View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0583_low_119 (Length: 289)

Name: NF0583_low_119
Description: NF0583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0583_low_119
NF0583_low_119
[»] scaffold0796 (2 HSPs)
scaffold0796 (49-231)||(1656-1838)
scaffold0796 (49-231)||(5679-5861)
[»] chr3 (17 HSPs)
chr3 (48-231)||(24933753-24933934)
chr3 (120-231)||(41455092-41455203)
chr3 (126-231)||(9534276-9534382)
chr3 (128-231)||(20247791-20247895)
chr3 (126-231)||(14762758-14762864)
chr3 (128-231)||(38310802-38310906)
chr3 (128-231)||(24192904-24193009)
chr3 (125-198)||(23370505-23370579)
chr3 (125-231)||(10389443-10389550)
chr3 (125-231)||(10414532-10414639)
chr3 (125-231)||(10421202-10421309)
chr3 (63-177)||(13302180-13302292)
chr3 (63-162)||(13312836-13312933)
chr3 (63-177)||(13323727-13323839)
chr3 (120-189)||(16801462-16801531)
chr3 (126-207)||(17240513-17240595)
chr3 (126-177)||(18929249-18929300)
[»] chr6 (18 HSPs)
chr6 (48-230)||(25469630-25469808)
chr6 (120-231)||(12168312-12168423)
chr6 (120-231)||(19287221-19287332)
chr6 (120-231)||(19878405-19878516)
chr6 (120-231)||(19785864-19785975)
chr6 (120-231)||(19884181-19884292)
chr6 (125-231)||(34639986-34640093)
chr6 (125-231)||(34646660-34646767)
chr6 (120-232)||(930090-930203)
chr6 (49-141)||(14581076-14581167)
chr6 (126-231)||(23057887-23057993)
chr6 (120-206)||(18800411-18800498)
chr6 (120-231)||(29614141-29614254)
chr6 (126-231)||(23839146-23839253)
chr6 (126-198)||(4477839-4477912)
chr6 (125-231)||(10986180-10986288)
chr6 (120-177)||(24512838-24512895)
chr6 (126-177)||(9187499-9187550)
[»] chr7 (19 HSPs)
chr7 (120-231)||(12590638-12590749)
chr7 (120-231)||(13007381-13007492)
chr7 (120-231)||(12709838-12709949)
chr7 (120-231)||(13122909-13123020)
chr7 (120-231)||(13743658-13743769)
chr7 (122-231)||(14422932-14423043)
chr7 (121-231)||(18873309-18873420)
chr7 (126-231)||(15168124-15168230)
chr7 (126-207)||(16009549-16009631)
chr7 (128-198)||(16677277-16677348)
chr7 (128-198)||(17651513-17651584)
chr7 (130-198)||(10895795-10895864)
chr7 (126-177)||(11382871-11382922)
chr7 (126-177)||(11389348-11389399)
chr7 (120-177)||(21230954-21231011)
chr7 (125-177)||(20311051-20311103)
chr7 (120-161)||(831628-831669)
chr7 (120-161)||(1196808-1196849)
chr7 (120-161)||(34958578-34958619)
[»] chr8 (9 HSPs)
chr8 (120-231)||(17054540-17054651)
chr8 (120-231)||(23866564-23866675)
chr8 (125-231)||(44477571-44477678)
chr8 (125-231)||(44492729-44492836)
chr8 (128-198)||(8727735-8727806)
chr8 (126-207)||(23482053-23482135)
chr8 (126-224)||(18614227-18614327)
chr8 (112-156)||(25112001-25112045)
chr8 (120-156)||(14056558-14056594)
[»] chr5 (8 HSPs)
chr5 (121-231)||(23528580-23528690)
chr5 (120-231)||(38144531-38144643)
chr5 (126-231)||(28370055-28370161)
chr5 (121-231)||(22751090-22751201)
