||| |||||| |||||||||||||||| ||||||| || ||||||||||||    
T  8365595 acggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgt 8365496  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||| |||||| |||||||| ||| ||| || ||||||||||||    
T  8365495 gtccgacactgggacacgcctaatccgaggagtctccgtgcttcatagg 8365447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 536 - 681
Target Start/End: Complemental strand, 10770748 - 10770607
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg--acacgt 633  Q
    ||||||||||||||| |||||| |||| |||| |||||||||||||||||||||||| ||||||||||||||||      ||||||||||||  ||||||    
T  10770748 ggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc------gtgtcagacacgacacacgt 10770655  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||  ||||||||||||||||||||| |||||| |||||||||||    
T  10770654 gtccgatgccgggacatgcctaatctgaggagtgtccgtgcttcatag 10770607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 9107446 - 9107299
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||| |||||||||||||  |||| |||| ||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||| ||  ||    
T  9107446 acggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgt 9107347  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||||  ||||||| ||| |||| | |||||||||||    
T  9107346 gtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 537 - 681
Target Start/End: Complemental strand, 5970181 - 5970037
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||| |||||| |||||||  |||| |||| |||||||||||||||||||||||| ||||| ||| |||||| |||||||||| |||||||||| | ||    
T  5970181 gacacggacacgtcgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttc 5970082  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| ||||||| ||| |||| ||| |||| || ||||||||||    
T  5970081 cgacatcgggacacgcccaatccgaggagtgactatgcttcatag 5970037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 17435182 - 17435329
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||| ||| ||||| |  |||| |||||||||||| |||||||||||||||| |||||||||  ||||  ||||| |||| ||||||||||||    
T  17435182 acggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgt 17435281  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || |||||| |||||| | ||||||||| ||||||| || ||||||||    
T  17435282 gttcgacactgggacacgtctaatctgaaaagtgtccgtacttcatag 17435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 543 - 682
Target Start/End: Original strand, 18367828 - 18367967
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacac 642  Q
    ||||||||||||||  ||||| ||||| ||||||||| ||| |||||||| || | ||||||||||| ||||||||||||||||||||| |||| |||||    
T  18367828 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacac 18367927  T
Q  643 cgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
     |||||| |||| |||  || |||||| ||||||||||||    
T  18367928 ggggacacgccttatccaaggagtgtccgtgcttcatagg 18367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 534 - 679
Target Start/End: Original strand, 12696307 - 12696446
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| ||||||| |||||||||||||||| |||||||||| |||||      ||||| ||||||||||||    
T  12696307 acggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtc------gtgtcggacacgacacgt 12696400  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||| ||||||||||||  ||| |||  || ||||||||||||||||    
T  12696401 gtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 34595117 - 34595253
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||| |||||||||||||||| |||| |||| |||||||||||||||||||||||| ||||||           |||||||||| ||||||||||||    
T  34595117 acggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaag-----------tgtcggtgtcggacacgacacgt 34595205  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||| ||||||||||||  ||||||| ||| |||||| |||||||||||    
T  34595206 gtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 569 - 681
Target Start/End: Original strand, 8713998 - 8714110
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||||||||||| ||||| ||| |||||| |||||||||| |||||||||| | ||||||| ||||||| ||| |||| ||| |||||    
T  8713998 aaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgt 8714097  T
Q  669 ctgtgcttcatag 681  Q
    || ||||||||||    
T  8714098 ctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 534 - 682
Target Start/End: Complemental strand, 8777049 - 8776907
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||| ||||||||| ||     ||||||   | ||||||||||||    
T  8777049 acggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttgg-----tgtcggacac-gacacgacacgt 8776956  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||||| ||||  ||||||| ||| |||||| ||||||||||||    
T  8776955 gtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatagg 8776907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 559 - 658
Target Start/End: Original strand, 9522899 - 9522998
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||  |||||||||| ||  ||||||||||||||||||| |||| ||||||||    
T  9522899 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatc 9522998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 554 - 680
Target Start/End: Original strand, 31384923 - 31385048
Alignment:
Q  554 acaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcc 653  Q
    |||| |||| |||| |||||||||||||||||||||||| |||||||||| ||||| |||  ||||  |||||||||||||||| ||||||||||| |||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt-agtgttggacacgacacgtgtcctacaccgggacacgcc 31385021  T
Q  654 taatctgagaagtgtctgtgcttcata 680  Q
    |||||  || |||||| ||||||||||    
T  31385022 taatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 538 - 682
Target Start/End: Complemental strand, 10339198 - 10339053
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgt-aactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||    | | |||| | |||||||||||||||||||| || || | ||||| ||| | |||||||||| |||||||||| ||||    
T  10339198 acactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtc 10339099  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||| |||||| |||||||| ||| |||||| ||||||||||||    
T  10339098 cgacactgggacacgcctaatcggaggagtgtccgtgcttcatagg 10339053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 28152082 - 28152217
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||||||||||| |  |||| |||| ||||| |||||||||||||||||| ||||||||||||||||            ||||||||||||    
T  28152082 acggacactgacacgccgacaaagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcg-----------gacacgacacgt 28152169  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||| |||||||| ||| |||||  |||||||||||    
T  28152170 gtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 543 - 654
Target Start/End: Complemental strand, 16488657 - 16488546
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacac 642  Q
    ||||||||||||||  ||||| ||||| ||||||||| ||| |||||||| || | ||||||||||| |||||||||| ||||||||||||||| | |||    
T  16488657 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcac 16488558  T
Q  643 cgggacatgcct 654  Q
     |||||| ||||    
T  16488557 ggggacacgcct 16488546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 537 - 682
Target Start/End: Original strand, 16833294 - 16833428
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||| |||||||||| ||||||||||||||| |           ||||||||||| |||    
T  16833294 gacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgtta-----------gacacgacacgcgtc 16833382  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||| |||||  || |||| ||| ||||||||| |||||||||    
T  16833383 cgacaccaggacacaccgaatccgaggagtgtctgtacttcatagg 16833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 599 - 677
Target Start/End: Complemental strand, 23130483 - 23130405
Alignment:
Q  599 gtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttc 677  Q
    ||||| ||||||||| |||||||||||||||||||||| || | |||||||||||||||||||| ||||| ||||||||    
T  23130483 gtgtcagtgtcatgttggtgtcagacacgacacgtgtctgatatcgggacatgcctaatctgaggagtgtatgtgcttc 23130405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 537 - 681
Target Start/End: Original strand, 3209367 - 3209518
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaa-tcacataattcagtgtaactacaagtgt------cggtgtcatgtcggtgtcagacacgac 629  Q
    ||||| ||||||||||||||  |||| |||| |||||| |||||||||| ||||| | |||||||||      ||||||| |||| |||||  |||||||    
T  3209367 gacacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcggtgtcgtgtcagtgtcgaacacgac 3209466  T
Q  630 acgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||| |||||||||| ||||| |||||||| ||| ||||| ||||||||||||    
T  3209467 acgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 680
Target Start/End: Complemental strand, 17841665 - 17841530
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||||||| ||||||| ||||||           || ||||||| ||||||||| ||    
T  17841665 acggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaag-----------tgacggtgtcggacacgacatgt 17841577  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    ||||||||| | |||| |||||||| ||| |||||| ||||||||||    
T  17841576 gtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 426590 - 426515
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||||||| | ||||| ||||||||||||||||    
T  426590 acggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtc 426515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 538 - 609
Target Start/End: Complemental strand, 7801228 - 7801157
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||| |||||||||||||| |||| |||| ||||||||||||||||||| |||| ||||||||||||||||    
T  7801228 acactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 7801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 682
Target Start/End: Complemental strand, 17327728 - 17327589
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||| ||| |||||||||||| |||   ||| | |||||||||||||| |||||||||| | ||||| ||||| ||||||      ||||||||||||||    
T  17327728 gacagtgatacgccgacacaactaagattttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcgg------acacgacacgtgtc 17327635  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
     ||||| |||||| |||||||| ||| |||||| ||||||||||||    
T  17327634 tgacacagggacacgcctaatccgaggagtgtccgtgcttcatagg 17327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 25038110 - 25038000
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    ||||| |||||||| ||||||| ||||| ||||||| |  ||| |||||| |||||||||||||||||||||| | ||| || | | ||||||||||| |    
T  25038110 aaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacaccagaacacgcatgacctgagaagtgtat 25038011  T
Q  671 gtgcttcatag 681  Q
    |||||||||||    
T  25038010 gtgcttcatag 25038000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 540 - 609
Target Start/End: Complemental strand, 7977900 - 7977831
Alignment:
Q  540 actgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||  |||| |||| ||||||| |||||||||||||||| ||||||||||||||||    
T  7977900 actgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 7977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 17302543 - 17302664
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaa-aatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||||||| ||||||| |||| |||| |||| |||||||||||||| ||||| ||||||||||  |||| |||| || | |||||| |||||||||    
T  17302543 acactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtcgtgtcagtattagacacaacacgtgtc 17302642  T
Q  637 cgacaccgggacatgcctaatc 658  Q
    ||||| ||| |||  |||||||    
T  17302643 cgacatcggaacacacctaatc 17302664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 541 - 609
Target Start/End: Complemental strand, 853928 - 853860
Alignment:
Q  541 ctgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||| |||| |||| |||||||||||||||| |||| || ||||||||||||||||    
T  853928 ctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc 853860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 614
Target Start/End: Original strand, 7930288 - 7930368
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||||||| |||||||||| |||| |||| |||||||||||||||| |||| || | |||||||||||||| ||||    
T  7930288 acggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgtc 7930368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 611 - 682
Target Start/End: Original strand, 28715344 - 28715415
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||  |||||||||  ||||||||||||    
T  28715344 tgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatagg 28715415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 538 - 604
Target Start/End: Original strand, 1681745 - 1681811
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    ||||| |||||||||||||| |||| |||| |||||||||| ||||||||||||| |||||||||||    
T  1681745 acactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 7378028 - 7378098
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| ||||||||| |  ||||||||||||||| | ||||||||||||||||| |||||||||||    
T  7378028 tgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcatag 7378098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 24645530 - 24645600
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||||||||||||||||||||  |||| | |||||| ||  ||||||||||||||||||    
T  24645530 tgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 538 - 668
Target Start/End: Original strand, 26562676 - 26562806
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    |||| |||||||||||||   |||  |||| | |||||||||||||||||||||| || | |||||| |||| ||||||||||  ||||| ||| |||||    
T  26562676 acacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacggcacatgtcc 26562775  T
Q  638 gacaccgggacatgcctaatctgagaagtgt 668  Q
    || |  | |||||| ||||||||||||||||    
T  26562776 gatatagagacatggctaatctgagaagtgt 26562806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 572 - 681
Target Start/End: Original strand, 7248379 - 7248488
Alignment:
Q  572 aaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctg 671  Q
    |||||||||||||||| |||| || | |||| || ||| |||||||||  ||||| ||| |||||||||||||||||| | | |||| ||| |||||| |    
T  7248379 aaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccg 7248478  T
Q  672 tgcttcatag 681  Q
    ||||||||||    
T  7248479 tgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 536 - 609
Target Start/End: Original strand, 7938101 - 7938174
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||  |||| |||| ||||||||| |||||| ||||||| || |||||||||||||    
T  7938101 ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 573 - 682
Target Start/End: Original strand, 10294129 - 10294238
Alignment:
Q  573 aatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgt 672  Q
    |||| |||| |||| ||||| || | ||||||||||| ||| |||||| ||||||||| |||||||| ||  |||||   |||||||||| |||||||||    
T  10294129 aatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgt 10294228  T
Q  673 gcttcatagg 682  Q
    ||||||||||    
T  10294229 gcttcatagg 10294238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 5626769 - 5626697
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| || |||||||||| || | |||||||||||    
T  5626769 gacactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtgtcggtgtc 5626697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 668
Target Start/End: Original strand, 3398602 - 3398729
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  ||| || ||| |||||||| |||||||||||||| || |||| ||||||||      ||||  |||||||||| |    
T  3398602 acggacactgacacgccgacacagctaa-taatttgaaaaatcatataattcagtgtaattataagtatcggtgtc------gtgttggacacgacacat 3398694  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||| ||| | |||||| ||| |||||    
T  3398695 gtccgacaccggaacacgtctaatcagaggagtgt 3398729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 15489808 - 15489733
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||| ||||| |||||||| |||| |||| ||||||| ||| |||||| ||||| ||||||||||||||||    
T  15489808 acggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 605
Target Start/End: Original strand, 31959146 - 31959213
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcgg 605  Q
    |||||||||||||| ||||  |||| |||| ||||||||||||||| |||||||| ||||||||||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 403915 - 403865
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtc 403865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 609
Target Start/End: Complemental strand, 7265684 - 7265594
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||  || |||||||||||||||| ||||   |||| |||| | |||||||||||||||||||||| || | |||||||||||    
T  7265684 ctatgaagcacgtattcggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 7265594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 536 - 614
Target Start/End: Original strand, 19044449 - 19044527
