View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0583_low_117 (Length: 290)
Name: NF0583_low_117
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0583_low_117 |
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Alignment Details
Target: chr7 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 90 - 250
Target Start/End: Original strand, 30748298 - 30748458
Alignment:
| Q |
90 |
tggcactgagagcagctatactccgccatgttcgtattccaatccaatccactccaaaattacaaccatggaatggttccattcgatccatgtcttcaca |
189 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30748298 |
tggcactgagagcagctatactccgccatgttcgtattccaatccaatccactccaaaattacaaccatggaatggttccattcgatccatgtcttcaca |
30748397 |
T |
|
| Q |
190 |
cgacgatcatatcaccaaagaagaagtcgtcgagcgagtcctctctgtcatcaaagatttc |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30748398 |
cgacgatcatatcaccaaagaagaagtcgtcgagcgagtcctctctgtcatcaaagatttc |
30748458 |
T |
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