chr5 (126-231)||(19512334-19512441)
chr5 (126-207)||(18407944-18408026)
chr5 (126-207)||(23111200-23111282)
chr5 (125-177)||(22438747-22438799)
[»] scaffold0129 (1 HSPs)
scaffold0129 (120-231)||(45269-45381)
[»] chr4 (5 HSPs)
chr4 (125-231)||(53483653-53483760)
chr4 (120-207)||(8045827-8045914)
chr4 (120-205)||(11848088-11848174)
chr4 (125-177)||(15408143-15408195)
chr4 (120-161)||(15747551-15747592)
[»] chr1 (6 HSPs)
chr1 (120-231)||(41111984-41112095)
chr1 (49-138)||(20044876-20044964)
chr1 (126-231)||(20437024-20437131)
chr1 (126-207)||(32651545-32651627)
chr1 (126-192)||(18712787-18712854)
chr1 (126-177)||(19663517-19663568)
[»] chr2 (8 HSPs)
chr2 (125-231)||(5706023-5706130)
chr2 (120-207)||(26583800-26583887)
chr2 (126-231)||(6483666-6483772)
chr2 (126-231)||(6487133-6487239)
chr2 (126-231)||(19661454-19661560)
chr2 (126-207)||(23265115-23265197)
chr2 (126-207)||(23280183-23280265)
chr2 (126-177)||(21908363-21908414)
[»] scaffold1773 (1 HSPs)
scaffold1773 (120-229)||(1129-1238)
[»] scaffold0006 (1 HSPs)
scaffold0006 (120-229)||(50130-50239)
[»] scaffold0384 (1 HSPs)
scaffold0384 (49-177)||(15989-16116)
[»] scaffold0026 (2 HSPs)
scaffold0026 (120-231)||(11845-11957)
scaffold0026 (125-231)||(111634-111741)
[»] scaffold0058 (1 HSPs)
scaffold0058 (120-231)||(240-351)
[»] scaffold0117 (2 HSPs)
scaffold0117 (120-231)||(1892-2005)
scaffold0117 (120-231)||(8569-8682)
[»] scaffold0029 (1 HSPs)
scaffold0029 (120-231)||(111830-111943)
[»] scaffold0553 (2 HSPs)
scaffold0553 (49-138)||(11008-11096)
scaffold0553 (125-198)||(10195-10269)
[»] scaffold0154 (1 HSPs)
scaffold0154 (120-231)||(30805-30918)
[»] scaffold0924 (1 HSPs)
scaffold0924 (120-229)||(745-856)
[»] scaffold0247 (1 HSPs)
scaffold0247 (120-206)||(11315-11402)
[»] scaffold0456 (2 HSPs)
scaffold0456 (121-211)||(900-991)
scaffold0456 (121-211)||(8045-8136)
[»] scaffold0025 (1 HSPs)
scaffold0025 (128-231)||(14398-14503)
[»] scaffold0544 (1 HSPs)
scaffold0544 (125-198)||(1525-1599)
[»] scaffold0090 (1 HSPs)
scaffold0090 (120-189)||(18160-18230)
[»] scaffold0020 (1 HSPs)
scaffold0020 (126-207)||(101928-102010)
[»] scaffold0222 (1 HSPs)
scaffold0222 (126-207)||(16793-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (126-207)||(116869-116951)
[»] scaffold0461 (1 HSPs)
scaffold0461 (126-207)||(8-90)
[»] scaffold0146 (1 HSPs)
scaffold0146 (126-207)||(13605-13687)
[»] scaffold0107 (1 HSPs)
scaffold0107 (120-177)||(40526-40583)
[»] scaffold0310 (1 HSPs)
scaffold0310 (125-177)||(17647-17699)
[»] scaffold0019 (1 HSPs)
scaffold0019 (125-177)||(135477-135529)
[»] scaffold0348 (1 HSPs)
scaffold0348 (49-177)||(9339-9467)
[»] scaffold0235 (1 HSPs)
scaffold0235 (127-177)||(22594-22644)
[»] scaffold0815 (1 HSPs)
scaffold0815 (111-180)||(1450-1519)
[»] scaffold0124 (1 HSPs)
scaffold0124 (126-177)||(34276-34327)


