View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_high_39 (Length: 417)
Name: NF0583_high_39
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_high_39 |
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Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 30 - 388
Target Start/End: Original strand, 39304060 - 39304414
Alignment:
| Q |
30 |
gttaattaagtttggtaatttgtcatcaaagggtatttctatttgtattgacaataatagtgttatctaagttggaattggatcgggtcgtggcagttac |
129 |
Q |
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| T |
39304060 |
gttaattaagtttggtaatttgtcatcaaagggtatttctatttgtattgacaataatagtgttatctaagttggaattggatcgggtcgtggcagttac |
39304159 |
T |
|
| Q |
130 |
atgaagtactcaacatctagaacgagtccgggggacttgcctannnnnnnnnnnnnaacttttacttctcctaactaacccttcttacttgcctattttt |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39304160 |
atgaagtactcaacatctagaacgagtccgggggacttgcctatttttctttttttaacttttacttctcctaactaacccttcttacttgcctattttt |
39304259 |
T |
|
| Q |
230 |
atgcctcactttcagtttatatatctatacaataatgtaaattttaaatgtaatattgtaaggtcacgtaacatccttcctataagctcattaatttagt |
329 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
39304260 |
atgcctcactttcagtttatctatctatacaataatgtaaattttaaatgtaatattgtaaggtcacgtaaca----tcctataagctcattaatttagt |
39304355 |
T |
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| Q |
330 |
tccaatggatgatgagagtcatagtaatttgccaaatggattcaacacagaaaaccctg |
388 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39304356 |
tccaatggatgatgagagtcatagtaatttgccaaatggattcaacacagaaaaccctg |
39304414 |
T |
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