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    |||||||||||||||||||| | |||| |||| | || ||||||||||||||||| | || | ||||||||||||||||    
T  19044449 ggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtcatgtc 19044527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 5000702 - 5000557
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||| ||||||||| ||||||   |||| |||  | |||||||||| ||||||| ||| |  |  |||| ||||||||||||||||||||||||||| |    
T  5000702 acggatactgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacat 5000603  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
     ||||||||| ||||| | |||||| ||  |||||  |||||||||    
T  5000602 atccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 611 - 682
Target Start/End: Original strand, 4877992 - 4878062
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||| |||||||||| |||||||||| || ||| |||||||| ||| |||||| ||||||||||||    
T  4877992 tgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcatagg 4878062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 631 - 678
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttca 678  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 539 - 681
Target Start/End: Original strand, 32313392 - 32313535
Alignment:
Q  539 cactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac-gacacgtgtcc 637  Q
    ||||||||||||||||| |||||| | || | ||||| |||| ||||| || || || | |||| |||||| |||||||||||||||| |||   |||||    
T  32313392 cactgacacgccgacaccaataataagttgagaaaataacatgattcaatgcaattatatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtcc 32313491  T
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
     |||||||||||  | ||| | ||||| |||| |||||||||||    
T  32313492 aacaccgggacacacttaacccgagaaatgtccgtgcttcatag 32313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 599 - 681
Target Start/End: Complemental strand, 32839654 - 32839571
Alignment:
Q  599 gtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgaca-ccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||| ||||||||||  ||||| |||| |||| |||||  ||| |||||||| |||||||| ||||||||||||||||||||||    
T  32839654 gtgttggtgtcatgttagtgtcggacaagacatgtgtctaacaaccgggacacgcctaatccgagaagtgtctgtgcttcatag 32839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 611 - 678
Target Start/End: Complemental strand, 32978909 - 32978842
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttca 678  Q
    |||||||||| |||||||||| ||||||||||||||||| | ||||||  || |||||| ||||||||    
T  32978909 tgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 34073423 - 34073278
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||| ||| |||    |||| |||| | |||||| ||||||||||||||| || | | ||||||||| ||||||||||  |||||||| ||    
T  34073423 acggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc-tacacgacatgt 34073325  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    | ||||||||||||||   |||||  ||| |||||| |||||||||||    
T  34073324 g-ccgacaccgggacacctctaattcgaggagtgtccgtgcttcatag 34073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 534 - 592
Target Start/End: Original strand, 9658862 - 9658920
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||||||||||||||||||||   |||| |||| | ||||||||||||||||||||||    
T  9658862 acggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaa 9658920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 572 - 614
Target Start/End: Complemental strand, 9911566 - 9911524
Alignment:
Q  572 aaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||||||||||||||| |||||||||||||||| ||||    
T  9911566 aaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 9911524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 610
Target Start/End: Complemental strand, 27904129 - 27904036
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaat--cacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||| ||||||  ||||||||| ||||||||||||| |  |||| |||| ||||||   ||||||||||||||||| ||||| |||||||||||    
T  27904129 ctataaagcacggatacggacattgacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcggtgtca 27904036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 680
Target Start/End: Original strand, 6665282 - 6665331
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtc-tgtgcttcata 680  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  6665282 gtgtccgacacggggacatgcctaatccgagaagtgtcttgtgcttcata 6665331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 6898355 - 6898282
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||| |||||   |||| |||| || |||| |||||||| ||||||| ||||||||||||||||    
T  6898355 ggacactgacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtc 6898282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 603
Target Start/End: Complemental strand, 17341740 - 17341671
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtc 603  Q
    |||| |||||||||||||||||   |||| |||| | |||||||||||||||||||||| || |||||||    
T  17341740 acgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 609
Target Start/End: Complemental strand, 32978986 - 32978900
Alignment:
Q  518 cctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaat-cacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||||||      |||||||||  |||| |||| ||||||  ||||||||| ||||||| ||||||||||||||||    
T  32978986 cctatgaagcacaaatacggacac------gccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtc 32978900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 534 - 614
Target Start/End: Original strand, 9027161 - 9027241
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||||||||||||||||   |||| |||| | | ||||||||||||| |||||| || | ||||||||||| ||||    
T  9027161 acggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcgtgtc 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 681
Target Start/End: Original strand, 9629374 - 9629513
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc-atgtcggtgtcagacacgacacgtgtccgac 640  Q
    ||||||||||||||    ||| |||| | |||||||||||||||| ||||| || | |||||||||||  |||| ||||| ||||| ||| |||||||||    
T  9629374 tgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtc-gtgtcggacacaacatgtgtccgac 9629472  T
Q  641 accgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || | |||| | |||||| ||| ||||||  ||||||||||    
T  9629473 actgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 23771562 - 23771636
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||| ||||||||||||||  ||| || |||||||||| | ||| |||||||||| ||||| ||||||||||    
T  23771562 acggacacggacacgccgacacagttaa-taatttaaaaaattatatacttcagtgtaattacaaatgtcggtgtc 23771636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 586
Target Start/End: Complemental strand, 24115918 - 24115871
Alignment:
Q  539 cactgacacgccgacacaaataattattttaaaaaatcacataattca 586  Q
    ||||||||||| ||||||| |||| |||| ||||||||||||||||||    
T  24115918 cactgacacgctgacacaactaataatttcaaaaaatcacataattca 24115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 605 - 678
Target Start/End: Complemental strand, 8389484 - 8389411
Alignment:
Q  605 gtgtcatgtcggtgtcagacacgacacg-tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttca 678  Q
    |||||||||||||||| ||| | ||||| |||||||||||||||||  ||||||| ||| |||||| ||||||||    
T  8389484 gtgtcatgtcggtgtcggac-caacacggtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 637
Target Start/End: Complemental strand, 9195793 - 9195727
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    ||||| |||||||| ||||||| || | ||||||||||| ||| |||||| ||||||||| ||||||    
T  9195793 aaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacgacatgtgtcc 9195727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 657
Target Start/End: Original strand, 9658928 - 9658974
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaat 657  Q
    ||||||||| |||||||||||||||| |||||||| ||| |||||||    
T  9658928 tgtcggtgttagacacgacacgtgtctgacaccggaacacgcctaat 9658974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 536 - 626
Target Start/End: Complemental strand, 21395381 - 21395292
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac 626  Q
    |||||| |||||||| ||||   |||| |||| | ||||| |||||||| ||||||| |||||||||||||||| |||| ||||| |||||    
T  21395381 ggacaccgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 626 - 680
Target Start/End: Original strand, 31959214 - 31959268
Alignment:
Q  626 cgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    ||||| ||||||||||||||||||  ||||||| ||| |||||| ||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 1191763 - 1191706
Alignment:
Q  547 cgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    ||||||||||  |||| |||| ||||| ||||| |||||||||||| |||||||||||    
T  1191763 cgccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 564 - 609
Target Start/End: Original strand, 1700365 - 1700410
Alignment:
Q  564 attttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| ||||||||||||| |||||||||| || |||||||||||||    
T  1700365 atttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtc 1700410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 5732584 - 5732511
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||   |||| |||| | ||||||||||| || ||||||| || | |||||||||||    
T  5732584 ggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtc 5732511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 609
Target Start/End: Original strand, 19040341 - 19040410
Alignment:
Q  540 actgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||   |||| |||| | |||||||||||||||||||||| || | ||||| |||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtc 19040410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 679
Target Start/End: Complemental strand, 26178661 - 26178620
Alignment:
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||||| |||||||| ||| ||||||||||||||||    
T  26178661 gacaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 538 - 626
Target Start/End: Complemental strand, 34290149 - 34290063
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac 626  Q
    ||||||||| |||||||||| |||| ||||   | |||||||||||||||||||| |  | ||||||||||| |||| ||||| |||||    
T  34290149 acactgacatgccgacacaactaataatttgcgagaatcacataattcagtgtaatt--atgtgtcggtgtcgtgtcagtgtccgacac 34290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 88; Significance: 7e-42; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 241577 - 241724
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| ||||  ||||||||||||||| ||||||| ||  |||||||||||| ||| |||||| ||||||||||||    
T  241577 acggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgt 241676  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||    
T  241677 gtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 631 - 682
Target Start/End: Complemental strand, 236964 - 236913
Alignment:
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||| ||||||||||||  ||||||||||| |||||||||||||||||||    
T  236964 cgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcatagg 236913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 1e-40; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 537 - 682
Target Start/End: Complemental strand, 41961723 - 41961578
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||| ||||| |||| |||| |||| ||||||| |||| |||||| |||||||||||||||| ||||||| || |||||||||||||||    
T  41961723 gacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtc 41961624  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||| |||||| |||||||| |||||||||| ||||||||||||    
T  41961623 cgacactgggacacgcctaatccgagaagtgtccgtgcttcatagg 41961578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 543 - 682
Target Start/End: Original strand, 14209105 - 14209244
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacac 642  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||||||| |||||     
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacat 14209204  T
Q  643 cgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||| |  |||||||  ||||||||| ||||||||||||    
T  14209205 cgggatacacctaatccaagaagtgtccgtgcttcatagg 14209244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 516 - 681
Target Start/End: Original strand, 27505211 - 27505370
Alignment:
Q  516 aacctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    ||||||||||||||  ||||||| || |||| |||||||||  |||| ||||| ||||||||||||||| ||||||| ||||||||||||||||          
T  27505211 aacctatgaagcacggatacggatacggacaagccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtc------ 27505304  T
Q  616 gtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||    
T  27505305 gtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 538 - 679
Target Start/End: Complemental strand, 4987363 - 4987222
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    |||||||||||||||||||  |||| |||| |||||||||||||||||||||||| ||||||||| |||| | |||||||||  ||||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtcc 4987264  T
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||||| |||||||| ||| |||||| || ||||||    
T  4987263 gacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 534 - 680
Target Start/End: Original strand, 14216875 - 14217021
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||||| |||||||| |||| ||||||||| |||| |||||||||||||| |||||||||| ||||| |||  ||||| ||||||||||||    
T  14216875 acggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgt 14216974  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    || |||||| ||||||  ||||||| |||||||||| ||||||||||    
T  14216975 gtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 534 - 680
Target Start/End: Original strand, 14223004 - 14223150
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||||| |||||||| |||| ||||||||| |||| |||||||||||||| |||||||||| ||||| |||  ||||| ||||||||||||    
T  14223004 acggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgt 14223103  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    || |||||| ||||||  ||||||| |||||||||| ||||||||||    
T  14223104 gtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 534 - 682
Target Start/End: Original strand, 28812499 - 28812646
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||| ||||||||||||||| |||| |||| || ||||||||||||||||||||  |||||||||||||||| ||| |||||||||||||| || |    
T  28812499 acggacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacat 28812597  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||| | ||||| |||||||| ||| ||||||||||| |||||||    
T  28812598 gtccgacagcaggacacgcctaatccgaggagtgtctgtgcctcatagg 28812646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 537 - 681
Target Start/End: Complemental strand, 34185196 - 34185052
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||| ||||||||||||||   |||| |||| ||||||||||| |||||||||||| |||||||||||||||| ||||  |||| |||| |||| |||||    
T  34185196 gacagtgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtc 34185097  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||| |||||||| ||| |||||| |||||||||||    
T  34185096 cgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 534 - 658
Target Start/End: Complemental strand, 15796370 - 15796246
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||| |||||||||||||||  |||| |||| ||||||||| |||||||||||||| ||||| |||||||||| ||| |||||| ||||| ||||||    
T  15796370 acggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgt 15796271  T
Q  634 gtccgacaccgggacatgcctaatc 658  Q
    |||| ||||||| ||| ||||||||    
T  15796270 gtccaacaccggaacacgcctaatc 15796246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 534 - 657
Target Start/End: Original strand, 14832082 - 14832205
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||| || |||||||||| |||  |||| |||| |||||||||||||| ||| ||||| |||||||||| ||||| ||||||| || ||||||||||||    
T  14832082 acggatacggacacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgt 14832181  T
Q  634 gtccgacaccgggacatgcctaat 657  Q
    |||||||||||||||| |||||||    
T  14832182 gtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 537 - 680
Target Start/End: Complemental strand, 16000089 - 15999951
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||||| |||| |||| ||||||| |||||||||||||||||||||||||||||     ||||||   |  ||||||||||||||    
T  16000089 gacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcgg-----tgtcggacacgtacacgacacgtgtc 15999995  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    ||||||||||||| ||||||||  || |||||| |||| |||||    
T  15999994 cgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 55401058 - 55401194
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||| |||||||||||| |||| |||| |||||||||||||||| ||||||| ||||||           |||||||||| ||||||||||||    