Alignment Details
Target: scaffold0796 (Bit Score: 175; Significance: 3e-94; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 49 - 231
Target Start/End: Original strand, 1656 - 1838
Alignment:
Q  49 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagaccatctc 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1656 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctc 1755  T
Q  149 tcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatgatg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1756 tcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatgatg 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 49 - 231
Target Start/End: Original strand, 5679 - 5861
Alignment:
Q  49 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagaccatctc 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5679 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctc 5778  T
Q  149 tcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatgatg 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5779 tcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaagttagggtttgatgatg 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 4e-81; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 48 - 231
Target Start/End: Original strand, 24933753 - 24933934
Alignment:
Q  48 cagagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagaccatct 147  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| ||||    
T  24933753 cagagaaagcaagagaaaccaagaacaagggg--aaaacttaggagctgatttgcggtgttaattcttcctacaattctaaggtaagggtgagactatct 24933850  T
Q  148 ctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatgatg 231  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24933851 ctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatgatg 24933934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 41455092 - 41455203
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  41455092 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataggatgaaaattag 41455191  T
Q  220 ggtttgatgatg 231  Q
    || |||||||||    
T  41455192 ggattgatgatg 41455203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 9534382 - 9534276
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 224  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  |||   |||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  225 gatgatg 231  Q
    |||||||    
T  9534282 gatgatg 9534276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 20247791 - 20247895
Alignment:
Q  128 aggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttga 226  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||   |||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  227 tgatg 231  Q
    |||||    
T  20247891 tgatg 20247895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 14762758 - 14762864
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 224  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||   |||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  225 gatgatg 231  Q
    |||||||    
T  14762858 gatgatg 14762864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 38310802 - 38310906
Alignment:
Q  128 aggtaagggtgagaccatctctcaataatcataatctataattcctgaa-attgacctaattgaatagttttggaaaataatatgaaaattagggtttga 226  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||  |||   |||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  227 tgatg 231  Q
    |||||    
T  38310902 tgatg 38310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 24193009 - 24192904
Alignment:
Q  128 aggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataatatgaaaattagggtttg 225  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| ||||  |||   ||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  226 atgatg 231  Q
    ||||||    
T  24192909 atgatg 24192904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 23370505 - 23370579
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 198  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 23370579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 10389443 - 10389550
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaat-tgacctaattgaatagttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||| ||  |||| ||||| || ||||| ||||||| ||||||  | | ||||||||||||||||  | |||||||||||||||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  10389543 tgatgatg 10389550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 10414532 - 10414639
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaat-tgacctaattgaatagttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||| ||  |||| ||||| || ||||| ||||||| ||||||  | | ||||||||||||||||  | |||||||||||||||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  10414632 tgatgatg 10414639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 10421202 - 10421309
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaat-tgacctaattgaatagttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||| ||  |||| ||||| || ||||| ||||||| ||||||  | | ||||||||||||||||  | |||||||||||||||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  10421302 tgatgatg 10421309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 13302180 - 13302292
Alignment:
Q  63 aaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagaccatctctcaataatcataat 162  Q
    |||||||||||||||| ||  ||| ||||| |||||||||||||||  || || ||||||  |||||||||||||||||  |||| ||||||||||||||    
T  13302180 aaaccaagaacaagggagatgaacctaggaactgatttgctgtgtt--ttttttctacaattctaaggtaagggtgagattatctttcaataatcataat 13302277  T
Q  163 ctataattcctgaaa 177  Q
     | ||||| ||||||    
T  13302278 atgtaatttctgaaa 13302292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 13312836 - 13312933
Alignment:
Q  63 aaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagaccatctctcaataatcataat 162  Q
    |||||||||||||||| ||  ||| ||||| |||||||||||||||  || || ||||||  |||||||||||||||||  |||| ||||||||||||||    
T  13312836 aaaccaagaacaagggagatgaacctaggaactgatttgctgtgtt--ttttttctacaattctaaggtaagggtgagattatctttcaataatcataat 13312933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 177
Target Start/End: Original strand, 13323727 - 13323839
Alignment:
Q  63 aaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagaccatctctcaataatcataat 162  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||  ||  || || ||||||  |||||||||||||||||  |||| ||||||||||||||    
T  13323727 aaaccaagaacaagggagaagaacctaggaactgatttgctgattt--ttttttctacaattctaaggtaagggtgagattatctttcaataatcataat 13323824  T
Q  163 ctataattcctgaaa 177  Q
     | ||||| ||||||    
T  13323825 atgtaatttctgaaa 13323839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 16801462 - 16801531
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattg 189  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||| ||| |||||||||| ||||    
T  16801462 caaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattg 16801531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 17240513 - 17240595
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataa 17240595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 18929300 - 18929249
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    ||||||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaa 18929249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 48 - 230
Target Start/End: Original strand, 25469630 - 25469808
Alignment:
Q  48 cagagaaagcaagagaaa--ccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagaccat 145  Q
    ||||||||||||||||||  ||||||||||||||   |||||||||||| |||| ||||||||||| |||| |||||  |||||||||||||||||| ||    
T  25469630 cagagaaagcaagagaaaaaccaagaacaagggg---aaacttaggagccgatt-gctgtgttaatccttcttacaat-ctaaggtaagggtgagactat 25469724  T
Q  146 ctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgatgat 230  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25469725 ctctcaataatcataatctataattc-tgaaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgatgat 25469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 12168423 - 12168312
