View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_112 (Length: 297)
Name: NF0583_low_112
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_112 |
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Alignment Details
Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 68 - 237
Target Start/End: Original strand, 36227031 - 36227200
Alignment:
| Q |
68 |
tggcttcaaatattgaattacttcggaggggtttatcggcgaattccgggtattcaatctcttttttcgggctttgccgggctcttccctttcctttgat |
167 |
Q |
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| T |
36227031 |
tggcttcaaatattgaattacttcagaggggtttatcggcaaattccgagtattcaatctcttttttcgggctttgtcgggctcttccctttcctttgat |
36227130 |
T |
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| Q |
168 |
aaatttcctcctacaagctcttgaaagtctttgactaagccttcttcccgctctactggaaactttccaa |
237 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36227131 |
aaatttccccctacaagctcttgaaagtctttgactaagccttcttcccgctctactggaaactttccaa |
36227200 |
T |
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