T  55401058 acggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaag-----------tgtcggtgtcggacacgacacgt 55401146  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||| |||| |||||||| ||| |||||| |||||||||||    
T  55401147 gtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 559 - 682
Target Start/End: Complemental strand, 49651837 - 49651715
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| |||||||||||||||||| ||||| |||||||||||||||| ||||||   | |||||||||| | |||||||||||||||  |||||||    
T  49651837 taataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcgg-accggacacgacacatatccgacaccgggacacacctaatc 49651739  T
Q  659 tgagaagtgtctgtgcttcatagg 682  Q
     |||||||||| ||||||||||||    
T  49651738 cgagaagtgtccgtgcttcatagg 49651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 537 - 677
Target Start/End: Original strand, 14829676 - 14829816
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt-gt 635  Q
    ||||||||||||||||||||  |||| |||| |||| |||||||||||||  |||| |||||||||||||||| |||||||||  ||||||| | || ||    
T  14829676 gacactgacacgccgacacagctaataatttgaaaa-atcacataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgagatgtggt 14829774  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttc 677  Q
     ||||||||||||| |||||||||||| | |||| |||||||    
T  14829775 tcgacaccgggacacgcctaatctgaggaatgtccgtgcttc 14829816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 548 - 682
Target Start/End: Original strand, 55212960 - 55213093
Alignment:
Q  548 gccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccggga 647  Q
    |||||||||  |||| ||||||||||||||||||||| |||| || |||||||||||||||  |||||||||| | ||| ||||||||||||||||| ||    
T  55212960 gccgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgaga 55213058  T
Q  648 catgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    || || |||||  |||||| || ||||| ||||||    
T  55213059 cacgcataatccaagaagtatccgtgctacatagg 55213093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 537 - 681
Target Start/End: Original strand, 20503451 - 20503584
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||||||||||||||||  ||| |||| ||||||| |||||||||||||||| |||||||||||||||  ||         |||||||||| ||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt--tg---------gacacgacacatgtc 20503539  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
     |||||||||||| |||||||| ||| |||||| |||||||||||    
T  20503540 tgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 679
Target Start/End: Original strand, 28917984 - 28918120
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||| ||||||||||||||| |  |||| |||| |||||||||||||||||||||||| |||||||||||||||| ||         ||||||||||||    
T  28917984 acggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg---------gacacgacacgt 28918074  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||||||||| |||||| ||||||||  || ||||||  ||||||||    
T  28918075 gtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 535 - 658
Target Start/End: Complemental strand, 2620128 - 2620007
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtg 634  Q
    ||||||||||||||||||||| | |||| |||| | |||||||||||||| |||||||||  | |||| |||||| || |||||| ||||||||||| ||    
T  2620128 cggacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaact--atgtgttggtgtcgtggcggtgttagacacgacacatg 2620031  T
Q  635 tccgacaccgggacatgcctaatc 658  Q
    |||| || ||||||| ||||||||    
T  2620030 tccggcatcgggacacgcctaatc 2620007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 519 - 681
Target Start/End: Original strand, 18426917 - 18427068
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtg 618  Q
    |||||||||||| |||||||||| ||||||||||||| | |||| |||| ||||||||||||||||| |||||| || |            |||||||||    
T  18426917 ctatgaagcacagatacggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattata-----------tatgtcggtg 18427005  T
Q  619 tcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || || |||||||||||||| ||||||||||  ||||||||||| |||||| ||| |||||||    
T  18427006 tcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 543 - 631
Target Start/End: Original strand, 34910309 - 34910397
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacac 631  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||||||| |||||| ||||||||| | |||||||| |||| |||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggacatgacac 34910397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 10954939 - 10955010
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||||||||||||  |||||||||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtc 10955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 638
Target Start/End: Complemental strand, 750695 - 750590
Alignment:
Q  534 acggacact-gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacg 632  Q
    ||||||||| |||||| |||||||| |||| |||| |||| ||||||||||||  || || |||||||||||||||| ||||||| || |||||||||||    
T  750695 acggacacttgacacggcgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacgacacg 750596  T
Q  633 tgtccg 638  Q
    ||||||    
T  750595 tgtccg 750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 536 - 681
Target Start/End: Complemental strand, 17005693 - 17005548
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    |||||||||| | || |||| | |||| |||| | ||||||| |||||||||||||| || ||||||||||||  ||| |||||||||||  ||||||||    
T  17005693 ggacactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgt 17005594  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    | |||||| |||||   |||||| ||| ||||| ||||||||||||    
T  17005593 ctgacaccaggacacctctaatccgaggagtgtttgtgcttcatag 17005548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 542 - 681
Target Start/End: Complemental strand, 8039903 - 8039764
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgaca 641  Q
    ||||||||| ||||   |||| |||| | ||||| | |||||||||||||| || | ||||||||||| |||||||||| |||| || || |||||||||    
T  8039903 tgacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgaca 8039804  T
Q  642 ccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||| || ||||| ||  ||| ||||||||||||||    
T  8039803 ccgggacacgcttaatccgaagagtatctgtgcttcatag 8039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 8587097 - 8587022
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||  || | |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  8587097 acggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtc 8587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 538 - 681
Target Start/End: Original strand, 9800027 - 9800170
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    ||||||||||||||||||   |||| |||| | ||||| ||||||||| |||||| |  ||||||||||||| ||||||| ||||| | || |||||||     
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcggtatcagagatgatacgtgtcg 9800126  T
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||| ||||| |||||||| |||  || || |||||||||||    
T  9800127 gacacctggacacgcctaatcggaggcgtttccgtgcttcatag 9800170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 10335362 - 10335287
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| |||| |||| ||||| ||||||| || ||||||| ||||||||||||||||    
T  10335362 acggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 10335287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 536 - 610
Target Start/End: Complemental strand, 10268560 - 10268486
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||||||||||||||||  |||| |||| |||||||||||||||| ||||||| |||||||||| ||||||    
T  10268560 ggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtca 10268486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 681
Target Start/End: Original strand, 16789020 - 16789141
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||| |||| ||||||||| |||||||||||||| || |||||| |||||| |||| ||||| |||| ||||| ||||| ||| |||||||  ||||||     
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaaca-cgggacacacctaatt 16789118  T
Q  659 tgagaagtgtctgtgcttcatag 681  Q
    |||| |||||| |||||||||||    
T  16789119 tgaggagtgtccgtgcttcatag 16789141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 519 - 616
Target Start/End: Complemental strand, 25948978 - 25948881
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcgg 616  Q
    |||||||||||| | ||||||||||||| ||||| ||   |||| |||| |||||||||||||||||||||||| || |||||| |||||| ||||||    
T  25948978 ctatgaagcacagacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcgg 25948881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 21479104 - 21479176
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||  |||| |||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtc 21479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 607
Target Start/End: Original strand, 26508099 - 26508166
Alignment:
Q  540 actgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtg 607  Q
    |||||||||| ||||||  |||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  26508099 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 536 - 679
Target Start/End: Original strand, 29508429 - 29508567
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    ||||| |||||| |||| || | |||| |||| ||||||||| |||||||||||||| || | ||||||     |||| |||||| ||||||||||  ||    
T  29508429 ggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg-----atgttggtgtcggacacgacacacgt 29508523  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||||||| | ||||||  ||||||||| |||||||||    
T  29508524 ccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 611 - 682
Target Start/End: Complemental strand, 40993345 - 40993274
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||| ||| ||||||  |||||||||||    
T  40993345 tgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatagg 40993274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 11252025 - 11252095
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||| ||||||||||| || ||| ||| |||||||| ||| ||||||||||||||||||    
T  11252025 tgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 536 - 609
Target Start/End: Original strand, 25775493 - 25775567
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaa-aatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||| |||||  |||| |||| |||| |||||||||||||||||||| ||||||||||||||||    
T  25775493 ggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtc 25775567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 649
Target Start/End: Original strand, 25064895 - 25065005
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||| ||||||||||||||   |||| |||| |||||||||||||||| ||||||| |  | |||| ||| || ||| |||||| |||||||||||||||    
T  25064895 gacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaatt--atgtgttggtatcgtgttggtgtcggacacgacacgtgtc 25064992  T
Q  637 cgacaccgggaca 649  Q
     ||||||||||||    
T  25064993 tgacaccgggaca 25065005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 614
Target Start/End: Original strand, 39756222 - 39756299
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    |||||||||||||||||| || |||| |||| |||||||||||||||| | | ||| |||||||||||||||| ||||    
T  39756222 gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgtgtc 39756299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 616 - 676
Target Start/End: Complemental strand, 16192727 - 16192667
Alignment:
Q  616 gtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| ||||| |||||||    
T  16192727 gtgtcagacacgacacgtgtctgacaccgggacatacctaatatgaggagtgtttgtgctt 16192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 559 - 626
Target Start/End: Original strand, 1509547 - 1509614
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac 626  Q
    |||| |||| |||||||||||||||| ||||||| |||||||||||||||| | |||||||| |||||    
T  1509547 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacac 1509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 26492281 - 26492206
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||| |  |||| |||| ||||||||| | |||||||||||| ||||||| ||||||||    
T  26492281 acggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtc 26492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 51206404 - 51206354
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  51206404 taataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtc 51206354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 615 - 683
Target Start/End: Original strand, 7171554 - 7171622
Alignment:
Q  615 ggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagga 683  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||  || ||||| | ||||||||||||    
T  7171554 ggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatagga 7171622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 679
Target Start/End: Original strand, 13806284 - 13806363
Alignment:
Q  599 gtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||||||||||| ||||||||| |||||| |||| || ||||| |||||||| |||||||| ||| |||||| |||||||||    
T  13806284 gtgtcggtgtcgtgtcggtgttagacacaacacatgaccgaccccgggacacgcctaatccgag-agtgtccgtgcttcat 13806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 8383240 - 8383315
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||| ||||||||||||||   |||| |||| | ||||||| |||||||||||||| || |||||||||||||    
T  8383240 acggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtc 8383315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 521 - 592
Target Start/End: Complemental strand, 29112369 - 29112298
Alignment:
Q  521 atgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    |||||||||  |||||||||||||||||  ||||| | ||||||||| | ||||||| ||||||||||||||    
T  29112369 atgaagcacggatacggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaa 29112298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 631 - 681
Target Start/End: Original strand, 11610578 - 11610628
Alignment:
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||| ||||||| |||||||||||| |||||| |||||||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 537 - 614
Target Start/End: Original strand, 14747547 - 14747625
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaa-aatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||||||||||||||  |||| |||| |||| |||||||||||| ||||||| |||||| ||| ||||| ||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgtc 14747625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 534 - 604
Target Start/End: Complemental strand, 24205117 - 24205047
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    ||||||||||||||||||||||  ||||| |||| | ||||| ||||||| |||||||| || ||||||||    
T  24205117 acggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 615
Target Start/End: Complemental strand, 3164101 - 3164020
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    ||||||| || |||| |||||||  |||| |||| ||||||||||||||||||||||||  |||||||| | |||| |||||    
T  3164101 acggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgtcg 3164020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 627
Target Start/End: Complemental strand, 4991043 - 4990950
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg 627  Q
    ||||| |||||||| |||||||   ||||  ||| | ||||| |||||||||||||||| |||||||||||| ||| ||| ||| |||||||||    
T  4991043 acggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcggcgtcgtgttggtatcagacacg 4990950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 681
Target Start/End: Complemental strand, 14223864 - 14223788
Alignment:
Q  605 gtgtcatgtcggtgtcagacac-gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| |||||||||| ||||| |||||||||||||||  |||||| |||||||||||| ||| ||||||||| ||||    
T  14223864 gtgtcgtgtcggtgtccgacaccgacacgtgtccgacat-gggacacgcctaatctgaggagtttctgtgctttatag 14223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 586
Target Start/End: Original strand, 40052318 - 40052367
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattca 586  Q
    ||||||||||||||||||||  |||| |||| ||||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 3610619 - 3610691
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||| |||||  |||| |||| ||||||| |||||| ||||||||| ||| ||||||| ||||    
T  3610619 gacactgacacgccaacacagttaataatttaaaaaaataacataactcagtgtaattaccagtgtcgttgtc 3610691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 8593155 - 8593195
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  8593155 aaaaaatcacataattcagtataattacaagtgtcggtgtc 8593195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 536 - 592
Target Start/End: Original strand, 14979166 - 14979222
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||| || ||||||||||||  |||| |||| ||||||||||||||||||||||||    
T  14979166 ggacaatggcacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 14979222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 631
Target Start/End: Complemental strand, 16192789 - 16192729