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  12168423 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttag 12168324  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  12168323 ggtttgatgatg 12168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 19287332 - 19287221
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  19287332 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttag 19287233  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  19287232 ggtttgatgatg 19287221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 19878516 - 19878405
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  19878516 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttag 19878417  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  19878416 ggtttgatgatg 19878405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 19785864 - 19785975
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  19785864 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctagttgaatagttttggaaaataaaatgaaagttag 19785963  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  19785964 ggtttgatgatg 19785975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 19884292 - 19884181
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  19884292 caaaactaaggttagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttag 19884193  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  19884192 ggtttgatgatg 19884181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 34639986 - 34640093
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  34640086 tgatgatg 34640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 34646660 - 34646767
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  34646760 tgatgatg 34646767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 930090 - 930203
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaatta 218  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||| ||||||||| |||||||  |||   |||    
T  930090 caaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggtta 930189  T
Q  219 gggtttgatgatgt 232  Q
    ||||||||||||||    
T  930190 gggtttgatgatgt 930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 14581076 - 14581167
Alignment:
Q  49 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgaga 141  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||  |||||||||||||||||    
T  14581076 agagaaagcaagagaaaccaataacaagggggaaaa-cttaggagctgttttgctgtgttaattcttcctgcaattctaaggtaagggtgaga 14581167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 23057993 - 23057887
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 224  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   |||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  225 gatgatg 231  Q
    |||||||    
T  23057893 gatgatg 23057887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 18800498 - 18800411
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaata 206  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||    
T  18800498 caaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 18800411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 29614141 - 29614254
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagttttggaaaa-taatatgaaaatt 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||| ||| |||||||||| |||  |||   ||    
T  29614141 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggtt 29614240  T
Q  218 agggtttgatgatg 231  Q
    ||||||||||||||    
T  29614241 agggtttgatgatg 29614254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 23839253 - 23839146
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagt-tttggaaaataatatgaaaattagggtt 223  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||||| ||||  |||   ||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  23839153 tgatgatg 23839146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 4477912 - 4477839
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 198  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 4477839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 10986180 - 10986288
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcct-gaaattgacctaattgaatag-ttttggaaaataatatgaaaattagggt 222  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| ||  ||||||||||||||| |||| |||||||| ||||  |||   |||||||    
T  10986180 ctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggt 10986279  T
Q  223 ttgatgatg 231  Q
    |||||||||    
T  10986280 ttgatgatg 10986288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 24512838 - 24512895
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||| ||||||| |||||||||| ||||||||||||||||| | ||||||| ||||||    
T  24512838 caaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaa 24512895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 9187550 - 9187499
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||| ||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaa 9187499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 12590638 - 12590749
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12590638 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataatatgaaagttag 12590737  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  12590738 ggtttgatgatg 12590749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 13007492 - 13007381
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  13007492 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttag 13007393  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  13007392 ggtttgatgatg 13007381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 12709838 - 12709949
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||   ||||    
T  12709838 caaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttag 12709937  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  12709938 ggtttgatgatg 12709949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 13122909 - 13123020
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||   ||||    
T  13122909 caaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttag 13123008  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  13123009 ggtttgatgatg 13123020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 13743769 - 13743658
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||   ||||    
T  13743769 caaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttag 13743670  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  13743669 ggtttgatgatg 13743658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 14423043 - 14422932
Alignment:
Q  122 aaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| ||||  |||   ||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  14422943 ggtttgatgatg 14422932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 18873420 - 18873309
Alignment:
Q  121 aaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||   ||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  18873320 ggtttgatgatg 18873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 15168230 - 15168124
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 224  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||   |||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  225 gatgatg 231  Q
    |||||||    
T  15168130 gatgatg 15168124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 16009631 - 16009549
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||| ||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataa 16009549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 16677348 - 16677277
Alignment:
Q  128 aggtaagggtgagaccatctctcaataatcataatctataattcct-gaaattgacctaattgaatagtttt 198  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||| ||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 16677277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 17651584 - 17651513
Alignment:
Q  128 aggtaagggtgagaccatctctcaataatcataatctataattcct-gaaattgacctaattgaatagtttt 198  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||| ||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttt 17651513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 10895795 - 10895864
Alignment:
Q  130 gtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 198  Q
    ||||||||||||| |||||||||||||||||||||||||||  || ||||||||||||||| ||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttt 10895864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 11382871 - 11382922
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaa 11382922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 11389348 - 11389399
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaa 11389399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 21230954 - 21231011
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  21230954 caaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 21231011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 20311051 - 20311103
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||| ||||||    
T  20311051 ctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaa 20311103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataa 161  Q
    ||||||||||||||||||||||| | ||||||||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataa 161  Q
    ||||||||||||||||||||||| | ||||||||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataa 161  Q
    ||||||||||||||||||||||| | ||||||||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 17054651 - 17054540
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  17054651 caaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataagatgaaagttag 17054552  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  17054551 ggtttgatgatg 17054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 23866675 - 23866564
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  |||   ||||    
T  23866675 caaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttag 23866576  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  23866575 ggtttgatgatg 23866564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 44477678 - 44477571
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  |||   ||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  44477578 tgatgatg 44477571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 44492836 - 44492729
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  |||   ||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  44492736 tgatgatg 44492729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 8727735 - 8727806
Alignment:
Q  128 aggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 198  Q
    ||||||||||||||  ||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 8727806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 23482053 - 23482135
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 23482135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 18614327 - 18614227
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataata-tgaaaattagggtt 223  Q
    ||||||||||||||||| |||||||||||||||| || ||||||| ||| ||||||| | |||||||| ||| | ||| |||| | ||| ||||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  224 t 224  Q
    |    
T  18614227 t 18614227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 25112045 - 25112001
Alignment:
Q  112 tcttcctacaaaactaaggtaagggtgagaccatctctcaataat 156  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||    
T  25112045 tctttctacaaatctaaggtaagggtgagactatctctcaataat 25112001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 14056558 - 14056594
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataat 156  Q
    |||| |||||||||||||||||| |||||||||||||    
T  14056558 caaatctaaggtaagggtgagactatctctcaataat 14056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 23528690 - 23528580
Alignment:
Q  121 aaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattagg 220  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttggaaaataagatgaaagttagg 23528591  T
Q  221 gtttgatgatg 231  Q
    |||||||||||    
T  23528590 gtttgatgatg 23528580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 38144531 - 38144643
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaatta 218  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||  |||   |||    
T  38144531 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggtta 38144630  T
Q  219 gggtttgatgatg 231  Q
    |||||||||||||    
T  38144631 gggtttgatgatg 38144643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 28370055 - 28370161
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 224  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  |||   |||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  225 gatgatg 231  Q
    |||||||    
T  28370155 gatgatg 28370161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 231
Target Start/End: Complemental strand, 22751201 - 22751090
Alignment:
Q  121 aaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||   ||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  22751101 ggtttgatgatg 22751090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 19512441 - 19512334
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataatatgaaaattagggtt 223  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| ||||  |||   ||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  19512341 tgatgatg 19512334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 18407944 - 18408026
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttcttgaaaataa 18408026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 23111200 - 23111282
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 23111282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 22438747 - 22438799
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  22438747 ctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaa 22438799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 45269 - 45381
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatag-ttttggaaaataatatgaaaatta 218  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  45269 caaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaatta 45368  T
Q  219 gggtttgatgatg 231  Q
    |||||||||||||    
T  45369 gggtttgatgatg 45381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 53483760 - 53483653
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatag-ttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaattagggtt 53483661  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  53483660 tgatgatg 53483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 120 - 207
Target Start/End: Original strand, 8045827 - 8045914
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  8045827 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaattgacctaattgcatagttttggaaaataa 8045914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 11848174 - 11848088
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaat 205  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||    
T  11848174 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaat 11848088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 15408195 - 15408143
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  15408195 ctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 15408143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataa 161  Q
    ||||||||||||||||||||||| | ||||||||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 41112095 - 41111984
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  41112095 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgaatagttttgaaaaataagatgaaagttag 41111996  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  41111995 ggtttgatgatg 41111984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 20044876 - 20044964
Alignment:
Q  49 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtg 138  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  20044876 agagaaagcaagagaaaacaagaacaagggggaaaa-cttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtg 20044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 20437024 - 20437131
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataatatgaaaattagggtt 223  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| ||||  |||   ||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  20437124 tgatgatg 20437131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 32651627 - 32651545
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||| ||| ||||||| |||||||| | ||| | ||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgagttgttcttgaaaataa 32651545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 18712854 - 18712787
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaat 192  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||| ||| ||||||| ||||||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaat 18712787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 19663517 - 19663568
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    ||||||||||||||||| ||||||| ||||||||| | ||||||| ||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaa 19663568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 5706023 - 5706130
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatag-ttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaattgacctaattgaatagtttttgaaaaataatatgaaaattagggtt 5706122  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  5706123 tgatgatg 5706130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 26583887 - 26583800
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  26583887 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaattgacctaattgcatagttttggaaaataa 26583800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 6483772 - 6483666
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 224  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  |||   |||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  225 gatgatg 231  Q
    |||||||    
T  6483672 gatgatg 6483666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 6487239 - 6487133
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 224  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  |||   |||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  225 gatgatg 231  Q
    |||||||    
T  6487139 gatgatg 6487133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 19661454 - 19661560
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggttt 224  Q
    |||||||||||||||||  |||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||   |||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  225 gatgatg 231  Q
    |||||||    
T  19661554 gatgatg 19661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 23265197 - 23265115
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 23265115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 23280265 - 23280183
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 23280183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 21908414 - 21908363
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    ||||||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaa 21908363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 1238 - 1129
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||   ||||    
T  1238 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttag 1139  T
Q  220 ggtttgatga 229  Q
    ||||||||||    
T  1138 ggtttgatga 1129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 120 - 229
Target Start/End: Complemental strand, 50239 - 50130
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||   ||||    
T  50239 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaattgacctaattgcatagttttggaaaataaattgagggttag 50140  T
Q  220 ggtttgatga 229  Q
    ||||||||||    
T  50139 ggtttgatga 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 15989 - 16116
Alignment:
Q  49 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagaccatctc 148  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||| ||  ||||     
T  15989 agagaaagcaagagaaaccaagaacaagggggaaaa-cttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatctt 16087  T
Q  149 tcaataatcataatctataattcctgaaa 177  Q
    |||||| | ||||| ||| ||| ||||||    
T  16088 tcaatagttataatatatgatttctgaaa 16116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 11845 - 11957
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaatta 218  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  ||| | |||    
T  11845 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagtta 11944  T
Q  219 gggtttgatgatg 231  Q
    |||||||||||||    
T  11945 gggtttgatgatg 11957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 111741 - 111634
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 223  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||  |||   ||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  224 tgatgatg 231  Q
    ||||||||    
T  111641 tgatgatg 111634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 351 - 240
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattgacctaattgaatagttttggaaaataatatgaaaattag 219  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||  |||   ||||    
T  351 caaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaattgacctaattgcatagttttggaaaataaattgagggttag 252  T
Q  220 ggtttgatgatg 231  Q
    ||||||||||||    
T  251 ggtttgatgatg 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 1892 - 2005
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg--aaattgacctaattgaatagttttggaaaataatatgaaaatt 217  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||| |||   ||    
T  1892 caaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtt 1991  T
Q  218 agggtttgatgatg 231  Q
    ||||||||||||||    
T  1992 agggtttgatgatg 2005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 8569 - 8682
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg--aaattgacctaattgaatagttttggaaaataatatgaaaatt 217  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||| |||   ||    
T  8569 caaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtt 8668  T
Q  218 agggtttgatgatg 231  Q
    ||||||||||||||    
T  8669 agggtttgatgatg 8682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 111943 - 111830
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg--aaattgacctaattgaatagttttggaaaataatatgaaaatt 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||| |||||||||||| ||||  |||   ||    
T  111943 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggtt 111844  T
Q  218 agggtttgatgatg 231  Q
    ||||||||||||||    
T  111843 agggtttgatgatg 111830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 11008 - 11096
Alignment:
Q  49 agagaaagcaagagaaaccaagaacaagggggaaaaacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtg 138  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  11008 agagaaagcaagagaaaacaagaacaagggggaaaa-cttaggagctgatttgctgtgttaattcttcctaaaattctaaggtaagggtg 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 10195 - 10269
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 198  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 10269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 30918 - 30805
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataata-tgaaaatt 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||  ||| | |||  |||    
T  30918 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggatt 30819  T
Q  218 agggtttgatgatg 231  Q
    ||||||||||||||    
T  30818 agggtttgatgatg 30805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 745 - 856
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataatatgaaaatt 217  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||||||||  |||   ||    
T  745 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggtt 844  T
Q  218 agggtttgatga 229  Q
    ||||||||||||    
T  845 agggtttgatga 856  T

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Target: scaffold0247 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 120 - 206
Target Start/End: Complemental strand, 11402 - 11315
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaata 206  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||    
T  11402 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 11315  T

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Target: scaffold0456 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 991 - 900
Alignment:
Q  121 aaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatg 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||||| ||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataatatg 900  T

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Target: scaffold0456; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 8136 - 8045
Alignment:
Q  121 aaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatg 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||| ||||| |||||| ||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataatatg 8045  T

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Target: scaffold0025 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 14398 - 14503
Alignment:
Q  128 aggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatag-ttttggaaaataatatgaaaattagggtttg 225  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||| ||||  |||   ||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  226 atgatg 231  Q
    ||||||    
T  14498 atgatg 14503  T

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Target: scaffold0544 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 1525 - 1599
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 198  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttt 1599  T

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Target: scaffold0090 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 18230 - 18160
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattg 189  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||  || |||||||||||||||    
T  18230 caaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattg 18160  T

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Target: scaffold0020 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 101928 - 102010
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||||||| ||||||| |||||||||| ||| | ||||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaattgttcttgaaaataa 102010  T

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Target: scaffold0222 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 16875 - 16793
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 16793  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 116951 - 116869
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataa 116869  T

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Target: scaffold0461 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 8 - 90
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataa 90  T

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Target: scaffold0146 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 13687 - 13605
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataa 207  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||| ||| ||||||| |||||||||| ||| | ||||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataa 13605  T

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Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 40526 - 40583
Alignment:
Q  120 caaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  40526 caaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 40583  T

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Target: scaffold0310 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 17699 - 17647
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||    
T  17699 ctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaa 17647  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 135529 - 135477
Alignment:
Q  125 ctaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  135529 ctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 135477  T

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Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 9467 - 9339
Alignment:
Q  49 agagaaagcaagagaaaccaagaacaagggggaaaaacttagg-agctgatttgctgtgt-taattcttcctacaaaactaaggtaagggtgagaccatc 146  Q
    |||| ||||||||||||||||||||||||||| | |||||||| | |||| ||||||||| |   |||  ||||||  |||||||||||||| ||  |||    
T  9467 agaggaagcaagagaaaccaagaacaaggggggagaacttaggaaactgaattgctgtgtctctgtct--ctacaattctaaggtaagggtgggattatc 9370  T
Q  147 tctcaataatcataatctataattcctgaaa 177  Q
    | |||||| ||||||| ||||||| ||||||    
T  9369 tttcaatagtcataatatataatttctgaaa 9339  T

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Target: scaffold0235 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 22594 - 22644
Alignment:
Q  127 aaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    |||||||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 22644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 1519 - 1450
Alignment:
Q  111 ttcttcctacaaaactaaggtaagggtgagaccatctctcaataatcataatctataattcctgaaattg 180  Q
    ||||| || ||||| ||||||||||||||||| | |||||||| ||| |||| ||||||| |||||||||    
T  1519 ttctttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaattg 1450  T

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Target: scaffold0124 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 34276 - 34327
Alignment:
Q  126 taaggtaagggtgagaccatctctcaataatcataatctataattcctgaaa 177  Q
    ||||||||||||||||| ||||||| ||||||||| | ||||||| ||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaa 34327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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