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacac 631  Q
    ||||| |||||||||||||||| || | |||| | |||| |||||||||||||||||||||    
T  16192789 aaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgacac 16192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 538 - 606
Target Start/End: Complemental strand, 21257058 - 21256990
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggt 606  Q
    |||| ||||||  ||||||  |||| |||| |||||||||||||||||||| ||| |||||||||||||    
T  21257058 acaccgacacgatgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 617
Target Start/End: Complemental strand, 22774143 - 22774063
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggt 617  Q
    ||||| |||||| |||||| | |||| |||  | ||| ||||||| |||||||||| || |||||||||||||||||||||    
T  22774143 gacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtcatgtcggt 22774063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 636 - 680
Target Start/End: Original strand, 25211604 - 25211648
Alignment:
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||    
T  25211604 ccgacaccaggacacgcctaatctgagaagtgtttgtgcttcata 25211648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 649
Target Start/End: Original strand, 26290357 - 26290469
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||| | |||| |||| | ||||||||||| ||| || ||| || | ||||| ||||| |  ||||||| || ||| ||| ||||    
T  26290357 gacactgacacgccgacaccattaataatttgagaaaatcacatagttcggtttaattatatgtgtcagtgtcgttccggtgtcggaaacggcacatgtc 26290456  T
Q  637 cgacaccgggaca 649  Q
    ||||||| |||||    
T  26290457 cgacaccaggaca 26290469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 35222924 - 35222996
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||| ||||||||||||||| |||   ||||| |||||||||||||||| ||||| || | |||||||||||    
T  35222924 gacacagacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtc 35222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 536 - 604
Target Start/End: Complemental strand, 35994811 - 35994744
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    ||||| ||||| |||||||||  |||| |||| ||||| |||||||||||||||||| |||||||||||    
T  35994811 ggacaatgacaagccgacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcg 35994744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 682
Target Start/End: Original strand, 40052380 - 40052432
Alignment:
Q  630 acgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||||||| |||||||| ||| |||||  ||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatagg 40052432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 10318110 - 10318036
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||  |||| |||| ||||| ||||||  || ||||||| || |||||||||||||    
T  10318110 acggacactgacacgccgacacagctaataatttgaaaaagtcacat-ttttagtgtaaatataagtgtcggtgtc 10318036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 603
Target Start/End: Original strand, 11610510 - 11610573
Alignment:
Q  540 actgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtc 603  Q
    ||||||||||| ||||   |||| |||| |||||||||||||||||||||||  ||||||||||    
T  11610510 actgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 681
Target Start/End: Original strand, 12083959 - 12084002
Alignment:
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||| |||| ||||||||||||| ||||||||||||||||||    
T  12083959 gacacctggacgtgcctaatctgaggagtgtctgtgcttcatag 12084002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 649
Target Start/End: Complemental strand, 14338494 - 14338455
Alignment:
Q  610 atgtcggtgtcagacacgacacgtgtccgacaccgggaca 649  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  14338494 atgtcggtgtcagacacgacacgtatcggacaccgggaca 14338455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 590
Target Start/End: Complemental strand, 23870650 - 23870579
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgt 590  Q
    |||||||||||  |||||||||| |||||| ||||||   |||| |||| ||||||||| ||||||||||||    
T  23870650 ctatgaagcacggatacggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgt 23870579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 7928458 - 7928508
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||| |||||||||||||||||||||||| || | |||||||||||    
T  7928458 taataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 7928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 657
Target Start/End: Original strand, 11665964 - 11666050
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaat 657  Q
    ||||||||| |||| ||||||| || | ||||||||||| ||| | ||| |||||||||||||||| || | ||| ||| |||||||    
T  11665964 aaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaat 11666050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 17276792 - 17276846
Alignment:
Q  627 gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||||| |||   ||||||| |||||||||| |||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatag 17276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 604 - 681
Target Start/End: Original strand, 21211335 - 21211413
Alignment:
Q  604 ggtgtcatgtcggtgtcagacac-gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||| |||||||||  ||||| ||| |||||||||||| ||||||  ||||||| ||| ||||| ||||||||||||    
T  21211335 ggtgtcgtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 534 - 592
Target Start/End: Original strand, 21720747 - 21720805
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||||||||||||||||||||  ||||| |||| | || ||| |||||||||||||||    
T  21720747 acggacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaa 21720805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 35222987 - 35223057
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| |||| |||||||||| ||||| |||||| || | ||| ||| |||||| |||||||||||    
T  35222987 tgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 609
Target Start/End: Original strand, 38731226 - 38731276
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| ||||||||||||||||||||||||||||  || | |||||||||||    
T  38731226 taataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtc 38731276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 681
Target Start/End: Complemental strand, 27277832 - 27277780
Alignment:
Q  628 acacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||| |||||||| |||||| ||| ||||| ||||||||||||    
T  27277832 acacgtgtccgacac-gggacatgtctaatccgaggagtgtatgtgcttcatag 27277780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 683
Target Start/End: Original strand, 27903702 - 27903759
Alignment:
Q  626 cgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagga 683  Q
    |||| |||||| ||||| ||  ||||||||||| |||||||||| |||||||||||||    
T  27903702 cgacgcgtgtctgacactggatcatgcctaatccgagaagtgtccgtgcttcatagga 27903759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 4e-37; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 543 - 682
Target Start/End: Complemental strand, 24613768 - 24613629
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacac 642  Q
    |||||| |||||||| |||| |||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24613768 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacac 24613669  T
Q  643 cgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    | ||||| | ||||||  || |||||| ||||||||||||    
T  24613668 caggacacgtctaatcctaggagtgtccgtgcttcatagg 24613629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 537 - 682
Target Start/End: Original strand, 19482654 - 19482799
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||||| |||| |||| |||| |||||||||||| |||||| ||||||||| |||||| ||||||| |  |||||||||||||||    
T  19482654 gacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtc 19482753  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||| ||||||  ||||||| ||| |||||  ||||||||||||    
T  19482754 cgacactgggacacacctaatccgaggagtgttcgtgcttcatagg 19482799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 517 - 682
Target Start/End: Complemental strand, 22234984 - 22234818
Alignment:
Q  517 acctatgaagcacaaatacggacactgacacgccgacacaaataattattt-taaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    |||||||||||||  |||||||||| |||||||||||||   |||  ||||  |||||||||||||||||||||||| |  | ||||||||||| |||||    
T  22234984 acctatgaagcacggatacggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcg 22234885  T
Q  616 gtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||| |||||||||||||||||||||| |||||   |||||| |||||||||  ||||||||||||    
T  22234884 gtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatagg 22234818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 571 - 680
Target Start/End: Complemental strand, 30982917 - 30982808
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    ||||||||||| |||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  |  ||||||     
T  30982917 aaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtcc 30982818  T
Q  671 gtgcttcata 680  Q
    ||||||||||    
T  30982817 gtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 536 - 662
Target Start/End: Complemental strand, 27706251 - 27706125
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    ||||||||||||| |||||||| |||| |||| |||||||||||||||| ||||||| |||||||||  ||||| |||   |||| |||||||||||| |    
T  27706251 ggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtat 27706152  T
Q  636 ccgacaccgggacatgcctaatctgag 662  Q
    |||| ||||||||| ||||||||||||    
T  27706151 ccgataccgggacacgcctaatctgag 27706125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 23293062 - 23292926
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||| |||||||||||||||  |||| |||| |||||||||||||||||||| ||| ||||||||||||||||            ||||||||||||    
T  23293062 acggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg-----------gacacgacacgt 23292974  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||| |||||||| ||| |||||| |||||||||||    
T  23292973 gtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 569 - 679
Target Start/End: Original strand, 19312353 - 19312463
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||| ||||||||||| || |||| |||||||| ||||| |||| || |||||||||||||||||||| |||| | ||||||||||||||||    
T  19312353 aaaaaatcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgt 19312452  T
Q  669 ctgtgcttcat 679  Q
    | ||| |||||    
T  19312453 ccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 537 - 680
Target Start/End: Complemental strand, 3947839 - 3947702
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||| |||| |||||||||  |||| |||| |||||||| ||||||||||||||| |||||||||| |||||      ||||| |||||||||||||||    
T  3947839 gacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtc------gtgtcggacacgacacgtgtc 3947746  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    ||||||| |||||  ||||||| ||| |||||| ||||||||||    
T  3947745 cgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 5414248 - 5414101
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||| ||||||||||||||  ||||| ||||| ||||||||| ||| |||||||| || | || |||||||| |||| ||||| ||||||||||||    
T  5414248 acggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgt 5414149  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||| ||||| ||||||  ||| |||  || |||||| |||||||||||    
T  5414148 gtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 570 - 681
Target Start/End: Original strand, 47264005 - 47264116
Alignment:
Q  570 aaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtc 669  Q
    |||||||||||||||| |||||| ||||| ||||| |||||||| ||||||||| ||||||| |||| |||||| ||||| |||||||| ||  || |||    
T  47264005 aaaaatcacataattctgtgtaattacaaatgtcgatgtcatgttggtgtcagatacgacacatgtctgacaccaggacacgcctaatccgaagagcgtc 47264104  T
Q  670 tgtgcttcatag 681  Q
    ||||||||||||    
T  47264105 tgtgcttcatag 47264116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 521 - 631
Target Start/End: Original strand, 4383338 - 4383447
Alignment:
Q  521 atgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtc 620  Q
    |||||||||  ||||||||||||||||| ||| |||| |||| |||| |||| ||||||||||||||||||| ||||| |||| ||||| ||||||||||    
T  4383338 atgaagcacggatacggacactgacacgtcgatacaactaataatttgaaaa-atcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtc 4383436  T
Q  621 agacacgacac 631  Q
    | |||||||||    
T  4383437 aaacacgacac 4383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 535 - 681
Target Start/End: Original strand, 36635308 - 36635449
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtg 634  Q
    |||||||||||||||| |||| | |||| |||| | |||||||||||||||||||||| || | ||||  |||| |     ||||||||||||||||| |    
T  36635308 cggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgtga-----gtgtcagacacgacacgcg 36635402  T
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || |||||||||||| |||||||| ||  |||||| |||||||||||    
T  36635403 tcagacaccgggacacgcctaatccgaagagtgtccgtgcttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 24343490 - 24343632
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac-gacacg 632  Q
    |||||| | |||||||||||||  ||||| |||| | ||||| |||||||||||||||| || | ||||||      |||||||||| ||||| ||| ||    
T  24343490 acggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcg------tgtcggtgtccgacaccgacgcg 24343583  T
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||||| ||||| |||||| |||||| |||||||||||    
T  24343584 tgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 602
Target Start/End: Complemental strand, 11651212 - 11651142
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgt 602  Q
    ||||||||||||||||| |||||||  |||| |||| ||||||||||||||||||||| ||||||||||||    
T  11651212 atacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 11651142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 679
Target Start/End: Complemental strand, 28000794 - 28000672
Alignment:
Q  559 taattattttaaaa-aatcacataattcagtgtaactacaagtgtcggtgtcatgtc-ggtgtcagacacgacacgtgtccgacaccgggacatgcctaa 656  Q
    |||| ||||||||| ||||| |||||||||||||| |||||||||||||||||||||  ||||    ||||||||||||| ||||||| ||||  |||||    
T  28000794 taataattttaaaataatcatataattcagtgtaattacaagtgtcggtgtcatgtcaagtgttgttcacgacacgtgtctgacaccgagacacacctaa 28000695  T
Q  657 tctgagaagtgtctgtgcttcat 679  Q
    |||||  |||||| |||||||||    
T  28000694 tctgatgagtgtccgtgcttcat 28000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 35158061 - 35157925
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||| ||| |||| ||||  ||||||||||||||| ||||||| || |||||||||           |||| |||||||||| |    
T  35158061 acggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcgg-----------tgtctgacacgacacat 35157973  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||| ||||||| ||| || ||||| |||||||||| |||||||||||    
T  35157972 gtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 569 - 681
Target Start/End: Complemental strand, 715648 - 715545
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||         ||||||||| |||||||||| |||||| |||||||| ||| |||||    
T  715648 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgt 715558  T
Q  669 ctgtgcttcatag 681  Q
    | |||||||||||    
T  715557 ccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 569 - 681
Target Start/End: Complemental strand, 752974 - 752871
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||         ||||||||| |||||||||| |||||| |||||||| ||| |||||    
T  752974 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgt 752884  T
Q  669 ctgtgcttcatag 681  Q
    | |||||||||||    
T  752883 ccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 21945489 - 21945561
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||| |||||||||  |||| |||| ||||||| |||||||||||||||| ||||||||||||||||    
T  21945489 gacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 21945561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 30298929 - 30299005
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaa-tcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||  |||| |||| |||||| | |||||||||||||||| ||||||||||||||||    
T  30298929 acggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 30299005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 30327797 - 30327873
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaa-tcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||  |||| |||| |||||| | |||||||||||||||| ||||||||||||||||    
T  30327797 acggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 30327873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 644
Target Start/End: Original strand, 40481623 - 40481723
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||||||||||| |||| |||| |||| |||| ||||||||||||||||||| |||||      |||| ||||||||||  |||||||||||||||    
T  40481623 gacactgacacgccgatacaactaataatttgaaaa-atcacataattcagtgtaattacaa------gtgttatgtcggtgttggacacgacacgtgtc 40481715  T
Q  637 cgacaccg 644  Q
    ||||||||    
T  40481716 cgacaccg 40481723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 680
Target Start/End: Original strand, 847937 - 848080
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||  |   |||| |||| | ||||| |||||||||| | ||| |||||||||||||||| ||| |||||| ||||||| |||||||    
T  847937 gacactgacacgccgatgccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtc 848036  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
      |||||||||||  |||||||  || |||||| ||| ||||||    
T  848037 gaacaccgggacacacctaatccaaggagtgtccgtgtttcata 848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 610 - 681
Target Start/End: Complemental strand, 8423729 - 8423658
Alignment:
Q  610 atgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||| |||||||||  ||||||||||||||||| |||||||| |||||||||| |||| ||||||    
T  8423729 atgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 12797413 - 12797339
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||| || || |||| |||| ||||| |||||||||||||||||| ||||||||||||||||    
T  12797413 acggacactgacacgccggcaaaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 12797339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 609
Target Start/End: Complemental strand, 12895342 - 12895275
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||| |||| ||||||||||||||||  |||||| || |||||||||||||    
T  12895342 tgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtc 12895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 541 - 678
Target Start/End: Original strand, 28084511 - 28084640
Alignment:
Q  541 ctgacacgccgacacaaataattattttaaaa-aatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccga 639  Q
    ||||||||||||||||  |||  |||| |||| |||||||||||||| ||||| |||||||||| ||||| |||||||         |||||||||||||    
T  28084511 ctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggt---------gacacgtgtccga 28084601  T
Q  640 caccgggacatgcctaatctgagaagtgtctgtgcttca 678  Q
    ||| |||||| |||||||| ||| |||||| ||||||||    
T  28084602 cactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 34306814 - 34306744
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||||||||| | |||  |||||||||||    
T  34306814 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 654
Target Start/End: Original strand, 37496665 - 37496807
Alignment:
Q  517 acctatgaagcacaaatacggaca-----ctgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcat 611  Q
    |||||||||||||||| |||||||     ||||||||  |||||  |||||| ||| | ||||| |||||||||| |||||  ||||||||||||||  |    
T  37496665 acctatgaagcacaaacacggacacgacactgacacgttgacaccgataattttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgttgt 37496764  T
Q  612 gtcggtgtcagacacgacacgtgtccgacaccgggacatgcct 654  Q
    |||| || | |||||||||| |||| |||||||||||| ||||    
T  37496765 gtcgttgccggacacgacacatgtcggacaccgggacacgcct 37496807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 609
Target Start/End: Complemental strand, 16303344 - 16303267
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||||| | |||||  ||| ||||||| | |||||| ||||||| ||||||||||||||||    
T  16303344 atacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtc 16303267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 616 - 680
Target Start/End: Complemental strand, 14465070 - 14465006
Alignment:
Q  616 gtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||||||||||||||||||| |||||| |||||| | |||||||||| |||||| ||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 609
Target Start/End: Original strand, 49431009 - 49431084
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaa-aatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||| |||||||||||||||  |||| |||| |||| |||||||||||||||||||| || |||||||||||||    
T  49431009 cggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtc 49431084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 609
Target Start/End: Complemental strand, 54580087 - 54580024
Alignment:
Q  546 acgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| ||||||| |||| |||| |||||||||||||||||||||||| || |||||||||||||    
T  54580087 acgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 54580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 608
Target Start/End: Complemental strand, 6485687 - 6485613
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgt 608  Q
    ||||||||  |||||| |||| || |||| |||| |||||||||||||||| ||||||| |||||||||||||||    
T  6485687 acggacacctacacgcagacaaaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 537 - 614
Target Start/End: Original strand, 12708132 - 12708210
Alignment:
Q  537 gacactgacacgccgacacaaataattatttt-aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    ||||||||||||| ||||||| |||| ||||| ||||||| | |||||||||||||| ||||||||||| |||| ||||    
T  12708132 gacactgacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtgtcgatgtcgtgtc 12708210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 616
Target Start/End: Complemental strand, 12895191 - 12895110
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcgg 616  Q
    |||||||| |||||||||| |||  |||| |||| ||||||||||||||||||  |||| |||||||||||||||| ||||||    
T  12895191 acggacac-gacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcgg 12895110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 676
Target Start/End: Original strand, 30838193 - 30838335
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||| ||| ||| ||   |||| |||| | ||||| | |||||| ||||||| || |||| |||||||| |||| ||||| ||| ||||||||    
T  30838193 acggacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgt 30838292  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    ||||||||||  |||| |||||| | ||| |||||| ||||||    
T  30838293 gtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 681
Target Start/End: Complemental strand, 46084081 - 46083920
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtg 618  Q
    ||||||||||   |||||||||| ||||| | ||||||  ||||| |||||  ||||||||||||  ||||||| || | ||||||||||| |||| ||     
T  46084081 ctatgaagcatggatacggacacggacac-cggacacagctaattgttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagta 46083983  T
Q  619 tcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || ||||||||||||||| ||| | |||||| |||| ||  ||| ||||||  ||||||||||    
T  46083982 tcggacacgacacgtgtctgacgcggggacacgccttataagaggagtgtccatgcttcatag 46083920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 537 - 614
Target Start/End: Complemental strand, 11596425 - 11596348
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtc 614  Q
    |||||||| ||||| ||| |  |||| |||| |||||||||||||||||||||||| ||||||||| |||||| ||||    
T  11596425 gacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 11596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 536 - 609
Target Start/End: Original strand, 16073380 - 16073452
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||||||||| |||||| |||| |||| ||||| || ||||||||||||||| ||||||||||||||||    
T  16073380 ggactctgacacgccaacacaagtaataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcggtgtc 16073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 29205452 - 29205501
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgt 608  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||    
T  29205452 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 7012049 - 7012197
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagaca-cgacacg 632  Q
    |||||||| |||||||||||||  ||||| |||| | ||||| |||||||||||||| |  | | || |||||||  |||||||||| |||| |||| ||    
T  7012049 acggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggacaccgacgcg 7012148  T
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    | ||||||||||||  |  ||||||  ||| |||||| |||||||||||    
T  7012149 tatccgacaccggggaacacctaatgcgaggagtgtccgtgcttcatag 7012197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 682
Target Start/End: Original strand, 35161096 - 35161156
Alignment:
Q  622 gacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||||||||||| |||  ||||||| || ||||||| ||||||||||||    
T  35161096 gacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatagg 35161156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 42640547 - 42640587
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  42640547 aaaaaatcacataattcagtgtaattacaagtgtcggtgtc 42640587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 534 - 649
Target Start/End: Original strand, 903905 - 904020
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||| ||| |||   |||| |||| | |||||||||||||||||||||| || | || || || || | |||||||  ||||||||| ||    
T  903905 acggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgt 904004  T
Q  634 gtccgacaccgggaca 649  Q
    ||||||||| ||||||    
T  904005 gtccgacactgggaca 904020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 537 - 681
Target Start/End: Original strand, 15029751 - 15029890
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||| |||||   |||| |||| |||| ||||||||||||||||||| || | |||| ||||||  ||||| |||||||| |||||    |    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtc-ggtcggcgtcagacatgacac----c 15029845  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||  ||||||||||||| ||| |||  | |||||||||||    
T  15029846 cgacaccaagacatgcctaatccgaggagtacccgtgcttcatag 15029890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 610 - 681
Target Start/End: Complemental strand, 21345544 - 21345473
Alignment:
Q  610 atgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||||||| || | ||| ||||||| |||||||||||| ||| ||| | ||||||||||||    
T  21345544 atgtcggtgtcagacacgatacatatccaacaccggtacatgcctaatccgaggagtatgtgtgcttcatag 21345473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 537 - 607
Target Start/End: Original strand, 24543967 - 24544038
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaat-cacataattcagtgtaactacaagtgtcggtg 607  Q
    ||||||||||||||||||||| |||| |||| ||||||| ||| |||| || ||||| ||||||||||||||    
T  24543967 gacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcggtg 24544038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 2361985 - 2361915
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| |||||||| |||||| ||||||| ||||  ||||||||||  |||||| |||||||||||    
T  2361985 tgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 682
Target Start/End: Complemental strand, 18513224 - 18513174
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||| ||||| |||||||||||| |||||| ||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatagg 18513174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 28964299 - 28964249
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||| |||||||||||||||||||||||| |||||||||| |||||    
T  28964299 taataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtc 28964249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 34306882 - 34306805
Alignment:
Q  531 aatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||| |||||||| |||||||||||| |||| |||| ||||| ||| |||||  ||||||| ||||||||||||||||    
T  34306882 aatacagacactgatacgccgacacaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtc 34306805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 633
Target Start/End: Original strand, 51701266 - 51701340
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||| |||| ||||||| |||||||| ||||||| |||||||||  ||||| ||||||||||  |||||||||||    
T  51701266 taataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaacacgacacgt 51701340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 633 - 682
Target Start/End: Complemental strand, 11596345 - 11596296
Alignment:
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||| ||||||| |||||||||||| |||||| ||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatagg 11596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 681
Target Start/End: Original strand, 11931298 - 11931410
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagaca-cgacacgtgtccgacaccgggacatgcctaatctgagaagtg 667  Q
    |||||||||||||||| ||||||| || | |||||| |||||||||||| || |||| |||| | ||||||||||| |||||  |||||||   | ||||    
T  11931298 aaaaaatcacataatttagtgtaaatatatgtgtcgatgtcatgtcggtatc-gacaccgacgcatgtccgacaccaggacacacctaatccatggagtg 11931396  T
Q  668 tctgtgcttcatag 681  Q
    || |||||||||||    
T  11931397 tccgtgcttcatag 11931410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 645
Target Start/End: Complemental strand, 20743350 - 20743242
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc-atgtcggtgtcagaca-cgacacgtgt 635  Q
    ||||||||||||||||||  ||||| |||| | ||||| ||||||||||||||||  | | ||||  |||||  ||||| ||||||||| ||||||||||    
T  20743350 acactgacacgccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgt-tgtgtcggtgtcgatgtcagacaccgacacgtgt 20743252  T
Q  636 ccgacaccgg 645  Q
    ||||||||||    
T  20743251 ccgacaccgg 20743242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 627
Target Start/End: Original strand, 40742574 - 40742667
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg 627  Q
    ||||||| ||| |||||||||| | |||| |||| | ||||||| |||||  ||||||| || | |||||| |||| |||||||||||||||||    
T  40742574 acggacattgaaacgccgacaccattaataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcggtgtcagacacg 40742667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 631 - 683
Target Start/End: Complemental strand, 944652 - 944600
Alignment:
Q  631 cgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagga 683  Q
    |||||||||||||||||||  ||||||||||| ||| |||| |||||||||||    
T  944652 cgtgtccgacaccgggacacacctaatctgaggagtctctgagcttcatagga 944600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 537 - 609
Target Start/End: Complemental strand, 2362048 - 2361976
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| |||||| ||||||||  |||| |||| ||||||| |||||||| ||||||| || |||||||||||||    
T  2362048 gacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtc 2361976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 611 - 679
Target Start/End: Original strand, 4157198 - 4157266
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||| |||||||||| |||||||||||| || |  ||||||  ||| ||||||||||||||||    
T  4157198 tgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 611 - 679
Target Start/End: Original strand, 4157485 - 4157553
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||| |||||||||| |||||||||||| || | |||||||  ||| ||||||| ||||||||    
T  4157485 tgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 601 - 681
Target Start/End: Complemental strand, 15724563 - 15724483
Alignment:
Q  601 gtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||| |||||||||| ||||| ||||||||| ||||||   ||| |||||||| ||| ||| | ||||||||||||    
T  15724563 gtcggtgtcgtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatccgaggagtttatgtgcttcatag 15724483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 611 - 682
Target Start/End: Complemental strand, 53381601 - 53381529
Alignment:
Q  611 tgtcggtgtcagacac-gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||| ||||| ||| ||| |||||||||||||||  ||||||| ||| |||||| ||||||||||||    
T  53381601 tgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 53381529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 633 - 680
Target Start/End: Complemental strand, 5922579 - 5922532
Alignment:
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||||||||| |||||| |||||||||||| ||||||| |||||||||    
T  5922579 tgtccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 570 - 609
Target Start/End: Complemental strand, 6879505 - 6879466
Alignment:
Q  570 aaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  6879505 aaaaatcacataattaagtgtaattacaagtgtcggtgtc 6879466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 681
Target Start/End: Original strand, 18966569 - 18966628
Alignment:
Q  622 gacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| |||||||||||||| ||||| | ||||||||| || |||||| |||||||||||    
T  18966569 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatag 18966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 681
Target Start/End: Original strand, 29205528 - 29205587
Alignment:
Q  622 gacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| |||||||||| |||||| |||||||| ||| |||||  |||||||||||    
T  29205528 gacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 681
Target Start/End: Original strand, 37203324 - 37203371
Alignment:
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||||||| | |||||| |||||||||| |||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatag 37203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 40179712 - 40179637
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||  ||||| | ||||  ||| |||||||||||||||||||||||| || | | |||||||||    
T  40179712 acggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtc 40179637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 630 - 676
Target Start/End: Complemental strand, 3712504 - 3712458
Alignment:
Q  630 acgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    |||||||||||||||||||| | |||||||||| |||||| ||||||    
T  3712504 acgtgtccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 599 - 681
Target Start/End: Complemental strand, 5225624 - 5225542
Alignment:
Q  599 gtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||| ||| |||||| ||||||| || | || ||| |||||||| |||||||||  | ||| ||||||||||||||    
T  5225624 gtgtcggtgtcgtgttggtgtcggacacgatacatatcggaccccgggacacgcctaatctatggagtatctgtgcttcatag 5225542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 7214523 - 7214465
Alignment:
Q  624 cacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||| ||||||||||||||| |||||||||| ||  | ||| |||||||||||||    
T  7214523 cacgacacatgtccgacaccgggaaatgcctaatccgatgattgtttgtgcttcatagg 7214465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 615 - 681
Target Start/End: Original strand, 16886660 - 16886726
Alignment:
Q  615 ggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||| ||||||| ||| |||||||||||||| ||| | ||||||| ||||||||| |||||| ||||    
T  16886660 ggtgacagacactacatgtgtccgacaccggaacacggctaatctcagaagtgtccgtgcttgatag 16886726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 543 - 609
Target Start/End: Complemental strand, 38847079 - 38847013
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||| ||||||||  |||| |||| ||||||||| || ||||||||||| |||||||||| |||||    
T  38847079 gacactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtc 38847013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 615
Target Start/End: Complemental strand, 5775418 - 5775353
Alignment:
Q  550 cgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    |||||| | |||| |||| | |||||||||||||| ||||||| || | |||||||||||||||||    
T  5775418 cgacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtcatgtcg 5775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 633 - 682
Target Start/End: Original strand, 16184902 - 16184951
Alignment:
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||| |||||| |||||||| ||| ||||| |||||||||||||    
T  16184902 tgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatagg 16184951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 632 - 677
Target Start/End: Complemental strand, 34594253 - 34594208
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttc 677  Q
    ||||| ||||| |||||||||||||| |||||||||| ||||||||    
T  34594253 gtgtctgacacagggacatgcctaatatgagaagtgtatgtgcttc 34594208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 668
Target Start/End: Complemental strand, 38148764 - 38148667
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||||||||| |  || ||||| |||| ||| |||||  |||||||||||| || ||||| || ||| ||||| ||  ||||||||    
T  38148764 aaaatcacataattcagtgtaattttaaatgtcgatgtcgtgttggtgttggacacgacacgtatctgacactggaacacgcctattcgaagaagtgt 38148667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 615
Target Start/End: Original strand, 50280867 - 50280947
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattca--gtgtaactacaagtgtcggtgtcatgtcg 615  Q
    ||||| ||||||||||||||  |||| |||| ||||| |||||||||| |  |||||| |||||||| ||||||| |||||    
T  50280867 gacacggacacgccgacacagctaataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcgtgtcg 50280947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 7e-36; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 536 - 681
Target Start/End: Complemental strand, 11223937 - 11223793
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    |||||| ||||||| ||||||  ||||  ||| ||||||| |||||||||||||||| |||||||||||||||||||| |||||| |||||||||| |||    
T  11223937 ggacacagacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgt 11223839  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    | |||||||||||| |||||||||||| |||||| |||||||||||    
T  11223838 ctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 537 - 681
Target Start/End: Original strand, 26769497 - 26769641
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||| ||||||||||||||| |||| |||| |||| ||||||| ||   |||||| |||||||||||||||||||||||| || |||||||||||||||    
T  26769497 gacacagacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtc 26769596  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||| |||||| |||||||| ||| |||||| |||||||||||    
T  26769597 cgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 535 - 682
Target Start/End: Original strand, 37419727 - 37419874
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtg 634  Q
    ||||||||||||||||||||     ||| |||| ||||||||||| |||||||||||| |||||||| ||||||| |||||||||| |||||||  ||||    
T  37419727 cggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtg 37419826  T
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||||||||| |||||||| ||| |||||| ||||||||||||    
T  37419827 tccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 37419874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 34785058 - 34784911
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||| || | ||||||||||| ||||||| || |||||||||| |    
T  34785058 acggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacct 34784959  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||| ||||| |||||| |||| ||  ||| ||||||||||||||||||    
T  34784958 gtctgacacggggacacgccttattcgaggagtgtctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 30717606 - 30717459
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||  |||||| |  |||| |||| |||||||||||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||    
T  30717606 acggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgt 30717507  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || |||||| |||| | ||||||||  || |||||| |||||||||||    
T  30717506 gttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 534 - 679
Target Start/End: Original strand, 15657847 - 15657992
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||| |||||||||| ||| |||| ||||  ||||||||||||||||||||||| ||||| |||||||||| ||| | |||| ||| ||||||||    
T  15657847 acggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgt 15657946  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||||||| |||||||| ||||| || ||| ||||||  ||||||||    
T  15657947 gtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 534 - 681
Target Start/End: Complemental strand, 30404926 - 30404790
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||||||||||||   |||| |||| |||||||||||||||||||||||| ||||||||           |||| ||| |||||||||| |    
T  30404926 acggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtg-----------tcggcgtcggacacgacacat 30404838  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| ||||||||||||||||||||| || ||||||||||||    
T  30404837 gtccgacaccaggacatgcctaatctgagaagcgtttgtgcttcatag 30404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 681
Target Start/End: Original strand, 27084229 - 27084388
Alignment:
Q  518 cctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggt 617  Q
    ||||||||||||  |||||||||| ||||| |||||||   |||| |||| | ||||||| |||||||| ||||     |||||||| | ||||||||||    
T  27084229 cctatgaagcacggatacggacacggacactccgacactgctaataatttgagaaaatcatataattcaatgtat----aagtgtcgatttcatgtcggt 27084324  T
Q  618 gtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||| |||||||||||||||| |||||| |||| |||||||| ||| ||||||| ||||||||||    
T  27084325 gtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatag 27084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 579 - 681
Target Start/End: Original strand, 35056896 - 35056998
Alignment:
Q  579 ataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttca 678  Q
    |||||||||||||| || | ||||||||||| |||||||||| ||||||||||||||||||||| |  ||| |||||||||||| |||||| ||||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttca 35056995  T
Q  679 tag 681  Q
    |||    
T  35056996 tag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 537 - 679
Target Start/End: Complemental strand, 36756417 - 36756275
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||||||| |||||||| |||| |||| || |||| |||||||||||||||| || ||||||||||||| |||  |||||  |||| |||| ||||    
T  36756417 gacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtc 36756318  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||||||||  ||| ||||||||  || ||||||||||||||||    
T  36756317 cgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 532 - 680
Target Start/End: Complemental strand, 27286370 - 27286222
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacac 631  Q
    ||||||||||||| |||||||||    |||| |||| | || ||||||||||| ||||||| || | |||||  |||||||||| |||| ||||||||||    
T  27286370 atacggacactgatacgccgacaacgctaataatttgataagatcacataattaagtgtaattataggtgtcaatgtcatgtcgatgtcggacacgacac 27286271  T
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
     ||||||||||||||||||  ||||||| |  |||||||||||||||||    
T  27286270 atgtccgacaccgggacatatctaatctaaagagtgtctgtgcttcata 27286222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 18421946 - 18422021
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| |||| |||| |||| ||||||||||||||||||| ||||||||||||||||    
T  18421946 acggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtc 18422021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 536 - 681
Target Start/End: Complemental strand, 18841087 - 18840953
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    |||||||||||||| ||||||| |||| |||| ||||||| |||||||| ||||||| |||||||||||||||||           |||||||||| |||    
T  18841087 ggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtca-----------gacacgacacatgt 18840999  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||  ||||||| ||| |||||| |||||||||||    
T  18840998 ccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 15972856 - 15972931
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| |||| |||| ||||||| ||| |||||||||||| ||||||||||||||||    
T  15972856 acggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtc 15972931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 527 - 681
Target Start/End: Complemental strand, 12668506 - 12668352
Alignment:
Q  527 cacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac 626  Q
    |||||| || || ||||||||||||||| || |||| |||| ||||||| |||||||||||||||| || ||||||||||||| ||||||| |  || ||    
T  12668506 cacaaacacagatactgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcggtattggatac 12668407  T
Q  627 gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||| || ||||  ||||||  ||||||  ||| ||| || |||||||||||    
T  12668406 gacacgtatctgacattgggacacacctaattcgaggagtatccgtgcttcatag 12668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 20242801 - 20242728
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| || | |||||||||||    
T  20242801 ggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtc 20242728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 2438793 - 2438661
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||  || ||||||  |||| |||| |||||||||||||||||||||||| ||||||||||||||||            |||||||||| |    
T  2438793 acggacactgac--gctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg-----------gacacgacacat 2438707  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||||||||| |||||||| ||| |||||| |||||||||    
T  2438706 gtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 19536474 - 19536398
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaa-tcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||| |||||||||||||||| |||| |||| |||||| |||||||||||||||||| ||||||||||||||||    
T  19536474 acggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 19536398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 676
Target Start/End: Complemental strand, 23058519 - 23058389
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaa-tcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacg 632  Q
    ||||||| ||||||||| |||||| |||| |||| |||||| ||||||||| |||||||| |||||||||||||||| |||||||||                 
T  23058519 acggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgt------------- 23058433  T
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||    
T  23058432 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 37558960 - 37559035
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||  |||| ||||  ||||||||||||||||| ||||| ||||||||||||||||    
T  37558960 acggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtc 37559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 681
Target Start/End: Complemental strand, 21782890 - 21782744
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaacta----caagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||||||||   |||| |||| | |||||||||||||||||||||| ||    |  |||||| |||  ||| |||||||| ||||||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattatgtgccggtgtcg-tgttgtgttggtgtcaggcacgacacgt 21782792  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||| ||||||||||| | |||||||| | |||||| |||||||||||    
T  21782791 gtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 537 - 681
Target Start/End: Complemental strand, 38117232 - 38117099
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||||||||||||||||||  |||| |||| ||||||||||||| ||| |||||| ||||||           ||| |||||| ||||| |||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaag-----------tgttggtgtcggacacaacacgtgtc 38117144  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||| |||||||| |||  ||||| |||||||||||    
T  38117143 cgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 559 - 628
Target Start/End: Complemental strand, 4882747 - 4882678
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacga 628  Q
    ||||||||| ||||||| | |||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  4882747 taattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacga 4882678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 534 - 639
Target Start/End: Complemental strand, 34337252 - 34337152
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||| |||||||||||||||  | || |||| ||||||||||||||||     ||| |||||||||||||||| |||||||||| ||||| ||||||    
T  34337252 acggacattgacacgccgacacagttgataatttgaaaaaatcacataatt-----taattacaagtgtcggtgtcctgtcggtgtcggacacaacacgt 34337158  T
Q  634 gtccga 639  Q
    ||||||    
T  34337157 gtccga 34337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 537 - 654
Target Start/End: Complemental strand, 36096448 - 36096331
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    ||||| ||||||||||||||  ||| | ||||| ||||||||| ||| |||||||| || |  |||||||||| ||||| |||| |||||||||||||||    
T  36096448 gacacggacacgccgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtc 36096349  T
Q  637 cgacaccgggacatgcct 654  Q
     ||||| |||||| ||||    
T  36096348 tgacacggggacacgcct 36096331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 571 - 680
Target Start/End: Original strand, 44860340 - 44860449
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    |||||| ||||||||||||||| || | ||||||||||| ||| |||||  ||||||||| |||||||||| |||||||  ||||||  ||| ||||||     
T  44860340 aaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtcc 44860439  T
Q  671 gtgcttcata 680  Q
    ||||||||||    
T  44860440 gtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 606
Target Start/End: Original strand, 6940238 - 6940310
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggt 606  Q
    |||||||||||||||||||||||  |||| |||||||||| | |||||||| ||||||| |||||||||||||    
T  6940238 acggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggt 6940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 41843424 - 41843565
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||||||||||| || ||| | |||||  |||||||||||||| || ||| || | ||||||||||  ||||||      || ||||||||    
T  41843424 acggacactgacacgccgacaaaactaaattttttaggaaatcacataattcggtataattatatgtgtcggtgttgtgtcgg------acgcgacacgt 41843517  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||| |||||| || | ||| ||| ||||||||||||||||||    
T  41843518 gtccgacacggggacacgctttatccgaggagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 20539750 - 20539675
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||| |||||||  |||| |||| ||||||||| |||||| ||||||| ||||||||||||||||    
T  20539750 acggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 20539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 534 - 616
Target Start/End: Original strand, 24894372 - 24894454
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcgg 616  Q
    |||||||||||||||||||||||  |||| |||| ||||||||||||||||||||| || || |||||| ||| || ||||||    
T  24894372 acggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgtgtcgg 24894454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 579 - 681
Target Start/End: Complemental strand, 24975356 - 24975255
Alignment:
Q  579 ataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttca 678  Q
    |||||||||||||| || | | ||||||||| |||| ||||||||||| ||| ||||||||||| ||||||   |||||||||| |||||| ||||||||    
T  24975356 ataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagacac-acatgtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttca 24975258  T
Q  679 tag 681  Q
    |||    
T  24975257 tag 24975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 32749864 - 32749754
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    ||||||||||||||||||||||  | ||||||| ||||| ||||| |||| |||  |||| ||||||||||| |||||| |||| |||| || ||||||     
T  32749864 aaaatcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtcc 32749765  T
Q  671 gtgcttcatag 681  Q
    | |||||||||    
T  32749764 gcgcttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 669
Target Start/End: Complemental strand, 14996300 - 14996171
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaa-tcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacg 632  Q
    ||||||||||||| |||||||||  |||| |||| |||||| ||| |||||| ||||||| |||||||||||||||| |||||      ||||| |||||    
T  14996300 acggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtcttgtcg------gacac-acacg 14996208  T
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtc 669  Q
    |||| |||||||| ||| |||||||| ||| ||||||    
T  14996207 tgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 681
Target Start/End: Complemental strand, 18420504 - 18420363
Alignment:
Q  540 actgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccga 639  Q
    ||||||||||| ||||   |||| |||| | |||||||||||||||| || || || ||||||||||||  ||||  |||| |||| |||| |||| |||    
T  18420504 actgacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatgacaagtgttcga 18420405  T
Q  640 caccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||    |||| |||||||| ||||||||||||||||||||||    
T  18420404 cattatgacacgcctaatccgagaagtgtctgtgcttcatag 18420363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 603
Target Start/End: Complemental strand, 21374775 - 21374706
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtc 603  Q
    ||||||||| |||||||||||||  |||| |||| ||||||| |||||||||||||||| ||||||||||    
T  21374775 acggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 21624252 - 21624325
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatca-cataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||||||||  |||| |||||||||||  | ||||||||||||||| ||||||||||||||||    
T  21624252 gacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtc 21624325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 572 - 669
Target Start/End: Original strand, 28524447 - 28524544
Alignment:
Q  572 aaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtc 669  Q
    ||||||||||||||||||||| || | |||||| |||  ||| |||||| ||||| ||||||||| ||||| |  ||| |||||||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgacacagaaacacgcctaatctgagaagtgtc 28524544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 33153415 - 33153488
Alignment:
Q  542 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    ||||||||||| |||  |||| |||| |||||||||||||||||||||||| |||||||||| ||||| |||||    
T  33153415 tgacacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgtgtcg 33153488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 537 - 609
Target Start/End: Original strand, 20473308 - 20473380
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||| |||||||||| |||| |||| ||||| ||| |||||||||||||| ||||||||||| ||||    
T  20473308 gacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtc 20473380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 537 - 685
Target Start/End: Original strand, 28677895 - 28678037
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||  ||||||||||   |||| |||| |||||||||||||||||||||||| || | || ||||||||     ||||||| |||||||| |||||    
T  28677895 gacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt-tcggtgtc-----ggtgtcaaacacgacaagtgtc 28677988  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcataggata 685  Q
    |||||| |||||| | || | | ||| ||||||| ||||||||||||||    
T  28677989 cgacacagggacacggctgaccggaggagtgtctatgcttcataggata 28678037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 682
Target Start/End: Original strand, 30335400 - 30335536
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||  ||||||||||||| |||| |||| ||||||| |||||||| ||||||| ||||| ||||||||||            ||||  |||| |    
T  30335400 acggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtc------------gacataacacat 30335487  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    || |||||| |||| |||||||||||||||| ||| |||||||||||||    
T  30335488 gttcgacactgggatatgcctaatctgagaaatgtatgtgcttcatagg 30335536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 604
Target Start/End: Complemental strand, 12941011 - 12940941
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcg 604  Q
    |||||||||||||||  ||||||| |||| |||| ||||||||| |||||||||||||| ||||| |||||    
T  12941011 acggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 632 - 681
Target Start/End: Original strand, 12748737 - 12748786
Alignment:
Q  632 gtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  12748737 gtgtcggacaccgggacatgcctaatttgaggagtgtctgtgcttcatag 12748786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 611 - 680
Target Start/End: Original strand, 28596518 - 28596587
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||||||||| |||||||||||||||||||||  |||||  ||||||| ||| |||||| ||||||||||    
T  28596518 tgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 611 - 682
Target Start/End: Original strand, 37497169 - 37497241
Alignment:
Q  611 tgtcggtgtcagacac-gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||| ||||| ||| || |||||||||||| ||||||  ||||||||| ||||||||||||    
T  37497169 tgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcatagg 37497241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 550 - 609
Target Start/End: Original strand, 974746 - 974805
Alignment:
Q  550 cgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||| |||| |||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtc 974805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 532 - 598
Target Start/End: Complemental strand, 29367448 - 29367381
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaa-tcacataattcagtgtaactacaa 598  Q
    |||| ||||| ||||||||| ||||| |||| ||||||||||| |||||||||||||||||| |||||    
T  29367448 atacagacacggacacgccggcacaattaataattttaaaaaaatcacataattcagtgtaattacaa 29367381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 534 - 592
Target Start/End: Complemental strand, 16069330 - 16069272
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||||||||||||||||||||   |||| |||| ||||||||| ||||||||||||||    
T  16069330 acggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaa 16069272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 611 - 681
Target Start/End: Original strand, 24009344 - 24009414
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| ||||||||||||||| ||||| |||||| |||| |||  || |||||| |||||||||||    
T  24009344 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 676
Target Start/End: Original strand, 12224272 - 12224337
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgctt 676  Q
    |||||||||| ||||||| ||||||||||||| |||||| ||||||||  || ||||| |||||||    
T  12224272 tgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgtttgtgctt 12224337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 620 - 681
Target Start/End: Complemental strand, 15907912 - 15907851
Alignment:
Q  620 cagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||||| | ||||||||||||||| ||| |||||||  |||||| |||||||||||    
T  15907912 cagacacgacacatatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatag 15907851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 616 - 681
Target Start/End: Complemental strand, 42511387 - 42511322
Alignment:
Q  616 gtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||| ||||| ||||||||||||||| |||||| | |||||| ||| |||||| |||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 5040752 - 5040792
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  5040752 aaaaaatcacataattcaatgtaattacaagtgtcggtgtc 5040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 611 - 679
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||||||||| |||||| || ||||| |||||||||||| |||||||| ||| ||||||  ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 534 - 610
Target Start/End: Original strand, 21091706 - 21091782
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtca 610  Q
    |||||||||||||| |||||||   |||| |||| | ||||| ||||| |||||||||| |||||||||| ||||||    
T  21091706 acggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtcagtgtca 21091782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 18889630 - 18889519
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagaca-cgacacgtgtccgacaccgggacatgcctaatctgagaagtgtc 669  Q
    ||||||||||||||||||||||  | | ||||||||||| |||  ||||| |||| |||| | ||||||||||| |||||  ||||| |  || ||||||    
T  18889630 aaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacccggacacacctaacccaagtagtgtc 18889531  T
Q  670 tgtgcttcatag 681  Q
    | ||||||||||    
T  18889530 tctgcttcatag 18889519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 592
Target Start/End: Original strand, 24009259 - 24009337
Alignment:
Q  513 tacaacctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    ||||| |||||||||||  |||||||||| |||||| |||||||  ||||| ||||| ||||||||| ||| ||||||||    
T  24009259 tacaatctatgaagcacggatacggacac-gacacggcgacacagctaatttttttagaaaatcacaaaatgcagtgtaa 24009337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 634
Target Start/End: Original strand, 24067273 - 24067336
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtg 634  Q
    ||||| |||||||||| |||||  |||||||| ||| ||||||||||||| ||||| |||||||    
T  24067273 aaaatgacataattcaatgtaatcacaagtgttggtttcatgtcggtgtcggacacaacacgtg 24067336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 38442295 - 38442365
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||| | ||||| |||| |||| |||||||||||||||||| | ||| || |||||||||||||    
T  38442295 acactgacacgcgg-cacaactaatgatttaaaaaaatcacataattcaatataattataagtgtcggtgtc 38442365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 551 - 609
Target Start/End: Complemental strand, 18256039 - 18255981
Alignment:
Q  551 gacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||| ||||| |||| |||||||||||||||| | ||||| || |||||||||||||    
T  18256039 gacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtc 18255981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 530 - 592
Target Start/End: Original strand, 19573958 - 19574019
Alignment:
Q  530 aaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    |||||||||||| |||||||||||||  ||||| |||| | ||||| ||||||||||||||||    
T  19573958 aaatacggacac-gacacgccgacaccgataataatttaagaaaataacataattcagtgtaa 19574019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 534 - 592
Target Start/End: Original strand, 21616745 - 21616803
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 592  Q
    |||||||| |||||||||||||   |||| |||| | ||||||||||||||||||||||    
T  21616745 acggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaa 21616803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 22084871 - 22084756
Alignment:
Q  571 aaaatcacataattcagtgtaact--acaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacacc---gggacatgcctaatctgagaag 665  Q
    ||||||| |||||||||||||| |  | | ||| |||| || |||| ||||| ||||| ||||||||| ||||||   |||||| |||||||| ||  ||    
T  22084871 aaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgag 22084772  T
Q  666 tgtctgtgcttcatag 681  Q
    ||||||||||||||||    
T  22084771 tgtctgtgcttcatag 22084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 572 - 681
Target Start/End: Complemental strand, 29367382 - 29367283
Alignment:
Q  572 aaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctg 671  Q
    ||||||||||||| ||||||| ||||| ||||||| || |||||||          ||| ||||||||||||| ||||||||||||| ||| | ||| ||    
T  29367382 aaatcacataatttagtgtaattacaaatgtcggtatcgtgtcggt----------acatgtgtccgacaccgagacatgcctaatccgaggaatgtttg 29367293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 627 - 681
Target Start/End: Original strand, 37559042 - 37559096
Alignment:
Q  627 gacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||||||||||| ||| || ||||| ||| |||||| |||||||||||    
T  37559042 gacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 644
Target Start/End: Original strand, 4207865 - 4207949
Alignment:
Q  559 taattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccg 644  Q
    |||| |||| |||||| | ||||||| ||||||| || |  ||||||| || |||||||||| |||||||||||||| ||||||||    
T  4207865 taataatttgaaaaaagcgcataatttagtgtaattatat-tgtcggtatcgtgtcggtgtcggacacgacacgtgttcgacaccg 4207949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 607
Target Start/End: Original strand, 23718009 - 23718082
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtg 607  Q
    |||||||||||||| |||||||   |||| |||| | ||| |||||||||||||||||| || | |||||||||    
T  23718009 acggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 607
Target Start/End: Original strand, 24105681 - 24105754
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtg 607  Q
    |||||||||||||| |||||||   |||| |||| | ||| |||||||||||||||||| || | |||||||||    
T  24105681 acggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 603
Target Start/End: Original strand, 39323247 - 39323316
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtc 603  Q
    ||||||||||| ||| ||||||   |||| |||| | ||||| |||||||||||||||| ||||||||||    
T  39323247 acggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 73; Significance: 7e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 537 - 682
Target Start/End: Original strand, 71709 - 71856
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaa--aatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtg 634  Q
    ||||||||||||||||||||  |||| |||| ||||  ||||||| |||||||||||| ||| |||||| ||||| |||||||||| ||||| |||||||    
T  71709 gacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtg 71808  T
Q  635 tccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||||||||||||| | |||||| ||| |||||| ||||||||||||    
T  71809 tccgacaccgggacacgactaatccgaggagtgtcggtgcttcatagg 71856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 523 - 681
Target Start/End: Complemental strand, 8722 - 8564
Alignment:
Q  523 gaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcag 622  Q
    ||||||| |||||| ||||||||| |||||||||| |||| |||| |||| |||||||||||| || ||| ||||| |||||||||| ||||||| || |    
T  8722 gaagcacgaatacgaacactgacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcgg 8623  T
Q  623 acacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||| ||||||||||||| || ||| |||||||  ||| |||||| |||||||||||    
T  8622 acacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 571 - 681
Target Start/End: Complemental strand, 44564 - 44454
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    |||||||||||||||||||||| || | |||||||| || |||||||||  ||||| ||||||||||||||| ||||||||  |||||||||||||||||    
T  44564 aaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtct 44465  T
Q  671 gtgcttcatag 681  Q
    |||||||||||    
T  44464 gtgcttcatag 44454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 537 - 682
Target Start/End: Complemental strand, 3922 - 3777
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||| | ||||||||   |||| |||| |||||||||||||||||||||||| |||||||||| ||||| ||| |||||| |||||||||| ||||    
T  3922 gacactgatatgccgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtc 3823  T
Q  637 cgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    ||||| || |||| |||||||| ||| ||||||  |||||||||||    
T  3822 cgacatcgagacacgcctaatccgaggagtgtccttgcttcatagg 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 569 - 681
Target Start/End: Original strand, 2946 - 3058
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||| ||||||| ||||||| || ||||| ||||||| ||||||||||||||||| ||||||||| ||| |||||||| ||| |||||    
T  2946 aaaaaatcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgt 3045  T
Q  669 ctgtgcttcatag 681  Q
    | ||||| |||||    
T  3046 ccgtgctccatag 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 519 - 680
Target Start/End: Original strand, 92775 - 92940
Alignment:
Q  519 ctatgaagcacaaatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcat----gtc 614  Q
    |||||||||||  ||||||||||||||||||||||||   |||| |||| | ||||| |||||||||||||||| |||||||||| || |  |    ||     
T  92775 ctatgaagcacggatacggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtcagttttgtgttggtg 92874  T
Q  615 ggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||||| |||||||||| |||| |||||| ||||| |||||||| ||| |||||| ||||||||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 609
Target Start/End: Original strand, 123612 - 123686
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaa---tcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||| |||||  |||| |||| ||||||   |||||||||||||||||| ||||||||||||||||    
T  123612 acactgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 564 - 609
Target Start/End: Original strand, 83173 - 83218
Alignment:
Q  564 attttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||| ||||||| |||||||||||||||| ||||| ||||||||||    
T  83173 atttaaaaaaatgacataattcagtgtaattacaaatgtcggtgtc 83218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 571 - 674
Target Start/End: Original strand, 53200 - 53303
Alignment:
Q  571 aaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtct 670  Q
    |||||||||||||||||||||| || ||||||||||| | |||||||||| |||| ||||||||||||||||||||||| |  |||||  |||||||||     
T  53200 aaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtcc 53299  T
Q  671 gtgc 674  Q
    ||||    
T  53300 gtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 534 - 615
Target Start/End: Complemental strand, 178895 - 178813
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatca-cataattcagtgtaactacaagtgtcggtgtcatgtcg 615  Q
    |||||||||||||||||||||||| |||| |||| ||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  178895 acggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtcatgtcg 178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 532 - 603
Target Start/End: Complemental strand, 192327 - 192256
Alignment:
Q  532 atacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtc 603  Q
    ||||||||||||||||||||||||   |||| |||| | ||||| ||||||||| |||||| ||||||||||    
T  192327 atacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 679
Target Start/End: Original strand, 13383 - 13523
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||| |||| |||| | ||||||||||||||||||| || |||||| |||||     |||||||||| |||||||||||     
T  13383 acggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcgg-----tgtcggtgtcggacacgacacgc 13477  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||| |||||  |||||  |||||||  || |||||| |||||||||    
T  13478 gtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 569 - 682
Target Start/End: Original strand, 23529 - 23642
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||||||||||| || ||||||| ||||| | |||||||| ||||||| | |||||||| || |||||| || |||||  ||||||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgt 23628  T
Q  669 ctgtgcttcatagg 682  Q
     |||||||||||||    
T  23629 ttgtgcttcatagg 23642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 537 - 616
Target Start/End: Original strand, 23406 - 23485
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcgg 616  Q
    |||||||||||||||||||| ||||| | |  |||||||||||||||||||||||| || ||||||||||||| ||||||    
T  23406 gacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgg 23485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 21944 - 21804
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||| |||| |||| | ||||||||||||||||||| || |||||| |||||     |||||||||| |||||||||||     
T  21944 acggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcgg-----tgtcggtgtcggacacgacacgc 21850  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||| |||||  |||||  |||||||  || |||||| |||||||||    
T  21849 gtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 681
Target Start/End: Original strand, 8781 - 8917
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| ||||||||| || ||| ||||||| ||||||||||||||||            ||||||||||||    
T  8781 acggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcg-----------gacacgacacgt 8869  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    ||||||||||| |||| |||||||||||| ||| || |||||||||||    
T  8870 gtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 263448 - 263303
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||||| | | ||||   |||| |||| | |||| ||||||||||||||||| || ||||||| ||||| |||||||||||||||||||||||    
T  263448 acggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgt 263349  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    || ||| |||  |||| |||||||| ||| |||||| ||| |||||    
T  263348 gttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 534 - 618
Target Start/End: Original strand, 20155 - 20239
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtg 618  Q
    ||||||| |||||||||||||||  |||| |||| |||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  20155 acggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtg 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 534 - 638
Target Start/End: Original strand, 51794 - 51890
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||| |||||||||        |||||||||||||||||| ||||    
T  51794 acggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt--------tgtcggtgtcagacacgatacgt 51885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 679
Target Start/End: Complemental strand, 9819 - 9678
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    |||| |||| |||||| | | |||| |||| | |||||||| ||||||||||||| || | ||||||||||| ||| ||||||||||||||||| ||||     
T  9819 acacagacatgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtct 9720  T
Q  638 gacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    |||| ||||||| |  ||||| ||| |||||| |||||||||    
T  9719 gacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 680
Target Start/End: Complemental strand, 538 - 403
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgt 633  Q
    ||||||||||| ||||||||||   |||| |||| ||||||||||| |||||||||||| ||||||||||||           |||| |||||||| |||    
T  538 acggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcgg-----------tgtcggacacgacgcgt 450  T
Q  634 gtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    ||||||||||||||||  ||||||| ||| |||||| ||||||||||    
T  449 gtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 520 - 681
Target Start/End: Original strand, 14498 - 14646
Alignment:
Q  520 tatgaagcacaaatacggacactg-acacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtg 618  Q
    ||||||||||  |||||||||| | |||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||              ||||    
T  14498 tatgaagcacggatacggacaccggacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagt--------------ggtg 14583  T
Q  619 tcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    || ||||||||||||||||||||||| |||| ||||||||  || |||||  |||||||||||    
T  14584 tcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 534 - 609
Target Start/End: Original strand, 46665 - 46740
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||| |||||||||||||||  |||| |||| |||||||||||||||||||||||| ||||| ||||||||||    
T  46665 acggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtc 46740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 5046 - 4976
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatag 681  Q
    |||||||||| ||||||||||||||||||||  | ||||||||||||| ||| ||||||||||||||||||    
T  5046 tgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 569 - 681
Target Start/End: Complemental strand, 4924 - 4821
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgt 668  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||         ||||||||| |||||||||| |||||| |||||||| ||| |||||    
T  4924 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgt---------acacgacacatgtccgacacagggacacgcctaatccgaggagtgt 4834  T
Q  669 ctgtgcttcatag 681  Q
    | |||||||||||    
T  4833 ccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 536 - 680
Target Start/End: Complemental strand, 6070 - 5926
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    |||||| |||||||||| |||  ||||| ||||| ||||||||| ||| |||||||| || | ||||||||||| | ||||||||  |||||||||||||    
T  6070 ggacaccgacacgccgatacatctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgt 5971  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    | ||||| | |||| |||| |||  || |||||| |||| |||||    
T  5970 ctgacacagagacacgccttatccaaggagtgtccgtgcctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 537 - 644
Target Start/End: Original strand, 19562 - 19662
Alignment:
Q  537 gacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtc 636  Q
    |||||||||||||||| |||| |||| |||| |||| ||||||||||||||||||| |||||      |||| ||||||||||  |||||||||||||||    
T  19562 gacactgacacgccgatacaactaataatttgaaaa-atcacataattcagtgtaattacaa------gtgttatgtcggtgttggacacgacacgtgtc 19654  T
Q  637 cgacaccg 644  Q
    ||||||||    
T  19655 cgacaccg 19662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 535 - 609
Target Start/End: Complemental strand, 17824 - 17750
Alignment:
Q  535 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||| | |||||| ||||||| |||| |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  17824 cggacaataacacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 607
Target Start/End: Original strand, 130465 - 130538
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtg 607  Q
    ||||||| ||||| |||||||||  ||||  ||| |||||||||||||||||||||||| ||||||||||||||    
T  130465 acggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 45607 - 45531
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatc-acataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||| |||||||| ||||||| | ||||||   |||||||||||||||| ||||||||||||||||    
T  45607 acggacactgacacgtcgacacaattaattatctaaaaaaaaatacataattcagtgtaattacaagtgtcggtgtc 45531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 611 - 658
Target Start/End: Original strand, 70327 - 70374
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatc 658  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  70327 tgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatc 70374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 225344 - 225199
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacac-gacacg 632  Q
    ||||||||||||||||||||||| ||||| |||| | ||||| ||||||| || ||||| || ||||||||   |  |||| ||||| ||||| ||| ||    
T  225344 acggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgtc-gtgtcggacactgacgcg 225246  T
Q  633 tgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcat 679  Q
    ||| ||||||| ||||| |||||||  ||| |||||| |||||||||    
T  225245 tgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 544 - 682
Target Start/End: Original strand, 24018 - 24156
Alignment:
Q  544 acacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt--ccgaca 641  Q
    |||| ||||||||  |||| ||||| ||||||| ||||||| ||||||| |||| || || ||||| |||||||||| ||||| ||||||||  ||||||    
T  24018 acacaccgacacagctaataattttcaaaaatctcataatttagtgtaattaca-gtttcagtgtcgtgtcggtgtcggacacaacacgtgtgtccgaca 24116  T
Q  642 ccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    | || ||| |||||||| ||  |||||| ||||||||||||    
T  24117 ctgg-acacgcctaatccgatgagtgtccgtgcttcatagg 24156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 536 - 680
Target Start/End: Original strand, 8651 - 8795
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgt 635  Q
    ||||||||||||| ||||||   |||| ||||   ||||||||||| |||||| ||| || ||||||||||||| ||||  ||||||||  || ||||||    
T  8651 ggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcgtgtctatgtcagacgtgatacgtgt 8750  T
Q  636 ccgacaccgggacatgcctaatctgagaagtgtctgtgcttcata 680  Q
    |||| ||   |||| |||| ||| ||||||||||  |||||||||    
T  8751 ccgatactaagacacgccttatccgagaagtgtccatgcttcata 8795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 543 - 609
Target Start/End: Original strand, 8002 - 8067
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    ||||||||||||||| |||| |||| ||||||||| ||||| |||||||| || |||||||||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtc 8067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 85045 - 84925
Alignment:
Q  538 acactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtcc 637  Q
    |||| ||||||||||||| | || | |||| | ||||||| ||||||  |||||| || |  |||||||||||||||| ||||  |||| ||||||||||    
T  85045 acacggacacgccgacaccactactaatttaagaaaatcatataattatgtgtaattatatatgtcggtgtcatgtcgatgtcgaacacaacacgtgtcc 84946  T
Q  638 gacaccgggacatgcctaatc 658  Q
    |||| | ||||| ||||||||    
T  84945 gacaacaggacacgcctaatc 84925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 609
Target Start/End: Original strand, 23788 - 23828
Alignment:
Q  569 aaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  23788 aaaaaatcacataattcagtgtaattacaagtgtcggtgtc 23828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 609
Target Start/End: Complemental strand, 7111 - 7033
Alignment:
Q  531 aatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||||||||||| ||| |||||||  |||| |||| ||||||| |||||||| ||| ||| ||||||||| ||||||    
T  7111 aatacggacactgatacgtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtc 7033  T

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Target: scaffold0154 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 687
Target Start/End: Original strand, 13456 - 13549
Alignment:
Q  594 tacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcataggataca 687  Q
    |||| ||||||| ||| |||||||||| |||||||||||| | ||||| ||||| |  ||||||| ||| |||||| || |||||||| |||||    
T  13456 tacatgtgtcggggtcgtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcatagcataca 13549  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 602
Target Start/End: Complemental strand, 7403 - 7319
Alignment:
Q  519 ctatgaagcacaaatacggacactg-acacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgt 602  Q
    |||||||||||  |||| ||||| | |||||||||||||| |||| ||||  ||||||||||||||| ||||||| || ||||||    
T  7403 ctatgaagcacggatacagacaccggacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 682
Target Start/End: Original strand, 8662 - 8721
Alignment:
Q  623 acacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcatagg 682  Q
    |||||||||||||||||||| |||| | ||||||||  || |||||| ||||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatagg 8721  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 598
Target Start/End: Complemental strand, 33430 - 33375
Alignment:
Q  543 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaa 598  Q
    ||||||||||||||  |||| |||| ||||||| |||||||||||||||| |||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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Target: scaffold1528 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 541 - 619
Target Start/End: Original strand, 1025 - 1103
Alignment:
Q  541 ctgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgt 619  Q
    ||||||| |||||||   |||| |||| ||||||| ||||||||||||||||||| | ||||| ||||  |||||||||    
T  1025 ctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgt 1103  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 611 - 685
Target Start/End: Original strand, 3357 - 3431
Alignment:
Q  611 tgtcggtgtcagacacgacacgtgtccgacaccgggacatgcctaatctgagaagtgtctgtgcttcataggata 685  Q
    |||| ||||| |||| ||||||||   ||||| |||||| |||||||| ||| |||||| |||||||||||||||    
T  3357 tgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcataggata 3431  T

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Target: scaffold0168 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 627
Target Start/End: Original strand, 21026 - 21119
Alignment:
Q  534 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtcatgtcggtgtcagacacg 627  Q
    ||||||||||||| || |||||   |||| |||| | |||||||||||| || || ||| || | |||||||| || |||||||||||||||||    
T  21026 acggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcggtatcgtgtcggtgtcagacacg 21119  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 609
Target Start/End: Original strand, 9883 - 9956
Alignment:
Q  536 ggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 609  Q
    |||||| ||||||||||||||  ||||| ||||| ||||||| | ||| |||||||| || | |||||||||||    
T  9883 ggacaccgacacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtc 9956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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